Patent application title: CHIMERIC HUMAN SWEET-UMAMI AND UMAMI-SWEET TASTE RECEPTORS
Inventors:
Xiaodong Li (San Diego, CA, US)
Feng Zhang (San Diego, CA, US)
Feng Zhang (San Diego, CA, US)
Hong Xu (San Diego, CA, US)
Qing Li (San Diego, CA, US)
Qing Li (San Diego, CA, US)
Assignees:
Senomyx, Inc.
IPC8 Class: AG01N33567FI
USPC Class:
435007200
Class name:
Publication date: 2010-12-02
Patent application number: 20100304402
Claims:
1. A hybrid taste receptor comprising the extracellular domain of one
human T1R or a portion thereof and the transmembrane domain of another
T1R or a portion thereof.
2. The hybrid receptor of claim 1 wherein both of said T1Rs are human or rodent.
3. The chimeric receptor of claim 1 wherein said T1Rs comprise T1R1 and T1R2.
4. The chimeric receptor of claim 3 wherein said T1R1 and T1R2 comprise human T1R1 and human T1R2.
5. The chimeric sweet-umami taste receptor identified as hT1R2-1 contained in SEQ ID NO:2.
6. The chimeric umami-sweet receptor identified as hT1R1-2 contained in SEQ ID NO:4.
7. A nucleic acid sequence encoding a chimeric taste receptor according to claim 1.
8. The nucleic acid sequence of claim 7 which is contained in SEQ ID NO:1.
9. The nucleic acid sequence of claim 7 which is contained in SEQ ID NO:3.
10. A cell which expresses a nucleic acid sequence as set forth in claim 7.
11. The cell of claim 10 wherein said nucleic acid sequence is contained in SEQ ID NO:1.
12. The cell of claim 10 wherein said nucleic acid sequence is contained in SEQ ID NO:3.
13. The cell of claim 10 which is selected from a bacterial cell, yeast cell, mammalian cell, oocyte, amphibian cell, avian cell and an insect cell.
14. The cell of claim 13 which is a mammalian cell or an oocyte.
15. The cell of claim 14 which is selected from a HEK-293 cell, CS cell, BHK cell, Monkey L cell, African Green monkey cell, CHO cell, LtK cell and an oocyte.
16. The cell of claim 15 which is an HEK-293 cell.
17. The cell of claim 10 which additionally expresses a G protein selected from the group consisting of a promiscuous G protein, Gq protein, transducin, Gi protein, gustducin, transducin and chimeras thereof.
18. The cell of claim 10 which additionally expresses a T1R3 sequence.
19. A heteromeric taste receptor comprising a chimeric taste receptor polypeptide according to claim 1 associated with another T1R polypeptide.
20. The heteromeric taste receptor of claim 19 wherein said another T1R polypeptide is a human T1R3 or rodent T1R3 polypeptide.
21. A cell which expresses the heteromeric taste receptor of claim 19.
22. A cell which expresses the heteromeric taste receptor of claim 20.
23. The cell of claim 21 which is a mammalian cell or an oocyte.
24. The cell of claim 22 which is a mammalian cell or an oocyte.
25. The cell of claim 23 which is selected from an HEK-293 cell, COS cell, CHO cell, BHK cell, Ltk cell, monkey L cell, African Green monkey cell, and an oocyte.
26. The cell of claim 24 which is selected from a HEK-293 cell, BHK cell, COS cell, CHO cell, Ltk cell, monkey L cell, African Green monkey cell, and an oocyte.
27. The cell of claim 25 which is a HEK-293 cell.
28. The cell of claim 26 which is a HEK-293 cell.
29. The cell of claim 19 which expresses a G protein.
30. The cell of claim 20 which expresses a G protein.
31. A chimeric taste receptor comprising a human T1R1 extracellular domain or a portion or variant thereof and a human T1R2 transmembrane domain or a portion or variant thereof.
32. A chimeric taste receptor comprising a rodent T1R1 extracellular domain or a portion or variant thereof and a rodent T1R2 transmembrane domain or a portion or variant thereof.
33. A chimeric taste receptor comprising a human T1R2 extracellular domain or a portion or variant thereof and a human T1R1 transmembrane domain or a portion or variant thereof.
34. A chimeric taste receptor comprising a rodent T1R2 extracellular domain or a portion or variant thereof and a rodent T1R1 transmembrane domain or a portion or variant thereof.
35. A nucleic acid sequence encoding a chimeric taste receptor according to claim 31.
36. A cell which stably expresses a nucleic acid sequence according to claim 35.
37. A cell which transiently expresses a nucleic acid sequence according to claim 35.
38. A screening assay for identifying a putative taste modulatory compound which comprises: (i) contacting a chimeric taste receptor according to claim 31 which optionally is associated with a T1R3 polypeptide or variant or fragment thereof with at least one putative taste modulatory compound: and (ii) detecting whether said compound specifically binds and/or modulates the activity of said chimeric taste receptor polypeptide.
39. The assay of claim 38 wherein a positive compound is further evaluated in human or animal taste tests to confirm its effect on taste.
40. The assay of claim 38 which comprises assaying the effect of said compound on the activation of said chimeric taste receptor by another compound in order to detect whether it functions as an enhancer.
41. The assay of claim 40 wherein said other compound is a sweet ligand.
42. The assay of claim 40 wherein said other compound is a umami ligand.
43. The assay of claim 40 wherein said chimeric receptor is preincubated with the putative taste modulator prior to contacting the chimeric taste receptor with a known activator of the chimeric taste receptor.
44. The assay of claim 43 wherein chimeric taste receptor is preincubated with the known activator of said chimeric taste receptor before assaying the effect of the putative taste modulatory compound.
45. The assay of claim 41 wherein said sweet ligand is a natural sweetener or artificial sweetener.
46. The assay of claim 38 wherein the chimeric receptor is contained on a cell membrane.
47. The assay of claim 38 wherein the chimeric taste receptor is expressed by a cell.
48. The assay of claim 47 wherein said cell is a mammalian cell or an oocyte.
49. The assay of claim 38 which is a fluorimetric assay.
50. The assay of claim 38 which is an electrophysiological assay.
51. The assay of claim 38 which is a binding assay.
52. The assay of claim 38 wherein the chimeric receptor is directly or indirectly covalently or non-covalently attached to a solid phase.
53. The assay of claim 38 which is a binding assay.
54. The assay of claim 53 which is a competitive binding assay.
55. The assay of claim 38 which detects the effect of said putative taste modulatory compound on an intracellular ion.
56. The assay of claim 55 wherein said ion is calcium.
57. The assay of claim 56 wherein the effect of said compound on calcium is detected using a membrane sensitive dye or a voltage sensitive dye.
58. The assay of claim 57 wherein the readout is fluorimetric.
59. The assay of claim 38 which detects the effect of said putative taste modulatory compound on ion polarization.
60. The assay of claim 38 which detects the effect of said compound on second messenger levels.
61. The assay of claim 60 wherein the second messenger is IP3.
62. The assay of claim 38 which detects the effect of said putative taste modulatory compound on intracellular cyclic nucleotides.
63. The assay of claim 62 wherein said nucleotides are cGMP or cAMP.
64. The assay of claim 38 which uses fluorimetric imaging.
65. The assay of claim 38 which detects the effect of said compound on G protein binding to GTPγS.
66. The assay of claim 38 which is used to detect umami enhancers.
67. The assay of claim 38 which is used to detect sweet enhancers.
Description:
RELATED APPLICATION
[0001] This application relates to and claims the benefit of priority to U.S. Provisional Application No. 60/728,324, filed Oct. 20, 2005. This application is incorporated by reference in its entirety herein.
FIELD OF THE INVENTION
[0002] This invention relates to novel chimeric human and rodent taste receptor polypeptides, nucleic acid sequences encoding, cells that express these chimeric taste receptor polypeptides and their use in identifying taste modulators, particularly modulators of sweet and umami taste.
BACKGROUND OF THE INVENTION
[0003] The human T1R family taste receptors include hT1R1, 2, and 3. The T1Rs belong to class-C G protein coupled receptors, and each Class-C GPCR consists of a large N-terminal extracellular domain and a C-terminal 7-transmembrane domain. It is generally known that hT1R1, and hT1R3 form a heteromeric receptor that modulates umami taste transduction and which recognizes umami tastants, while hT1R2 and hT1R3 form a heteromeric receptor that modulates sweet taste transduction and which recognizes sweet tastants. Therefore it is known that the umami taste receptor (hT1R1/hT1R3) and the sweet taste receptor (hT1R2/hT1R3) share a common subunit hT1R3.
BRIEF DESCRIPTION AND OBJECTS OF THE INVENTION
[0004] It is an object of the invention to produce chimeric taste receptor polypeptides that respond to umami and/or sweet taste stimuli and/or which enhance umami or sweet taste elicited by other compounds.
[0005] It is another object of the invention to use such chimeric taste receptor polypeptides in assays for identifying compounds that themselves modulate sweet or umami taste and/or which enhance sweet or umami taste elicited by other compounds.
[0006] More specifically it is an object of the invention to create a DNA fusion encoding a chimeric taste receptor by combining portions of the T1R1 and T1R2 taste receptor genes and to co-express same with a T1R3 taste receptor of the same or different species to create a chimeric taste receptor that responds to sweet and/or umami taste stimuli or which enhances umami or sweet taste elicited by other compounds.
[0007] Even more specifically it is an object of the invention to produce a chimeric taste receptor by combining all or a portion of the extracellular domains of a T1R1 polypeptide or a DNA encoding, preferably hT1R1 or mT1R1 or rT1R1 and all or a portion of the transmembrane domain of a T1R2 polypeptide or a DNA encoding, preferably hT1R2, rT1R2 or mT1R2 or a portion thereof to create a umami-sweet chimeric taste receptor polypeptide or a DNA encoding.
[0008] Also more specifically it is an object of the invention to produce a chimeric taste receptor by combining all or a portion of the extracellular domains of a T1R2 polypeptide or a DNA encoding, preferably hT1R2, rT1R2 or mT1R2, and all or a portion of the transmembrane domains of a T1R1 polypeptide or a DNA encoding, preferably hT1R1, mT1R1 or rT1R1 to create a chimeric sweet-umami taste receptor polypeptide or a DNA encoding.
[0009] It is another object of the invention to provide the specific hT1R1-2 and hT1R2-1 nucleic acid sequences and polypeptide sequences contained in SEQ ID NO:1-4.
[0010] It is another object of the invention to express these nucleic acid sequences encoding chimeric taste receptors in suitable host cells, preferably HEK-293 cells, that additionally preferably express a G protein and a T1R3 nucleic acid sequence.
[0011] It is another object of the invention to use these cells in assays for identifying molecules that modulate sweet or umami taste, e.g., umami and sweet tasting ligands and umami and sweet enhancers.
BRIEF DESCRIPTION OF THE FIGURES
[0012] FIG. 1 contains the nucleic acid sequence of a chimeric sweet-umami taste receptor according to the invention designated hT1R2-1 comprising the extracellular domain of human T1R2 fused to the transmembrane of human T1R1 (SEQ ID NO:1)
[0013] FIG. 2 contains the polypeptide sequence of a chimeric sweet-umami taste receptor polypeptide according to the invention designated hT1R2-1 comprising the extracellular portion of human T1R2 and the transmembrane portion of human T1R1 (SEQ ID NO:2).
[0014] FIG. 3 contains the nucleic acid sequence of a chimeric taste receptor according to the invention designated hT1R1-2 containing the extracellular domains of hT1R1 and the transmembrane domains of hT1R2. (SEQ ID NO:3)
[0015] FIG. 4 contains the polypeptide sequence of a chimeric receptor according to the invention designated hT1R1-2 (SEQ ID NO:4) and contains the contains the protein sequence of a chimeric G protein G16gust44 used in the present invention containing the N-terminal portion of Galpha16 fused to the 44 carboxy terminal amino acids of gustducin (SEQ ID NO:5).
[0016] FIG. 5 contains schematics for native T1R2/T13, T1R1/T1R3, and chimeric sweet-umami hT1R2-1/T1R3 and chimeric umami-sweet hT1R1-2/T1R3.
[0017] FIG. 6 contains the nucleic acid sequences and protein sequences for human and murine and rat T1R1, T1R2 and T1R3 (SEQ ID NO:6-17)
[0018] FIG. 7 contains the results of calcium imaging experiments using HEK-293 cells that express the chimeric hT1R2-1 receptor in FIG. 1 that show that this chimeric taste receptor responds to all sweeteners tested (sucrose, fructose, D-Trp, Acek, Dulcin), except for cyclamate.
[0019] FIG. 8 contains experimental results comparing effective concentrations (EC50s) of different sweeteners activating the native hT1R2/hT1R3 receptor in comparison to chimeric hT1R2-1 (SEQ ID) NO:2).
[0020] FIG. 9 contains the results of an experiment that shows that cyclamate enhances the aspartame response in a HEK-293 cell line that stably expresses the subject chimeric hT1R2-1 an unmodified hT1R3 sequence.
[0021] FIG. 10 contains an experiment that shows that cyclamate enhances the D-tryptophan response in a stable HEK-293 cell line that expresses hT1R2-1 chimeric taste receptor and an unmodified hT1R3 sequence.
[0022] FIG. 11 contains an experiment that shows that cyclamate enhances the sucrose response in a stable cell line that expresses the subject hT1R2-1 chimeric taste receptor and an unmodified hT1R3 sequence.
[0023] FIG. 12 contains an experiment that shows that cyclamate enhances the fructose response in a stable HEK-293 cell line that expresses the subject chimeric receptor hT1R2-1 and an unmodified hT1R3 sequence.
[0024] FIG. 13 contains an experiment showing that cyclamate enhances the response elicited by a proprietary umami agonist compound (designated '807) in a stable HEK-293 cell line that expresses the subject chimeric receptor hT1R2-1 and an unmodified hT1R3 sequence and that the umami compound '807 activates the chimeric hT1R2-1 taste receptor.
[0025] FIG. 14 contains an experiment showing that a proprietary umami ligand agonist compound '807 enhances the aspartame response in a stable HEK-293 cell line expressing hT1R2-1 and hT1R3.
[0026] FIG. 15 contains an experiment that shows the responses of stable HEK-293 cell line that expresses the chimeric receptor hT1R1-2 (SEQ ID NO:3) and the rT1R3 receptor and shows that this chimeric receptor responds to the umami ligands L-Glu, L-Asp, and L-AP4 and that the responses were enhanced by the presence of IMP or GMP.
[0027] FIG. 16 shows that the activation of the chimeric hT1R1-2/rT1R3 receptor according to the invention by MSG is enhanced by IMP.
DETAILED DESCRIPTION OF THE INVENTION
[0028] Prior to specifically describing the invention, the following definitions are provided.
[0029] The term "T1R" family includes polymorphic variants, alleles, mutants, and homologs that: (1) have about 30-40% amino acid sequence identity, more specifically about 40, 50, 60, 70, 75, 80, 85, 90, 95, 96, 97, 98, or 99% amino acid sequence identity to the T1Rs disclosed infra, and in the Zuker (Id) (2001) and Adler (Id.) (2001) applications incorporated, by reference herein over a window of about 25 amino acids, optimally 50-100 amino acids; (2) specifically bind to antibodies raised against an immunogen comprising an amino acid sequence selected from the group consisting of the T1R sequences disclosed infra, and conservatively modified variants thereof; (3) specifically hybridize (with a size of at least about 100, optionally at least about 500-1000 nucleotides) under stringent hybridization conditions to a sequence selected from the group consisting of the T21 DNA sequences disclosed infra, and conservatively modified variants thereof; (4) comprise a sequence at least about 40% identical to an amino acid sequence selected from the group consisting of the T1R amino acid sequences disclosed infra or (5) are amplified by primers that specifically hybridize under stringent hybridization conditions to the described T1R sequences.
[0030] In particular, these "T1R's" include taste receptor GPCRs referred to as hT1R1, hT1R2, hT1R3, rT1R1, rT1R2, rT1R3, mT1R1, mT1R2, and mT1R3 having the nucleic acid sequences and amino acid sequences provided in this application, and variants, alleles, mutants, orthologs and chimeras thereof which specifically bind and/or respond to sweet or umami ligands including activators, inhibitors and enhancers. Preferably, the T1Rs herein are chimeric sequences derived from portions of a T1R1 polypeptide and a T1R2 polypeptide or their corresponding DNA coding sequences. As exemplified herein, preferred chimeric T1Rs according to the invention comprise the extracellular region of one T1R, i.e., T1R1 or T1R2 and the transmembrane region of another T1R, either T1R1 or T1R2.
[0031] Topologically, certain chemosensory GPCRs have an "N-terminal domain;" "extracellular domains," a "transmembrane domain" comprising seven transmembrane regions, and corresponding cytoplasmic and extracellular loops, "cytoplasmic regions," and a "C-terminal region" (see, e.g., Hoon et al, Cell, 96:541-51 (1999); Buck & Axel, Cell, 65:175-87 (1991)). These regions can be structurally identified using methods known to those of skill in the art, such as sequence analysis programs that identify hydrophobic and hydrophilic domains (see, e.g., Stryer, Biochemistry, (3rd ed. 1988); see also any of a number of Internet based sequence analysis programs, such as those found at dot.imgen.bcm.tmc.edu). These regions are useful for making chimeric proteins and for in vitro assays of the invention, e.g., ligand binding assays.
[0032] "Extracellular domains" therefore refers to the domains of T1R polypeptides that protrude from the cellular membrane and are exposed to the extracellular face of the cell. Such regions would include the "N-terminal domain" that is exposed to the extracellular face of the cell, as well as the extracellular loops of the transmembrane domain that are exposed to the extracellular face of the cell, i.e., the extracellular loops between transmembrane regions 2 and 3, transmembrane regions 4 and 5, and transmembrane regions 6 and 7. The "N-terminal domain" starts at the N-terminus and extends to a region close to the start of the transmembrane region. These extracellular regions are useful for in vitro ligand binding assays, both soluble and solid phase. In addition, transmembrane regions, described below, can also be involved in ligand binding, either in combination with the extracellular region or alone, and are therefore also useful for in vitro ligand binding assays. The extracellular regions or domains of human, rat and murine T1R1, T1R2 and T1R3 are contained in FIG. 6.
[0033] "Transmembrane domain," which comprises the seven transmembrane "regions," refers to the domain of T1R polypeptides that lies within the plasma membrane, and may also include the corresponding cytoplasmic (intracellular) and extracellular loops, also referred to as transmembrane "regions." The seven transmembrane regions and extracellular and cytoplasmic loops can be identified using standard methods, as described in Kyte & Doolittle, J. Mol. Biol., 157:105-32 (1982)), or in Stryer, supra. The transmembrane domains or regions of human, rat, and murine T1R1, T1R2 and T1R3 are also contained in FIG. 6.
[0034] "Cytoplasmic domains" refers to the domains of T1R proteins that face the inside of the cell, e.g., the "C-terminal domain" and the intracellular loops of the transmembrane domain, e.g., the intracellular loops between transmembrane regions 1 and 2, transmembrane regions 3 and 4, and transmembrane regions 5 and 6. "C-terminal domain" refers to the region that spans from the end of the last transmembrane region to the C-terminus of the protein, and which is normally located within the cytoplasm.
[0035] The term "7-transmembrane receptor" means a polypeptide belonging to a superfamily of transmembrane proteins that have seven regions that span the plasma membrane seven times (thus, the seven regions are called "transmembrane" or "TM" domains TM I to TM VII).
[0036] The term "ligand-binding region" refers to sequences derived from a chemosensory or taste receptor that substantially incorporates transmembrane domains II to VII (TM II to VII). The region may be capable of binding a ligand, and more particularly, a taste eliciting compound.
[0037] The term "plasma membrane translocation domain" or simply "translocation domain" means a polypeptide domain that when incorporated into the amino terminus of a polypeptide coding sequence, can with great efficiency "chaperone" or "translocate" the hybrid ("fusion") protein to the cell plasma membrane. An exemplary "translocation domain" is derived from the amino terminus of the human rhodopsin receptor polypeptide, a 7-transmembrane receptor. Another translocation domain is known is the bovine rhodopsin sequence and is also useful for facilitating translocation. Rhodopsin derived sequences are particularly efficient in translocating 7-transmembrane fusion proteins to the plasma membrane.
[0038] The phrase "functional effects" in the context of assays for testing compounds that modulate T1R family member mediated taste transduction includes the determination of any parameter that is indirectly or directly under the influence of the receptor, e.g., functional, physical and chemical effects. It includes ligand binding, changes in ion flux, membrane potential, current flow, transcription, G protein binding, GPCR phosphorylation or dephosphorylation, signal transduction, receptor-ligand interactions, second messenger concentrations (e.g., cAMP, cGMP, IP3, or intracellular Ca2+), in vitro, in vivo, and ex vivo and also includes other physiologic effects such increases or decreases of neurotransmitter or hormone release.
[0039] By "determining the functional effect" is meant assays for a compound that increases or decreases a parameter that is indirectly or directly under the influence of a T1R family member, e.g., functional, physical and chemical effects. Such functional effects can be measured by any means known to those skilled in the art, e.g., changes in spectroscopic characteristics (e.g., fluorescence, absorbance, refractive index), hydrodynamic (e.g., shape), chromatographic, or solubility properties, patch clamping, voltage-sensitive dyes, whole cell currents, radioisotope efflux, inducible markers, oocyte T1R gene expression; tissue culture cell T1R expression; transcriptional activation of T1R genes; ligand binding assays; voltage, membrane potential and conductance changes; ion flux assays; changes in intracellular second messengers such as cAMP, cGMP, and inositol triphosphate (IP3); changes in intracellular calcium levels; neurotransmitter release, and the like.
[0040] "Inhibitors," "activators," and "modulators" of T1R proteins receptors are used interchangeably to refer to inhibitory, activating, or modulating molecules identified using in vitro and in vivo assays for taste transduction, e.g., ligands, agonists, antagonists, and their homologs and mimetics. Inhibitors are compounds that, e.g., bind to, partially or totally block stimulation, decrease, prevent, delay activation, inactivate, desensitize, or down regulate taste transduction, e.g., antagonists. Activators are compounds that, e.g., bind to, stimulate, increase, open, activate, facilitate, enhance activation, sensitize, or up regulate taste transduction, e.g., agonists. Modulators include compounds that, e.g., alter the interaction of a receptor with extracellular proteins that bind activators or inhibitor; G Proteins; kinases (e.g., homologs of rhodopsin kinase and beta adrenergic receptor kinases that are involved in deactivation and desensitization of a receptor); and arrestins, which also deactivate and desensitize receptors. Modulators include genetically modified versions of T1R family members, e.g., with altered activity, as well as naturally occurring and synthetic ligands, antagonists, agonists, small chemical molecules and the like. In the present invention this includes in particular sweet ligands (agonists or antagonists), umami ligands (agonists and antagonists), sweet enhancers and umami enhancers and sweet taste or umami taste inhibitors.
[0041] Such assays for inhibitors and activators include, e.g., expressing T1R family members in cells or cell membranes, applying putative modulator compounds in the presence or absence of compounds that modulate, e.g., sweet and umami compounds, and then determining the functional effects on taste transduction, as described above. Samples or assays comprising T1R family members that are treated with a potential activator, inhibitor, or modulator are compared to control samples without the inhibitor, activator, or modulator to examine the extent of modulation. Control samples (untreated with modulators) are assigned a relative T1R activity value of 100%. Inhibition of a T1R is achieved when the T1R activity value relative to the control is about 80%, optionally 50% or 25-0%. Activation of a T1R is achieved when the T1R activity value relative to the control is 110%, optionally 150%, optionally 200-500%, or 1000-3000% higher. In the present invention these assays will use chimeric T1Rs that comprise all or a portion of the extracellular portion of T1R1 or T1R2 and all or a portion of the transmembrane domains of another T1R , i.e., T1R2 or T1R1.
[0042] The terms "purified," "substantially purified," and "isolated" as used herein refer to the state of being free of other, dissimilar compounds with which the compound of the invention is normally associated in its natural state. Preferably, "purified," "substantially purified," and "isolated" means that the composition comprises at least 0.5%, 1%, 5%, 10%, or 20%, and most preferably at least 50% or 75% of the mass, by weight, of a given sample. In one preferred embodiment, these terms refer to the compound of the invention comprising at least 95% of the mass, by weight, of a given sample. As used herein, the terms "purified," "substantially purified," and "isolated", when referring to a nucleic acid or protein, of nucleic acids or proteins, also refers to a state of purification or concentration different than that which occurs naturally in the mammalian, especially human, body. Any degree of purification or concentration greater than that which occurs naturally in the mammalian, especially human, body, including (1) the purification from other associated structures or compounds or (2) the association with structures or compounds to which it is not normally associated in the mammalian, especially human, body, are within the meaning of "isolated." The nucleic acid or protein or classes of nucleic acids or proteins, described herein, may be isolated, or otherwise associated with structures or compounds to which they are not normally associated in nature, according to a variety of methods and processes known to those of skill in the art.
[0043] As used herein, the term "isolated," when referring to a nucleic acid or polypeptide refers to a state of purification or concentration different than that which occurs naturally in the mammalian, especially human, body. Any degree of purification or concentration greater than that which occurs naturally in the body, including (1) the purification from other naturally-occurring associated structures or compounds, or (2) the association with structures or compounds to which it is not normally associated in the body are within the meaning of "isolated" as used herein. The nucleic acids or polypeptides described herein may be isolated or otherwise associated with structures or compounds to which they are not normally associated in nature, according to a variety of methods and processed known to those of skill in the art.
[0044] As used herein, the terms "amplifying" and "amplification" refer to the use of any suitable amplification methodology for generating or detecting recombinant or naturally expressed nucleic acid, as described in detail, below. For example, the invention provides methods and reagents (e.g., specific oligonucleotide primer pairs) for amplifying (e.g., by polymerase chain reaction, PCR) naturally expressed (e.g., genomic or mRNA) or recombinant (e.g., cDNA) nucleic acids of the invention (e.g., taste eliciting compound-binding sequences of the invention) in vivo or in vitro.
[0045] The term "expression vector" refers to any recombinant expression system for the purpose of expressing a nucleic acid sequence of the invention in vitro or in vivo, constitutively or inducibly, in any cell, including prokaryotic, yeast, fungal, plant, insect or mammalian cell. The term includes linear or circular expression systems. The term includes expression systems that remain episomal or integrate into the host cell genome. The expression systems can have the ability to self-replicate or not, i.e., drive only transient expression in a cell. The term includes recombinant expression "cassettes which contain only the minimum elements needed for transcription of the recombinant nucleic acid.
[0046] The term "library" means a preparation that is a mixture of different nucleic acid or poly-peptide molecules, such as the library of recombinant generated sensory, particularly taste receptor ligand-binding regions generated by amplification of nucleic acid with degenerate primer pairs, or an isolated collection of vectors that incorporate the amplified ligand-binding regions, or a mixture of cells each randomly transfected with at least one vector encoding an taste receptor.
[0047] The term "nucleic acid" or "nucleic acid sequence" refers to a deoxy-ribonucleotide or ribonucleotide oligonucleotide in either single- or double-stranded form. The term encompasses nucleic acids, i.e., oligonucleotides, containing known analogs of natural nucleotides. The term also encompasses nucleic-acid-like structures with synthetic backbones.
[0048] Unless otherwise indicated, a particular nucleic acid sequence also implicitly encompasses conservatively modified variants thereof (e.g., degenerate codon substitutions) and complementary sequences, as well as the sequence explicitly indicated. Specifically, degenerate codon substitutions may be achieved by generating, e.g., sequences in which the third position of one or more selected codons is substituted with mixed-base and/or deoxyinosine residues (Batzer et al., Nucleic Acid Res., 19:5081 (1991); Ohtsuka et al., J. Biol. Chem., 260:2605-08 (1985); Rossolini et al., Mol. Cell. Probes, 8:91-98 (1994)). The term nucleic acid is used interchangeably with gene, cDNA, mRNA, oligonucleotide, and polynucleotide.
[0049] The terms "polypeptide," "peptide" and "protein" are used interchangeably herein to refer to a polymer of amino acid residues. The terms apply to amino acid polymers in which one or more amino acid residue is an artificial chemical mimetic of a corresponding naturally occurring amino acid, as well as to naturally occurring amino acid polymers and non-naturally occurring amino acid polymer.
[0050] The "translocation domain," "ligand-binding region", and chimeric receptors compositions described herein also include "analogs," or "conservative variants" and "mimetics" ("peptidomimetics") with structures and activity that substantially correspond to the exemplary sequences. Thus, the terms "conservative variant" or "analog" or "mimetic" refer to a polypeptide which has a modified amino acid sequence, such that the change(s) do not substantially alter the polypeptide's (the conservative variant's) structure and/or activity, as defined herein. These include conservatively modified variations of an amino acid sequence, i.e., amino acid substitutions, additions or deletions of those residues that are not critical for protein activity, or substitution of amino acids with residues having similar properties (e.g., acidic, basic, positively or negatively charged, polar or non-polar, etc.) such that the substitutions of even critical amino acids does not substantially alter structure and/or activity.
[0051] More particularly, "conservatively modified variants" applies to both amino acid and nucleic acid sequences. With respect to particular nucleic acid sequences, conservatively modified variants refers to those nucleic acids which encode identical or essentially identical amino acid sequences, or where the nucleic acid does not encode an amino acid sequence, to essentially identical sequences. Because of the degeneracy of the genetic code, a large number of functionally identical nucleic acids encode any given protein.
[0052] For instance, the codons GCA, GCC, GCG and GCU all encode the amino acid alanine. Thus, at every position where an alanine is specified by a codon, the codon can be altered to any of the corresponding codons described without altering the encoded polypeptide.
[0053] Such nucleic acid variations are "silent variations," which are one species of conservatively modified variations. Every nucleic acid sequence herein which encodes a polypeptide also describes every possible silent variation of the nucleic acid. One of skill will recognize that each codon in a nucleic acid (except AUG, which is ordinarily the only codon for methionine, and TGG, which is ordinarily the only codon for tryptophan) can be modified to yield a functionally identical molecule. Accordingly, each silent variation of a nucleic acid which encodes a polypeptide is implicit in each described sequence.
[0054] Conservative substitution tables providing functionally similar amino acids are well known in the art. For example, one exemplary guideline to select conservative substitutions includes (original residue followed by exemplary substitution): ala/gly or ser; arg/lys; asn/gln or his; asp/glu; cys/ser; gln/asn; gly/asp; gly/ala or pro; his/asn or gln; ile/leu or val; leu/ile or val; lys/arg or gln or glu; met/leu or tyr or ile; phe/met or leu or tyr; ser/thr; thr/ser; trp/tyr; tyr/trp or phe; val/ile or leu. An alternative exemplary guideline uses the following six groups, each containing amino acids that are conservative substitutions for one another: 1) Alanine (A), Serine (S), Threonine (T); 2) Aspartic acid (D), Glutamic acid (E); 3) Asparagine (N), Glutamine (Q); 4) Arginine (R), Lysine (I); 5) Isoleucine (I), Leucine (L), Methionine (M), Valine (V); and 6) Phenylalanine (F), Tyrosine (Y), Tryptophan (W); (see also, e.g., Creighton, Proteins, W. H. Freeman and Company (1984); Schultz and Schimer, Principles of Protein Structure, Springer-Verlag (1979)). One of skill in the art will appreciate that the above-identified substitutions are not the only possible conservative substitutions. For example, for some purposes, one may regard all charged amino acids as conservative substitutions for each other whether they are positive or negative. In addition, individual substitutions, deletions or additions that alter, add or delete a single amino acid or a small percentage of amino acids in an encoded sequence can also be considered "conservatively modified variations."
[0055] The terms "mimetic" and "peptidomimetic" refer to a synthetic chemical compound that has substantially the same structural and/or functional characteristics of the polypeptides, e.g., translocation domains, ligand-binding regions, or chimeric receptors of the invention. The mimetic can be either entirely composed of synthetic, non-natural analogs of amino acids, or may be a chimeric molecule of partly natural peptide amino acids and partly non-natural analogs of amino acids. The mimetic can also incorporate any amount of natural amino acid conservative substitutions as long as such substitutions also do not substantially alter the mimetic's structure and/or activity.
[0056] As with polypeptides of the invention which are conservative variants, routine experimentation will determine whether a mimetic is within the scope of the invention, i.e., that its structure and/or function is not substantially altered. Polypeptide mimetic compositions can contain any combination of non-natural structural components, which are typically from three structural groups: a) residue linkage groups other than the natural amide bond ("peptide bond") linkages; b) non-natural residues in place of naturally occurring amino acid residues; or c) residues which induce secondary structural mimicry, i.e., to induce or stabilize a secondary structure, e.g., a beta turn, gamma turn, beta sheet, alpha helix conformation, and the like. A polypeptide can be characterized as a mimetic when all or some of its residues are joined by chemical means other than natural peptide bonds. Individual peptidomimetic residues can be joined by peptide bonds, other chemical bonds or coupling means, such as, e.g., glutaraldehyde, N-hydroxysuccinimide esters, bifunctional maleimides, N,N'-dicyclohexylcarbodiimide (DCC) or N,N'-diisopropylcarbodiimide (DIC). Linking groups that can be an alternative to the traditional amide bond ("peptide bond") linkages include, e.g., ketomethylene (e.g., --C═O)--CH2 for --C(.═O)--NH--), aminomethylene (CH2NH), ethylene, olefin (CH═CH), ether (CH2O), thioether (CH2--S), tetrazole (CN4), thiazole, retroamide, thioamide, or ester (see, e.g., Spatola, Chemistry and Biochemistry of Amino Acids, Peptides and Proteins, Vol. 7, 267-357, Marcell Dekker, Peptide Backbone Modifications, NY (1983)). A polypeptide can also be characterized as a mimetic by containing all or some non-natural residues in place of naturally occurring amino acid residues; non-natural residues are well described in the scientific and patent literature.
[0057] A "label" or a "detectable moiety" is a composition detectable by spectroscopic, photochemical, biochemical, immunochemical, or chemical means. For example, useful labels include 32P, fluorescent dyes, electron-dense reagents, enzymes (e.g., as commonly used in an ELISA), biotin, digoxigenin, or haptens and proteins which can be made detectable, e.g., by incorporating a radiolabel into the peptide or used to detect antibodies specifically reactive with the peptide.
[0058] A "labeled nucleic acid probe or oligonucleotide" is one that is bound, either covalently, through a linker or a chemical bond, or noncovalently, through ionic, van der Waals, electrostatic, or hydrogen bonds to a label such that the presence of the probe may be detected by detecting the presence of the label bound to the probe.
[0059] As used herein a "nucleic acid probe or oligonucleotide" is defined as a nucleic acid capable of binding to a target nucleic acid of complementary sequence through one or more types of chemical bonds, usually through complementary base pairing, usually through hydrogen bond formation. As used herein, a probe may include natural (i.e., A, G, C, or T) or modified bases (7-deazaguanosine, inosine, etc.). In addition, the bases in a probe may be joined by a linkage other than a phosphodiester bond, so long as it does not interfere with hybridization. Thus, for example, probes may be peptide nucleic acids in which the constituent bases are joined by peptide bonds rather than phosphodiester linkages. It will be understood by one of skill in the art that probes may bind target sequences lacking complete complementarity with the probe sequence depending upon the stringency of the hybridization conditions. The probes are optionally directly labeled as with isotopes, chromophores, lumiphores, chromogens, or indirectly labeled such as with biotin to which a streptavidin complex may later bind. By assaying for the presence or absence of the probe, one can detect the presence or absence of the select sequence or subsequence.
[0060] The term "heterologous" when used with reference to portions of a nucleic acid indicates that the nucleic acid comprises two or more subsequences that are not found in the same relationship to each other in nature. For instance, the nucleic acid is typically recombinantly produced, having two or more sequences from unrelated genes arranged to make a new functional nucleic acid, e.g., a promoter from one source and a coding region from another source. Similarly, a heterologous protein indicates that the protein comprises two or more subsequences that are not found in the same relationship to each other in nature (e.g., a fusion protein).
[0061] A "promoter" is defined as an array of nucleic acid sequences that direct transcription of a nucleic acid. As used herein, a promoter includes necessary nucleic acid sequences near the start site of transcription, such as, in the case of a polymerase 11 type promoter, a TATA element. A promoter also optionally includes distal enhancer or repressor elements, which can be located as much as several thousand base pairs from the start site of transcription. A "constitutive" promoter is a promoter that is active under most environmental and developmental conditions. An "inducible" promoter is a promoter that is active under environmental or developmental regulation. The term "operably linked" refers to a functional linkage between a nucleic acid expression control sequence (such as a promoter, or array of transcription factor binding sites) and a second nucleic acid sequence, wherein the expression control sequence directs transcription of the nucleic acid corresponding to the second sequence.
[0062] As used herein, "recombinant" refers to a polynucleotide synthesized or otherwise manipulated in vitro (e.g., "recombinant polynucleotide"), to methods of using recombinant polynucleotides to produce gene products in cells or other biological systems, or to a polypeptide ("recombinant protein") encoded by a recombinant polynucleotide. "Recombinant means" also encompass the ligation of nucleic acids having various coding regions or domains or promoter sequences from different sources into an expression cassette or vector for expression of, e.g., inducible or constitutive expression of a fusion protein comprising a translocation domain of the invention and a nucleic acid sequence amplified using a primer of the invention.
[0063] The phrase "selectively (or specifically) hybridizes to" refers to the binding, duplexing, or hybridizing of a molecule only to a particular nucleotide sequence under stringent hybridization conditions when that sequence is present in a complex mixture (e.g., total cellular or library DNA or RNA).
[0064] The phrase "stringent hybridization conditions" refers to conditions under which a probe will hybridize to its target subsequence, typically in a complex mixture of nucleic acid, but to no other sequences. Stringent conditions are sequence dependent and will be different in different circumstances. Longer sequences hybridize specifically at higher temperatures. An extensive guide to the hybridization of nucleic acids is found in Tijssen, Techniques in Biochemistry and Molecular Biology--Hybridization with Nucleic Probes, "Overview of principles of hybridization and the strategy of nucleic acid assays" (1993). Generally, stringent conditions are selected to be about 5-10° C. lower than the thermal melting point (Tm) for the specific sequence at a defined ionic strength pH. The Tm is the temperature (under defined ionic strength, pH, and nucleic concentration) at which 50% of the probes complementary to the target hybridize to the target sequence at equilibrium (as the target sequences are present in excess, at Tm, 50% of the probes are occupied at equilibrium). Stringent conditions will be those in which the salt concentration is less than about 1.0 M sodium ion, typically about 0.01 to 1.0 M sodium ion concentration (or other salts) at pH 7.0 to 8.3 and the temperature is at least about 30° C. for short probes (e.g., 10 to 50 nucleotides) and at least about 60° C. for long probes (e.g., greater than 50 nucleotides). Stringent conditions may also be achieved with the addition of destabilizing agents such as formamide. For selective or specific hybridization, a positive signal is at least two times background, optionally 10 times background hybridization. Exemplary stringent hybridization conditions can be as following: 50% formamide, 5×SSC, and 1% SDS, incubating at 42° C., or, 5×SSC, 1% SDS, incubating at 65° C., with wash in 0.2×SSC, and 0. 1% SDS at 65° C. Such hybridizations and wash steps can be carried out for, e.g., 1, 2, 5, 10, 15, 30, 60; or more minutes.
[0065] Nucleic acids that do not hybridize to each other under stringent conditions are still substantially related if the polypeptides which they encode are substantially related. This occurs, for example, when a copy of a nucleic acid is created using the maximum codon degeneracy permitted by the genetic code. In such cases, the nucleic acids typically hybridize under moderately stringent hybridization conditions. Exemplary "moderately stringent hybridization conditions" include a hybridization in a buffer of 40% formamide, 1 M NaCl, 1% SDS at 37° C., and a wash in 1×SSC at 45° C. Such hybridizations and wash steps can be carried out for, e.g., 1, 2, 5, 10, 15, 30, 60, or more minutes. A positive hybridization is at least twice background. Those of ordinary skill will readily recognize that alternative hybridization and wash conditions can be utilized to provide conditions of similar stringency.
[0066] "Antibody" refers to a polypeptide comprising a framework region from an immunoglobulin gene or fragments thereof that specifically binds and recognizes an antigen. The recognized immunoglobulin genes include the kappa, lambda, alpha, gamma, delta, epsilon, and mu constant region genes, as well as the myriad immunoglobulin variable region genes. Light chains are classified as either kappa or lambda. Heavy chains are classified as gamma, mu, alpha, delta, or epsilon, which in turn define the immunoglobulin classes, IgG, IgM, IgA, IgD and IgE, respectively.
[0067] An exemplary immunoglobulin (antibody) structural unit comprises a tetramer. Each tetramer is composed of two identical pairs of polypeptide chains, each pair having one "light" (about 25 kDa) and one "heavy" chain (about 50-70 kDa). The N-terminus of each chain defines a variable region of about 100 to 110 or more amino acids primarily responsible for antigen recognition. The terms variable light chain (VL) and variable heavy chain (VH) refer to these light and heavy chains respectively.
[0068] A "chimeric antibody" is an antibody molecule in which (a) the constant region, or a portion thereof, is altered, replaced or exchanged so that the antigen binding site (variable region) is linked to a constant region of a different or altered class, effector function and/or species, or an entirely different molecule which confers new properties to the chimeric antibody, e.g., an enzyme, toxin, hormone, growth factor, drug, etc.; or (b) the variable region, or a portion thereof, is altered, replaced or exchanged with a variable region having a different or altered antigen specificity.
[0069] An "anti-T1R" antibody is an antibody or antibody fragment that specifically binds a polypeptide encoded by a T1R gene, cDNA, or a subsequence thereof.
[0070] The term "immunoassay" is an assay that uses an antibody to specifically bind an antigen. The immunoassay is characterized by the use of specific binding properties of a particular antibody to isolate, target, and/or quantify the antigen.
[0071] The phrase "specifically (or selectively) binds" to an antibody or, "specifically (or selectively) immunoreactive with," when referring to a protein or peptide, refers to a binding reaction that is determinative of the presence of the protein in a heterogeneous population of proteins and other biologics. Thus, under designated immunoassay conditions, the specified antibodies bind to a particular protein at least two times the background and do not substantially bind in a significant amount to other proteins present in the sample. Specific binding to an antibody under such conditions may require an antibody that is selected for its specificity for a particular protein.
[0072] For example, polyclonal antibodies raised to a T1R family member from specific species such as rat, mouse, or human can be selected to obtain only those polyclonal antibodies that are specifically immunoreactive with the T1R polypeptide or an immunogenic portion thereof and not with other proteins, except for orthologs or polymorphic variants and alleles of the T1R polypeptide. This selection may be achieved by subtracting out antibodies that cross-react with T1R molecules from other species or other T1R molecules. Antibodies can also be selected that recognize only T1R GPCR family members but not GPCRs from other families. A variety of immunoassay formats may be used to select antibodies specifically immunoreactive with a particular protein. For example, solid-phase ELISA immunoassays are routinely used to select antibodies specifically immunoreactive with a protein (see, e.g., Harlow & Lane, Antibodies, A Laboratory Manual, (1988), for a description of immunoassay formats and conditions that can be used to determine specific immunoreactivity). Typically a specific or selective reaction will be at least twice background signal or noise and more typically more than 10 to 100 times background.
[0073] The phrase "selectively associates with" refers to the ability of a nucleic acid to "selectively hybridize" with another as defined above, or the ability of an antibody to "selectively (or specifically) bind to a protein, as defined above.
[0074] The term "expression vector" refers to any recombinant expression system for the purpose of expressing a nucleic acid sequence of the invention in vitro or in vivo, constitutively or inducibly, in any cell, including prokaryotic, yeast, fungal, plant, insect or mammalian cell. The term includes linear or circular expression systems. The term includes expression systems that remain episomal or integrate into the host cell genome. The expression systems can have the ability to self-replicate or not, i.e., drive only transient expression in a cell. The term includes recombinant expression "cassettes which contain only the minimum elements needed for transcription of the recombinant nucleic acid.
[0075] By "host cell" is meant a cell that contains an expression vector and supports the replication or expression of the expression vector. Host cells may be prokaryotic cells such as E. coli, or eukaryotic cells such as yeast, insect, amphibian, or mammalian cells such as CHO, HeLa, HEK-293, and the like, e.g., cultured cells, explants, and cells in vivo.
[0076] Based on the foregoing, the subject invention relates to the discovery that chimeric receptors comprising portions of a T1R1 and a T1R2 of the same or different species can be constructed which when co-expressed with an intact or modified T1R3 sequence of the same or different species respond specifically to umami and/or sweet tasting compounds and that the activation of these chimeric taste receptors is enhanced by sweet or umami enhancer compounds. Therefore, these chimeric receptors may be used in assays to screen for sweet and umami ligands (tastants), as well as to screen for compounds that enhance or inhibit the sweet or umami taste elicited by other sweet or umami tasting compounds.
[0077] As shown in FIGS. 1-4, in order to establish the efficacy of the subject chimeric receptors in cell-based assays for identifying taste modulatory compounds the present inventors constructed chimeric taste receptors comprising portions of hT1R2 and hT1R1 named hT1R2-1, consisting of the hT1R2 N-terminal extracellular domain and the hT1R1 C-terminal 7-transmembrane domain and hT1R1-2 containing the hT1R1 extracellular domains and the hT1R2 C-terminal 7-transmembrane domain. When these chimeric receptors were co-expressed with a human or rodent T1R3 sequence in a HEK-293 cell line that stably expressed this chimeric receptor as well as a promiscuous chimeric G protein G16-t25 or G16g44 respectively comprising the N-terminal portion of Galpha16 and the 25 or 44 carboxy-terminal amino acids of transducin or gustducin, that the resultant chimeric sweet-umami chimeric receptor or chimeric umami-sweet taste rector was functional and responded specifically to sweet and/or umami ligand compounds and enhancers.
[0078] Particularly it was shown that hT1R2-1 (SEQ ID NO:1 and 2) responded specifically to both sweeteners and umami compounds and that the activity of this receptor is enhanced by a sweet agonist cyclamate and is activated by umami compounds designated '807 and '336 which also function as enhancers at lower concentrations. Also, it was shown that this chimeric receptor did not respond to IMP or MSG and also that IMP had no enhancer effect on the response elicited by other umami compounds. This suggests that the extracellular region of hT1R1 is not required for all umami compounds to interact with the umami receptor but that it does impact and is necessary for MSG and IMP interactions. Also, the results which show that cyclamate a sweet agonist of the native receptor behaves like an enhancer indicate that the compound may be interacting with a different portion of the taste receptor than when it interacts with the native sweet receptor.
[0079] Particularly, it was shown that hT1R1-2 (SEQ ID NO:3 and 4) responded to the umami compounds including L-glutamate, L-aspartate and L-AP4 and that the activity of this chimeric taste receptor is enhanced by the 5' nucleotides IMP and GMP. As noted, these results suggest that the extracellular portion of hT1R1 is involved in recognizing some umami ligands and their enhancers. By contrast, none of the tested sweet compounds which included carbohydrates, sweet amino acids and synthetic sweeteners activated hT1R1-2 (SEQ ID NO:3 and 4)
[0080] More specifically, the inventors generated stable HEK-293 cell lines that constitutively express hT1R2-1 or hT1R1-2 and a T1R3 sequence, i.e. hT1R3 or rT1R3, and a chimeric G protein G16-g44 which consists of the N-terminal portion of Galpha16 fused to the last 44 amino acids of gustducin or G16-t25 which consists of the N-terminal portion of Galpha16 and the last 25 codons replaced with codons encoding the C-terminal tail (last 25 amino acid residues) of transducin. Thus in the resultant chimeric G protein the last 25 amino acids of Galpha16 are replaced with the last 25 amino acid residues of the transducin protein sequence or the last 44 amino acids are derived from gustducin.
[0081] Using the stable HEK-293 cell line which expressed hT1R2-1 the inventors tested the effect of sweeteners including sucrose, fructose, D-tryptophan, aspartame, cyclamate, saccharin and dulcin. (FIG. 7) Except for cyclamate, all these sweeteners activated the hT1R2-1/hT1R3 chimeric receptor, indicating that the hT1R2 C-terminal 7-transmembrane domain is not required for the interaction of the sweet taste receptor (hT1R2/hT1R3) with these sweeteners. As shown in FIGS. 9-12 cyclamate enhanced the activation of this chimeric receptor by aspartame, D-tryptophan, sucrose, and fructose. As shown in FIG. 13, the proprietary umami ligand '807 induced the activity of this chimeric receptor, and this activity was further enhanced by cyclamate.
[0082] In additional experiments, the inventors also tested the effect of various umami tasting compounds and enhancers on this stable cell line including monosodium L-glutamate (MSG), IMP, '807 and '336 on the chimeric HT1R2-1 receptor. It was found that MSG or IMP had no effect on the chimeric sweet-umami taste receptor. Also, IMP had no enhancement effect on the activities of the receptor expressed in the stable cell line, indicating that the hT1R1 N-terminal extracellular domain is apparently required for MSG/IMP interaction with the umami taste receptor (hT1R1/hT1R3). It was also observed using the same stable HEK-293 cell line that two proprietary umami ligands, identified as '807 and '336 strongly activated the chimeric receptor. These results would suggest that the hT1R1 N-terminal domain is apparently not required for these compounds to interact with and activate the umami taste receptor.
[0083] The inventors tested the effect of cyclamate as an enhancer because cyclamate is a sweetener the inventors previously demonstrated to interact with the hT1R3 C-terminal 7-transmembrane domain. As mentioned, cyclamate which was previously found to be an agonist of the sweet taste receptor (hT1R2/hT1R3) and an enhancer of the umami taste receptor (hT1R1/hT1R3). Therefore, the inventors conducted experiments elucidating the effect of cyclamate on the response of the subject chimeric hT1R2-1 receptor to natural and synthetic sweet ligands including aspartame, D-tryptophan, sucrose, fructose, and on the effect of '807 and vice versa as well as the effect of '807 on aspartame response.
[0084] Particularly as shown in the FIGS. 9-12 it was observed that cyclamate enhanced the response of hT1R2-1 to various sweeteners (aspartame, D-tryptophan, sucrose, fructose) and it was observed that cyclamate alone did not activate the sweet-umami chimeric receptor (hT1R2-1/hT1R3), but enhanced its responses to the sweeteners and umami compounds '807 and '336 in the stable hT1R2-1/hT1R3 cell lines. These results suggest that cyclamate, an agonist of the sweet taste receptor (hT1R2/hT1R3), acts like an enhancer on the sweet-umami chimeric receptor (hT1R2-1/hT1R3).
[0085] As mentioned, '807 and '336 were shown to interact with the hT1R1 C-terminal transmembrane domain. Besides activating the sweet-umami chimeric receptor, 807 and 336 also was observed to enhance the chimeric sweet-umami taste receptor activities at lower concentrations.
[0086] As noted above, experiments were also conducted using HEK-293 cell lines that expressed the chimeric hT1R1-2 receptor, a chimeric G16gust44 protein, and a rat T1R3 sequence which revealed that this chimeric taste receptor responded to umami tasting compounds and that the activity thereof is enhanced by IMP and GMP.
[0087] Therefore, based on the foregoing, chimeric-sweet-umami chimeric receptor or chimeric umami-sweet taste receptors according to the invention and stable or transient cell lines which express these chimeric taste receptor can be used to identify sweet taste enhancers, umami taste enhancers, sweeteners, and umami tasting molecules. Also, these chimeric taste receptors and cell lines which express these chimeric taste receptors can be used in mapping and functional studies to determine at what residues sweet and umami ligands interact with their respective taste receptors. Also, these molecules can be used to elucidate the mechanism of the sweet and umami receptors' activation and enhancement of activation.
[0088] As discussed in further detail below, these hybrid receptors can be used in any of the screening assays disclosed in Applicants' earlier T1R related applications including U.S. Ser. No. 09/897,427 filed on Jul. 3, 2001 and U.S. Ser. No. 10/179,373 filed on Jun. 26, 2002. These patent applications and the references cited therein are incorporated by reference in their entirety herein. Additionally, as discussed below, these hybrid receptors can be expressed using any of the expression vectors, and cells disclosed herein. However, preferred cells for expression include cells typically used in GPCR assays such as HEK-293, CHO, COS, MDK, BHK, monkey L and (frog) oocytes.
[0089] In functional cell based assays such as those discussed below the chimeric receptor will preferably be expressed in association with a suitable G protein such as a promiscuous G protein such as Galpha15, Galpha16, transducin, gustducin, a Gq protein, a Gi protein or a chimeric G protein such as a chimeric protein derived from Galpha 16 and gustducin. Exemplified herein are chimeric G proteins derived from G16 and transducin or gustducin.
[0090] Also, it should be understood that while the application exemplifies specific sweet-umami and chimeric umami-sweet nucleic acid and protein sequences that the invention further contemplates variants thereof, e.g., nucleic acid sequences and polypeptides that poses at least 80% sequence identity therewith, more preferably at least 90% sequence identity therewith, and more typically from 95, 96, 97, 98, Or 99% sequence identity therewith. Similarly, these chimeric sequences may be expressed in association with wild-type or variant T1R3 sequences, i.e., variants which possess at least 80% sequence identity to human or rodent T1R3, more typically at least 90% sequence identity therewith, and even more typically at lest 95, 96, 97, 98 or 99% sequence identity therewith.
[0091] The taste modulatory effect of umami and sweet ligands and enhancers identified using the subject chimeric taste receptors will preferably be confirmed in human or animal taste tests. For example it will be confirmed that they modulate sweet or umami taste alone or in association with other compounds (sweet compound or umami tasting compound). These compounds may be used as flavor additives in various compositions including foods, beverages, medicaments and cosmetics.
[0092] Preferably, these assays will utilize a test cell that expresses a DNA encoding an hT1R having one of the amino acid sequences identified infra. However, it is anticipated that fragments, orthologs, variants or chimeras of these receptor polypeptides which retain the functional properties of these chimeric sweet-umami or umami-sweet taste receptors, i.e., respond to some sweet or umami compounds or enhancers thereof compounds, will also be useful in these assays. Examples of such variants include splice variants, single nucleotide polymorphisms, allelic variants, and mutations produced by recombinant or chemical means, or naturally occurring. Means for isolation and expression of T1Rs, which are used in the assays of the present invention and assays which are contemplated for use in the present invention to identify compounds that inhibit activation of these receptors, are set forth below.
Isolation and Expression of T1Rs
[0093] Isolation and expression of the T1Rs, or fragments or variants thereof, of the invention can be effected by well-established cloning procedures using probes or primers constructed based on the T1R nucleic acids sequences disclosed in the application. Related T1R sequences may also be identified from human or other species genomic databases using the sequences disclosed herein and known computer-based search technologies, e.g., BLAST sequence searching. In a particular embodiment, the pseudogenes disclosed herein can be used to identify functional alleles or related genes.
[0094] Expression vectors can then be used to infect or transfect host cells for the functional expression of these sequences. These genes and vectors can be made and expressed in vitro or in vivo. One of skill will recognize that desired phenotypes for altering and controlling nucleic acid expression can be obtained by modulating the expression or activity of the genes and nucleic acids (e.g., promoters, enhancers and the like) within the vectors of the invention. Any of the known methods described for increasing or decreasing expression or activity can be used. The invention can be practiced in conjunction with any method or protocol known in the art, which are well described in the scientific and patent literature.
[0095] Alternatively, these nucleic acids can be synthesized in vitro by well-known chemical synthesis techniques, as described in, e.g., Carruthers, Cold Spring Harbor Symp. Quant. Biol. 47:411-18 (1982); Adams, Am. Chem. Soc., 105:661 (1983); Belousov, Nucleic Acids Res. 25:3440-3444 (1997); Frenkel, Free Radic. Biol. Med. 19:373-380 (1995); Blommers, Biochemistry 33:7886-7896 (1994); Narang, Meth. Enzymol. 68:90 (1979); Brown, Meth. Enzymol. 68:109 (1979); Beaucage, Tetra. Lett. 22:1859 (1981); U.S. Pat. No. 4,458,066. Double-stranded DNA fragments may then be obtained either by synthesizing the complementary strand and annealing the strands together under appropriate conditions, or by adding the complementary strand using DNA polymerase with an appropriate primer sequence.
[0096] Techniques for the manipulation of nucleic acids, such as, for example, for generating mutations in sequences, subcloning, labeling probes, sequencing, hybridization and the like are well described in the scientific and patent literature. See, e.g., Sambrook, ed., Molecular Cloning: A Laboratory Manual (2nd ed.), Vols. 1-3, Cold Spring Harbor Laboratory (1989); Ausubel, ed., Current Protocols in Molecular Biology, John Wiley & Sons, Inc., New York (1997); Tijssen, ed., Laboratory Techniques in Biochemistry and Molecular Biology: Hybridization With Nucleic Acid Probes, Part I, Theory and Nucleic Acid Preparation, Elsevier, N.Y. (1993).
[0097] Nucleic acids, vectors, capsids, polypeptides, and the like can be analyzed and quantified by any of a number of general means well known to those of skill in the art. These include, e.g., analytical biochemical methods such as NMR, spectrophotometry, radiography, electrophoresis, capillary electrophoresis, high performance liquid chromatography (HPLC), thin layer chromatography (TLC), and hyperdiffusion chromatography, various immunological methods, e.g., fluid or gel precipitin reactions, immunodiffusion, immunoelectrophoresis, radioimmunoassays (RIAs), enzyme-linked immunosorbent assays (ELISAs), immunofluorescent assays, Southern analysis, Northern analysis, dot-blot analysis, gel electrophoresis (e.g., SDS-PAGE), RT-PCR, quantitative PCR, other nucleic acid or target or signal amplification methods, radiolabeling, scintillation counting, and affinity chromatography.
[0098] Oligonucleotide primers may be used to amplify nucleic acids encoding a T1R ligand-binding region. The nucleic acids described herein can also be cloned or measured quantitatively using amplification techniques. Amplification methods are also well known in the art, and include, e.g., polymerase chain reaction (PCR) (Innis ed., PCR Protocols, a Guide to Methods and Applications, Academic Press, N.Y. (1990); Innis ed., PCR Strategies, Academic Press, Inc., N.Y. (1995)); ligase chain reaction (LCR) (Wu, Genomics, 4:560 (1989); Landegren, Science, 241:1077 (1988); Barringer, Gene, 89:117 (1990)); transcription amplification (Kwoh, PNAS, 86:1173 (1989)); self-sustained sequence replication (Guatelli, PNAS, 87:1874 (1990)); Q Beta replicase amplification (Smith, J. Clin. Microbiol., 35:1477-91 (1997)); automated Q-beta replicase amplification assay (Burg, Mol. Cell. Probes, 10:257-71 (1996)); and other RNA polymerase mediated techniques (e.g., NASBA, Cangene, Mississauga, Ontario). See also, Berger, Methods Enzymol., 152:307-16 (1987); Sambrook; Ausubel; U.S. Pat. Nos. 4,683,195 and 4,683,202; Sooknanan, Biotechnology, 13:563-64 (1995).
[0099] Once amplified, the nucleic acids, either individually or as libraries, may be cloned according to methods known in the art, if desired, into any of a variety of vectors using routine molecular biological methods; methods for cloning in vitro amplified nucleic acids are described, e.g., U.S. Pat. No. 5,426,039. To facilitate cloning of amplified sequences, restriction enzyme sites can be "built into" the PCR primer pair. For example, Pst I and Bsp E1 sites were designed into the exemplary primer pairs of the invention. These particular restriction sites have a sequence that, when ligated, are "in-frame" with respect to the 7-membrane receptor "donor" coding sequence into which they are spliced (the ligand-binding region coding sequence is internal to the 7-membrane polypeptide, thus, if it is desired that the construct be translated downstream of a restriction enzyme splice site, out of frame results should be avoided; this may not be necessary if the inserted ligand-binding region comprises substantially most of the transmembrane VII region). The primers can be designed to retain the original sequence of the "donor" 7-membrane receptor. Alternatively, the primers can encode amino acid residues that are conservative substitutions (e.g., hydrophobic for hydrophobic residue, see above discussion) or functionally benign substitutions (e.g., do not prevent plasma membrane insertion, cause cleavage by peptidase, cause abnormal folding of receptor, and the like).
[0100] The primer pairs may be designed to selectively amplify ligand-binding regions of T1R proteins. These binding regions may vary for different ligands; thus, what may be a minimal binding region for one ligand, may be too limiting for a second potential ligand. Thus, binding regions of different sizes comprising different domain structures may be amplified; for example, transmembrane (TM) domains II through VII, III through VII, III through VI or II through VI, or variations thereof (e.g., only a subsequence of a particular domain, mixing the order of the domains, and the like), of a 7-transmembrane T1R.
[0101] As domain structures and sequence of many 7-membrane T1R proteins are known, the skilled artisan can readily select domain-flanking and internal domain sequences as model sequences to design degenerate amplification primer pairs. For example, a nucleic acid sequence encoding domain regions II through VII can be generated by PCR amplification using a primer pair. To amplify a nucleic acid comprising transmembrane domain I (TM I) sequence, a degenerate primer can be designed from a nucleic acid that encodes the amino acid sequence of the T1R family consensus sequence 1 described above. Such a degenerate primer can be used to generate a binding region incorporating TM I through TM III, TM I through TM IV, TM I through TM V, TM I through TM VI or TM I through TM VII). Other degenerate primers can be designed based on the other T1R family consensus sequences provided herein. Such a degenerate primer can be used to generate a binding region incorporating TM III through TM IV, TM III through TM V, TM III through TM VI or TM III through TM VII.
[0102] Paradigms to design degenerate primer pairs are well known in the art. For example, a COnsensus-DEgenerate Hybrid Oligonucleotide Primer (CODEHOP) strategy computer program is accessible as http://blocks.fhcrc.org/codehop.html, and is directly linked from the BlockMaker multiple sequence alignment site for hybrid primer prediction beginning with a set of related protein sequences, as known taste receptor ligand-binding regions (see, e.g., Rose, Nucleic Acids Res., 26:1628-35 (1998); Singh, Biotechniques, 24:318-19 (1998)).
[0103] Means to synthesize oligonucleotide primer pairs are well known in the art. "Natural" base pairs or synthetic base pairs can be used. For example, use of artificial nucleobases offers a versatile approach to manipulate primer sequence and generate a more complex mixture of amplification products. Various families of artificial nucleobases are capable of assuming multiple hydrogen bonding orientations through internal bond rotations to provide a means for degenerate molecular recognition. Incorporation of these analogs into a single position of a PCR primer allows for generation of a complex library of amplification products. See, e.g., Hoops, Nucleic Acids Res., 25:4866-71 (1997). Nonpolar molecules can also be used to mimic the shape of natural DNA bases. A non-hydrogen-bonding shape mimic for adenine can replicate efficiently and selectively against a nonpolar shape mimic for thymine (see, e.g., Morales, Nat. Struct. Biol., 5:950-54 (1998)). For example, two degenerate bases can be the pyrimidine base 6H, 8H-3,4-dihydropyrimido[4,5-c][1,2]oxazin-7-one or the purine base N6-methoxy-2,6-diaminopurine (see, e.g., Hill, PNAS, 95:4258-63 (1998)). Exemplary degenerate primers of the invention incorporate the nucleobase analog 5'-Dimethoxytrityl-N-benzoyl-2'-deoxy-Cytidine,3'-[(2-cyanoethyl)-- (N,N-diisopropyl)]-phosphoramidite (the term "P" in the sequences, see above). This pyrimidine analog hydrogen bonds with purines, including A and G residues.
[0104] Polymorphic variants, alleles, and interspecies homologs that are substantially identical to a taste receptor disclosed herein can be isolated using the nucleic acid probes described above. Alternatively, expression libraries can be used to clone T1R polypeptides and polymorphic variants, alleles, and interspecies homologs thereof, by detecting expressed homologs immunologically with antisera or purified antibodies made against a T1R polypeptide, which also recognize and selectively bind to the T1R homolog.
[0105] Nucleic acids that encode ligand-binding regions of taste receptors may be generated by amplification (e.g., PCR) of appropriate nucleic acid sequences using appropriate (perfect or degenerate) primer pairs. The amplified nucleic acid can be genomic DNA from any cell or tissue or mRNA or cDNA derived from taste receptor-expressing cells.
[0106] In one embodiment, hybrid protein-coding sequences comprising nucleic acids encoding chimeric or native T1Rs fused to a translocation sequences may be constructed. Also provided are hybrid T1Rs comprising the translocation motifs and taste eliciting compound-binding regions of other families of chemosensory receptors, particularly taste receptors. These nucleic acid sequences can be operably linked to transcriptional or translational control elements, e.g., transcription and translation initiation sequences, promoters and enhancers, transcription and translation terminators, polyadenylation sequences, and other sequences useful for transcribing DNA into RNA. In construction of recombinant expression cassettes, vectors, and transgenics, a promoter fragment can be employed to direct expression of the desired nucleic acid in all desired cells or tissues.
[0107] In another embodiment, fusion proteins may include C-terminal or N-terminal translocation sequences. Further, fusion proteins can comprise additional elements, e.g., for protein detection, purification, or other applications. Detection and purification facilitating domains include, e.g., metal chelating peptides such as polyhistidine tracts, histidine-tryptophan modules, or other domains that allow purification on immobilized metals; maltose binding protein; protein A domains that allow purification on immobilized immunoglobulin; or the domain utilized in the FLAGS extension/affinity purification system (Immunex Corp, Seattle Wash.).
[0108] The inclusion of a cleavable linker sequences such as Factor Xa (see, e.g., Ottavi, Biochimie, 80:289-93 (1998)), subtilisin protease recognition motif (see, e.g., Polyak, Protein Eng., 10:615-19 (1997)); enterokinase (Invitrogen, San Diego, Calif.), and the like, between the translocation domain (for efficient plasma membrane expression) and the rest of the newly translated polypeptide may be useful to facilitate purification. For example, one construct can include a polypeptide encoding a nucleic acid sequence linked to six histidine residues followed by a thioredoxin, an enterokinase cleavage site (see, e.g., Williams, Biochemistry, 34:1787-97 (1995)), and an C-terminal translocation domain. The histidine residues facilitate detection and purification while the enterokinase cleavage site provides a means for purifying the desired protein(s) from the remainder of the fusion protein. Technology pertaining to vectors encoding fusion proteins and application of fusion proteins are well described in the scientific and patent literature (see, e.g., Kroll, DNA Cell. Biol,. 12:441-53 (1993)).
[0109] Expression vectors, either as individual expression vectors or as libraries of expression vectors, comprising the ligand-binding region encoding sequences may be introduced into a genome or into the cytoplasm or a nucleus of a cell and expressed by a variety of conventional techniques, well described in the scientific and patent literature. See, e.g., Roberts, Nature, 328:731 (1987); Berger supra; Schneider, Protein Expr. Purif., 6435:10 (1995); Sambrook; Tijssen; Ausubel. Product information from manufacturers of biological reagents and experimental equipment also provide information regarding known biological methods. The vectors can be isolated from natural sources, obtained from such sources as ATCC or GenBank libraries, or prepared by synthetic or recombinant methods.
[0110] The nucleic acids can be expressed in expression cassettes, vectors or viruses which are stably or transiently expressed in cells (e.g., episomal expression systems). Selection markers can be incorporated into expression cassettes and vectors to confer a selectable phenotype on transformed cells and sequences. For example, selection markers can code for episomal maintenance and replication such that integration into the host genome is not required. For example, the marker may encode antibiotic resistance (e.g., chloramphenicol, kanamycin, G418, bleomycin, hygromycin) or herbicide resistance (e.g., chlorosulfuron or Basta) to permit selection of those cells transformed with the desired DNA sequences (see, e.g., Blondelet-Rouault, Gene, 190:315-17 (1997); Aubrecht, J. Pharmacol. Exp. Ther., 281:992-97 (1997)). Because selectable marker genes conferring resistance to substrates like neomycin or hygromycin can only be utilized in tissue culture, chemoresistance genes are also used as selectable markers in vitro and in vivo.
[0111] A chimeric nucleic acid sequence may encode a T1R ligand-binding region within any 7-transmembrane polypeptide. Because 7-transmembrane receptor polypeptides have similar primary sequences and secondary and tertiary structures, structural domains (e.g., extracellular domain, TM domains, cytoplasmic domain, etc.) can be readily identified by sequence analysis. For example, homology modeling, Fourier analysis and helical periodicity detection can identify and characterize the seven domains with a 7-transmembrane receptor sequence. Fast Fourier Transform (FFT) algorithms can be used to assess the dominant periods that characterize profiles of the hydrophobicity and variability of analyzed sequences. Periodicity detection enhancement and alpha helical periodicity index can be done as by, e.g., Donnelly, Protein Sci., 2:55-70 (1993). Other alignment and modeling algorithms are well known in the art (see, e.g., Peitsch, Receptors Channels, 4:161-64 (1996); Kyte & Doolittle, J. Md. Biol., 157:105-32 (1982); and Cronet, Protein Eng., 6:59-64 (1993).
[0112] The present invention also includes not only the nucleic acid molecules and polypeptides having the specified native and chimeric T1R nucleic and amino acid sequences, but also fragments thereof, particularly fragments of, e.g., 40, 60, 80, 100, 150, 200, or 250 nucleotides, or more, as well as polypeptide fragments of, e.g., 10, 20, 30, 50, 70, 100, or 150 amino acids, or more. Optionally, the nucleic acid fragments can encode an antigenic polypeptide that is capable of binding to an antibody raised against a T1R family member. Further, a protein fragment of the invention can optionally be an antigenic fragment that is capable of binding to an antibody raised against a T1R family member.
[0113] Also contemplated are chimeric proteins, comprising at least 10, 20, 30, 50, 70, 100, or 150 amino acids, or more, of one of at least one of the T1R polypeptides described herein, coupled to additional amino acids representing all or part of another GPCR, preferably a member of the 7 transmembrane superfamily. These chimeras can be made from the instant receptors and another GPCR, or they can be made by combining two or more of the present receptors. In one embodiment, one portion of the chimera corresponds to, or is derived from the transmembrane domain of a T1R polypeptide of the invention. In another embodiment, one portion of the chimera corresponds to, or is derived from the one or more of the transmembrane regions of a T1R polypeptide described herein, and the remaining portion or portions can come from another GPCR. Chimeric receptors are well known in the art, and the techniques for creating them and the selection and boundaries of domains or fragments of G Protein-Coupled Receptors for incorporation therein are also well known. Thus, this knowledge of those skilled in the art can readily be used to create such chimeric receptors. The use of such chimeric receptors can provide, for example, a taste selectivity characteristic of one of the receptors specifically disclosed herein, coupled with the signal transduction characteristics of another receptor, such as a well known receptor used in prior art assay systems.
[0114] For example, a region such as a ligand-binding region, an extracellular domain, a transmembrane domain, a transmembrane domain, a cytoplasmic domain, an N-terminal domain, a C-terminal domain, or any combination thereof, can be covalently linked to a heterologous protein. For instance, a T1R transmembrane region can be linked to a heterologous GPCR transmembrane domain, or a heterologous GPCR extracellular domain can be linked to a T1R transmembrane region. Other heterologous proteins of choice can include, e.g., green fluorescent protein, β-galactosidase polypeptides, glutamate receptor, and the rhodopsin polypeptides, e.g., N-terminal fragments of rhodopsin e.g., bovine rhodopsin.
[0115] It is also within the scope of the invention to use different host cells for expressing the T1Rs, fragments, or variants of the invention. To obtain high levels of expression of a cloned gene or nucleic acid, such as cDNAs encoding the T1Rs, fragments, or variants of the invention, one of skill typically subclones the nucleic acid sequence of interest into an expression vector that contains a strong promoter to direct transcription, a transcription/translation terminator, and if for a nucleic acid encoding a protein, a ribosome binding site for translational initiation. Suitable bacterial promoters are well known in the art and described, e.g., in Sambrook et al. Preferably, eukaryotic expression systems are used to express the subject hT1R receptor.
[0116] Any of the well-known procedures for introducing foreign nucleotide sequences into host cells may be used. These include the use of calcium phosphate transfection, polybrene, protoplast fusion, electroporation, liposomes, microinjection, plasma vectors, viral vectors and any of the other well known methods for introducing cloned genomic DNA, cDNA, synthetic DNA or other foreign genetic material into a host cell (see, e.g., Sambrook et al.) It is only necessary that the particular genetic engineering procedure used be capable of successfully introducing at lest one nucleic acid molecule into the host cell capable of expressing the T1R, fragment, or variant of interest.
[0117] After the expression vector is introduced into the cells, the transfected cells are cultured under conditions favoring expression of the receptor, fragment, or variant of interest, which is then recovered from the culture using standard techniques. Examples of such techniques are well known in the art. See, e.g., WO 00/06593, which is incorporated by reference in a manner consistent with this disclosure.
Assays for Detection of Compounds That Modulate the Activity of a T1R According to the Invention
[0118] Methods and compositions for determining whether a test compound specifically binds to a T1R polypeptide of the invention, both in vitro and in vivo are described below. Many aspects of cell physiology can be monitored to assess the effect of ligand-binding to a naturally occurring or chimeric T1Rs. These assays may be performed on intact cells expressing a T1R polypeptide, on permeabilized cells, or on membrane fractions produced by standard methods.
[0119] Taste receptors bind taste eliciting compounds and initiate the transduction of chemical stimuli into electrical signals. An activated or inhibited G protein will in turn alter the properties of target enzymes, channels, and other effector proteins. Some examples are the activation of cGMP phosphodiesterase by transducin in the visual system, adenylate cyclase by the stimulatory G protein, phospholipase C by Gq and other cognate G proteins, and modulation of diverse channels by Gi and other G proteins. Downstream consequences can also be examined such as generation of diacyl glycerol and IP3 by phospholipase C, and in turn, for calcium mobilization by IP3.
[0120] The subject chimeric T1R polypeptides of the assay will typically be selected from a polypeptide having a sequence contained in SEQ ID NOS.:2 and 4 or fragments or conservatively modified variants thereof.
[0121] Alternatively, the chimeric T1R proteins or polypeptides of the assay can be derived from a eukaryotic host cell, and can include an amino acid sequence having amino acid sequence identity to SEQ ID NO:s.:2 or 4 or conservatively modified variants thereof. Generally, the amino acid sequence identity will be at least 30% preferably 30-40%, more specifically 50-60, 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98%, or 99%. Optionally, the T1R proteins or polypeptides of the assays can comprise a region of a T1R polypeptide, such as an extracellular domain, transmembrane region, cytoplasmic domain, ligand-binding domain, and the like. Optionally, the T1R polypeptide, or a portion thereof, can be covalently linked to a heterologous protein to create a chimeric protein used in the assays described herein.
[0122] Modulators of T1R activity may be tested using T1R proteins or polypeptides as described above, either recombinant or naturally occurring. The T1R proteins or polypeptides can be isolated, expressed in a cell, expressed in a membrane derived from a cell, expressed in tissue or in an animal, either recombinant or naturally occurring. For example, tongue slices, dissociated cells from a tongue, transformed cells, or membranes can be used. Modulation can be tested using one of the in vitro or in vivo assays described herein.
Detection of Modulators
[0123] Compositions and methods for determining whether a test compound specifically binds to a T1R receptor of the invention, both in vitro and in vivo, are described below. Many aspects of cell physiology can be monitored to assess the effect of ligand binding to a T1R polypeptide of the invention. These assays may be performed on intact cells expressing a chemosensory receptor, on permeabilized cells, or on membrane fractions produced by standard methods or in vitro using de novo synthesized proteins.
[0124] In vivo, taste receptors bind to taste modulatory compounds and initiate the transduction of chemical stimuli into electrical signals. An activated or inhibited G protein will in turn alter the properties of target enzymes, channels, and other effector proteins. Some examples are the activation of cGMP phosphodiesterase by transducin in the visual system, adenylate cyclase by the stimulatory G protein, phospholipase C by Gq and other cognate G proteins, and modulation of diverse channels by Gi and other G proteins. Downstream consequences can also be examined such as generation of diacyl glycerol and IP3 by phospholipase C, and in turn, for calcium mobilization by IP3.
[0125] Alternatively, the T1R proteins or polypeptides of the assay can be derived from a eukaryotic host cell and can include an amino acid subsequence having amino acid sequence identity to the T1R polypeptides disclosed herein, or fragments or conservatively modified variants thereof. Generally, the amino acid sequence identity will be at least 35 to 50%, or optionally 75%, 85%, 90%, 95%, 96%, 97%, 98%, or 99%. Optionally, the T1R proteins or polypeptides of the assays can comprise a domain of a T1R protein, such as an extracellular domain, transmembrane region, transmembrane domain, cytoplasmic domain, ligand-binding domain, and the like. Further, as described above, the T1R protein or a domain thereof can be covalently linked to a heterologous protein to create a chimeric protein used in the assays described herein.
[0126] Modulators of T1R receptor activity are tested using T1R proteins or polypeptides as described above, either recombinant or naturally occurring. The T1R proteins or polypeptides can be isolated, expressed in a cell, expressed in a membrane derived from a cell, expressed in tissue or in an animal, either recombinant or naturally occurring. For example, tongue slices, dissociated cells from a tongue, transformed cells, or membranes can be used. Modulation can be tested using one of the in vitro or in vivo assays described herein.
1. In vitro Binding Assays
[0127] Taste transduction can also be examined in vitro with soluble or solid state reactions, using the T1R polypeptides of the invention. In a particular embodiment, T1R ligand-binding domains can be used in vitro in soluble or solid state reactions to assay for ligand binding.
[0128] It is possible that the ligand-binding domain may be formed by the N-terminal domain together with additional portions of the extracellular domain, such as the extracellular loops of the transmembrane domain.
[0129] In vitro binding assays have been used with other GPCRs, such as the metabotropic glutamate receptors (see, e.g., Han and Hampson, J. Biol. Chem. 274:10008-10013 (1999)). These assays might involve displacing a radioactively or fluorescently labeled ligand, measuring changes in intrinsic fluorescence or changes in proteolytic susceptibility, etc.
[0130] Ligand binding to a T1R polypeptide according to the invention can be tested in solution, in a bilayer membrane, optionally attached to a solid phase, in a lipid monolayer, or in vesicles. Binding of a modulator can be tested using, e.g., changes in spectroscopic characteristics (e.g., fluorescence, absorbance, refractive index) hydrodynamic (e.g., shape), chromatographic, or solubility properties.
[0131] In a preferred embodiment of the invention, a .sup.[35S]GTPγS binding assay is used. As described above, upon activation of a GPCR, the Gα subunit of the G protein complex is stimulated to exchange bound GDP for GTP. Ligand-mediated stimulation of G protein exchange activity can be measured in a biochemical assay measuring the binding of added radioactively labeled .sup.[35S]GTPγS to the G protein in the presence of a putative ligand. Typically, membranes containing the chemosensory receptor of interest are mixed with a G protein. Potential inhibitors and/or activators and .sup.[35S]GTPγS are added to the assay, and binding of .sup.[35S]GTPγS to the G protein is measured. Binding can be measured by liquid scintillation counting or by any other means known in the art, including scintillation proximity assays (SPA). In other assays formats, fluorescently labeled GTPγS can be utilized.
2. Fluorescence Polarization Assays
[0132] In another embodiment, Fluorescence Polarization ("FP") based assays may be used to detect and monitor ligand binding. Fluorescence polarization is a versatile laboratory technique for measuring equilibrium binding, nucleic acid hybridization, and enzymatic activity. Fluorescence polarization assays are homogeneous in that they do not require a separation step such as centrifugation, filtration, chromatography, precipitation, or electrophoresis. These assays are done in real time, directly in solution and do not require an immobilized phase. Polarization values can be measured repeatedly and after the addition of reagents since measuring the polarization is rapid and does not destroy the sample. Generally, this technique can be used to measure polarization values of fluorophores from low picomolar to micromolar levels. This section describes how fluorescence polarization can be used in a simple and quantitative way to measure the binding of ligands to the T1R polypeptides of the invention.
[0133] When a fluorescently labeled molecule is excited with plane polarized light, it emits light that has a degree of polarization that is inversely proportional to its molecular rotation. Large fluorescently labeled molecules remain relatively stationary during the excited state (4 nanoseconds in the case of fluorescein) and the polarization of the light remains relatively constant between excitation and emission. Small fluorescently labeled molecules rotate rapidly during the excited state and the polarization changes significantly between excitation and emission. Therefore, small molecules have low polarization values and large molecules have high polarization values. For example, a single-stranded fluorescein-labeled oligonucleotide has a relatively low polarization value but when it is hybridized to a complementary strand, it has a higher polarization value. When using FP to detect and monitor taste eliciting compound-binding which may activate or inhibit the chemosensory receptors of the invention, fluorescence-labeled taste eliciting compounds or auto-fluorescent taste eliciting compounds may be used.
[0134] Fluorescence polarization (P) is defined as: P = [ Int par - Int perp ] [ Int par + Int perp ] ##EQU1##
[0135] Where .Intpar is the intensity of the emission light parallel to the excitation light plane and Intperp is the intensity of the emission light perpendicular to the excitation light plane. P, being a ratio of light intensities, is a dimensionless number. For example, the Beacon® and Beacon 2000®. System may be used in connection with these assays. Such systems typically express polarization in millipolarization units (1 Polarization Unit=1000 mP Units).
[0136] The relationship between molecular rotation and size is described by the Perrin equation and the reader is referred to Jolley, M. E. (1991) in Journal of Analytical Toxicology, pp. 236-240 incorporated by reference, which gives a thorough explanation of this equation. Summarily, the Perrin equation states that polarization is directly proportional to the rotational relaxation time, the time that it takes a molecule to rotate through an angle of approximately 68.5°. Rotational relaxation time is related to viscosity (eta.), absolute temperature (T), molecular volume (V), and the gas constant (R) by the following equation: 2(Rotational Relaxation Time)=3 V RT.
[0137] The rotational relaxation time is small (≈nanosecond) for small molecules (e.g. fluorescein) and large (≈100 nanoseconds) for large molecules (e.g. immunoglobulins). If viscosity and temperature are held constant, rotational relaxation time, and therefore polarization, is directly related to the molecular volume. Changes in molecular volume may be due to interactions with other molecules, dissociation, polymerization, degradation, hybridization, or conformational changes of the fluorescently labeled molecule. For example, fluorescence polarization has been used to measure enzymatic cleavage of large fluorescein labeled polymers by proteases, DNases, and RNases. It also has been used to measure equilibrium binding for protein/protein interactions, antibody/antigen binding, and protein/DNA binding.
A. Solid State and Soluble High Throughput Assays
[0138] In yet another embodiment, the invention provides soluble assays using a T1R polypeptide; or a cell or tissue expressing a T1R polypeptide. In another embodiment, the invention provides solid phase based in vitro assays in a high throughput format, where the T1R polypeptide, or cell or tissue expressing the T1R polypeptide is attached to a solid phase substrate or a taste stimulating compound and contacted with a T1R receptor, and binding detected using an appropriate tag or antibody raised against the T1R receptor.
[0139] In the high throughput assays of the invention, it is possible to screen up to several thousand different modulators or ligands in a single day. In particular, each well of a microtiter plate can be used to run a separate assay against a selected potential modulator, or, if concentration or incubation time effects are to be observed, every 5-10 wells can test a single modulator. Thus, a single standard microtiter plate can assay about 100 (e.g., 96) modulators. If 1536 well plates are used, then a single plate can easily assay from about 1000 to about 1500 different compounds. It is also possible to assay multiple compounds in each plate well. It is possible to assay several different plates per day; assay screens for up to about 6,000-20,000 different compounds is possible using the integrated systems of the invention. More recently, microfluidic approaches to reagent manipulation have been developed.
[0140] The molecule of interest can be bound to the solid state component, directly or indirectly, via covalent or non-covalent linkage, e.g., via a tag. The tag can be any of a variety of components. In general, a molecule which binds the tag (a tag binder) is fixed to a solid support, and the tagged molecule of interest (e.g., the taste transduction molecule of interest) is attached to the solid support by interaction of the tag and the tag binder.
[0141] A number of tags and tag binders can be used, based upon known molecular interactions well described in the literature. For example, where a tag has a natural binder, for example, biotin, protein A, or protein G, it can be used in conjunction with appropriate tag binders (avidin, streptavidin, neutravidin, the Fc region of an immunoglobulin, etc.). Antibodies to molecules with natural binders such as biotin are also widely available and appropriate tag binders (see, SIGMA Immunochemicals 1998 catalogue SIGMA, St. Louis Mo.).
[0142] Similarly, any haptenic or antigenic compound can be used in combination with an appropriate antibody to form a tag/tag binder pair. Thousands of specific antibodies are commercially available and many additional antibodies are described in the literature. For example, in one common configuration, the tag is a first antibody and the tag binder is a second antibody which recognizes the first antibody. In addition to antibody-antigen interactions, receptor-ligand interactions are also appropriate as tag and tag-binder pairs. For example, agonists and antagonists of cell membrane receptors (e.g., cell receptor-ligand interactions such as transferrin, c-kit, viral receptor ligands, cytokine receptors, chemokine receptors, interleukin receptors, immunoglobulin receptors and antibodies, the cadherein family, the integrin family, the selectin family, and the like; see, e.g., Pigott & Power, The Adhesion Molecule Facts Book I (1993)). Similarly, toxins and venoms, viral epitopes, hormones (e.g., opiates, steroids, etc.), intracellular receptors (e.g., which mediate the effects of various small ligands, including steroids, thyroid hormone, retinoids and vitamin D; peptides), drugs, lectins, sugars, nucleic acids (both linear and cyclic polymer configurations), oligosaccharides, proteins, phospholipids and antibodies can all interact with various cell receptors.
[0143] Synthetic polymers, such as polyurethanes, polyesters, polycarbonates, polyureas, polyamides, polyethyleneimines, polyarylene sulfides, polysiloxanes, polyimides, and polyacetates can also form an appropriate tag or tag binder. Many other tag/tag binder pairs are also useful in assay systems described herein, as would be apparent to one of skill upon review of this disclosure.
[0144] Common linkers such as peptides, polyethers, and the like can also serve as tags, and include polypeptide sequences, such as poly gly sequences of between about 5 and 200 amino acids. Such flexible linkers are known to persons of skill in the art. For example, poly(ethelyne glycol) linkers are available from Shearwater Polymers, Inc. Huntsville, Ala. These linkers optionally have amide linkages, sulfhydryl linkages, or heterofunctional linkages.
[0145] Tag binders are fixed to solid substrates using any of a variety of methods currently available. Solid substrates are commonly derivatized or functionalized by exposing all or a portion of the substrate to a chemical reagent which fixes a chemical group to the surface which is reactive with a portion of the tag binder. For example, groups which are suitable for attachment to a longer chain portion would include amines, hydroxyl, thiol, and carboxyl groups. Aminoalkylsilanes and hydroxyalkylsilanes can be used to functionalize a variety of surfaces, such as glass surfaces. The construction of such solid phase biopolymer arrays is well described in the literature. See, e.g., Merrifield, J. Am. Chem. Soc., 85:2149-2154 (1963) (describing solid phase synthesis of, e.g., peptides); Geysen et al., J. Immun. Meth., 102:259-274 (1987) (describing synthesis of solid phase components on pins); Frank & Doring, Tetrahedron, 44:60316040 (1988) (describing synthesis of various peptide sequences on cellulose disks); Fodor et al., Science, 251:767-777 (1991); Sheldon et al., Clinical Chemistry, 39(4):718-719 (1993); and Kozal et al., Nature Medicine, 2(7):753759 (1996) (all describing arrays of biopolymers fixed to solid substrates). Non-chemical approaches for fixing tag binders to substrates include other common methods, such as heat, cross-linking by UV radiation, and the like.
3. Cell-based Assays
[0146] In one preferred embodiment, a T1R protein is expressed in a eukaryotic cell either in unmodified forms or as chimeric, variant or truncated receptors with or preferably without a heterologous, chaperone sequence that facilitates its maturation and targeting through the secretory pathway. Such T1R polypeptides can be expressed in any eukaryotic cell, such as HEK-293 cells. Preferably, the cells comprise a functional G protein, e.g., G..sub.α15, or a chimeric G.a16, gustducin or transducin or a chimeric G protein such as G16gust44 that is capable of coupling the chimeric receptor to an intracellular signaling pathway or to a signaling protein such as phospholipase C. Activation of T1R receptors in such cells can be detected using any standard method, such as by detecting changes in intracellular calcium by detecting FURA-2 dependent fluorescence in the cell. Such an assay is the basis of the experimental findings presented in this application.
[0147] Activated GPCR receptors often are substrates for kinases that phosphorylate the C-terminal tail of the receptor (and possibly other sites as well). Thus, activators will promote the transfer of 32P from radiolabeled ATP to the receptor, which can be assayed with a scintillation counter. The phosphorylation of the C-terminal tail will promote the binding of arrestin-like proteins and will interfere with the binding of G proteins. For a general review of GPCR signal transduction and methods of assaying signal transduction, see, e.g., Methods in Enzymology, vols. 237 and 238 (1994) and volume 96 (1983); Bourne et al., Nature, 10:349:117-27 (1991); Bourne et al., Nature, 348:125-32 (1990); Pitcher et al., Annu. Rev. Biochem., 67:653-92 (1998).
[0148] T1R modulation may be assayed by comparing the response of chimeric T1R polypeptides according to the invention treated with a putative T1R modulator to the response of an untreated control sample or a sample containing a known "positive" control. Such putative T1R modulators can include molecules that either inhibit or activate T1R polypeptide activity. In one embodiment, control samples treated with a compound that activates the T1R are assigned a relative T1R activity value of 100. Inhibition of a T1R polypeptide is achieved when the T1R activity value relative to the control sample is about 90%, optionally 50%, optionally 25-0%. Activation of a T1R polypeptide is achieved when the T1R activity value relative to the control is 110%, optionally 150%, 200-500%, or 1000-2000%.
[0149] Changes in ion flux may be assessed by determining changes in ionic polarization (i.e., electrical potential) of the cell or membrane expressing a T1R polypeptide. One means to determine changes in cellular polarization is by measuring changes in current (thereby measuring changes in polarization) with voltage-clamp and patch-clamp techniques (see, e.g., the "cell-attached" mode, the "inside-out" mode, and the "whole cell" mode, e.g., Ackerman et al., New Engl. J Med., 336:1575-1595 (1997)). Whole cell currents are conveniently determined using the standard. Other known assays include: radiolabeled ion flux assays and fluorescence assays using voltage-sensitive dyes (see, e.g., Vestergarrd-Bogind et al., J. Membrane Biol., 88:67-75 (1988); Gonzales & Tsien, Chem. Biol., 4:269-277 (1997); Daniel et al., J. Pharmacol. Meth., 25:185-193 (1991); Holevinsky et al., J. Membrane Biology, 137:59-70 (1994)).
[0150] The effects of the test compounds upon the function of the polypeptides can be measured by examining any of the parameters described above. Any suitable physiological change that affects GPCR activity can be used to assess the influence of a test compound on the polypeptides of this invention. When the functional consequences are determined using intact cells or animals, one can also measure a variety of effects such as transmitter release, hormone release, transcriptional changes to both known and uncharacterized genetic markers (e.g., northern blots), changes in cell metabolism such as cell growth or pH changes, and changes in intracellular second messengers such as Ca.2+, IP3, cGMP, or cAMP.
[0151] Preferred assays for GPCRs include cells that are loaded with ion or voltage sensitive dyes to report receptor activity. Assays for determining activity of such receptors can also use known agonists and antagonists for other G protein-coupled receptors as controls to assess activity of tested compounds. In assays for identifying modulatory compounds (e.g., agonists, antagonists), changes in the level of ions in the cytoplasm or membrane voltage will be monitored using an ion sensitive or membrane voltage fluorescent indicator, respectively. Among the ion-sensitive indicators and voltage probes that may be employed are those disclosed in the Molecular Probes 1997 Catalog. For G protein-coupled receptors, promiscuous G proteins such as G.sub.α15 and G.sub.α16 can be used in the assay of choice (Wilkie et al., Proc. Nat'l Acad. Sci., 88:10049-10053 (1991)). Alternatively, other G proteins such as gustducin, transducin and chimeric G proteins such as Gα16gust44 or G16g44 may be used.
[0152] Receptor activation initiates subsequent intracellular events, e.g., increases in second messengers. Activation of some G protein-coupled receptors stimulates the formation of inositol triphosphate (IP3) through phospholipase C-mediated hydrolysis of phosphatidylinositol (Berridge & Irvine, Nature, 312:315-21 (1984)). IP3 in turn stimulates the release of intracellular calcium ion stores. Thus, a change in cytoplasmic calcium ion levels, or a change in second messenger levels such as IP3 can be used to assess G protein-coupled receptor function. Cells expressing such G protein-coupled receptors may exhibit increased cytoplasmic calcium levels as a result of contribution from both calcium release from intracellular stores and extracellular calcium entry via plasma membrane ion channels.
[0153] In a preferred embodiment, T1R polypeptide activity is measured by expressing T1R gene in a heterologous cell with a promiscuous G protein that links the receptor to a phospholipase C signal transduction pathway (see Offermanns & Simon, J. Biol. Chem., 270:15175-15180 (1995)). Preferably, the cell line is HEK-293 (which does not normally express T1R genes) and the promiscuous G protein is G.sub.α15 (Offermanns & Simon, supra) or a chimeric G protein such as Gα16gust44. Modulation of taste transduction is assayed by measuring changes in intracellular Ca2+ levels, which change in response to modulation of the T1R signal transduction pathway via administration of a molecule that associates with the T1R polypeptide. Changes in Ca2+ levels are optionally measured using fluorescent Ca2+ indicator dyes and fluorometric imaging.
[0154] In another embodiment, phosphatidyl inositol (PI) hydrolysis can be analyzed according to U.S. Pat. No. 5,436,128, herein incorporated by reference. Briefly, the assay involves labeling of cells with 3H-myoinositol for 48 or more hrs. The labeled cells are treated with a test compound for one hour. The treated cells are lysed and extracted in chloroform-methanol-water after which the inositol phosphates were separated by ion exchange chromatography and quantified by scintillation counting. Fold stimulation is determined by calculating the ratio of cpm in the presence of agonist, to cpm in the presence of buffer control. Likewise, fold inhibition is determined by calculating the ratio of cpm in the presence of antagonist, to cpm in the presence of buffer control (which may or may not contain an agonist).
[0155] Other receptor assays can involve determining the level of intracellular cyclic nucleotides, e.g., cAMP or cGMP. In cases where activation of the receptor results in a decrease in cyclic nucleotide levels, it may be preferable to expose the cells to agents that increase intracellular cyclic nucleotide levels, e.g., forskolin, prior to adding a receptor-activating compound to the cells in the assay. In one embodiment, the changes in intracellular cAMP or cGMP can be measured using immunoassays. The method described in Offermanns & Simon, J. Bio. Chem., 270:15175-15180 (1995), may be used to determine the level of cAMP. Also, the method described in Felley-Bosco et al., Am. J. Resp. Cell and Mol. Biol., 11:159-164 (1994), may be used to determine the level of cGMP. Further, an assay kit for measuring cAMP and/or cGMP is described in U.S. Pat. No. 4,115,538, herein incorporated by reference.
[0156] In another embodiment, transcription levels can be measured to assess the effects of a test compound on signal transduction. A host cell containing T1R polypeptide of interest is contacted with a test compound for a sufficient time to effect any interactions, and then the level of gene expression is measured. The amount of time to effect such interactions may be empirically determined, such as by running a time course and measuring the level of transcription as a function of time. The amount of transcription may be measured by using any method known to those of skill in the art to be suitable. For example, mRNA expression of the protein of interest may be detected using northern blots or their polypeptide products may be identified using immunoassays. Alternatively, transcription based assays using a reporter gene may be used as described in U.S. Pat. No. 5,436,128, herein incorporated by reference. The reporter genes can be, e.g., chloramphenicol acetyltransferase, luciferase, beta-galactosidase, beta-lactamase and alkaline phosphatase. Furthermore, the protein of interest can be used as an indirect reporter via attachment to a second reporter such as green fluorescent protein (see, e.g., Mistili & Spector, Nature Biotechnology, 15:961-964 (1997)).
[0157] The amount of transcription is then compared to the amount of transcription in either the same cell in the absence of the test compound, or it may be compared with the amount of transcription in a substantially identical cell that lacks the T1R polypeptide(s) of interest. A substantially identical cell may be derived from the same cells from which the recombinant cell was prepared but which had not been modified by introduction of heterologous DNA. Any difference in the amount of transcription indicates that the test compound has in some manner altered the activity of the T1R polypeptide of interest.
4. Transgenic Non-human Animals Expressing Chemosensory Receptors
[0158] Non-human animals expressing one or more taste receptor sequences of the invention can also be used for receptor assays. Such expression can be used to determine whether a test compound specifically binds to a mammalian taste transmembrane receptor complex in vivo by contacting a non-human animal stably or transiently transfected with nucleic acids encoding chemosensory receptors or ligand-binding regions thereof with a test compound and determining whether the animal reacts to the test compound by specifically binding to the receptor polypeptide complex.
[0159] Animals transfected or infected with the vectors of the invention are particularly useful for assays to identify and characterize taste stimuli that can bind to a specific or sets of receptors. Such vector-infected animals expressing human taste receptor sequences can be used for in vivo screening of taste stimuli and their effect on, e.g., cell physiology (e.g., on taste neurons), on the CNS, or behavior.
[0160] Means to infect/express the nucleic acids and vectors, either individually or as libraries, are well known in the art. A variety of individual cell, organ, or whole animal parameters can be measured by a variety of means. The T1R sequences of the invention can be for example expressed in animal taste tissues by delivery with an infecting agent, e.g., adenovirus expression vector.
[0161] The endogenous taste receptor genes can remain functional and wild-type (native) activity can still be present. In other situations, where it is desirable that all taste receptor activity is by the introduced exogenous hybrid receptor, use of a knockout line is preferred. Methods for the construction of non-human transgenic animals, particularly transgenic mice, and the selection and preparation of recombinant constructs for generating transformed cells are well known in the art.
[0162] Construction of a "knockout" cell and animal is based on the premise that the level of expression of a particular gene in a mammalian cell can be decreased or completely abrogated by introducing into the genome a new DNA sequence that serves to interrupt some portion of the DNA sequence of the gene to be suppressed. Also, "gene trap insertion" can be used to disrupt a host gene, and mouse embryonic stem (ES) cells can be used to produce knockout transgenic animals (see, e.g., Holzschu, Transgenic Res 6:97-106 (1997)). The insertion of the exogenous is typically by homologous recombination between complementary nucleic acid sequences. The exogenous sequence is some portion of the target gene to be modified, such as exonic, intronic or transcriptional regulatory sequences, or any genomic sequence which is able to affect the level of the target gene's expression; or a combination thereof. Gene targeting via homologous recombination in pluripotential embryonic stem cells allows one to modify precisely the genomic sequence of interest. Any technique can be used to create, screen for, propagate, a knockout animal, e.g., see Bijvoet, Hum. Mol. Genet. 7:53-62 (1998); Moreadith, J. Mol. Med. 75:208-216 (1997); Tojo, Cytotechnology 19:161-165 (1995); Mudgett, Methods Mol. Biol. 48:167-184 (1995); Longo, Transgenic Res. 6:321-328 (1997); U.S. Pat. Nos. 5,616,491; 5,464,764; 5,631,153; 5,487,992; 5,627,059; 5,272,071; WO 91/09955; WO 93/09222; WO 96/29411; WO 95/31560; WO 91/12650.
[0163] The nucleic acids of the invention can also be used as reagents to produce "knockout" human cells and their progeny. Likewise, the nucleic acids of the invention can also be used as reagents to produce "knock-ins" in mice. The human or rat T1R gene sequences can replace the orthologs T1R in the mouse genome. In this way, a mouse expressing a human or rat T1R is produced. This mouse can then be used to analyze the function of human or rat T1Rs, and to identify ligands for such T1Rs.
[0164] Modulators
[0165] The compounds tested as modulators of a T1R family member can be any small chemical compound, or a biological entity, such as a protein, sugar, nucleic acid or lipid. Alternatively, modulators can be genetically altered versions of a T1R family member. Typically, test compounds may be small chemical molecules and peptides. Essentially any chemical compound can be used as a potential modulator or ligand in the assays of the invention, although most often compounds can be dissolved in aqueous or organic (especially DMSO-based) solutions are used. The assays may be designed to screen large chemical libraries by automating the assay steps and providing compounds from any convenient source to assays, which are typically run in parallel (e.g., in microtiter formats on microtiter plates in robotic assays). It will be appreciated that there are many suppliers of chemical compounds, including Sigma (St. Louis, Mo.), Aldrich (St. Louis, Mo.), Sigma-Aldrich (St. Louis, Mo.), Fluka Chemika-Biochemica Analytika (Buchs, Switzerland) and the like.
[0166] In one embodiment, high throughput screening methods involve providing a combinatorial chemical or peptide library containing a large number of potential therapeutic compounds (potential modulator or ligand compounds). Such "combinatorial chemical libraries" or "ligand libraries" are then screened in one or more assays, as described herein, to identify those library members (particular chemical species or subclasses) that display a desired characteristic activity. The compounds thus identified can serve as conventional "lead compounds" or can themselves be used as potential or actual consumer products.
[0167] A combinatorial chemical library is a collection of diverse chemical compounds generated by either chemical synthesis or biological synthesis, by combining a number of chemical "building blocks" such as reagents. For example, a linear combinatorial chemical library such as a polypeptide library is formed by combining a set of chemical building blocks (amino acids) in every possible way for a given compound length (i.e., the number of amino acids in a polypeptide compound). Millions of chemical compounds can be synthesized through such combinatorial mixing of chemical building blocks.
[0168] Preparation and screening of combinatorial chemical libraries is well known to those of skill in the art. Such combinatorial chemical libraries include, but are not limited to, peptide libraries (see, e.g., U.S. Pat. No. 5,010,175, Furka, Int. J. Pept. Prot. Res., 37:487-93 (1991) and Houghton et al., Nature, 354:84-88 (1991)). Other chemistries for generating chemical diversity libraries can also be used. Such chemistries include, but are not limited to: peptoids (e.g., WO 91/19735), encoded peptides (e.g., WO 93/20242), random bio-oligomers (e.g., WO 92/00091), benzodiazepines (e.g., U.S. Pat. No. 5,288,514), diversomers such as hydantoins, benzodiazepines and dipeptides (Hobbs et al., PNAS., 90:6909-13 (1993)), vinylogous polypeptides (Hagihara et al., J. Amer. Chem. Soc., 114:6568 (1992)), nonpeptidal peptidomimetics with glucose scaffolding (Hirschmann et al., J. Amer. Chem. Soc., 114:9217-18 (1992)), analogous organic syntheses of small compound libraries (Chen et al., J. Amer. Chem. Soc., 116:2661 (1994)), oligocarbamates (Cho et al., Science, 261:1303 (1993)), peptidyl phosphonates (Campbell et al., J. Org. Chem., 59:658 (1994)), nucleic acid libraries (Ausubel, Berger, and Sambrook, all supra), peptide nucleic acid libraries (U.S. Pat. No. 5,539,083), antibody libraries (Vaughn et al., Nature Biotechnology, 14(3):309-14 (1996) and PCT/US96/10287), carbohydrate libraries (Liang et al., Science, 274:1520-22 (1996) and U.S. Pat. No. 5,593,853), small organic molecule libraries (benzodiazepines, Baum, C&EN, Jan. 18, page 33 (1993); thiazolidinones and metathiazanones, U.S. Pat. No. 5,549,974; pynrolidines, U.S. Pat. Nos. 5,525,735 and 5,519,134; morpholino compounds, U.S. Pat. No. 5,506,337; benzodiazepines, 5,288,514, and the like).
[0169] Devices for the preparation of combinatorial libraries are commercially available (see, e.g., 357 MPS, 390 MPS (Advanced Chem Tech, Louisville Ky.), Symphony (Rainin, Woburn, Mass.), 433A (Applied Biosystems, Foster City, Calif.), 9050 Plus (Millipore, Bedford, Mass.)). In addition, numerous combinatorial libraries are themselves commercially available (see, e.g., ComGenex, Princeton, N.J.; Tripos, Inc., St. Louis, Mo.; 3D Pharmaceuticals, Exton, Pa.; Martek Biosciences; Columbia, Md.; etc.).
[0170] In one aspect of the invention, the T1R modulators can be used in any food product, confectionery, pharmaceutical composition, or ingredient thereof to thereby modulate the taste of the product, composition, or ingredient in a desired manner. For instance, T1R modulators that elicit sweet or umami taste sensation can be added to provide an improved sweet or umami taste to a product or composition, while T1R modulators which enhance sweet or umami taste sensations can be added to enhance the sweet or umami taste of another compound in a composition such as a food or beverage product or composition. Also, the invention provides means of identifying sweet or umami compounds and enhancers found in foods, beverages and medicinals and producing taste improved foods, beverages and medicinals lacking or having a reduced quantity thereof.
Use of Compounds Identified by the Invention
[0171] Compounds identified according to the invention may be added to foods, beverages or medicinal compositions to modulate sweet or umami taste.
[0172] As noted previously, preferably, the taste modulatory properties of compounds identified in the subject cell-based assays will be confirmed in taste tests, e.g., human taste tests.
Kits
[0173] The subject chimeric T1R genes and their homologs are useful tools for identifying taste receptor cells, for forensics and paternity determinations, and for examining taste transduction. T1R family member-specific reagents that specifically hybridize to T1R nucleic acids, such as T1R probes and primers, and T1R specific reagents that specifically bind to a T1R protein, e.g., T1R antibodies are used to examine taste cell expression and taste transduction regulation.
[0174] Nucleic acid assays for the presence of DNA and RNA for a T1R family member in a sample include numerous techniques are known to those skilled in the art, such as southern analysis, northern analysis, dot blots, RNase protection, S1 analysis, amplification techniques such as PCR, and in situ hybridization. In in situ hybridization, for example, the target nucleic acid is liberated from its cellular surroundings in such as to be available for hybridization within the cell while preserving the cellular morphology for subsequent interpretation and analysis. The following articles provide an overview of the art of in situ hybridization: Singer et al., Biotechniques, 4:230250 (1986); Haase et al., Methods in Virology, vol. VII, 189-226 (1984); and Names et al., eds., Nucleic Acid Hybridization: A Practical Approach (1987). In addition, a T1R protein can be detected with the various immunoassay techniques described above. The test sample is typically compared to both a positive control (e.g., a sample expressing a recombinant T1R protein) and a negative control.
[0175] The present invention also provides for kits for screening for modulators of T1R family members. Such kits can be prepared from readily available materials and reagents. For example, such kits can comprise any one or more of the following materials: T1R nucleic acids or proteins, reaction tubes, and instructions for testing T1R activity. Optionally, the kit contains a functional T1R polypeptide. A wide variety of kits and components can be prepared according to the present invention, depending upon the intended user of the kit and the particular needs of the user.
[0176] Having now generally described the invention, the same will be more readily understood by reference to the following examples, which are provided by way of illustration and are not intended as limiting. It is understood that various modifications and changes can be made to the herein disclosed exemplary embodiments without departing from the spirit and scope of the invention.
EXAMPLE 1
[0177] Nucleic acid sequences encoding the hybrid hT1R2-1 nucleic acid sequence contained in SEQ ID NO: 1 and the chimeric umami-sweet hT1R1-2 nucleic acid sequence contained in SEQ ID NO. 3 were constructed. The first hT1R2-1 sequence contains the extracellular domains of hT1R2 and the transmembrane domains of hT1R1and the second sequence contains the extracellular domains of hT1R1 and the transmembrane domains of hT1R2. HEK-293 cell lines were created which stably produce these hybrid taste receptors Particularly, a stable HEK-293 cell line that stably constitutively expresses the chimeric hT1R2-1 sequence, hT1R3, and a chimeric G protein G16-t25 was produced which co-expresses hT1R2-1, hT1R3, and this chimeric G protein. Additionally, a stable HEK-293 cell line was constructed that stably constitutively expresses chimeric hT1R1-2, rT1R3, and another chimeric G protein G16g44 which comprises the N-terminal residues of G16 and the last 44 carboxy residues substituted with the corresponding 44 residues of gustducin. These stable HEK-293 cell lines were used in assays for sweet and umami ligands and enhancers as described in the following examples.
EXAMPLE 2
[0178] The stable hT1R2-1 cell line in example 1 was screened against a number of sweet ligands at the concentrations shown in FIG. 7 and the effect on intracellular calcium and hT1R2-1 receptor activity detected by fluorimetric imaging. These assays showed that all of the sweet compounds tested activated the chimeric hT1R2-1 receptor at the tested concentrations with the exception of cyclamate. The effective concentrations (EC50s) of specific sweet compounds aspartame, D-Trp, sucrose, fructose and cyclamate to hT1R2-1/hT1R3 was also compared to the EC50s of these same compounds when used to activate the wild-type sweet receptor hT1R2/hT1R3. These results are contained in FIG. 8.
EXAMPLE 3
[0179] An assay was conducted to determine the effect of cyclamate on the activation of the chimeric hT1R2-1 taste receptor by aspartame. As shown in FIG. 9 the addition of cyclamate enhanced aspartame responses in the hT1R2-1 stable cell line. As shown in the FIG. 9 the EC50 for aspartame was 0.97 in the absence of cyclamate and 0.44 in the presence of 10 mM cyclamate. Additionally, as shown by the experimental results in FIGS. 10-12 respectively, cyclamate also enhanced D-tryptophan, sucrose and fructose activation of hT1R2-1.
EXAMPLE 4
[0180] Assays were also conducted to assess the effect of cyclamate on the activation of hT1R2-1 (SEQ ID NO:2)by a proprietary umami ligand referred to as '807. As shown in FIG. 13 cyclamate enhanced '807 activity. The EC50 for the '807 compound in the absence of cyclamate was 0.42 and in the presence of 5 mM cyclamate was 0.31. Also, as shown in FIG. 14 the '807 compound enhanced the activation response of hT1R2-1 to aspartame.
EXAMPLE 5
[0181] The response of chimeric umami-sweet receptor hT1R1-2 (SEQ ID NO:4) in the stable cell line co-expressing hT1R1-2 and rT1R3 to various umami ligands (L-Glu, L-Asp, and L-AP4) and to D-Glu was also assayed in the presence and absence of IMP, GMP and CMP as shown in FIG. 15. The tested umami ligands were found to activate the chimeric umami-sweet receptor. Also as shown in FIG. 16 experiments were further conducted to assess the effect of IMP on the MSG induced activation of hT1R1-2 (SEQ ID NO:4). As shown by the experimental results therein the IMP compound acted as an enhancer based on the EC50 values therein in the presence and absence of IMP.
Sequence CWU
1
17 1 2523 DNA Homo sapiens 1 atggggccca gggcaaagac catctgctcc ctgttcttcc
tcctatgggt cctggctgag 60 ccggctgaga actcggactt ctacctgcct ggggattacc
tcctgggtgg cctcttctcc 120 ctccatgcca acatgaaggg cattgttcac cttaacttcc
tgcaggtgcc catgtgcaag 180 gagtatgaag tgaaggtgat aggctacaac ctcatgcagg
ccatgcgctt cgcggtggag 240 gagatcaaca atgacagcag cctgctgcct ggtgtgctgc
tgggctatga gatcgtggat 300 gtgtgctaca tctccaacaa tgtccagccg gtgctctact
tcctggcaca cgaggacaac 360 ctccttccca tccaagagga ctacagtaac tacatttccc
gtgtggtggc tgtcattggc 420 cctgacaact ccgagtctgt catgactgtg gccaacttcc
tctccctatt tctccttcca 480 cagatcacct acagcgccat cagcgatgag ctgcgagaca
aggtgcgctt cccggctttg 540 ctgcgtacca cacccagcgc cgaccaccac gtcgaggcca
tggtgcagct gatgctgcac 600 ttccgctgga actggatcat tgtgctggtg agcagcgaca
cctatggccg cgacaatggc 660 cagctgcttg gcgagcgcgt ggcccggcgc gacatctgca
tcgccttcca ggagacgctg 720 cccacactgc agcccaacca gaacatgacg tcagaggagc
gccagcgcct ggtgaccatt 780 gtggacaagc tgcagcagag cacagcgcgc gtcgtggtcg
tgttctcgcc cgacctgacc 840 ctgtaccact tcttcaatga ggtgctgcgc cagaacttca
cgggcgccgt gtggatcgcc 900 tccgagtcct gggccatcga cccggtcctg cacaacctca
cggagctggg ccacttgggc 960 accttcctgg gcatcaccat ccagagcgtg cccatcccgg
gcttcagtga gttccgcgag 1020 tggggcccac aggctgggcc gccacccctc agcaggacca
gccagagcta tacctgcaac 1080 caggagtgcg acaactgcct gaacgccacc ttgtccttca
acaccattct caggctctct 1140 ggggagcgtg tcgtctacag cgtgtactct gcggtctatg
ctgtggccca tgccctgcac 1200 agcctcctcg gctgtgacaa aagcacctgc accaagaggg
tggtctaccc ctggcagctg 1260 cttgaggaga tctggaaggt caacttcact ctcctggacc
accaaatctt cttcgacccg 1320 caaggggacg tggctctgca cttggagatt gtccagtggc
aatgggaccg gagccagaat 1380 cccttccaga gcgtcgcctc ctactacccc ctgcagcgac
agctgaagaa catccaagac 1440 atctcctggc acaccgtcaa caacacgatc cctatgtcca
tgtgttccaa gaggtgccag 1500 tcagggcaaa agaagaagcc tgtgggcatc cacgtctgct
gcttcgagtg catcgactgc 1560 cttcccggca ccttcctcaa ccacactgaa gatgaatatg
aatgccaggc ctgcccgaat 1620 aacgagtggt cctaccagag tgagacctcc tgcttcaagc
ggcagctggt cttcctcgag 1680 ttgcgtgagc acacctcttg ggtgctgctg gcagctaaca
cgctgctgct gctgctgctg 1740 cttgggactg ctggcctgtt tgcctggcac ctagacaccc
ctgtggtgag gtcagcaggg 1800 ggccgcctgt gctttcttat gctgggctcc ctggcagcag
gtagtggcag cctctatggc 1860 ttctttgggg aacccacaag gcctgcgtgc ttgctacgcc
aggccctctt tgcccttggt 1920 ttcaccatct tcctgtcctg cctgacagtt cgctcattcc
aactaatcat catcttcaag 1980 ttttccacca aggtacctac attctaccac gcctgggtcc
aaaaccacgg tgctggcctg 2040 tttgtgatga tcagctcagc ggcccagctg cttatctgtc
taacttggct ggtggtgtgg 2100 accccactgc ctgctaggga ataccagcgc ttcccccatc
tggtgatgct tgagtgcaca 2160 gagaccaact ccctgggctt catactggcc ttcctctaca
atggcctcct ctccatcagt 2220 gcctttgcct gcagctacct gggtaaggac ttgccagaga
actacaacga ggccaaatgt 2280 gtcaccttca gcctgctctt caacttcgtg tcctggatcg
ccttcttcac cacggccagc 2340 gtctacgacg gcaagtacct gcctgcggcc aacatgatgg
ctgggctgag cagcctgagc 2400 agcggcttcg gtgggtattt tctgcctaag tgctacgtga
tcctctgccg cccagacctc 2460 aacagcacag agcacttcca ggcctccatt caggactaca
cgaggcgctg cggctccacc 2520 tga
2523 2 840 PRT Homo sapiens 2 Met Gly Pro Arg Ala
Lys Thr Ile Cys Ser Leu Phe Phe Leu Leu Trp 1 5
10 15 Val Leu Ala Glu Pro Ala Glu Asn Ser Asp Phe
Tyr Leu Pro Gly Asp 20 25
30 Tyr Leu Leu Gly Gly Leu Phe Ser Leu His Ala Asn Met Lys Gly Ile
35 40 45 Val His Leu Asn Phe Leu Gln
Val Pro Met Cys Lys Glu Tyr Glu Val 50 55
60 Lys Val Ile Gly Tyr Asn Leu Met Gln Ala Met Arg Phe Ala Val Glu
65 70 75 80 Glu Ile
Asn Asn Asp Ser Ser Leu Leu Pro Gly Val Leu Leu Gly Tyr
85 90 95 Glu Ile Val Asp Val Cys Tyr
Ile Ser Asn Asn Val Gln Pro Val Leu 100 105
110 Tyr Phe Leu Ala His Glu Asp Asn Leu Leu Pro Ile Gln Glu
Asp Tyr 115 120 125 Ser Asn Tyr
Ile Ser Arg Val Val Ala Val Ile Gly Pro Asp Asn Ser 130
135 140 Glu Ser Val Met Thr Val Ala Asn Phe Leu Ser Leu
Phe Leu Leu Pro 145 150 155
160 Gln Ile Thr Tyr Ser Ala Ile Ser Asp Glu Leu Arg Asp Lys Val Arg
165 170 175 Phe Pro Ala Leu
Leu Arg Thr Thr Pro Ser Ala Asp His His Val Glu 180
185 190 Ala Met Val Gln Leu Met Leu His Phe Arg Trp
Asn Trp Ile Ile Val 195 200 205
Leu Val Ser Ser Asp Thr Tyr Gly Arg Asp Asn Gly Gln Leu Leu Gly 210
215 220 Glu Arg Val Ala Arg Arg Asp Ile Cys
Ile Ala Phe Gln Glu Thr Leu 225 230 235
240 Pro Thr Leu Gln Pro Asn Gln Asn Met Thr Ser Glu Glu Arg
Gln Arg 245 250 255 Leu
Val Thr Ile Val Asp Lys Leu Gln Gln Ser Thr Ala Arg Val Val
260 265 270 Val Val Phe Ser Pro Asp Leu
Thr Leu Tyr His Phe Phe Asn Glu Val 275 280
285 Leu Arg Gln Asn Phe Thr Gly Ala Val Trp Ile Ala Ser Glu Ser
Trp 290 295 300 Ala Ile Asp Pro Val
Leu His Asn Leu Thr Glu Leu Gly His Leu Gly 305 310
315 320 Thr Phe Leu Gly Ile Thr Ile Gln Ser Val
Pro Ile Pro Gly Phe Ser 325 330
335 Glu Phe Arg Glu Trp Gly Pro Gln Ala Gly Pro Pro Pro Leu Ser Arg
340 345 350 Thr Ser Gln Ser
Tyr Thr Cys Asn Gln Glu Cys Asp Asn Cys Leu Asn 355
360 365 Ala Thr Leu Ser Phe Asn Thr Ile Leu Arg Leu Ser
Gly Glu Arg Val 370 375 380 Val Tyr
Ser Val Tyr Ser Ala Val Tyr Ala Val Ala His Ala Leu His 385
390 395 400 Ser Leu Leu Gly Cys Asp Lys
Ser Thr Cys Thr Lys Arg Val Val Tyr 405
410 415 Pro Trp Gln Leu Leu Glu Glu Ile Trp Lys Val Asn
Phe Thr Leu Leu 420 425 430
Asp His Gln Ile Phe Phe Asp Pro Gln Gly Asp Val Ala Leu His Leu
435 440 445 Glu Ile Val Gln Trp Gln Trp
Asp Arg Ser Gln Asn Pro Phe Gln Ser 450 455
460 Val Ala Ser Tyr Tyr Pro Leu Gln Arg Gln Leu Lys Asn Ile Gln Asp
465 470 475 480 Ile Ser
Trp His Thr Val Asn Asn Thr Ile Pro Met Ser Met Cys Ser
485 490 495 Lys Arg Cys Gln Ser Gly Gln
Lys Lys Lys Pro Val Gly Ile His Val 500 505
510 Cys Cys Phe Glu Cys Ile Asp Cys Leu Pro Gly Thr Phe Leu
Asn His 515 520 525 Thr Glu Asp
Glu Tyr Glu Cys Gln Ala Cys Pro Asn Asn Glu Trp Ser 530
535 540 Tyr Gln Ser Glu Thr Ser Cys Phe Lys Arg Gln Leu
Val Phe Leu Glu 545 550 555
560 Leu Arg Glu His Thr Ser Trp Val Leu Leu Ala Ala Asn Thr Leu Leu
565 570 575 Leu Leu Leu Leu
Leu Gly Thr Ala Gly Leu Phe Ala Trp His Leu Asp 580
585 590 Thr Pro Val Val Arg Ser Ala Gly Gly Arg Leu
Cys Phe Leu Met Leu 595 600 605
Gly Ser Leu Ala Ala Gly Ser Gly Ser Leu Tyr Gly Phe Phe Gly Glu 610
615 620 Pro Thr Arg Pro Ala Cys Leu Leu Arg
Gln Ala Leu Phe Ala Leu Gly 625 630 635
640 Phe Thr Ile Phe Leu Ser Cys Leu Thr Val Arg Ser Phe Gln
Leu Ile 645 650 655 Ile
Ile Phe Lys Phe Ser Thr Lys Val Pro Thr Phe Tyr His Ala Trp
660 665 670 Val Gln Asn His Gly Ala Gly
Leu Phe Val Met Ile Ser Ser Ala Ala 675 680
685 Gln Leu Leu Ile Cys Leu Thr Trp Leu Val Val Trp Thr Pro Leu
Pro 690 695 700 Ala Arg Glu Tyr Gln
Arg Phe Pro His Leu Val Met Leu Glu Cys Thr 705 710
715 720 Glu Thr Asn Ser Leu Gly Phe Ile Leu Ala
Phe Leu Tyr Asn Gly Leu 725 730
735 Leu Ser Ile Ser Ala Phe Ala Cys Ser Tyr Leu Gly Lys Asp Leu Pro
740 745 750 Glu Asn Tyr Asn
Glu Ala Lys Cys Val Thr Phe Ser Leu Leu Phe Asn 755
760 765 Phe Val Ser Trp Ile Ala Phe Phe Thr Thr Ala Ser
Val Tyr Asp Gly 770 775 780 Lys Tyr
Leu Pro Ala Ala Asn Met Met Ala Gly Leu Ser Ser Leu Ser 785
790 795 800 Ser Gly Phe Gly Gly Tyr Phe
Leu Pro Lys Cys Tyr Val Ile Leu Cys 805
810 815 Arg Pro Asp Leu Asn Ser Thr Glu His Phe Gln Ala
Ser Ile Gln Asp 820 825 830
Tyr Thr Arg Arg Cys Gly Ser Thr 835 840 3 2523
DNA Homo sapiens 3 atgctgctct gcacggctcg cctggtcggc ctgcagcttc
tcatttcctg ctgctgggcc 60 tttgcctgcc atagcacgga gtcttctcct gacttcaccc
tccccggaga ttacctcctg 120 gcaggcctgt tccctctcca ttctggctgt ctgcaggtga
ggcacagacc cgaggtgacc 180 ctgtgtgaca ggtcttgtag cttcaatgag catggctacc
acctcttcca ggctatgcgg 240 cttggggttg aggagataaa caactccacg gccctgctgc
ccaacatcac cctggggtac 300 cagctgtatg atgtgtgttc tgactctgcc aatgtgtatg
ccacgctgag agtgctctcc 360 ctgccagggc aacaccacat agagctccaa ggagaccttc
tccactattc ccctacggtg 420 ctggcagtga ttgggcctga cagcaccaac cgtgctgcca
ccacagccgc cctgctgagc 480 cctttcctgg tgcccatgat tagctatgcg gccagcagcg
agacgctcag cgtgaagcgg 540 cagtatccct ctttcctgcg caccatcccc aatgacaagt
accaggtgga gaccatggtg 600 ctgctgctgc agaagttcgg gtggacctgg atctctctgg
ttggcagcag tgacgactat 660 gggcagctag gggtgcaggc actggagaac caggccactg
gtcaggggat ctgcattgct 720 ttcaaggaca tcatgccctt ctctgcccag gtgggcgatg
agaggatgca gtgcctcatg 780 cgccacctgg cccaggccgg ggccaccgtc gtggttgttt
tttccagccg gcagttggcc 840 agggtgtttt tcgagtccgt ggtgctgacc aacctgactg
gcaaggtgtg ggtcgcctca 900 gaagcctggg ccctctccag gcacatcact ggggtgcccg
ggatccagcg cattgggatg 960 gtgctgggcg tggccatcca gaagagggct gtccctggcc
tgaaggcgtt tgaagaagcc 1020 tatgcccggg cagacaagaa ggcccctagg ccttgccaca
agggctcctg gtgcagcagc 1080 aatcagctct gcagagaatg ccaagctttc atggcacaca
cgatgcccaa gctcaaagcc 1140 ttctccatga gttctgccta caacgcatac cgggctgtgt
atgcggtggc ccatggcctc 1200 caccagctcc tgggctgtgc ctctggagct tgttccaggg
gccgagtcta cccctggcag 1260 cttttggagc agatccacaa ggtgcatttc cttctacaca
aggacactgt ggcgtttaat 1320 gacaacagag atcccctcag tagctataac ataattgcct
gggactggaa tggacccaag 1380 tggaccttca cggtcctcgg ttcctccaca tggtctccag
ttcagctaaa cataaatgag 1440 accaaaatcc agtggcacgg aaaggacaac caggtgccta
agtctgtgtg ttccagcgac 1500 tgtcttgaag ggcaccagcg agtggttacg ggtttccatc
actgctgctt tgagtgtgtg 1560 ccctgtgggg ctgggacctt cctcaacaag agtgacctct
acagatgcca gccttgtggg 1620 aaagaagagt gggcacctga gggaagccag acctgcttcc
cgcgcactgt ggtgtttctc 1680 gagtggcatg aggcacccac catcgctgtg gccctgctgg
ccgccctggg cttcctcagc 1740 accctggcca tcctggtgat attctggagg cacttccaga
cacccatagt tcgctcggct 1800 gggggcccca tgtgcttcct gatgctgaca ctgctgctgg
tggcatacat ggtggtcccg 1860 gtgtacgtgg ggccgcccaa ggtctccacc tgcctctgcc
gccaggccct ctttcccctc 1920 tgcttcacaa tttgcatctc ctgtatcgcc gtgcgttctt
tccagatcgt ctgcgccttc 1980 aagatggcca gccgcttccc acgcgcctac agctactggg
tccgctacca ggggccctac 2040 gtctctatgg catttatcac ggtactcaaa atggtcattg
tggtaattgg catgctggcc 2100 acgggcctca gtcccaccac ccgtactgac cccgatgacc
ccaagatcac aattgtctcc 2160 tgtaacccca actaccgcaa cagcctgctg ttcaacacca
gcctggacct gctgctctca 2220 gtggtgggtt tcagcttcgc ctacatgggc aaagagctgc
ccaccaacta caacgaggcc 2280 aagttcatca ccctcagcat gaccttctat ttcacctcat
ccgtctccct ctgcaccttc 2340 atgtctgcct acagcggggt gctggtcacc atcgtggacc
tcttggtcac tgtgctcaac 2400 ctcctggcca tcagcctggg ctacttcggc cccaagtgct
acatgatcct cttctacccg 2460 gagcgcaaca cgcccgccta cttcaacagc atgatccagg
gctacaccat gaggagggac 2520 tag
2523 4 840 PRT Homo sapiens 4 Met Leu Leu Cys Thr
Ala Arg Leu Val Gly Leu Gln Leu Leu Ile Ser 1 5
10 15 Cys Cys Trp Ala Phe Ala Cys His Ser Thr Glu
Ser Ser Pro Asp Phe 20 25
30 Thr Leu Pro Gly Asp Tyr Leu Leu Ala Gly Leu Phe Pro Leu His Ser
35 40 45 Gly Cys Leu Gln Val Arg His
Arg Pro Glu Val Thr Leu Cys Asp Arg 50 55
60 Ser Cys Ser Phe Asn Glu His Gly Tyr His Leu Phe Gln Ala Met Arg
65 70 75 80 Leu Gly
Val Glu Glu Ile Asn Asn Ser Thr Ala Leu Leu Pro Asn Ile
85 90 95 Thr Leu Gly Tyr Gln Leu Tyr
Asp Val Cys Ser Asp Ser Ala Asn Val 100 105
110 Tyr Ala Thr Leu Arg Val Leu Ser Leu Pro Gly Gln His His
Ile Glu 115 120 125 Leu Gln Gly
Asp Leu Leu His Tyr Ser Pro Thr Val Leu Ala Val Ile 130
135 140 Gly Pro Asp Ser Thr Asn Arg Ala Ala Thr Thr Ala
Ala Leu Leu Ser 145 150 155
160 Pro Phe Leu Val Pro Met Ile Ser Tyr Ala Ala Ser Ser Glu Thr Leu
165 170 175 Ser Val Lys Arg
Gln Tyr Pro Ser Phe Leu Arg Thr Ile Pro Asn Asp 180
185 190 Lys Tyr Gln Val Glu Thr Met Val Leu Leu Leu
Gln Lys Phe Gly Trp 195 200 205
Thr Trp Ile Ser Leu Val Gly Ser Ser Asp Asp Tyr Gly Gln Leu Gly 210
215 220 Val Gln Ala Leu Glu Asn Gln Ala Thr
Gly Gln Gly Ile Cys Ile Ala 225 230 235
240 Phe Lys Asp Ile Met Pro Phe Ser Ala Gln Val Gly Asp Glu
Arg Met 245 250 255 Gln
Cys Leu Met Arg His Leu Ala Gln Ala Gly Ala Thr Val Val Val
260 265 270 Val Phe Ser Ser Arg Gln Leu
Ala Arg Val Phe Phe Glu Ser Val Val 275 280
285 Leu Thr Asn Leu Thr Gly Lys Val Trp Val Ala Ser Glu Ala Trp
Ala 290 295 300 Leu Ser Arg His Ile
Thr Gly Val Pro Gly Ile Gln Arg Ile Gly Met 305 310
315 320 Val Leu Gly Val Ala Ile Gln Lys Arg Ala
Val Pro Gly Leu Lys Ala 325 330
335 Phe Glu Glu Ala Tyr Ala Arg Ala Asp Lys Lys Ala Pro Arg Pro Cys
340 345 350 His Lys Gly Ser
Trp Cys Ser Ser Asn Gln Leu Cys Arg Glu Cys Gln 355
360 365 Ala Phe Met Ala His Thr Met Pro Lys Leu Lys Ala
Phe Ser Met Ser 370 375 380 Ser Ala
Tyr Asn Ala Tyr Arg Ala Val Tyr Ala Val Ala His Gly Leu 385
390 395 400 His Gln Leu Leu Gly Cys Ala
Ser Gly Ala Cys Ser Arg Gly Arg Val 405
410 415 Tyr Pro Trp Gln Leu Leu Glu Gln Ile His Lys Val
His Phe Leu Leu 420 425 430
His Lys Asp Thr Val Ala Phe Asn Asp Asn Arg Asp Pro Leu Ser Ser
435 440 445 Tyr Asn Ile Ile Ala Trp Asp
Trp Asn Gly Pro Lys Trp Thr Phe Thr 450 455
460 Val Leu Gly Ser Ser Thr Trp Ser Pro Val Gln Leu Asn Ile Asn Glu
465 470 475 480 Thr Lys
Ile Gln Trp His Gly Lys Asp Asn Gln Val Pro Lys Ser Val
485 490 495 Cys Ser Ser Asp Cys Leu Glu
Gly His Gln Arg Val Val Thr Gly Phe 500 505
510 His His Cys Cys Phe Glu Cys Val Pro Cys Gly Ala Gly Thr
Phe Leu 515 520 525 Asn Lys Ser
Asp Leu Tyr Arg Cys Gln Pro Cys Gly Lys Glu Glu Trp 530
535 540 Ala Pro Glu Gly Ser Gln Thr Cys Phe Pro Arg Thr
Val Val Phe Leu 545 550 555
560 Glu Trp His Glu Ala Pro Thr Ile Ala Val Ala Leu Leu Ala Ala Leu
565 570 575 Gly Phe Leu Ser
Thr Leu Ala Ile Leu Val Ile Phe Trp Arg His Phe 580
585 590 Gln Thr Pro Ile Val Arg Ser Ala Gly Gly Pro
Met Cys Phe Leu Met 595 600 605
Leu Thr Leu Leu Leu Val Ala Tyr Met Val Val Pro Val Tyr Val Gly 610
615 620 Pro Pro Lys Val Ser Thr Cys Leu Cys
Arg Gln Ala Leu Phe Pro Leu 625 630 635
640 Cys Phe Thr Ile Cys Ile Ser Cys Ile Ala Val Arg Ser Phe
Gln Ile 645 650 655 Val
Cys Ala Phe Lys Met Ala Ser Arg Phe Pro Arg Ala Tyr Ser Tyr
660 665 670 Trp Val Arg Tyr Gln Gly Pro
Tyr Val Ser Met Ala Phe Ile Thr Val 675 680
685 Leu Lys Met Val Ile Val Val Ile Gly Met Leu Ala Thr Gly Leu
Ser 690 695 700 Pro Thr Thr Arg Thr
Asp Pro Asp Asp Pro Lys Ile Thr Ile Val Ser 705 710
715 720 Cys Asn Pro Asn Tyr Arg Asn Ser Leu Leu
Phe Asn Thr Ser Leu Asp 725 730
735 Leu Leu Leu Ser Val Val Gly Phe Ser Phe Ala Tyr Met Gly Lys Glu
740 745 750 Leu Pro Thr Asn
Tyr Asn Glu Ala Lys Phe Ile Thr Leu Ser Met Thr 755
760 765 Phe Tyr Phe Thr Ser Ser Val Ser Leu Cys Thr Phe
Met Ser Ala Tyr 770 775 780 Ser Gly
Val Leu Val Thr Ile Val Asp Leu Leu Val Thr Val Leu Asn 785
790 795 800 Leu Leu Ala Ile Ser Leu Gly
Tyr Phe Gly Pro Lys Cys Tyr Met Ile 805
810 815 Leu Phe Tyr Pro Glu Arg Asn Thr Pro Ala Tyr Phe
Asn Ser Met Ile 820 825 830
Gln Gly Tyr Thr Met Arg Arg Asp 835 840 5 374 PRT
Homo sapiens 5 Met Ala Arg Ser Leu Thr Trp Arg Cys Cys Pro Trp Cys Leu
Thr Glu 1 5 10 15 Asp
Glu Lys Ala Ala Ala Arg Val Asp Gln Glu Ile Asn Arg Ile Leu
20 25 30 Leu Glu Gln Lys Lys Gln Asp
Arg Gly Glu Leu Lys Leu Leu Leu Leu 35 40
45 Gly Pro Gly Glu Ser Gly Lys Ser Thr Phe Ile Lys Gln Met Arg
Ile 50 55 60 Ile His Gly Ala Gly
Tyr Ser Glu Glu Glu Arg Lys Gly Phe Arg Pro 65 70
75 80 Leu Val Tyr Gln Asn Ile Phe Val Ser Met
Arg Ala Met Ile Glu Ala 85 90
95 Met Glu Arg Leu Gln Ile Pro Phe Ser Arg Pro Glu Ser Lys His His
100 105 110 Ala Ser Leu Val
Met Ser Gln Asp Pro Tyr Lys Val Thr Thr Phe Glu 115
120 125 Lys Arg Tyr Ala Ala Ala Met Gln Trp Leu Trp Arg
Asp Ala Gly Ile 130 135 140 Arg Ala
Cys Tyr Glu Arg Arg Arg Glu Phe His Leu Leu Asp Ser Ala 145
150 155 160 Val Tyr Tyr Leu Ser His Leu
Glu Arg Ile Thr Glu Glu Gly Tyr Val 165
170 175 Pro Thr Ala Gln Asp Val Leu Arg Ser Arg Met Pro
Thr Thr Gly Ile 180 185 190
Asn Glu Tyr Cys Phe Ser Val Gln Lys Thr Asn Leu Arg Ile Val Asp
195 200 205 Val Gly Gly Gln Lys Ser Glu
Arg Lys Lys Trp Ile His Cys Phe Glu 210 215
220 Asn Val Ile Ala Leu Ile Tyr Leu Ala Ser Leu Ser Glu Tyr Asp Gln
225 230 235 240 Cys Leu
Glu Glu Asn Asn Gln Glu Asn Arg Met Lys Glu Ser Leu Ala
245 250 255 Leu Phe Gly Thr Ile Leu Glu
Leu Pro Trp Phe Lys Ser Thr Ser Val 260 265
270 Ile Leu Phe Leu Asn Lys Thr Asp Ile Leu Glu Glu Lys Ile
Pro Thr 275 280 285 Ser His Leu
Ala Thr Tyr Phe Pro Ser Phe Gln Gly Pro Lys Gln Asp 290
295 300 Ala Glu Ala Ala Lys Arg Phe Ile Leu Asp Met Tyr
Thr Arg Met Tyr 305 310 315
320 Thr Gly Cys Val Asp Gly Pro Glu Gly Ser Asn Leu Lys Lys Glu Asp
325 330 335 Lys Glu Ile Tyr
Ser His Met Thr Cys Ala Thr Asp Thr Gln Asn Val 340
345 350 Lys Phe Val Phe Asp Ala Val Thr Asp Ile Ile
Ile Lys Glu Asn Leu 355 360 365
Lys Asp Cys Gly Leu Phe 370 6 2526 DNA Homo sapiens 6 atgctgctct
gcacggctcg cctggtcggc ctgcagcttc tcatttcctg ctgctgggcc 60 tttgcctgcc
atagcacgga gtcttctcct gacttcaccc tccccggaga ttacctcctg 120 gcaggcctgt
tccctctcca ttctggctgt ctgcaggtga ggcacagacc cgaggtgacc 180 ctgtgtgaca
ggtcttgtag cttcaatgag catggctacc acctcttcca ggctatgcgg 240 cttggggttg
aggagataaa caactccacg gccctgctgc ccaacatcac cctggggtac 300 cagctgtatg
atgtgtgttc tgactctgcc aatgtgtatg ccacgctgag agtgctctcc 360 ctgccagggc
aacaccacat agagctccaa ggagaccttc tccactattc ccctacggtg 420 ctggcagtga
ttgggcctga cagcaccaac cgtgctgcca ccacagccgc cctgctgagc 480 cctttcctgg
tgcccatgat tagctatgcg gccagcagcg agacgctcag cgtgaagcgg 540 cagtatccct
ctttcctgcg caccatcccc aatgacaagt accaggtgga gaccatggtg 600 ctgctgctgc
agaagttcgg gtggacctgg atctctctgg ttggcagcag tgacgactat 660 gggcagctag
gggtgcaggc actggagaac caggccactg gtcaggggat ctgcattgct 720 ttcaaggaca
tcatgccctt ctctgcccag gtgggcgatg agaggatgca gtgcctcatg 780 cgccacctgg
cccaggccgg ggccaccgtc gtggttgttt tttccagccg gcagttggcc 840 agggtgtttt
tcgagtccgt ggtgctgacc aacctgactg gcaaggtgtg ggtcgcctca 900 gaagcctggg
ccctctccag gcacatcact ggggtgcccg ggatccagcg cattgggatg 960 gtgctgggcg
tggccatcca gaagagggct gtccctggcc tgaaggcgtt tgaagaagcc 1020 tatgcccggg
cagacaagaa ggcccctagg ccttgccaca agggctcctg gtgcagcagc 1080 aatcagctct
gcagagaatg ccaagctttc atggcacaca cgatgcccaa gctcaaagcc 1140 ttctccatga
gttctgccta caacgcatac cgggctgtgt atgcggtggc ccatggcctc 1200 caccagctcc
tgggctgtgc ctctggagct tgttccaggg gccgagtcta cccctggcag 1260 cttttggagc
agatccacaa ggtgcatttc cttctacaca aggacactgt ggcgtttaat 1320 gacaacagag
atcccctcag tagctataac ataattgcct gggactggaa tggacccaag 1380 tggaccttca
cggtcctcgg ttcctccaca tggtctccag ttcagctaaa cataaatgag 1440 accaaaatcc
agtggcacgg aaaggacaac caggtgccta agtctgtgtg ttccagcgac 1500 tgtcttgaag
ggcaccagcg agtggttacg ggtttccatc actgctgctt tgagtgtgtg 1560 ccctgtgggg
ctgggacctt cctcaacaag agtgacctct acagatgcca gccttgtggg 1620 aaagaagagt
gggcacctga gggaagccag acctgcttcc cgcgcactgt ggtgtttttg 1680 gctttgcgtg
agcacacctc ttgggtgctg ctggcagcta acacgctgct gctgctgctg 1740 ctgcttggga
ctgctggcct gtttgcctgg cacctagaca cccctgtggt gaggtcagca 1800 gggggccgcc
tgtgctttct tatgctgggc tccctggcag caggtagtgg cagcctctat 1860 ggcttctttg
gggaacccac aaggcctgcg tgcttgctac gccaggccct ctttgccctt 1920 ggtttcacca
tcttcctgtc ctgcctgaca gttcgctcat tccaactaat catcatcttc 1980 ttgttttcca
ccaaggtacc tacattctac cacgcctggg tccaaaacca cggtgctggc 2040 ctgtttgtga
tgatcagctc agcggcccag ctgcttatct gtctaacttg gctggtggtg 2100 tggaccccac
tgcctgctag ggaataccag cgcttccccc atctggtgat gcttgagtgc 2160 acagagacca
actccctggg cttcatactg gccttcctct acaatggcct cctctccatc 2220 agtgcctttg
cctgcagcta cctgggtaag gacttgccag agaactacaa cgaggccaaa 2280 tgtgtcacct
tcagcctgct cttcaacttc gtgtcctgga tcgccttctt caccacggcc 2340 agcgtctacg
acggcaagta cctgcctgcg gccaacatga tggctgggct gagcagcctg 2400 agcagcggct
tcggtgggta ttttctgcct aagtgctacg tgatcctctg ccgcccagac 2460 ctcaacagca
cagagcactt ccaggcctcc attcaggact acacgaggcg ctgcggctcc 2520 acctga
2526 7 841 PRT
Homo sapiens 7 Met Leu Leu Cys Thr Ala Arg Leu Val Gly Leu Gln Leu Leu
Ile Ser 1 5 10 15 Cys
Cys Trp Ala Phe Ala Cys His Ser Thr Glu Ser Ser Pro Asp Phe
20 25 30 Thr Leu Pro Gly Asp Tyr Leu
Leu Ala Gly Leu Phe Pro Leu His Ser 35 40
45 Gly Cys Leu Gln Val Arg His Arg Pro Glu Val Thr Leu Cys Asp
Arg 50 55 60 Ser Cys Ser Phe Asn
Glu His Gly Tyr His Leu Phe Gln Ala Met Arg 65 70
75 80 Leu Gly Val Glu Glu Ile Asn Asn Ser Thr
Ala Leu Leu Pro Asn Ile 85 90
95 Thr Leu Gly Tyr Gln Leu Tyr Asp Val Cys Ser Asp Ser Ala Asn Val
100 105 110 Tyr Ala Thr Leu
Arg Val Leu Ser Leu Pro Gly Gln His His Ile Glu 115
120 125 Leu Gln Gly Asp Leu Leu His Tyr Ser Pro Thr Val
Leu Ala Val Ile 130 135 140 Gly Pro
Asp Ser Thr Asn Arg Ala Ala Thr Thr Ala Ala Leu Leu Ser 145
150 155 160 Pro Phe Leu Val Pro Met Ile
Ser Tyr Ala Ala Ser Ser Glu Thr Leu 165
170 175 Ser Val Lys Arg Gln Tyr Pro Ser Phe Leu Arg Thr
Ile Pro Asn Asp 180 185 190
Lys Tyr Gln Val Glu Thr Met Val Leu Leu Leu Gln Lys Phe Gly Trp
195 200 205 Thr Trp Ile Ser Leu Val Gly
Ser Ser Asp Asp Tyr Gly Gln Leu Gly 210 215
220 Val Gln Ala Leu Glu Asn Gln Ala Thr Gly Gln Gly Ile Cys Ile Ala
225 230 235 240 Phe Lys
Asp Ile Met Pro Phe Ser Ala Gln Val Gly Asp Glu Arg Met
245 250 255 Gln Cys Leu Met Arg His Leu
Ala Gln Ala Gly Ala Thr Val Val Val 260 265
270 Val Phe Ser Ser Arg Gln Leu Ala Arg Val Phe Phe Glu Ser
Val Val 275 280 285 Leu Thr Asn
Leu Thr Gly Lys Val Trp Val Ala Ser Glu Ala Trp Ala 290
295 300 Leu Ser Arg His Ile Thr Gly Val Pro Gly Ile Gln
Arg Ile Gly Met 305 310 315
320 Val Leu Gly Val Ala Ile Gln Lys Arg Ala Val Pro Gly Leu Lys Ala
325 330 335 Phe Glu Glu Ala
Tyr Ala Arg Ala Asp Lys Lys Ala Pro Arg Pro Cys 340
345 350 His Lys Gly Ser Trp Cys Ser Ser Asn Gln Leu
Cys Arg Glu Cys Gln 355 360 365
Ala Phe Met Ala His Thr Met Pro Lys Leu Lys Ala Phe Ser Met Ser 370
375 380 Ser Ala Tyr Asn Ala Tyr Arg Ala Val
Tyr Ala Val Ala His Gly Leu 385 390 395
400 His Gln Leu Leu Gly Cys Ala Ser Gly Ala Cys Ser Arg Gly
Arg Val 405 410 415 Tyr
Pro Trp Gln Leu Leu Glu Gln Ile His Lys Val His Phe Leu Leu
420 425 430 His Lys Asp Thr Val Ala Phe
Asn Asp Asn Arg Asp Pro Leu Ser Ser 435 440
445 Tyr Asn Ile Ile Ala Trp Asp Trp Asn Gly Pro Lys Trp Thr Phe
Thr 450 455 460 Val Leu Gly Ser Ser
Thr Trp Ser Pro Val Gln Leu Asn Ile Asn Glu 465 470
475 480 Thr Lys Ile Gln Trp His Gly Lys Asp Asn
Gln Val Pro Lys Ser Val 485 490
495 Cys Ser Ser Asp Cys Leu Glu Gly His Gln Arg Val Val Thr Gly Phe
500 505 510 His His Cys Cys
Phe Glu Cys Val Pro Cys Gly Ala Gly Thr Phe Leu 515
520 525 Asn Lys Ser Asp Leu Tyr Arg Cys Gln Pro Cys Gly
Lys Glu Glu Trp 530 535 540 Ala Pro
Glu Gly Ser Gln Thr Cys Phe Pro Arg Thr Val Val Phe Leu 545
550 555 560 Ala Leu Arg Glu His Thr Ser
Trp Val Leu Leu Ala Ala Asn Thr Leu 565
570 575 Leu Leu Leu Leu Leu Leu Gly Thr Ala Gly Leu Phe
Ala Trp His Leu 580 585 590
Asp Thr Pro Val Val Arg Ser Ala Gly Gly Arg Leu Cys Phe Leu Met
595 600 605 Leu Gly Ser Leu Ala Ala Gly
Ser Gly Ser Leu Tyr Gly Phe Phe Gly 610 615
620 Glu Pro Thr Arg Pro Ala Cys Leu Leu Arg Gln Ala Leu Phe Ala Leu
625 630 635 640 Gly Phe
Thr Ile Phe Leu Ser Cys Leu Thr Val Arg Ser Phe Gln Leu
645 650 655 Ile Ile Ile Phe Lys Phe Ser
Thr Lys Val Pro Thr Phe Tyr His Ala 660 665
670 Trp Val Gln Asn His Gly Ala Gly Leu Phe Val Met Ile Ser
Ser Ala 675 680 685 Ala Gln Leu
Leu Ile Cys Leu Thr Trp Leu Val Val Trp Thr Pro Leu 690
695 700 Pro Ala Arg Glu Tyr Gln Arg Phe Pro His Leu Val
Met Leu Glu Cys 705 710 715
720 Thr Glu Thr Asn Ser Leu Gly Phe Ile Leu Ala Phe Leu Tyr Asn Gly
725 730 735 Leu Leu Ser Ile
Ser Ala Phe Ala Cys Ser Tyr Leu Gly Lys Asp Leu 740
745 750 Pro Glu Asn Tyr Asn Glu Ala Lys Cys Val Thr
Phe Ser Leu Leu Phe 755 760 765
Asn Phe Val Ser Trp Ile Ala Phe Phe Thr Thr Ala Ser Val Tyr Asp 770
775 780 Gly Lys Tyr Leu Pro Ala Ala Asn Met
Met Ala Gly Leu Ser Ser Leu 785 790 795
800 Ser Ser Gly Phe Gly Gly Tyr Phe Leu Pro Lys Cys Tyr Val
Ile Leu 805 810 815 Cys
Arg Pro Asp Leu Asn Ser Thr Glu His Phe Gln Ala Ser Ile Gln
820 825 830 Asp Tyr Thr Arg Arg Cys Gly
Ser Thr 835 840 8 2523 DNA Rattus sp. 8
atgctcttct gggctgctca cctgctgctc agcctgcagt tggtctactg ctgggctttc 60
agctgccaaa ggacagagtc ctctccaggc ttcagccttc ctggggactt cctccttgca 120
ggtctgttct ccctccatgg tgactgtctg caggtgagac acagacctct ggtgacaagt 180
tgtgacaggc ccgacagctt caacggccat ggctaccacc tcttccaagc catgcggttc 240
actgttgagg agataaacaa ctcctcggcc ctgcttccca acatcaccct ggggtatgag 300
ctgtacgacg tgtgctcaga atctgccaat gtgtatgcca ccctgagggt gcttgccctg 360
caagggcccc gccacataga gatacagaaa gaccttcgca accactcctc caaggtggtg 420
gccttcatcg ggcctgacaa cactgaccac gctgtcacta ccgctgcctt gctgggtcct 480
ttcctgatgc ccctggtcag ctatgaggca agcagcgtgg tactcagtgc caagcgcaag 540
ttcccgtctt tccttcgtac cgtccccagt gaccggcacc aggtggaggt catggtgcag 600
ctgctgcaga gttttgggtg ggtgtggatc tcgctcattg gcagctacgg tgattacggg 660
cagctgggtg tgcaggcgct ggaggagctg gccgtgcccc ggggcatctg cgtcgccttc 720
aaggacatcg tgcctttctc tgcccgggtg ggtgacccga ggatgcagag catgatgcag 780
catctggctc aggccaggac caccgtggtt gtggtcttct ctaaccggca cctggctaga 840
gtgttcttca ggtccgtggt gctggccaac ctgactggca aagtgtgggt cgcctcagaa 900
gactgggcca tctccacgta catcaccagc gtgactggga tccaaggcat tgggacggtg 960
ctcggtgtgg ccgtccagca gagacaagtc cctgggctga aggagtttga ggagtcttat 1020
gtcagggctg taacagctgc tcccagcgct tgcccggagg ggtcctggtg cagcactaac 1080
cagctgtgcc gggagtgcca cacgttcacg actcgtaaca tgcccacgct tggagccttc 1140
tccatgagtg ccgcctacag agtgtatgag gctgtgtacg ctgtggccca cggcctccac 1200
cagctcctgg gatgtacttc tgagatctgt tccagaggcc cagtctaccc ctggcagctt 1260
cttcagcaga tctacaaggt gaattttctt ctacatgaga atactgtggc atttgatgac 1320
aacggggaca ctctaggtta ctacgacatc atcgcctggg actggaatgg acctgaatgg 1380
acctttgaga tcattggctc tgcctcactg tctccagttc atctggacat aaataagaca 1440
aaaatccagt ggcacgggaa gaacaatcag gtgcctgtgt cagtgtgtac cacggactgt 1500
ctggcagggc accacagggt ggttgtgggt tcccaccact gctgctttga gtgtgtgccc 1560
tgcgaagctg ggacctttct caacatgagt gagcttcaca tctgccagcc ttgtggaaca 1620
gaagaatggg cacccaagga gagcactact tgcttcccac gcacggtgga gttcttggct 1680
tggcatgaac ccatctcttt ggtgctaata gcagctaaca cgctattgct gctgctgctg 1740
gttgggactg ctggcctgtt tgcctggcat tttcacacac ctgtagtgag gtcagctggg 1800
ggtaggctgt gcttcctcat gctgggttcc ctggtggccg gaagttgcag cttctatagc 1860
ttcttcgggg agcccacggt gcccgcgtgc ttgctgcgtc agcccctctt ttctctcggg 1920
tttgccatct tcctctcctg cctgacaatc cgctccttcc aactggtcat catcttcaag 1980
ttttctacca aggtgcccac attctaccgt acctgggccc aaaaccatgg tgcaggtcta 2040
ttcgtcattg tcagctccac ggtccatttg ctcatctgtc tcacatggct tgtaatgtgg 2100
accccacgac ccaccaggga ataccagcgc ttcccccatc tggtgattct cgagtgcaca 2160
gaggtcaact ctgtaggctt cctgttggct ttcacccaca acattctcct ctccatcagt 2220
accttcgtct gcagctacct gggtaaggaa ctgccagaga actataatga agccaaatgt 2280
gtcaccttca gcctgctcct caacttcgta tcctggatcg ccttcttcac catggccagc 2340
atttaccagg gcagctacct gcctgcggtc aatgtgctgg cagggctgac cacactgagc 2400
ggcggcttca gcggttactt cctccccaag tgctatgtga ttctctgccg tccagaactc 2460
aacaatacag aacactttca ggcctccatc caggactaca cgaggcgctg cggcactacc 2520
tga 2523
9 840 PRT Rattus sp. 9 Met Leu Phe Trp Ala Ala His Leu Leu Leu Ser Leu
Gln Leu Val Tyr 1 5 10
15 Cys Trp Ala Phe Ser Cys Gln Arg Thr Glu Ser Ser Pro Gly Phe Ser
20 25 30 Leu Pro Gly Asp Phe Leu
Leu Ala Gly Leu Phe Ser Leu His Gly Asp 35 40
45 Cys Leu Gln Val Arg His Arg Pro Leu Val Thr Ser Cys Asp
Arg Pro 50 55 60 Asp Ser Phe Asn
Gly His Gly Tyr His Leu Phe Gln Ala Met Arg Phe 65 70
75 80 Thr Val Glu Glu Ile Asn Asn Ser Ser
Ala Leu Leu Pro Asn Ile Thr 85 90
95 Leu Gly Tyr Glu Leu Tyr Asp Val Cys Ser Glu Ser Ala Asn Val
Tyr 100 105 110 Ala Thr Leu
Arg Val Leu Ala Leu Gln Gly Pro Arg His Ile Glu Ile 115
120 125 Gln Lys Asp Leu Arg Asn His Ser Ser Lys Val
Val Ala Phe Ile Gly 130 135 140 Pro
Asp Asn Thr Asp His Ala Val Thr Thr Ala Ala Leu Leu Gly Pro 145
150 155 160 Phe Leu Met Pro Leu Val
Ser Tyr Glu Ala Ser Ser Val Val Leu Ser 165
170 175 Ala Lys Arg Lys Phe Pro Ser Phe Leu Arg Thr Val
Pro Ser Asp Arg 180 185 190
His Gln Val Glu Val Met Val Gln Leu Leu Gln Ser Phe Gly Trp Val
195 200 205 Trp Ile Ser Leu Ile Gly Ser
Tyr Gly Asp Tyr Gly Gln Leu Gly Val 210 215
220 Gln Ala Leu Glu Glu Leu Ala Val Pro Arg Gly Ile Cys Val Ala Phe
225 230 235 240 Lys Asp
Ile Val Pro Phe Ser Ala Arg Val Gly Asp Pro Arg Met Gln
245 250 255 Ser Met Met Gln His Leu Ala
Gln Ala Arg Thr Thr Val Val Val Val 260 265
270 Phe Ser Asn Arg His Leu Ala Arg Val Phe Phe Arg Ser Val
Val Leu 275 280 285 Ala Asn Leu
Thr Gly Lys Val Trp Val Ala Ser Glu Asp Trp Ala Ile 290
295 300 Ser Thr Tyr Ile Thr Ser Val Thr Gly Ile Gln Gly
Ile Gly Thr Val 305 310 315
320 Leu Gly Val Ala Val Gln Gln Arg Gln Val Pro Gly Leu Lys Glu Phe
325 330 335 Glu Glu Ser Tyr
Val Arg Ala Val Thr Ala Ala Pro Ser Ala Cys Pro 340
345 350 Glu Gly Ser Trp Cys Ser Thr Asn Gln Leu Cys
Arg Glu Cys His Thr 355 360 365
Phe Thr Thr Arg Asn Met Pro Thr Leu Gly Ala Phe Ser Met Ser Ala 370
375 380 Ala Tyr Arg Val Tyr Glu Ala Val Tyr
Ala Val Ala His Gly Leu His 385 390 395
400 Gln Leu Leu Gly Cys Thr Ser Glu Ile Cys Ser Arg Gly Pro
Val Tyr 405 410 415 Pro
Trp Gln Leu Leu Gln Gln Ile Tyr Lys Val Asn Phe Leu Leu His
420 425 430 Glu Asn Thr Val Ala Phe Asp
Asp Asn Gly Asp Thr Leu Gly Tyr Tyr 435 440
445 Asp Ile Ile Ala Trp Asp Trp Asn Gly Pro Glu Trp Thr Phe Glu
Ile 450 455 460 Ile Gly Ser Ala Ser
Leu Ser Pro Val His Leu Asp Ile Asn Lys Thr 465 470
475 480 Lys Ile Gln Trp His Gly Lys Asn Asn Gln
Val Pro Val Ser Val Cys 485 490
495 Thr Thr Asp Cys Leu Ala Gly His His Arg Val Val Val Gly Ser His
500 505 510 His Cys Cys Phe
Glu Cys Val Pro Cys Glu Ala Gly Thr Phe Leu Asn 515
520 525 Met Ser Glu Leu His Ile Cys Gln Pro Cys Gly Thr
Glu Glu Trp Ala 530 535 540 Pro Lys
Glu Ser Thr Thr Cys Phe Pro Arg Thr Val Glu Phe Leu Ala 545
550 555 560 Trp His Glu Pro Ile Ser Leu
Val Leu Ile Ala Ala Asn Thr Leu Leu 565
570 575 Leu Leu Leu Leu Val Gly Thr Ala Gly Leu Phe Ala
Trp His Phe His 580 585 590
Thr Pro Val Val Arg Ser Ala Gly Gly Arg Leu Cys Phe Leu Met Leu
595 600 605 Gly Ser Leu Val Ala Gly Ser
Cys Ser Phe Tyr Ser Phe Phe Gly Glu 610 615
620 Pro Thr Val Pro Ala Cys Leu Leu Arg Gln Pro Leu Phe Ser Leu Gly
625 630 635 640 Phe Ala
Ile Phe Leu Ser Cys Leu Thr Ile Arg Ser Phe Gln Leu Val
645 650 655 Ile Ile Phe Lys Phe Ser Thr
Lys Val Pro Thr Phe Tyr Arg Thr Trp 660 665
670 Ala Gln Asn His Gly Ala Gly Leu Phe Val Ile Val Ser Ser
Thr Val 675 680 685 His Leu Leu
Ile Cys Leu Thr Trp Leu Val Met Trp Thr Pro Arg Pro 690
695 700 Thr Arg Glu Tyr Gln Arg Phe Pro His Leu Val Ile
Leu Glu Cys Thr 705 710 715
720 Glu Val Asn Ser Val Gly Phe Leu Leu Ala Phe Thr His Asn Ile Leu
725 730 735 Leu Ser Ile Ser
Thr Phe Val Cys Ser Tyr Leu Gly Lys Glu Leu Pro 740
745 750 Glu Asn Tyr Asn Glu Ala Lys Cys Val Thr Phe
Ser Leu Leu Leu Asn 755 760 765
Phe Val Ser Trp Ile Ala Phe Phe Thr Met Ala Ser Ile Tyr Gln Gly 770
775 780 Ser Tyr Leu Pro Ala Val Asn Val Leu
Ala Gly Leu Thr Thr Leu Ser 785 790 795
800 Gly Gly Phe Ser Gly Tyr Phe Leu Pro Lys Cys Tyr Val Ile
Leu Cys 805 810 815 Arg
Pro Glu Leu Asn Asn Thr Glu His Phe Gln Ala Ser Ile Gln Asp
820 825 830 Tyr Thr Arg Arg Cys Gly Thr
Thr 835 840 10 2520 DNA Homo sapiens 10
atggggccca gggcaaagac catctgctcc ctgttcttcc tcctatgggt cctggctgag 60
ccggctgaga actcggactt ctacctgcct ggggattacc tcctgggtgg cctcttctcc 120
ctccatgcca acatgaaggg cattgttcac cttaacttcc tgcaggtgcc catgtgcaag 180
gagtatgaag tgaaggtgat aggctacaac ctcatgcagg ccatgcgctt cgcggtggag 240
gagatcaaca atgacagcag cctgctgcct ggtgtgctgc tgggctatga gatcgtggat 300
gtgtgctaca tctccaacaa tgtccagccg gtgctctact tcctggcaca cgaggacaac 360
ctccttccca tccaagagga ctacagtaac tacatttccc gtgtggtggc tgtcattggc 420
cctgacaact ccgagtctgt catgactgtg gccaacttcc tctccctatt tctccttcca 480
cagatcacct acagcgccat cagcgatgag ctgcgagaca aggtgcgctt cccggctttg 540
ctgcgtacca cacccagcgc cgaccaccac gtcgaggcca tggtgcagct gatgctgcac 600
ttccgctgga actggatcat tgtgctggtg agcagcgaca cctatggccg cgacaatggc 660
cagctgcttg gcgagcgcgt ggcccggcgc gacatctgca tcgccttcca ggagacgctg 720
cccacactgc agcccaacca gaacatgacg tcagaggagc gccagcgcct ggtgaccatt 780
gtggacaagc tgcagcagag cacagcgcgc gtcgtggtcg tgttctcgcc cgacctgacc 840
ctgtaccact tcttcaatga ggtgctgcgc cagaacttca cgggcgccgt gtggatcgcc 900
tccgagtcct gggccatcga cccggtcctg cacaacctca cggagctggg ccacttgggc 960
accttcctgg gcatcaccat ccagagcgtg cccatcccgg gcttcagtga gttccgcgag 1020
tggggcccac aggctgggcc gccacccctc agcaggacca gccagagcta tacctgcaac 1080
caggagtgcg acaactgcct gaacgccacc ttgtccttca acaccattct caggctctct 1140
ggggagcgtg tcgtctacag cgtgtactct gcggtctatg ctgtggccca tgccctgcac 1200
agcctcctcg gctgtgacaa aagcacctgc accaagaggg tggtctaccc ctggcagctg 1260
cttgaggaga tctggaaggt caacttcact ctcctggacc accaaatctt cttcgacccg 1320
caaggggacg tggctctgca cttggagatt gtccagtggc aatgggaccg gagccagaat 1380
cccttccaga gcgtcgcctc ctactacccc ctgcagcgac agctgaagaa catccaagac 1440
atctcctggc acaccgtcaa caacacgatc cctatgtcca tgtgttccaa gaggtgccag 1500
tcagggcaaa agaagaagcc tgtgggcatc cacgtctgct gcttcgagtg catcgactgc 1560
cttcccggca ccttcctcaa ccacactgaa gatgaatatg aatgccaggc ctgcccgaat 1620
aacgagtggt cctaccagag tgagacctcc tgcttcaagc ggcagctggt cttcctggaa 1680
tggcatgagg cacccaccat cgctgtggcc ctgctggccg ccctgggctt cctcagcacc 1740
ctggccatcc tggtgatatt ctggaggcac ttccagacac ccatagttcg ctcggctggg 1800
ggccccatgt gcttcctgat gctgacactg ctgctggtgg catacatggt ggtcccggtc 1860
tacgtggggc cgcccaaggt ctccacctgc ctctgccgcc aggccctctt tcccctctgc 1920
ttcacaattt gcatctcctg tatcgccgtg cgttctttcc agatcgtctg cgccttcaag 1980
atggccagcc gcttcccacg cgcctacagc tactgggtcc gctaccaggg gccctacgtc 2040
tctatggcat ttatcacggt actcaaaatg gtcattgtgg taattggcat gctggccacg 2100
ggcctcagtc ccaccacccg tactgacccc gatgacccca agatcacaat tgtctcctgt 2160
aaccccaact accgcaacag cctgctgttc aacaccagcc tggacctgct gctctcagtg 2220
gtgggtttca gcttcgccta catgggcaaa gagctgccca ccaactacaa cgaggccaag 2280
ttcatcaccc tcagcatgac cttctatttc acctcatccg tctccctctg caccttcatg 2340
tctgcctaca gcggggtgct ggtcaccatc gtggacctct tggtcactgt gctcaacctc 2400
ctggccatca gcctgggcta cttcggcccc aagtgctaca tgatcctctt ctacccggag 2460
cgcaacacgc ccgcctactt caacagcatg atccagggct acaccatgag gagggactag 2520
11 839 PRT Homo sapiens 11 Met Gly Pro Arg Ala Lys Thr Ile Cys Ser Leu
Phe Phe Leu Leu Trp 1 5 10
15 Val Leu Ala Glu Pro Ala Glu Asn Ser Asp Phe Tyr Leu Pro Gly Asp
20 25 30 Tyr Leu Leu Gly Gly
Leu Phe Ser Leu His Ala Asn Met Lys Gly Ile 35
40 45 Val His Leu Asn Phe Leu Gln Val Pro Met Cys Lys
Glu Tyr Glu Val 50 55 60 Lys Val
Ile Gly Tyr Asn Leu Met Gln Ala Met Arg Phe Ala Val Glu 65
70 75 80 Glu Ile Asn Asn Asp Ser Ser
Leu Leu Pro Gly Val Leu Leu Gly Tyr 85
90 95 Glu Ile Val Asp Val Cys Tyr Ile Ser Asn Asn Val
Gln Pro Val Leu 100 105 110
Tyr Phe Leu Ala His Glu Asp Asn Leu Leu Pro Ile Gln Glu Asp Tyr
115 120 125 Ser Asn Tyr Ile Ser Arg Val
Val Ala Val Ile Gly Pro Asp Asn Ser 130 135
140 Glu Ser Val Met Thr Val Ala Asn Phe Leu Ser Leu Phe Leu Leu Pro
145 150 155 160 Gln Ile
Thr Tyr Ser Ala Ile Ser Asp Glu Leu Arg Asp Lys Val Arg
165 170 175 Phe Pro Ala Leu Leu Arg Thr
Thr Pro Ser Ala Asp His His Val Glu 180 185
190 Ala Met Val Gln Leu Met Leu His Phe Arg Trp Asn Trp Ile
Ile Val 195 200 205 Leu Val Ser
Ser Asp Thr Tyr Gly Arg Asp Asn Gly Gln Leu Leu Gly 210
215 220 Glu Arg Val Ala Arg Arg Asp Ile Cys Ile Ala Phe
Gln Glu Thr Leu 225 230 235
240 Pro Thr Leu Gln Pro Asn Gln Asn Met Thr Ser Glu Glu Arg Gln Arg
245 250 255 Leu Val Thr Ile
Val Asp Lys Leu Gln Gln Ser Thr Ala Arg Val Val 260
265 270 Val Val Phe Ser Pro Asp Leu Thr Leu Tyr His
Phe Phe Asn Glu Val 275 280 285
Leu Arg Gln Asn Phe Thr Gly Ala Val Trp Ile Ala Ser Glu Ser Trp 290
295 300 Ala Ile Asp Pro Val Leu His Asn Leu
Thr Glu Leu Gly His Leu Gly 305 310 315
320 Thr Phe Leu Gly Ile Thr Ile Gln Ser Val Pro Ile Pro Gly
Phe Ser 325 330 335 Glu
Phe Arg Glu Trp Gly Pro Gln Ala Gly Pro Pro Pro Leu Ser Arg
340 345 350 Thr Ser Gln Ser Tyr Thr Cys
Asn Gln Glu Cys Asp Asn Cys Leu Asn 355 360
365 Ala Thr Leu Ser Phe Asn Thr Ile Leu Arg Leu Ser Gly Glu Arg
Val 370 375 380 Val Tyr Ser Val Tyr
Ser Ala Val Tyr Ala Val Ala His Ala Leu His 385 390
395 400 Ser Leu Leu Gly Cys Asp Lys Ser Thr Cys
Thr Lys Arg Val Val Tyr 405 410
415 Pro Trp Gln Leu Leu Glu Glu Ile Trp Lys Val Asn Phe Thr Leu Leu
420 425 430 Asp His Gln Ile
Phe Phe Asp Pro Gln Gly Asp Val Ala Leu His Leu 435
440 445 Glu Ile Val Gln Trp Gln Trp Asp Arg Ser Gln Asn
Pro Phe Gln Ser 450 455 460 Val Ala
Ser Tyr Tyr Pro Leu Gln Arg Gln Leu Lys Asn Ile Gln Asp 465
470 475 480 Ile Ser Trp His Thr Val Asn
Asn Thr Ile Pro Met Ser Met Cys Ser 485
490 495 Lys Arg Cys Gln Ser Gly Gln Lys Lys Lys Pro Val
Gly Ile His Val 500 505 510
Cys Cys Phe Glu Cys Ile Asp Cys Leu Pro Gly Thr Phe Leu Asn His
515 520 525 Thr Glu Asp Glu Tyr Glu Cys
Gln Ala Cys Pro Asn Asn Glu Trp Ser 530 535
540 Tyr Gln Ser Glu Thr Ser Cys Phe Lys Arg Gln Leu Val Phe Leu Glu
545 550 555 560 Trp His
Glu Ala Pro Thr Ile Ala Val Ala Leu Leu Ala Ala Leu Gly
565 570 575 Phe Leu Ser Thr Leu Ala Ile
Leu Val Ile Phe Trp Arg His Phe Gln 580 585
590 Thr Pro Ile Val Arg Ser Ala Gly Gly Pro Met Cys Phe Leu
Met Leu 595 600 605 Thr Leu Leu
Leu Val Ala Tyr Met Val Val Pro Val Tyr Val Gly Pro 610
615 620 Pro Lys Val Ser Thr Cys Leu Cys Arg Gln Ala Leu
Phe Pro Leu Cys 625 630 635
640 Phe Thr Ile Cys Ile Ser Cys Ile Ala Val Arg Ser Phe Gln Ile Val
645 650 655 Cys Ala Phe Lys
Met Ala Ser Arg Phe Pro Arg Ala Tyr Ser Tyr Trp 660
665 670 Val Arg Tyr Gln Gly Pro Tyr Val Ser Met Ala
Phe Ile Thr Val Leu 675 680 685
Lys Met Val Ile Val Val Ile Gly Met Leu Ala Thr Gly Leu Ser Pro 690
695 700 Thr Thr Arg Thr Asp Pro Asp Asp Pro
Lys Ile Thr Ile Val Ser Cys 705 710 715
720 Asn Pro Asn Tyr Arg Asn Ser Leu Leu Phe Asn Thr Ser Leu
Asp Leu 725 730 735 Leu
Leu Ser Val Val Gly Phe Ser Phe Ala Tyr Met Gly Lys Glu Leu
740 745 750 Pro Thr Asn Tyr Asn Glu Ala
Lys Phe Ile Thr Leu Ser Met Thr Phe 755 760
765 Tyr Phe Thr Ser Ser Val Ser Leu Cys Thr Phe Met Ser Ala Tyr
Ser 770 775 780 Gly Val Leu Val Thr
Ile Val Asp Leu Leu Val Thr Val Leu Asn Leu 785 790
795 800 Leu Ala Ile Ser Leu Gly Tyr Phe Gly Pro
Lys Cys Tyr Met Ile Leu 805 810
815 Phe Tyr Pro Glu Arg Asn Thr Pro Ala Tyr Phe Asn Ser Met Ile Gln
820 825 830 Gly Tyr Thr Met
Arg Arg Asp 835 12 2529 DNA Rattus sp. 12 atgggtcccc aggcaaggac
actctgcttg ctgtctctcc tgctgcatgt tctgcctaag 60 ccaggcaagc tggtagagaa
ctctgacttc cacctggccg gggactacct cctgggtggc 120 ctctttaccc tccatgccaa
cgtgaagagc atctcccacc tcagctacct gcaggtgccc 180 aagtgcaatg agttcaccat
gaaggtgttg ggctacaacc tcatgcaggc catgcgtttc 240 gctgtggagg agatcaacaa
ctgtagctcc ctgctacccg gcgtgctgct cggctacgag 300 atggtggatg tctgttacct
ctccaacaat atccaccctg ggctctactt cctggcacag 360 gacgacgacc tcctgcccat
cctcaaagac tacagccagt acatgcccca cgtggtggct 420 gtcattggcc ccgacaactc
tgagtccgcc attaccgtgt ccaacattct ctctcatttc 480 ctcatcccac agatcacata
cagcgccatc tccgacaagc tgcgggacaa gcggcacttc 540 cctagcatgc tacgcacagt
gcccagcgcc acccaccaca tcgaggccat ggtgcagctg 600 atggttcact tccaatggaa
ctggattgtg gtgctggtga gcgacgacga ttacggccgc 660 gagaacagcc acctgttgag
ccagcgtctg accaaaacga gcgacatctg cattgccttc 720 caggaggttc tgcccatacc
tgagtccagc caggtcatga ggtccgagga gcagagacaa 780 ctggacaaca tcctggacaa
gctgcggcgg acctcggcgc gcgtcgtggt ggtgttctcg 840 cccgagctga gcctgtatag
cttctttcac gaggtgctcc gctggaactt cacgggtttt 900 gtgtggatcg cctctgagtc
ctgggctatc gacccagttc tgcataacct cacggagctg 960 cgccacacgg gtacttttct
gggcgtcacc atccagaggg tgtccatccc tggcttcagt 1020 cagttccgag tgcgccgtga
caagccaggg tatcccgtgc ctaacacgac caacctgcgg 1080 acgacctgca accaggactg
tgacgcctgc ttgaacacca ccaagtcctt caacaacatc 1140 cttatacttt cgggggagcg
cgtggtctac agcgtgtact cggcagttta cgcggtggcc 1200 catgccctcc acagactcct
cggctgtaac cgggtccgct gcaccaagca aaaggtctac 1260 ccgtggcagc tactcaggga
gatctggcac gtcaacttca cgctcctggg taaccggctc 1320 ttctttgacc aacaagggga
catgccgatg ctcttggaca tcatccagtg gcagtgggac 1380 ctgagccaga atcccttcca
aagcatcgcc tcctattctc ccaccagcaa gaggctaacc 1440 tacattaaca atgtgtcctg
gtacaccccc aacaacacgg tccctgtctc catgtgttcc 1500 aagagctgcc agccagggca
aatgaaaaag tctgtgggcc tccacccttg ttgcttcgag 1560 tgcttggatt gtatgccagg
cacctacctc aaccgctcag cagatgagtt taactgtctg 1620 tcctgcccgg gttccatgtg
gtcctacaag aacgacatca cttgcttcca gcggcggcct 1680 accttcctgg agtggcacga
agtgcccacc atcgtggtgg ccatactggc tgccctgggc 1740 ttcttcagta cactggccat
tcttttcatc ttctggagac atttccagac acccatggtg 1800 cgctcggccg gtggccccat
gtgcttcctg atgctcgtgc ccctgctgct ggcgtttggg 1860 atggtgcccg tgtatgtggg
gccccccacg gtcttctcat gcttctgccg acaggctttc 1920 ttcaccgtct gcttctccat
ctgcctatcc tgcatcaccg tgcgctcctt ccagatcgtg 1980 tgtgtcttca agatggccag
acgcctgcca agtgcctaca gtttttggat gcgttaccac 2040 gggccctatg tcttcgtggc
cttcatcacg gccatcaagg tggccctggt ggtgggcaac 2100 atgctggcca ccaccatcaa
ccccattggc cggaccgacc cggatgaccc caacatcatg 2160 atcctctcgt gccaccctaa
ctaccgcaac gggctactgt tcaacaccag catggacttg 2220 ctgctgtctg tgctgggttt
cagcttcgct tacatgggca aggagctgcc caccaactac 2280 aacgaagcca agttcatcac
tctcagcatg accttctcct tcacctcctc catctccctc 2340 tgcaccttca tgtctgtgca
cgacggcgtg ctggtcacca tcatggacct cctggtcact 2400 gtgctcaact tcctggccat
cggcttggga tactttggcc ccaagtgtta catgatcctt 2460 ttctacccgg agcgcaacac
ctcagcctat ttcaatagca tgatccaggg ctacaccatg 2520 aggaagagc
2529 13 843 PRT Rattus sp.
13 Met Gly Pro Gln Ala Arg Thr Leu Cys Leu Leu Ser Leu Leu Leu His 1
5 10 15 Val Leu Pro Lys Pro
Gly Lys Leu Val Glu Asn Ser Asp Phe His Leu 20
25 30 Ala Gly Asp Tyr Leu Leu Gly Gly Leu Phe Thr Leu
His Ala Asn Val 35 40 45 Lys
Ser Ile Ser His Leu Ser Tyr Leu Gln Val Pro Lys Cys Asn Glu 50
55 60 Phe Thr Met Lys Val Leu Gly Tyr Asn Leu
Met Gln Ala Met Arg Phe 65 70 75
80 Ala Val Glu Glu Ile Asn Asn Cys Ser Ser Leu Leu Pro Gly Val
Leu 85 90 95 Leu Gly
Tyr Glu Met Val Asp Val Cys Tyr Leu Ser Asn Asn Ile His 100
105 110 Pro Gly Leu Tyr Phe Leu Ala Gln Asp
Asp Asp Leu Leu Pro Ile Leu 115 120
125 Lys Asp Tyr Ser Gln Tyr Met Pro His Val Val Ala Val Ile Gly Pro
130 135 140 Asp Asn Ser Glu Ser Ala Ile
Thr Val Ser Asn Ile Leu Ser His Phe 145 150
155 160 Leu Ile Pro Gln Ile Thr Tyr Ser Ala Ile Ser Asp
Lys Leu Arg Asp 165 170
175 Lys Arg His Phe Pro Ser Met Leu Arg Thr Val Pro Ser Ala Thr His
180 185 190 His Ile Glu Ala Met Val
Gln Leu Met Val His Phe Gln Trp Asn Trp 195 200
205 Ile Val Val Leu Val Ser Asp Asp Asp Tyr Gly Arg Glu Asn
Ser His 210 215 220 Leu Leu Ser Gln
Arg Leu Thr Lys Thr Ser Asp Ile Cys Ile Ala Phe 225 230
235 240 Gln Glu Val Leu Pro Ile Pro Glu Ser
Ser Gln Val Met Arg Ser Glu 245 250
255 Glu Gln Arg Gln Leu Asp Asn Ile Leu Asp Lys Leu Arg Arg Thr
Ser 260 265 270 Ala Arg Val
Val Val Val Phe Ser Pro Glu Leu Ser Leu Tyr Ser Phe 275
280 285 Phe His Glu Val Leu Arg Trp Asn Phe Thr Gly
Phe Val Trp Ile Ala 290 295 300 Ser
Glu Ser Trp Ala Ile Asp Pro Val Leu His Asn Leu Thr Glu Leu 305
310 315 320 Arg His Thr Gly Thr Phe
Leu Gly Val Thr Ile Gln Arg Val Ser Ile 325
330 335 Pro Gly Phe Ser Gln Phe Arg Val Arg Arg Asp Lys
Pro Gly Tyr Pro 340 345 350
Val Pro Asn Thr Thr Asn Leu Arg Thr Thr Cys Asn Gln Asp Cys Asp
355 360 365 Ala Cys Leu Asn Thr Thr Lys
Ser Phe Asn Asn Ile Leu Ile Leu Ser 370 375
380 Gly Glu Arg Val Val Tyr Ser Val Tyr Ser Ala Val Tyr Ala Val Ala
385 390 395 400 His Ala
Leu His Arg Leu Leu Gly Cys Asn Arg Val Arg Cys Thr Lys
405 410 415 Gln Lys Val Tyr Pro Trp Gln
Leu Leu Arg Glu Ile Trp His Val Asn 420 425
430 Phe Thr Leu Leu Gly Asn Arg Leu Phe Phe Asp Gln Gln Gly
Asp Met 435 440 445 Pro Met Leu
Leu Asp Ile Ile Gln Trp Gln Trp Asp Leu Ser Gln Asn 450
455 460 Pro Phe Gln Ser Ile Ala Ser Tyr Ser Pro Thr Ser
Lys Arg Leu Thr 465 470 475
480 Tyr Ile Asn Asn Val Ser Trp Tyr Thr Pro Asn Asn Thr Val Pro Val
485 490 495 Ser Met Cys Ser
Lys Ser Cys Gln Pro Gly Gln Met Lys Lys Ser Val 500
505 510 Gly Leu His Pro Cys Cys Phe Glu Cys Leu Asp
Cys Met Pro Gly Thr 515 520 525
Tyr Leu Asn Arg Ser Ala Asp Glu Phe Asn Cys Leu Ser Cys Pro Gly 530
535 540 Ser Met Trp Ser Tyr Lys Asn Asp Ile
Thr Cys Phe Gln Arg Arg Pro 545 550 555
560 Thr Phe Leu Glu Trp His Glu Val Pro Thr Ile Val Val Ala
Ile Leu 565 570 575 Ala
Ala Leu Gly Phe Phe Ser Thr Leu Ala Ile Leu Phe Ile Phe Trp
580 585 590 Arg His Phe Gln Thr Pro Met
Val Arg Ser Ala Gly Gly Pro Met Cys 595 600
605 Phe Leu Met Leu Val Pro Leu Leu Leu Ala Phe Gly Met Val Pro
Val 610 615 620 Tyr Val Gly Pro Pro
Thr Val Phe Ser Cys Phe Cys Arg Gln Ala Phe 625 630
635 640 Phe Thr Val Cys Phe Ser Ile Cys Leu Ser
Cys Ile Thr Val Arg Ser 645 650
655 Phe Gln Ile Val Cys Val Phe Lys Met Ala Arg Arg Leu Pro Ser Ala
660 665 670 Tyr Ser Phe Trp
Met Arg Tyr His Gly Pro Tyr Val Phe Val Ala Phe 675
680 685 Ile Thr Ala Ile Lys Val Ala Leu Val Val Gly Asn
Met Leu Ala Thr 690 695 700 Thr Ile
Asn Pro Ile Gly Arg Thr Asp Pro Asp Asp Pro Asn Ile Met 705
710 715 720 Ile Leu Ser Cys His Pro Asn
Tyr Arg Asn Gly Leu Leu Phe Asn Thr 725
730 735 Ser Met Asp Leu Leu Leu Ser Val Leu Gly Phe Ser
Phe Ala Tyr Met 740 745 750
Gly Lys Glu Leu Pro Thr Asn Tyr Asn Glu Ala Lys Phe Ile Thr Leu
755 760 765 Ser Met Thr Phe Ser Phe Thr
Ser Ser Ile Ser Leu Cys Thr Phe Met 770 775
780 Ser Val His Asp Gly Val Leu Val Thr Ile Met Asp Leu Leu Val Thr
785 790 795 800 Val Leu
Asn Phe Leu Ala Ile Gly Leu Gly Tyr Phe Gly Pro Lys Cys
805 810 815 Tyr Met Ile Leu Phe Tyr Pro
Glu Arg Asn Thr Ser Ala Tyr Phe Asn 820 825
830 Ser Met Ile Gln Gly Tyr Thr Met Arg Lys Ser 835
840 14 2559 DNA Homo sapiens 14 atgctgggcc ctgctgtcct
gggcctcagc ctctgggctc tcctgcaccc tgggacgggg 60 gccccattgt gcctgtcaca
gcaacttagg atgaaggggg actacgtgct gggggggctg 120 ttccccctgg gcgaggccga
ggaggctggc ctccgcagcc ggacacggcc cagcagccct 180 gtgtgcacca ggttctcctc
aaacggcctg ctctgggcac tggccatgaa aatggccgtg 240 gaggagatca acaacaagtc
ggatctgctg cccgggctgc gcctgggcta cgacctcttt 300 gatacgtgct cggagcctgt
ggtggccatg aagcccagcc tcatgttcct ggccaaggca 360 ggcagccgcg acatcgccgc
ctactgcaac tacacgcagt accagccccg tgtgctggct 420 gtcatcgggc cccactcgtc
agagctcgcc atggtcaccg gcaagttctt cagcttcttc 480 ctcatgcccc aggtcagcta
cggtgctagc atggagctgc tgagcgcccg ggagaccttc 540 ccctccttct tccgcaccgt
gcccagcgac cgtgtgcagc tgacggccgc cgcggagctg 600 ctgcaggagt tcggctggaa
ctgggtggcc gccctgggca gcgacgacga gtacggccgg 660 cagggcctga gcatcttctc
ggccctggcc gcggcacgcg gcatctgcat cgcgcacgag 720 ggcctggtgc cgctgccccg
tgccgatgac tcgcggctgg ggaaggtgca ggacgtcctg 780 caccaggtga accagagcag
cgtgcaggtg gtgctgctgt tcgcctccgt gcacgccgcc 840 cacgccctct tcaactacag
catcagcagc aggctctcgc ccaaggtgtg ggtggccagc 900 gaggcctggc tgacctctga
cctggtcatg gggctgcccg gcatggccca gatgggcacg 960 gtgcttggct tcctccagag
gggtgcccag ctgcacgagt tcccccagta cgtgaagacg 1020 cacctggccc tggccaccga
cccggccttc tgctctgccc tgggcgagag ggagcagggt 1080 ctggaggagg acgtggtggg
ccagcgctgc ccgcagtgtg actgcatcac gctgcagaac 1140 gtgagcgcag ggctaaatca
ccaccagacg ttctctgtct acgcagctgt gtatagcgtg 1200 gcccaggccc tgcacaacac
tcttcagtgc aacgcctcag gctgccccgc gcaggacccc 1260 gtgaagccct ggcagctcct
ggagaacatg tacaacctga ccttccacgt gggcgggctg 1320 ccgctgcggt tcgacagcag
cggaaacgtg gacatggagt acgacctgaa gctgtgggtg 1380 tggcagggct cagtgcccag
gctccacgac gtgggcaggt tcaacggcag cctcaggaca 1440 gagcgcctga agatccgctg
gcacacgtct gacaaccaga agcccgtgtc ccggtgctcg 1500 cggcagtgcc aggagggcca
ggtgcgccgg gtcaaggggt tccactcctg ctgctacgac 1560 tgtgtggact gcgaggcggg
cagctaccgg caaaacccag acgacatcgc ctgcaccttt 1620 tgtggccagg atgagtggtc
cccggagcga agcacacgct gcttccgccg caggtctcgg 1680 ttcctggcat ggggcgagcc
ggctgtgctg ctgctgctcc tgctgctgag cctggcgctg 1740 ggccttgtgc tggctgcttt
ggggctgttc gttcaccatc gggacagccc actggttcag 1800 gcctcggggg ggcccctggc
ctgctttggc ctggtgtgcc tgggcctggt ctgcctcagc 1860 gtcctcctgt tccctggcca
gcccagccct gcccgatgcc tggcccagca gcccttgtcc 1920 cacctcccgc tcacgggctg
cctgagcaca ctcttcctgc aggcggccga gatcttcgtg 1980 gagtcagaac tgcctctgag
ctgggcagac cggctgagtg gctgcctgcg ggggccctgg 2040 gcctggctgg tggtgctgct
ggccatgctg gtggaggtcg cactgtgcac ctggtacctg 2100 gtggccttcc cgccggaggt
ggtgacggac tggcacatgc tgcccacgga ggcgctggtg 2160 cactgccgca cacgctcctg
ggtcagcttc ggcctagcgc acgccaccaa tgccacgctg 2220 gcctttctct gcttcctggg
cactttcctg gtgcggagcc agccgggccg ctacaaccgt 2280 gcccgtggcc tcacctttgc
catgctggcc tacttcatca cctgggtctc ctttgtgccc 2340 ctcctggcca atgtgcaggt
ggtcctcagg cccgccgtgc agatgggcgc cctcctgctc 2400 tgtgtcctgg gcatcctggc
tgccttccac ctgcccaggt gttacctgct catgcggcag 2460 ccagggctca acacccccga
gttcttcctg ggagggggcc ctggggatgc ccaaggccag 2520 aatgacggga acacaggaaa
tcaggggaaa catgagtga 2559 15 852 PRT Homo
sapiens 15 Met Leu Gly Pro Ala Val Leu Gly Leu Ser Leu Trp Ala Leu Leu
His 1 5 10 15 Pro Gly
Thr Gly Ala Pro Leu Cys Leu Ser Gln Gln Leu Arg Met Lys 20
25 30 Gly Asp Tyr Val Leu Gly Gly Leu Phe
Pro Leu Gly Glu Ala Glu Glu 35 40
45 Ala Gly Leu Arg Ser Arg Thr Arg Pro Ser Ser Pro Val Cys Thr Arg
50 55 60 Phe Ser Ser Asn Gly Leu Leu
Trp Ala Leu Ala Met Lys Met Ala Val 65 70
75 80 Glu Glu Ile Asn Asn Lys Ser Asp Leu Leu Pro Gly
Leu Arg Leu Gly 85 90
95 Tyr Asp Leu Phe Asp Thr Cys Ser Glu Pro Val Val Ala Met Lys Pro
100 105 110 Ser Leu Met Phe Leu Ala
Lys Ala Gly Ser Arg Asp Ile Ala Ala Tyr 115 120
125 Cys Asn Tyr Thr Gln Tyr Gln Pro Arg Val Leu Ala Val Ile
Gly Pro 130 135 140 His Ser Ser Glu
Leu Ala Met Val Thr Gly Lys Phe Phe Ser Phe Phe 145 150
155 160 Leu Met Pro Gln Val Ser Tyr Gly Ala
Ser Met Glu Leu Leu Ser Ala 165 170
175 Arg Glu Thr Phe Pro Ser Phe Phe Arg Thr Val Pro Ser Asp Arg
Val 180 185 190 Gln Leu Thr
Ala Ala Ala Glu Leu Leu Gln Glu Phe Gly Trp Asn Trp 195
200 205 Val Ala Ala Leu Gly Ser Asp Asp Glu Tyr Gly
Arg Gln Gly Leu Ser 210 215 220 Ile
Phe Ser Ala Leu Ala Ala Ala Arg Gly Ile Cys Ile Ala His Glu 225
230 235 240 Gly Leu Val Pro Leu Pro
Arg Ala Asp Asp Ser Arg Leu Gly Lys Val 245
250 255 Gln Asp Val Leu His Gln Val Asn Gln Ser Ser Val
Gln Val Val Leu 260 265 270
Leu Phe Ala Ser Val His Ala Ala His Ala Leu Phe Asn Tyr Ser Ile
275 280 285 Ser Ser Arg Leu Ser Pro Lys
Val Trp Val Ala Ser Glu Ala Trp Leu 290 295
300 Thr Ser Asp Leu Val Met Gly Leu Pro Gly Met Ala Gln Met Gly Thr
305 310 315 320 Val Leu
Gly Phe Leu Gln Arg Gly Ala Gln Leu His Glu Phe Pro Gln
325 330 335 Tyr Val Lys Thr His Leu Ala
Leu Ala Thr Asp Pro Ala Phe Cys Ser 340 345
350 Ala Leu Gly Glu Arg Glu Gln Gly Leu Glu Glu Asp Val Val
Gly Gln 355 360 365 Arg Cys Pro
Gln Cys Asp Cys Ile Thr Leu Gln Asn Val Ser Ala Gly 370
375 380 Leu Asn His His Gln Thr Phe Ser Val Tyr Ala Ala
Val Tyr Ser Val 385 390 395
400 Ala Gln Ala Leu His Asn Thr Leu Gln Cys Asn Ala Ser Gly Cys Pro
405 410 415 Ala Gln Asp Pro
Val Lys Pro Trp Gln Leu Leu Glu Asn Met Tyr Asn 420
425 430 Leu Thr Phe His Val Gly Gly Leu Pro Leu Arg
Phe Asp Ser Ser Gly 435 440 445
Asn Val Asp Met Glu Tyr Asp Leu Lys Leu Trp Val Trp Gln Gly Ser 450
455 460 Val Pro Arg Leu His Asp Val Gly Arg
Phe Asn Gly Ser Leu Arg Thr 465 470 475
480 Glu Arg Leu Lys Ile Arg Trp His Thr Ser Asp Asn Gln Lys
Pro Val 485 490 495 Ser
Arg Cys Ser Arg Gln Cys Gln Glu Gly Gln Val Arg Arg Val Lys
500 505 510 Gly Phe His Ser Cys Cys Tyr
Asp Cys Val Asp Cys Glu Ala Gly Ser 515 520
525 Tyr Arg Gln Asn Pro Asp Asp Ile Ala Cys Thr Phe Cys Gly Gln
Asp 530 535 540 Glu Trp Ser Pro Glu
Arg Ser Thr Arg Cys Phe Arg Arg Arg Ser Arg 545 550
555 560 Phe Leu Ala Trp Gly Glu Pro Ala Val Leu
Leu Leu Leu Leu Leu Leu 565 570
575 Ser Leu Ala Leu Gly Leu Val Leu Ala Ala Leu Gly Leu Phe Val His
580 585 590 His Arg Asp Ser
Pro Leu Val Gln Ala Ser Gly Gly Pro Leu Ala Cys 595
600 605 Phe Gly Leu Val Cys Leu Gly Leu Val Cys Leu Ser
Val Leu Leu Phe 610 615 620 Pro Gly
Gln Pro Ser Pro Ala Arg Cys Leu Ala Gln Gln Pro Leu Ser 625
630 635 640 His Leu Pro Leu Thr Gly Cys
Leu Ser Thr Leu Phe Leu Gln Ala Ala 645
650 655 Glu Ile Phe Val Glu Ser Glu Leu Pro Leu Ser Trp
Ala Asp Arg Leu 660 665 670
Ser Gly Cys Leu Arg Gly Pro Trp Ala Trp Leu Val Val Leu Leu Ala
675 680 685 Met Leu Val Glu Val Ala Leu
Cys Thr Trp Tyr Leu Val Ala Phe Pro 690 695
700 Pro Glu Val Val Thr Asp Trp His Met Leu Pro Thr Glu Ala Leu Val
705 710 715 720 His Cys
Arg Thr Arg Ser Trp Val Ser Phe Gly Leu Ala His Ala Thr
725 730 735 Asn Ala Thr Leu Ala Phe Leu
Cys Phe Leu Gly Thr Phe Leu Val Arg 740 745
750 Ser Gln Pro Gly Arg Tyr Asn Arg Ala Arg Gly Leu Thr Phe
Ala Met 755 760 765 Leu Ala Tyr
Phe Ile Thr Trp Val Ser Phe Val Pro Leu Leu Ala Asn 770
775 780 Val Gln Val Val Leu Arg Pro Ala Val Gln Met Gly
Ala Leu Leu Leu 785 790 795
800 Cys Val Leu Gly Ile Leu Ala Ala Phe His Leu Pro Arg Cys Tyr Leu
805 810 815 Leu Met Arg Gln
Pro Gly Leu Asn Thr Pro Glu Phe Phe Leu Gly Gly 820
825 830 Gly Pro Gly Asp Ala Gln Gly Gln Asn Asp Gly
Asn Thr Gly Asn Gln 835 840 845
Gly Lys His Glu 850 16 2577 DNA Rattus sp. 16 atgccgggtt tggctatctt
gggcctcagt ctggctgctt tcctggagct tgggatgggg 60 tcctctttgt gtctgtcaca
gcaattcaag gcacaagggg actatatatt gggtggacta 120 tttcccctgg gcacaactga
ggaggccact ctcaaccaga gaacacagcc caacggcatc 180 ctatgtacca ggttctcgcc
ccttggtttg ttcctggcca tggctatgaa gatggctgta 240 gaggagatca acaatggatc
tgccttgctc cctgggctgc gactgggcta tgacctgttt 300 gacacatgct cagagccagt
ggtcaccatg aagcccagcc tcatgttcat ggccaaggtg 360 ggaagtcaaa gcattgctgc
ctactgcaac tacacacagt accaaccccg tgtgctggct 420 gtcattggtc cccactcatc
agagcttgcc ctcattacag gcaagttctt cagcttcttc 480 ctcatgccac aggtcagcta
tagtgccagc atggatcggc taagtgaccg ggaaacattt 540 ccatccttct tccgcacagt
gcccagtgac cgggtgcagc tgcaggccgt tgtgacactg 600 ttgcagaatt tcagctggaa
ctgggtggct gccttaggta gtgatgatga ctatggccgg 660 gaaggtctga gcatcttttc
tggtctggcc aactcacgag gtatctgcat tgcacacgag 720 ggcctggtgc cacaacatga
cactagtggc caacaattgg gcaaggtggt ggatgtgcta 780 cgccaagtga accaaagcaa
agtacaggtg gtggtgctgt ttgcatctgc ccgtgctgtc 840 tactcccttt ttagctacag
catccttcat gacctctcac ccaaggtatg ggtggccagt 900 gagtcctggc tgacctctga
cctggtcatg acacttccca atattgcccg tgtgggcact 960 gttcttgggt ttctgcagcg
cggtgcccta ctgcctgaat tttcccatta tgtggagact 1020 cgccttgccc tagctgctga
cccaacattc tgtgcctccc tgaaagctga gttggatctg 1080 gaggagcgcg tgatggggcc
acgctgttca caatgtgact acatcatgct acagaacctg 1140 tcatctgggc tgatgcagaa
cctatcagct gggcagttgc accaccaaat atttgcaacc 1200 tatgcagctg tgtacagtgt
ggctcaggcc cttcacaaca ccctgcagtg caatgtctca 1260 cattgccaca catcagagcc
tgttcaaccc tggcagctcc tggagaacat gtacaatatg 1320 agtttccgtg ctcgagactt
gacactgcag tttgatgcca aagggagtgt agacatggaa 1380 tatgacctga agatgtgggt
gtggcagagc cctacacctg tactacatac tgtaggcacc 1440 ttcaacggca cccttcagct
gcagcactcg aaaatgtatt ggccaggcaa ccaggtgcca 1500 gtctcccagt gctcccggca
gtgcaaagat ggccaggtgc gcagagtaaa gggctttcat 1560 tcctgctgct atgactgtgt
ggactgcaag gcagggagct accggaagca tccagatgac 1620 ttcacctgta ctccatgtgg
caaggatcag tggtccccag aaaaaagcac aacctgctta 1680 cctcgcaggc ccaagtttct
ggcttggggg gagccagctg tgctgtcact tctcctgctg 1740 ctttgcctgg tgctgggcct
gacactggct gccctggggc tctttgtcca ctactgggac 1800 agccctcttg ttcaggcctc
aggtgggtca ctgttctgct ttggcctgat ctgcctaggc 1860 ctcttctgcc tcagtgtcct
tctgttccca ggacgaccac gctctgccag ctgccttgcc 1920 caacaaccaa tggctcacct
ccctctcaca ggctgcctga gcacactctt cctgcaagca 1980 gccgagatct ttgtggagtc
tgagctgcca ctgagttggg caaactggct ctgcagctac 2040 cttcggggcc cctgggcttg
gctggtggta ctgctggcca ctcttgtgga ggctgcacta 2100 tgtgcctggt acttgatggc
tttccctcca gaggtggtga cagattggca ggtgctgccc 2160 acggaggtac tggaacactg
ccgcatgcgt tcctgggtca gcctgggctt ggtgcacatc 2220 accaatgcag tgttagcttt
cctctgcttt ctgggcactt tcctggtaca gagccagcct 2280 ggtcgctata accgtgcccg
tggcctcacc ttcgccatgc tagcttattt catcatctgg 2340 gtctcttttg tgcccctcct
ggctaatgtg caggtggcct accagccagc tgtgcagatg 2400 ggtgctatct tattctgtgc
cctgggcatc ctggccacct tccacctgcc caaatgctat 2460 gtacttctgt ggctgccaga
gctcaacacc caggagttct tcctgggaag gagccccaag 2520 gaagcatcag atgggaatag
tggtagtagt gaggcaactc ggggacacag tgaatga 2577 17 858 PRT Rattus sp.
17 Met Pro Gly Leu Ala Ile Leu Gly Leu Ser Leu Ala Ala Phe Leu Glu 1
5 10 15 Leu Gly Met Gly Ser
Ser Leu Cys Leu Ser Gln Gln Phe Lys Ala Gln 20
25 30 Gly Asp Tyr Ile Leu Gly Gly Leu Phe Pro Leu Gly
Thr Thr Glu Glu 35 40 45 Ala
Thr Leu Asn Gln Arg Thr Gln Pro Asn Gly Ile Leu Cys Thr Arg 50
55 60 Phe Ser Pro Leu Gly Leu Phe Leu Ala Met
Ala Met Lys Met Ala Val 65 70 75
80 Glu Glu Ile Asn Asn Gly Ser Ala Leu Leu Pro Gly Leu Arg Leu
Gly 85 90 95 Tyr Asp
Leu Phe Asp Thr Cys Ser Glu Pro Val Val Thr Met Lys Pro 100
105 110 Ser Leu Met Phe Met Ala Lys Val Gly
Ser Gln Ser Ile Ala Ala Tyr 115 120
125 Cys Asn Tyr Thr Gln Tyr Gln Pro Arg Val Leu Ala Val Ile Gly Pro
130 135 140 His Ser Ser Glu Leu Ala Leu
Ile Thr Gly Lys Phe Phe Ser Phe Phe 145 150
155 160 Leu Met Pro Gln Val Ser Tyr Ser Ala Ser Met Asp
Arg Leu Ser Asp 165 170
175 Arg Glu Thr Phe Pro Ser Phe Phe Arg Thr Val Pro Ser Asp Arg Val
180 185 190 Gln Leu Gln Ala Val Val
Thr Leu Leu Gln Asn Phe Ser Trp Asn Trp 195 200
205 Val Ala Ala Leu Gly Ser Asp Asp Asp Tyr Gly Arg Glu Gly
Leu Ser 210 215 220 Ile Phe Ser Gly
Leu Ala Asn Ser Arg Gly Ile Cys Ile Ala His Glu 225 230
235 240 Gly Leu Val Pro Gln His Asp Thr Ser
Gly Gln Gln Leu Gly Lys Val 245 250
255 Val Asp Val Leu Arg Gln Val Asn Gln Ser Lys Val Gln Val Val
Val 260 265 270 Leu Phe Ala
Ser Ala Arg Ala Val Tyr Ser Leu Phe Ser Tyr Ser Ile 275
280 285 Leu His Asp Leu Ser Pro Lys Val Trp Val Ala
Ser Glu Ser Trp Leu 290 295 300 Thr
Ser Asp Leu Val Met Thr Leu Pro Asn Ile Ala Arg Val Gly Thr 305
310 315 320 Val Leu Gly Phe Leu Gln
Arg Gly Ala Leu Leu Pro Glu Phe Ser His 325
330 335 Tyr Val Glu Thr Arg Leu Ala Leu Ala Ala Asp Pro
Thr Phe Cys Ala 340 345 350
Ser Leu Lys Ala Glu Leu Asp Leu Glu Glu Arg Val Met Gly Pro Arg
355 360 365 Cys Ser Gln Cys Asp Tyr Ile
Met Leu Gln Asn Leu Ser Ser Gly Leu 370 375
380 Met Gln Asn Leu Ser Ala Gly Gln Leu His His Gln Ile Phe Ala Thr
385 390 395 400 Tyr Ala
Ala Val Tyr Ser Val Ala Gln Ala Leu His Asn Thr Leu Gln
405 410 415 Cys Asn Val Ser His Cys His
Thr Ser Glu Pro Val Gln Pro Trp Gln 420 425
430 Leu Leu Glu Asn Met Tyr Asn Met Ser Phe Arg Ala Arg Asp
Leu Thr 435 440 445 Leu Gln Phe
Asp Ala Lys Gly Ser Val Asp Met Glu Tyr Asp Leu Lys 450
455 460 Met Trp Val Trp Gln Ser Pro Thr Pro Val Leu His
Thr Val Gly Thr 465 470 475
480 Phe Asn Gly Thr Leu Gln Leu Gln His Ser Lys Met Tyr Trp Pro Gly
485 490 495 Asn Gln Val Pro
Val Ser Gln Cys Ser Arg Gln Cys Lys Asp Gly Gln 500
505 510 Val Arg Arg Val Lys Gly Phe His Ser Cys Cys
Tyr Asp Cys Val Asp 515 520 525
Cys Lys Ala Gly Ser Tyr Arg Lys His Pro Asp Asp Phe Thr Cys Thr 530
535 540 Pro Cys Gly Lys Asp Gln Trp Ser Pro
Glu Lys Ser Thr Thr Cys Leu 545 550 555
560 Pro Arg Arg Pro Lys Phe Leu Ala Trp Gly Glu Pro Ala Val
Leu Ser 565 570 575 Leu
Leu Leu Leu Leu Cys Leu Val Leu Gly Leu Thr Leu Ala Ala Leu
580 585 590 Gly Leu Phe Val His Tyr Trp
Asp Ser Pro Leu Val Gln Ala Ser Gly 595 600
605 Gly Ser Leu Phe Cys Phe Gly Leu Ile Cys Leu Gly Leu Phe Cys
Leu 610 615 620 Ser Val Leu Leu Phe
Pro Gly Arg Pro Arg Ser Ala Ser Cys Leu Ala 625 630
635 640 Gln Gln Pro Met Ala His Leu Pro Leu Thr
Gly Cys Leu Ser Thr Leu 645 650
655 Phe Leu Gln Ala Ala Glu Ile Phe Val Glu Ser Glu Leu Pro Leu Ser
660 665 670 Trp Ala Asn Trp
Leu Cys Ser Tyr Leu Arg Gly Pro Trp Ala Trp Leu 675
680 685 Val Val Leu Leu Ala Thr Leu Val Glu Ala Ala Leu
Cys Ala Trp Tyr 690 695 700 Leu Met
Ala Phe Pro Pro Glu Val Val Thr Asp Trp Gln Val Leu Pro 705
710 715 720 Thr Glu Val Leu Glu His Cys
Arg Met Arg Ser Trp Val Ser Leu Gly 725
730 735 Leu Val His Ile Thr Asn Ala Val Leu Ala Phe Leu
Cys Phe Leu Gly 740 745 750
Thr Phe Leu Val Gln Ser Gln Pro Gly Arg Tyr Asn Arg Ala Arg Gly
755 760 765 Leu Thr Phe Ala Met Leu Ala
Tyr Phe Ile Ile Trp Val Ser Phe Val 770 775
780 Pro Leu Leu Ala Asn Val Gln Val Ala Tyr Gln Pro Ala Val Gln Met
785 790 795 800 Gly Ala
Ile Leu Phe Cys Ala Leu Gly Ile Leu Ala Thr Phe His Leu
805 810 815 Pro Lys Cys Tyr Val Leu Leu
Trp Leu Pro Glu Leu Asn Thr Gln Glu 820 825
830 Phe Phe Leu Gly Arg Ser Pro Lys Glu Ala Ser Asp Gly Asn
Ser Gly 835 840 845 Ser Ser Glu
Ala Thr Arg Gly His Ser Glu 850 855
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