Patent application title: Compounds and Methods Useful for Detection and Treatment of Cancer
Inventors:
IPC8 Class: AG01N33574FI
USPC Class:
1 1
Class name:
Publication date: 2022-03-24
Patent application number: 20220091122
Abstract:
The present invention relates to compounds and methods useful for the
detection and treatment of disorders associated with frameshift mutations
in coding microsatellite regions. The compounds and methods are
applicable in cancers, especially of DNA mismatch repair deficient (MMR)
sporadic tumors and HNPCC associated tumors. The compounds are useful for
detection of disorders and in therapy such as immuno-therapy. The
diagnostic methods relate to diagnosis and prognostic assessment of
disorders associated with frameshift polypeptides originating from
frameshift mutations in coding microsatellite regions of genes based on
the detection of immunological entities directed against said frameshift
polypeptides in body fluids. With respect to the treatment of cancer, the
invention pertains to methods which use immuno therapy with combinatorial
mixtures of tumor specific frameshift peptides to elicit a cytotoxic
T-cell response specifically directed against tumor cells for prevention
and curative treatment of cancers and pre-cancers.Claims:
1. A method comprising measuring the presence or absence or level of
antibodies or antigen-recognizing cells directed against a frameshift
polypeptide in a biological sample from a cancer patient selected from
the group consisting of a lung cancer patient, liver cancer patient,
renal cancer patient, melanoma patient, cancer of the brain patient, head
and neck cancer patient, leukemia patient, lymphoma patient, prostate
cancer patient, breast cancer patient, ovary cancer patient, endometrial
cancer patient, lung cancer patient, and bladder cancer patient, wherein
the frameshift polypeptide is derived from a frameshift mutation in the
A11 repeats in a coding microsatellite region of a gene selected from the
group consisting of TAF1B, MACS, and HT001.
2. The method of claim 1, wherein the frameshift polypeptide is derived from the A11 repeat of the TAF1B gene.
3. The method of claim 1, wherein the frameshift polypeptide is derived from the A11 repeat of the HT001 gene.
4. The method of claim 1 wherein the frameshift polypeptide is derived from the A11 repeat of the MACS gene.
5. The method of claim 1, which measures the presence or absence and/or level of the antibodies.
6. The method of claim 1, which measures the presence or absence and/or level of the antigen-recognizing cells.
7. The method of claim 1, wherein colorectal cancer patient is a patient in which the presence or absence and/or level of antibodies or antigen-recognizing cells against the one or more frameshift polypeptides has not previously been detected.
8. The method of claim 1, wherein the presence or absence and/or level of a plurality of antibodies or antigen-recognizing cells is measured, each of the plurality directed against one of a set of frameshift polypeptides, the set of frameshift polypeptides comprising at least one of the frameshift polypeptides derived from the frameshift mutation in the A11 repeats in the coding microsatellite region of the gene selected from the group consisting of TAF1B, MACS, and HT001.
9. The method of claim 8, wherein the set of frameshift polypeptides further comprises one or more frameshift polypeptides derived from a frameshift mutation in the A11 repeats in a coding microsatellite region of a gene selected from the group consisting of UVRAG, ELAVL3, TCF6L1, ABCF1, AIM2, and CH D2.
10. The method of claim 8, wherein the set of frameshift polypeptides comprises at least 3 frameshift polypeptides.
11. The method of claim 8, wherein the set of frameshift polypeptides comprises at least 4 frameshift polypeptides.
12. The method of claim 8, wherein the set of frameshift polypeptides comprises at least 5 frameshift polypeptides.
13. The method of claim 8, wherein the set of frameshift polypeptides comprises up to 30 frameshift polypeptides.
14. The method of claim 8, wherein the set of frameshift polypeptides is selected from the group consisting of: Set 1, consisting of HT001, U79260, and MACS; Set 2, consisting of HT001, TAF 1B, and MACS; Set 3, consisting of HT001, TGFB2R, and MACS; Set 4, consisting of HT001, U79260, and TGFB2R; Set 5, consisting of HT001, U79260, and TAF1B; Set 6, consisting of HT001, TGFB2R, and TAF1B; Set 7, consisting of HT001, U79260, TGFB2R, and MACS; Set 8, consisting of HT001, U79260, TGFB2R, and AC1; Set 9, consisting of HT001, U79260, TGFB2R, and TAF1B; Set 10, consisting of HT001, TGFB2R, MACS, and CASP5; Set 11, consisting of HT001, U79260, MACS, and CASP5; Set 12, consisting of HT001, U79260; MACS, and AC1; Set 13, consisting of HT001, TGFB2R, TAF1B, and CASP5; Set 14, consisting of HT001, U79260, MACS, and OGT; Set 16, consisting of HT001, U79260, TGFB2R, MACS, and AC1; Set 17, consisting of HT001, U79260, TGFB2R, TAF1B, and MACS; Set 18, consisting of HT001, U79260, TGFB2R, TAF1B, and AC1; Set 19, consisting of HT001, U79260, TGFB2R, MACS, and AIM2; Set 20, consisting of HT001, U79260, TGFB2R, TAF1B, and AIM2; Set 21, consisting of U79260, TGFB2R, TAF1B, AC1, and CASP5; a set consisting of HT001, U79260, TGFB2R, AC1, and CASP5; Set 22, consisting of U79260, TGFB2R, MACS, AC1, and CASP5; Set 23, consisting of HT001, U79260, TAF1B, MACS, and AC1; Set 24, consisting of HT001, U79260, TAF1B, MACS, and CASP5; a set consisting of HT001, U79260, MACS, AC1, and OGT; Set 25, consisting of HT00, U79260, MACS, MSH3, and OGT; Set 26, consisting of HT001, U79260, TGFB2R, MACS, and OGT; Set 27, consisting of HT001, TGFB2R, TAF1B, AC1, and CASP5; and Set 28, consisting of HT001, U79260, TGFB2R, AC1, and AIM2.
Description:
[0001] This is a continuation of U.S. Ser. No. 16/120,981, filed Sep. 4,
2018; which is a continuation of U.S. Ser. No. 14/340,467, filed Jul. 24,
2014; which is a continuation of U.S. application Ser. No. 13/284,660,
filed Oct. 28, 2011, now abandoned; which is a divisional of U.S. patent
application Ser. No. 10/511,698, filed Jun. 2, 2005, U.S. Pat. No.
8,053,552; which is a National Stage of International Application
PCT/EP03/04083, filed Apr. 17, 2003, published Oct. 23, 2003, under PCT
Article 21(2) in English; which claims the priority of EP 02008773.0,
filed Apr. 18, 2002, EP 02008771.4, filed Apr. 18, 2002, and EP
02008774.8, filed Apr. 18, 2002. The contents of the above-identified
applications are incorporated herein by reference in their entirety.
FIELD OF THE INVENTION
[0002] The present invention relates to compounds and methods useful for the detection and treatment of disorders associated with frameshift mutations in coding microsatellite regions. The compounds and methods are applicable in cancers, especially of DNA mismatch repair deficient (MMR) sporadic tumors and HNPCC associated tumors. The compounds disclosed in the invention are useful for detection of disorders and in therapy such as e.g. immuno-therapy. The diagnostic methods relate to diagnosis and prognostic assessment of disorders associated with frameshift polypeptides originating from frameshift mutations in coding microsatellite regions of genes based on the detection of immunological entities directed against said frameshift polypeptides in body fluids. With respect to the treatment of cancer, especially of DNA mismatch repair deficient (MMR) sporadic tumors and HNPCC associated tumors, the invention pertains to methods which use immuno therapy with combinatorial mixtures of tumor specific frameshift peptides to elicit a cytotoxic T-cell response specifically directed against tumor cells for use in prevention as well as in curative treatment of cancers and pre-cancers.
REFERENCE TO SEQUENCE LISTING, TABLE OR COMPUTER PROGRAM
[0003] The Sequence Listing is concurrently submitted herewith with the specification as an ASCII formatted text file via EFS-Web with a file name of P31038US4_SEQLIST_ST25 with a creation date of May 10, 2021, and a size of 269,736 bytes. The Sequence Listing filed via EFS-Web is part of the specification and is hereby incorporated in its entirety by reference herein.
BACKGROUND OF THE INVENTION
[0004] Tumor cells accumulate mutations in components of cellular pathways, that are essential for the maintenance of normal growth and differentiation. In human epithelial tumors, 2 types of genetic instability have been identified: chromosomal instability (CIN), which marks structural and numerical chromosomal aberration in aneuploid neoplastic cells, and microsatellite instability (MSI), which reflects length variations at repetitive DNA sequences in diploid tumor cells. The type and spectrum of mutated genes markedly differs among CIN and MSI tumors, suggesting distinct but not mutually exclusive pathways of carcinogenesis. MSI occurs in about 90% of hereditary nonpolyposis colorectal cancers (HNPCC) as well as in about 15% of sporadic tumors of the colon and other organs, and is caused by mutational inactivation of different DNA mismatch repair genes.
[0005] The mutations lead especially in the case of frameshift mutations in coding microsatellite regions to the expression of new peptide sequences in the affected cells, that do not occur in wild-type cells. The altered peptides may be used as detection markers for disorders associated with frameshift mutations in coding microsatellite regions such as degenerative disorders or cancers (e.g. gastrointestinal cancers).
[0006] The accumulation of genetic alterations and resulting mutant proteins represent a major obstacle for tumor cells to escape immune surveillance. The mutant proteins or peptides encoded by expressed mutant genes may elicit a specific cellular immune response and thus may be recognized by CTL. This is especially true concerning mutations resulting from chromosomal instabilities, but also pertains to more subtle genetic alterations, such as small deletions and insertions in microsatellites.
[0007] This situation can be used for prevention and therapies in cancers. The cancer cells are characterized by the expression of neo-peptides, which arouse from the genetic alterations. These proteins are not present in normal, non cancerous tissues. Thus, the neo-peptides may be used to distinguish on a molecular level between tumors and normal tissues. As tools suitable for the molecular discrimination antigen specific molecules or cells may be used. Thus it is possible to elicit an immune response against frameshift peptides, as might arise from MSI mutations, specific for tumors. Using cytotoxic T lymphocytes or FS8-specific antibodies it is thus possible to specifically attack and eliminate tumor cells in organisms and tissues.
[0008] A large number of genes containing coding microsatellites have been identified. Various of these genes show mutations within the microsatellites with certain frequencies in sporadic tumors. For few of these genes it could be shown, that they are involved in the majority of cases of particular tumors. For example the (A).sub.10 tract within the TGWU gene and the (G).sub.8 tract within the BAX gene are commonly mutated in gastrointestinal cancers such as colon cancer or gastric cancer.
[0009] The T-cell mediated immune response on the other hand provides a strong and specific selection pressure for the rapidly growing tumor cells. (Tomlinson I, et al., Nat. Med. 1999; 5: 11-2) Thus tumor evolution is forced to circumvent the immune surveillance by the cellular immune response. As a consequence of this selection pressure, mutations in genes of the antigen processing or presenting machinery arise in MMR-deficient tumor cells. In fact evasion of the immune surveillance by acquiring .beta.2-microglobulin mutations has been observed at high frequency in MSI.sup.+ tumor cells (Bicknell D C, et al., Curr. Biol 1996; 6: 1695-7). Other targets of specific mutation or down-regulation of expression are TAP1/TAP2 or HLA alleles. Direct down-regulation of expression of immunogenic epitopes is also a possible mechanism of immune escape as has been shown for melanoma-associated antigens in vivo (Jager E, et al., Int. J. Cancer 1997; 71: 142-7). Due to this fact the relevant epitopes may not be detectable by the immune system.
[0010] As a consequence the promising therapies based on immune response directed against frameshift peptides in tumor tissues may fail in a not yet determined number of cases of tumors. So the approaches for the use of the vaccination therapy of cancer mediated by frameshift peptides might be limited by the fact, that the potential immunogenic frameshift peptides are not always detectable by the immune system due to mutations in the antigen presenting and processing properties of the cancer cells.
[0011] Even supposed, that during specific stages of tumor development cells express the aberrant proteins and thus are vulnerable to the immune surveillance, there potentially remains a population of tumor cells, that is not eliminated by the therapy. This state is quite undesirable for any therapy of cancers, for the remaining cells may continue growing and thus the tumor is not eliminated from the organism.
[0012] Similarly methods for detection of molecular markers suitable for diagnosis of disorders associated with frameshift mutations in coding microsatellite regions and for assessment of prognosis for said disorders are prone to overlook especially markers originating from small populations of affected cells as they may occur particularly in early stages of the disorder. This may in part be overcome by an elevated effort in the preparation of testing samples to raise the probability of the detection of disorders. However especially concerning disorders located in body regions, that are merely inaccessible, or accessible only under circumstances, that are quite consuming or discomfortable to patients alternative methods for reliable detection of molecular markers associated with disorders are desirable.
[0013] It is known in the art, that the mutant proteins or peptides derived from aberrantly expressed proteins may elicit a specific cellular immune response and thus may be recognized by cytotoxic T lymphocytes (CTL). This is especially true concerning mutations resulting from chromosomal instabilities, but pertains also to the more subtle genetic alterations, such as small deletions and insertions in microsatellites.
[0014] The T-cell mediated immune response on the other hand provides a strong and specific selection pressure for the rapidly growing tumor cells (Tomlinson I, et al., Nat. Med. 1999; 5: 11-2). Thus tumor evolution is forced to circumvent the immune surveillance by the cellular immune response. As a consequence of this selection pressure, mutations in genes of the antigen processing or presenting machinery arise in DNA mismatch repair (MMR)-deficient tumor cells. In fact evasion of the immune surveillance by acquiring .beta.2-microglobulin mutations has been observed at high frequency in MSI.sup.+ tumor cells (Bicknell D C, et al., Curr. Biol 1996; 6: 1695-7). Other targets of specific mutation or down-regulation of expression are TAP1/TAP2 or HLA alleles. Direct down-regulation of expression of immunogenic epitopes is also a possible mechanism of immune escape as has been shown for melanoma-associated antigens in vivo (Jager E, et al., Int. J. Cancer 1997; 71: 142-7). Due to this fact the relevant epitopes may not be detectable by the immune system. Thus it was suspected, that components of the immune system directed against novel peptides, characteristic for e.g. tumor cells, are not suitable for the detection of the disorders especially in the case of frameshift mutation peptides. This is due to the fact, that MSI disorders are frequently associated with DNA mismatch repair deficiency and thus are especially prone to mutations. This makes the affected cells especially apt to escape mutations in response to the attack by the immune system.
BRIEF DESCRIPTION OF THE DRAWINGS
[0015] FIG. 1:
[0016] ELISpot-analysis of FSP T-cell lines. Titrated amounts of T-cells were incubated overnight with 3.5.times.10.sup.4 peptide loaded T2 cells per well. The number of IFN-.gamma.-releasing activated T-cells (spots) among the total number of cells analyzed (10.sup.6) is depicted for each frameshift peptide. Reactivity against peptide YLLPAIVHI from the nuclear protein P68 served as a negative control and is indicated (open bars).
[0017] FIGS. 2-1 to 2-8:
[0018] Listing of sequences of polypeptides encoded by genes with coding microsatellites; the sequences of polypeptides arising from different possible frameshift mutations are depicted. For each polypeptide the sequence expressed from the wild type open reading frames is given (wtORF); Furthermore the sequences expressed from (-1) mutations and from (-2/+1) mutation are given.
[0019] FIG. 3: Frameshift peptide specific and HLA-A2-restricted lysis of target cells. (FSP02); The antigen specificity of the FSP02 CTL line was tested in the presence of unlabeled cold targets, T2 cells pulsed with FSP02 (open squares) at an inhibitor:target ratio of 50:1. Lysis without cold targets is shown as a control (closed squares). All data are shown as the mean and standard deviation from 3 replicate wells. For experimental details see example 6.
[0020] FIG. 4: Frameshift peptide specific and HLA-A2-restricted lysis of target cells. (FSP06); The antigen specificity of the FSP06 CTL line was tested in the presence of unlabeled cold targets, T2 cells pulsed either with FSP06 (open squares) at an inhibitor:target ratio of 50:1. Lysis without cold targets is shown as a control (closed squares). All data are shown as the mean and standard deviation from 3 replicate wells. For experimental details see example 6.
DETAILED DESCRIPTION OF THE INVENTION
[0021] The inventors have now surprisingly found, that specific antibodies or antigen recognizing cells directed against a particular new frameshift peptide are in detectable levels present within the body fluids of individuals harbouring MSI associated disorders. This is especially due to the fact, that during specific stages of tumor development cells express the aberrant proteins. During these stages the peptides may be accessible to the immune surveillance, and thus an immune response may be elicited. Even though cell populations affected by respective disorders such as tumors may be eliminated from the organism, or may be mutated, such, that no further presentation of immunogenic epitopes may occur, there remains an immunological memory of the presence of the respective peptides at a certain time. Such the evolution of a cell population affected by a disorder associated with the expression of new frameshift peptides leaves immunological traces of its existence consisting e.g. of antibodies and specific T-lymphocytes directed against the particular peptides. Hence the presence of specific immune response elements directed against a particular frameshift peptide is indicative of the presence of a population of (tumor) cells, that expresses or has expressed at a certain time the respective peptide.
[0022] To further enhance the fidelity of the detection of the presence or absence of a disorder a set of peptides frequently occurring in disorders such as tumors may be applied in the detection reaction.
[0023] The present invention thus provides a method for the detection of disorders associated with frameshift peptides arising from mutations in coding microsatellite regions based on the detection of specific immunological entities directed against said frameshift peptides present in the body fluids of affected individuals directed against said frameshift peptides. The method is suited for primary detection of disorders such as tumors, for the early detection of disorders or of precursory stages of disorders, and for the assessment of prognosis in said disorders.
[0024] One further aspect of the invention is based on the inventors findings, that a mixture of frameshift peptides chosen according to combinatorial parameters minimizes the escape of particular populations of tumor cells from immunogenic elimination and may be used as a vaccine against a wide variety of DNA mismatch repair deficient tumors. The invention is based on the fact, that the immune escape of tumor cells is directed towards single immunogenic epitopes (frameshift peptides) in a potentially restricted subpopulation of the tumor cells. In the vast majority of MSI+ tumors various mutations may be found within the genome of the affected cells. So a combinatorial vaccination approach including several antigenic peptides could overcome this obstacle.
[0025] It is one aspect of the present invention to provide nucleic acid sequences of the genes TAF1B, MACS, UVRAG, ELAVL3, TCF6L1, ABCF1, AIM2, CHD2 and HT001, that have frameshift mutations within their coding regions.
[0026] A second aspect of the present invention is to provide new frameshift peptides, that occur in a wide range of different MSI.sup.+ tumors.
[0027] A third aspect of the present invention is a method for detection of MSI.sup.+ tumors using said frameshift peptides as molecular markers.
[0028] A fourth aspect of the present invention is a method for treatment of MSI.sup.+ tumors using said frameshift peptides for therapeutic purposes.
[0029] In a fifth aspect the present invention provides sets of frameshift peptides, that occur in a wide range of different MSI.sup.+ tumors and that diminish the probability of escape of tumors to be attacked by the immuno-therapy.
[0030] A sixth aspect of the present invention is a method for vaccination against MSI.sup.+ tumors using said set of frameshift peptides.
[0031] A seventh aspect of the present invention is a method for treatment of MSI.sup.+ tumors using a set of frameshift peptides, that elicit an immune response directed against a wide range of tumors.
[0032] An eighth aspect of the invention relates to the detection of disorders associated with frameshift mutations in coding microsatellite regions comprising the detection of immunological entities directed against frameshift peptides in body fluids of individuals.
[0033] The present invention thus provides compounds and methods for the therapy and detection of disorders associated with frameshift peptides arising from mutations in coding microsatellite regions. The diagnostic and therapeutic methods are suited for application in disorders such as tumors or in precursory stages of disorders.
[0034] Within the context of the present invention disorders associated with frameshift mutations comprises for example degenerative diseases, such as neurodegenerative diseases, vascular disorders, disorders caused by stress, such as oxidative stress, chemically induced stress, irradiation induced stress, etc. and cancers including all sporadic cancers as well as HNPCC associated cancers. Cancers as used herein may comprise e.g. colorectal cancer, small cell lung cancer, liver cancer (primary and secondary), renal cancer, melanoma, cancer of the brain, head and neck cancer, gastrointestinal cancers, leukemias, lymphomas. prostate cancer, breast cancer, ovary cancer, endometrial cancer, lung cancer, bladder cancer etc.
[0035] The method according to the present invention may be applied to any eucaryotic organisms. In one aspect the eucaryotic organisms are those exhibiting an immunologic defense system. The eucaryotic organisms are for example mammalian animals and especially animals of agricultural value such as pigs, cows, sheep, etc., companion animals, such as cats, dogs, horses etc., animals employed in research purposes such as mice, rats, rabbits, hamsters etc. or humans.
[0036] Nucleic acid molecules according to the present invention may comprise polynucleotides or fragments thereof. Preferred polynucleotides may comprise at least 20 consecutive nucleotides, preferably at least 30 consecutive nucleotides and more preferably at least 45 consecutive nucleotides of the sequences. The nucleic acids according to the present invention may also be complementary or reverse complementary to any of said polynucleotides. Polynucleotides may for example include single-stranded (sense or antisense) or double-stranded molecules, and may be DNA (genomic, cDNA or synthetic) or RNA. RNA molecules comprise as well hnRNA (containing introns) as mRNA (not containing introns). According to the present invention the polynucleotides may also be linked to any other molecules, such as support materials or detection marker molecules, and may, but need not, contain additional coding or non-coding sequences.
[0037] Mutation as used in the context of the present invention may comprise insertions or deletions of one or several nucleotides (or nucleotide repeats) within the specified microsatellite sequences. In a preferred embodiment of the present invention the number of nucleotides to be inserted or deleted is not 3 or must not be divisible by 3, such that the mutation leads to a frameshift with respect to the translational reading frame of the downstream nucleic acid sequence. Thus the nucleic acid sequence downstream of the mutation point will render a polypeptide-sequence different from the native sequence encoded by the respective gene. The mutation in these cases leads to a novel peptide sequence (a neo-peptide). Commonly the new peptide sequence is short due to the fact, that novel stop codons arise from the shift in the reading frame.
[0038] Frameshift mutations in microsatellites are usually due to DNA polymerase slippage and may be characterized by the type of the repeat. Thus in mono nucleotides repeats this type of mutation renders 1 nt insertion or deletion. In dinucleotide repeats and tetranucleotide repeats mutations are insertions or deletions of 2 or 4 nt respectively. For example commonly (-1) mutations occur in mononucleotide repeats (MNRs). In these mutations one nucleotide is deleted such that the reading frame is shifted by one nucleotide toward the 5' end of the gene compared to the original reading frame. This type of mutation renders a reading frame identical to that produced by (+2) mutations, which arise from two nucleotide insertions in the respective microsatellites. The respective (-1) or (+2) polypeptides might differ by one amino acid. The other frameshift mutation variant leading to frameshift mutations differing from (-1) mutations concerning the resulting reading frame is the (+1) mutation, arising from one nucleotide insertion, thus rendering a reading frame one nucleotide toward the 3' end of the gene compared to the original reading frame. This mutation type gives a reading frame identical to that of (-2) mutations, wherein the encoded polypeptides differ by one amino acid. (-3) and (+3) mutations are irrelevant according to the present invention, for they do not give rise to frameshift polypeptides.
[0039] Frameshift polypeptides as used herein shall comprise any polypeptides or fragments thereof, that arise by a frameshift mutation within a coding microsatellite sequence of a gene. A gene may harbour one or more coding microsatellite regions, that may give rise to frameshift peptides. The coding microsatellites according to the present invention comprise mononucleotide repeats, dinucleotide repeats, trinucleotide repeats, tetranucleotide repeats and pentanucleotide repeats of any length. According to present invention coding microsatellites contain preferably at least 3 and more preferably at least 5 repeats of the respective nucleotide pattern (1-5 nucleotides, which are repeated).
[0040] The frameshift polypeptides as used according to the present invention comprise at least 1, more preferred at least 2 and even more preferred at least 3 amino acids of the mutated part of the polypeptide. Additionally, the frameshift polypeptides may comprise fragments of the originally non-mutated proteins and/or may be fused to any other polypeptide sequences suitable for the purposes of the present invention. Examples of such polypeptide sequences are linker sequences, or structural peptide sequences, such as beta barrels, loop sequences etc. that facilitate the immunogenicity of the frameshift sequences according to the present invention within the fusion polypeptide.
[0041] In certain embodiments of the invention the frameshift polypeptides suitable for the methods disclosed herein are immunogenic polypeptides. This requires, that the polypeptides may stimulate immune responses in host organisms either in the form the polypeptides adopt in their natural environment and/or especially in the form the polypeptides adopt after processing by the cellular antigen processing and presenting machinery.
[0042] According to the present invention the frameshift polypeptides may also be represented by nucleic acids coding for said polypeptides. These nucleic acids may for example be used for the in situ expression of the respective polypeptides. For the purpose of expression of nucleic acids, the particular nucleic acids may be joined with suitable other nucleic acid sequences, that enable for the cloning and expression of said nucleic acids encoding the frameshift polypeptides.
[0043] In certain embodiments of the present invention frameshift polypeptides may comprise fusion or chimeric polypeptides containing sequences disclosed herein. Fusion proteins comprise the frameshift polypeptide according to the present invention together with any second and further polypeptides, such as e.g. one more frameshift polypeptide of the same sequence or of another sequence. Heterologous polypeptides may comprise enzymes, receptor molecules, antigens, antigenic or immunogenic epitopes or fragments, antibodies or fragments thereof, signalling polypeptides or signal transducing polypeptides, labelled polypeptides etc. In one embodiment of the invention the fusion peptides may be constructed for enhanced detection or purification of the frameshift polypeptides, or of complexes of the frameshift polypeptides with the respective immunological entities according to the present invention. For the purpose of purification tags, such as e.g. his-tags, myc-tags etc. may be added to the polypeptides. For the purpose of detection antigenic portions, enzymes, chromogenic sequences etc. may be fused to the polypeptides. The fusion proteins of the present invention may (but need not) include a linker peptide between the first and second polypeptides.
[0044] A nucleic acid sequence encoding a fusion protein of the present invention is constructed using known recombinant DNA techniques to assemble separate nucleic acid sequences encoding the first and second polypeptides into an appropriate expression vector. The 3' end of a nucleic acid sequence encoding the first polypeptide is ligated, with or without a peptide linker, to the 5' end of a nucleic acid sequence encoding the second polypeptide ensuring the appropriate reading frames of the sequences to permit mRNA translation of the two nucleic acid sequences into a single fusion protein that retains the biological activity (antigenicity) of both the first and the second polypeptides.
[0045] A peptide linker sequence may be employed to separate the first and the second polypeptides by a distance sufficient to ensure, that each polypeptide folds into its secondary and tertiary structures. Such a peptide linker sequence is incorporated into the fusion protein using standard techniques well known in the art. Suitable peptide linker sequences may be chosen based on the following factors: (1) their ability to adopt a flexible extended conformation; (2) their inability to adopt a secondary structure that could interact with functional epitopes on the first and second polypeptides; and (3) the lack of hydrophobic or charged residues that might react with the polypeptide functional epitopes. Preferred peptide linker sequences contain Gly, Asn and Ser residues. Other near neutral amino acids, such as Thr and Ala may also be used in the linker sequence. Amino acid sequences which may be usefully employed as linkers include those disclosed in Maratea et al., Gene 40:39-46, 1985; Murphy et al., Proc. Natl. Acad. Sci. USA 83:8258-8262, 1986; U.S. Pat. Nos. 4,935,233 and 4,751,180. The linker sequence may be from 1 to about 50 amino acids in length. Peptide sequences are not required when the first and second polypeptides have non-essential N-terminal amino acid regions that can be used to separate the functional domains and prevent steric interference.
[0046] In certain embodiments of the present invention, especially for the detection of specific antibodies directed against frameshift polypeptides, the frameshift polypeptides themselves may be employed. Immunogenic portions as used herein is a portion of a protein, that is recognized by a B-cell and/or T-cell surface antigen receptor. The immunogenic portions comprise at least 5 amino acid residues, more preferably at least 10 amino acid residues and most preferably at least 15 amino acid residues of the frameshift polypeptides according to the present invention.
[0047] Immunogenic portions useful for the detection of specific antibodies may be provided as oligopeptides or as part of larger proteins. This is dependent on the embodiment of the invention. Where antibodies are to be detected, the antigenic epitopes may either be primary structures of polypeptides or the epitopes may be built by complex arrangements of tertiary structures of polypeptides. Concerning cells directed against specific frameshift peptides the relevant immunogenic portions are merely short fragments of peptides with a length of about 10-20 amino acids. Thus depending on the particular detection method the immunogenic portions have to be chosen.
[0048] In one embodiment of the invention a set of frameshift polypeptides is used for the detection of antibodies. The set may be a combination of the relevant peptides in solution, in cases, where information about the presence of immunological entities in general is sought. In contrast, when information about the presence or absence of particular frameshift peptides within a set of peptides is sought, the frameshift peptides may for example be tested each as a single, simultaneously in multiple testing reactions. Such experiments may for example be carried out in form of multi-well tests or using peptide arrays etc.
[0049] In order to address a representative choice of mutations potentially characterizing a disorder a set of frameshift polypeptides used according to the method disclosed herein comprises for example 5-20, in a preferred embodiment 10-30, in another preferred embodiment 20-50, in a more preferred embodiment 50-100, in an even more preferred embodiment 100-500 and in the most preferred embodiment more than 500 different frameshift polypeptides originating from frameshift mutations in coding microsatellite regions. The frameshift polypeptides to be used as a set according to the present invention are selected with respect to a number of parameters characterizing said polypeptides. A nucleic acid sequence encoding a fusion protein of the present invention is constructed using known recombinant DNA techniques to assemble separate nucleic acid sequences encoding the first and second polypeptides into an appropriate expression vector. The 3' end of a nucleic acid sequence encoding the first polypeptide is ligated, with or without a peptide linker, to the 5' end of a nucleic acid sequence encoding the second polypeptide ensuring the appropriate reading frames of the sequences to permit mRNA translation of the two nucleic acid sequences into a single fusion protein that retains the biological activity (antigenicity) of both the first and the second polypeptides.
[0050] Generally using an immense or unlimited number of occurring frameshift peptides it would be possible to address any potential number of disorder, that is associated with frameshift mutations. Due to practical and immunological concerns the number of peptides, that are included in a vaccine must be limited. To ensure a broad range of impact for any diagnostic or therapeutic method employing a set of frameshift polypeptides, the selection of particular peptides has to be based on rationale considerations.
[0051] A set of frameshift polypeptides used according to the method disclosed herein comprises at least 3, 4, 5, 6 or even 7 and in certain embodiments 8, 9 or 10 frameshift polypeptides. Due to immunological as well as practical concerns The set of frameshift peptides used as a vaccine may not include an unlimited number of frameshift peptides. Preferably the set of frameshift peptides comprises at maximum 15, in a more preferred embodiment at maximum 20 and in the most preferred embodiment of the invention at maximum 30 frameshift polypeptides. In order to ensure a maximum range of disorders to be addressed by the selected set of frameshift polypeptides the members of the set have to be selected by reasonable considerations. The frameshift polypeptides to be used as a set according to the present invention are selected with respect to a number of parameters characterizing said polypeptides.
[0052] In one embodiment the members of the set are chosen, so that only three different peptides may be used to cover a wide range of tumors for as well therapeutic as well as diagnostic approaches. Using larger panels of frameshift peptides the stringency to the choice of individual peptides is lowered. In especially small sets all parameters influencing the efficacy of addressing a wide range of tumors need to be optimally met.
[0053] In larger panels even peptides occurring with lower frequencies or allowing for efficient immune-escape may be included.
[0054] One crucial aspect influencing the selection of the frameshift peptides is the mutation frequency of the relevant microsatellite region and thus the frequency of a particular expressed frameshift polypeptide. Mutation frequency as used in the context of the present invention pertains to the percentage of samples within a defined range of total samples, which show a particular mutation. Any method suitable for the determination of the percentage of individuals in a range of samples displaying the existence of a particular genotype or phenotype (with respect to the expression of polypeptides) may be employed for the determination of the frequency according to the present invention. The frequencies may be determined e.g. as described below in example 1.
[0055] The frequency may be the frequency of frameshift mutation within a coding microsatellite region or a frequency of expression of a frameshift polypeptide. Furthermore the frequency may be e.g. a frequency over a total of different tumor entities, the frequency with respect to a particular tumor entity, a frequency over several tumors entities restricted to particular stages of tumorigenesis or a frequency with respect to a particular tumor entity restricted to particular stages of tumorigenesis.
[0056] The frequency according to the present invention has to be determined taking into account a range of samples sufficient to render significant data. For example preferably at least 50 to 100 tumors may be included in the range of samples analyzed. In case, that a smaller number of samples has been taken into account for determination of the frequency, a variation of the determined frequency may take place, if the range of samples is broadened.
[0057] Generally any frequency as determined may be used as a tool for the choice of a set of frameshift polypeptides according to the present invention. To ensure best results for the method according to the present invention a largest possible number of samples has to be taken into account. Yet if there are only rare data, a frequency may also be determined with respect to a restricted number of samples. This may especially be true, if the data for the restricted population of samples indicates a quite high frequency of a particular peptide, and thus implies a high therapeutic value for the respective peptide.
[0058] Especially in cases, where a frequency is to be determined related to a particular tumor entity or related to particular stages of the tumorigenesis, the population of samples may be restricted.
[0059] The mutation may occur at any time during the tumor evolution and may be persistent or may be eliminated from the genome. Thus the frequency may comprise the frequency of the expression of a peptide at a particular stage of tumorigenesis or the occurrence of a genetic mutation at a particular defined stage of tumorigenesis. In one embodiment of the invention the frequency for the mutation is determined taking into account the widest possible range of samples. In this embodiment the method disclosed herein may be especially useful for the preventive vaccination of tumors. In another embodiment of the present invention the frequencies of mutation are related to specified tumor entities. In this embodiment the method according to the present invention may e.g. especially be useful for immuno-therapeutic approaches in treatment of tumors or in the preventive vaccination of particular subpopultions with an elevated risk for the occurrence of particular tumors. In a third embodiment of the present invention the frequency may be related to particular stages in tumorigenesis of particular tumors. This embodiment may be e.g. especially useful for the treatment of diagnostically defined tumors or for adjuvant treatment of tumors simultaneously or following primary treatment of tumors.
[0060] Using frameshift polypeptides, that occur with a high frequency, the probability, that a particular tumor expresses the peptide and may thus be recognized by antibodies or antigen-recognizing cells, increases. By combination of multiple such polypeptides, the probability to address particular tumor cells further is raised. Preferred frameshift polypeptides according to the present invention occur in at least 25%, more preferred frameshift polypeptides in at least 30% and most preferred frameshift polypeptides in at least 33% of the cases of the particular condition to be treated by the method according to the present invention.
[0061] According to the present invention the polypeptides are chosen to be expressed with a high frequency, thus the set of polypeptides may be limited to a number of members and nonetheless may cover a range of occurring diseases as wide as possible. For example a set of 10 polypeptides, each occurring with a frequency of more than 30 percent will statistically cover a range of more than 95% of the potentially existing disorders, as far as they have been included in the studies leading to the respective frequencies. Using 7 polypeptides requires the application of polypeptides with higher frequencies in order to cover a range of about 95% of potentially existing tumors. Using a set of polypeptides derived from enormously frequent mutated microsatellite regions may also allow for the employment of a set of only five different polypeptides without lowering the range of potentially addressed tumors. Thus the set of polypeptides comprises in a preferred embodiment at least 5, in a more preferred embodiment at least 7 and in the most preferred embodiment at least 10 different frameshift polypeptides.
[0062] A second aspect influencing the choice of a suitable set of frameshift polypeptides concerns the type of mutation found in the microsatellite region. Frameshift mutations microsatellites are usually due to DNA polymerase slippage and may be characterized by the type of the repeat. Thus in mono nucleotides repeats this type of mutation renders 1 nt insertion or deletion. In dinucleotide repeats and tetranucleotide repeats mutations are insertions or deletions of 2 or 4 nt respectively. (Polypeptides encoded by genes with coding microsatellites and the respective polypeptides encoded by genes with frameshift mutations are given in FIGS. 2-1 to 2-8) For example commonly (-1) mutations occur in mononucleotide repeats (MNRs). In these mutations one nucleotide is deleted such that the reading frame is shifted by one nucleotide toward the 5' end of the gene compared to the original reading frame. This type of mutation renders a reading frame identical to that produced by (+2) mutations, which arise from two nucleotide insertions in the respective microsatellites. The respective (-1) or (+2) polypeptides might differ by one amino acid. The other frameshift mutation variant leading to frameshift mutations differing from (-1) mutations concerning the resulting reading frame is the (+1) mutation, arising from one nucleotide insertion, thus rendering a reading frame shifted one nucleotide toward the 3' end of the gene compared to the original reading frame. This mutation type gives a reading frame identical to that of (-2) mutations, wherein the encoded polypeptides differ by one amino acid. (-3) and (+3) mutations are irrelevant according to the present invention, for they do not give rise to frameshift polypeptides. According to the present invention the polypeptides included within the set shall be selected as to cover the widest possible range of tumors. Thus a set comprises for example (-1) frameshift polypeptides and additionally (+1) frameshift polypeptides. Using more than one possible novel reading frame of the particular gene broadens the spectrum of target cells and thus may prevent escape of particular cells from being eliminated according to the present invention.
[0063] A further aspect influencing the choice of the member polypeptides included in a set of frameshift polypeptides according to the present invention is the involvement of the gene encoded for by the coding sequence containing the respective microsatellite in particular biochemical pathways. The term biochemical pathway is used with a rather broad meaning herein. Biochemical pathways as used within this document shall for example include signal transduction pathways, enzymatic pathways, metabolic pathways, the apoptosis pathway, DNA repair or polymerization pathways, the pathway of meiosis etc. To broaden the spectrum of tumors to be addressed by the set of frameshift polypeptides, members of different pathways are included in the set. In a preferred embodiment at least 5 different pathways, in a more preferred embodiment at least 4 different pathways and in the most preferred embodiment at least 3 different pathways are represented by the frameshift polypeptides in a set according to the present invention. For example the TGWU as a member of a signal transduction pathway may be used in combination with the BAX gene as a member of the apoptosis pathway with additional other polypeptides associated with other pathways.
[0064] A final aspect influencing the choice of suitable frameshift polypeptides to be included in the set according to the present invention is the length of the novel (poly)peptide sequence arising from the mutation. The shift of the reading frame leads to novel stop codons. Thus the new peptides are not of the same length as the polypeptides naturally encoded by the particular gene. In most cases the new peptides are shorter or even significantly shorter than the original wild-type polypeptide. Frequently rather oligopeptides arise from the frameshift mutations. The fidelity of the immune system in recognizing "foreign" molecules reaches thus far, to identify even polypeptides, that differ from "own" polypeptides in only one single amino-acid mutation. The fragments, bound by the antigen presenting HLA molecules comprise about 12 amino acid residues. To enhance the fidelity of recognition of new polypeptides more than one single amino-acid difference should be present. A polypeptide comprising 3 consecutive amino acids differing from the wild-type amino acid sequence is reliably recognized as foreign by the immune system. This may be due to the increased probability of new amino acid combinations being present in different fragments produced by the antigen presenting machinery. Thus the frameshift polypeptides according to the present invention contain at least one new amino acid, not present in the wild-type polypeptide, in a more preferred embodiment at least 2 new amino acids and in the most preferred embodiment at least 3 new amino acids.
[0065] According to the named parameters a basic set of frameshift polypeptides may be tailored, that is suitable to address a large variety of tumors and minimizes the danger of escape of single tumor cells from the therapy. Thus the probability of survival of tumor cells in an organism following immuno-therapy can be minimized and the rate of recurrence of the cancer can be reduced.
[0066] A basic set of frameshift polypeptides includes frameshift polypeptides, that do occur with a high mutation frequency in associated disorders. Additionally the polypeptides within the set are chosen to be involved in different biochemical pathways. The mutation types are chosen, that polypeptides of a minimal length of 3 amino acid residues is expressed from the mutated nucleic acid sequence. Furthermore different mutation types of one single microsatellite may be included in the set if applicable.
[0067] Examples of basic sets of frameshift polypeptides for use in therapeutic as well as diagnostic methods of the present invention include:
TABLE-US-00001 Set1: HT001 U79260 MACS Set2: HT001 TAF1B MACS Set3: HT001 TGFB2R MACS Set4: HT001 U79260 TGFB2R Set5: HT001 U79260 TAF1B Set6: HT001 TGFB2R TAF1B Set7: HT001 U79260 TGFB2R MACS Set8: HT001 U79260 TGFB2R AC1 Set9: HT001 U79260 TGFB2R TAF1B Set10: HT001 TGFB2R MACS CASP5 Set11: HT001 U79260 MACS CASP5 Set12: HT001 U79260 MACS AC1 Set13: HT001 TGFB2R TAF1B CASP5 Set14: HT001 U79260 MACS OGT Set15: U79260 TGFB2R AC1 CASP5 Set16: HT001 U79260 TGFB2R MACS AC1 Set17: HT001 U79260 TGFB2R TAF1B MACS Set18: HT001 U79260 TGFB2R TAF1B AC1 Set19: HT001 U79260 TGFB2R MACS AIM2 Set20: HT001 U79260 TGFB2R TAF1B AIM2 Set21: U79260 TGFB2R TAF1B AC1 CASP5 Set1: HT001 U79260 TGFB2R AC1 CASP5 Set22: U79260 TGFB2R MACS AC1 CASP5 Set23: HT001 U79260 TAF1B MACS AC1 Set24: HT001 U79260 TAF1B MACS CASP5 Set1: HT001 U79260 MACS AC1 OGT Set25: HT001 U79260 MACS MSH3 OGT Set26: HT001 U79260 TGFB2R MACS OGT Set27: HT001 TGFB2R TAF1B AC1 CASP5 Set28: HT001 U79260 TGFB2R AC1 AIM2
[0068] Additional to the parameters given above, data concerning the particular disorder in focus are taken into account for the design of particular sets of frameshift peptides according to the present invention. Thus individual mutation frequencies, typical mutation types, relevant biochemical pathways or special immunological characteristics may contribute to the set to be used in particular cases. Furthermore in particular cases based on results of examination of particular samples of individuals vaccines may be tailored as to optimally fit the therapy of the respective disorder. In one embodiment of the present invention individual tumor vaccine compositions may be set up according to molecular profiling of individual tumors
[0069] Choosing suitable combinations of the peptides within the mixture of frameshift peptides thus enables for generation of therapeutic or diagnostic preparations with a wide range of applicability. E.g. vaccines that elicit immune response specifically for tumors of particular organs. On the other hand it is possible to design sets of frameshift polypeptides that cover a wide range of degenerative disorders or cancers in individuals. The first possibility may e.g. be especially useful for the design of curative treatment, whereas the second variant of sets may be of special interest for the design of preventive vaccines.
[0070] The compositions and methods according to the present invention may be applied to any eukaryotic organisms exhibiting an immunologic defence system. The eukaryotic organisms are for example animals of agricultural value such as pigs, cows, sheep, etc., companion animals, such as cats, dogs, horses etc., animals employed in research purposes such as mice, rats, rabbits, hamsters etc. or humans.
[0071] Therapeutic methods for use in the present invention comprise immunogenic treatment such as vaccination therapy or generally immuno-therapy. The vaccines for use in the present invention comprise for example one or more sets of frameshift polypeptides.
[0072] According to the present invention frameshift polypeptides that comprise an immunogenic portion may be used for immuno-therapy for the treatment of cancer. Immunotherapy may be broadly classified into either active or passive immunotherapy. In active immunotherapy, treatment relies on the in vivo stimulation of the endogenous host immune system to react against tumors with the administration of immune response-modifying agents (for example, tumor vaccines, bacterial adjuvants, and/or cytokines). A patient may be afflicted with disease, or may be free of detectable disease. Accordingly, the compounds disclosed herein may be used to treat cancer or to inhibit the development of cancer. The compounds are preferably administered either prior to or following primary treatment of tumors such as surgical removal of the tumors, treatment by administration of radiotherapy and/or conventional chemotherapeutic drugs or any other mode of treatment of the respective cancer or its precursors.
[0073] In passive immunotherapy, treatment involves the delivery of biologic reagents with established tumor-immune reactivity (such as effector cells or antibodies) that can directly or indirectly mediate antitumor effects and does not necessarily depend on an intact host immune system. Examples of effector cells include T lymphocytes (for example, CD8+ cytotoxic T-lymphocytes, CD4+ T-helper, tumor-infiltrating lymphocytes), killer cells (such as Natural Killer cells, lymphokine-activated killer cells), B cells, or antigen presenting cells (such as dendritic cells and macrophages) expressing the disclosed antigens. The polypeptides disclosed herein may also be used to generate antibodies or anti-idiotypic antibodies (as in U.S. Pat. No. 4,918,164), for passive immunotherapy.
[0074] The predominant method of procuring adequate numbers of T-cells for adoptive transfer immunotherapy is to grow immune T-cells in vitro. Culture conditions for expanding single antigen-specific T-cells to several billion in number with retention of antigen recognition in vivo are well known in the art. These in vitro culture conditions typically utilize intermittent stimulation with antigen, often in the presence of cytokines, such as IL-2, and non-dividing feeder cells. As noted above, the immunoreactive polypeptides described herein may be used to rapidly expand antigen-specific T-cell cultures in order to generate sufficient number of cells for immunotherapy. In particular, antigen-presenting cells, such as dendritic-, macrophage- or B-cells, may be pulsed with immunoreactive polypeptides or transfected with a nucleic acid sequence(s), using standard techniques well known in the art. For example, antigen presenting cells may be transfected with a nucleic acid sequence, wherein said sequence contains a promoter region appropriate for increasing expression, and can be expressed as part of a recombinant virus or other expression system. For cultured T-cells to be effective in therapy, the cultured T-cells must be able to grow and distribute widely and to survive long term in vivo. Studies have demonstrated that cultured T-cells can be induced to grow in vivo and to survive long term in substantial numbers by repeated stimulation with antigen supplemented with IL-2 (see, for example, Cheever, M., et al, "Therapy With Cultured T-Cells: Principles Revisited," Immunological Reviews, 157:177, 1997).
[0075] According to the present invention sets of frameshift polypeptides may be employed to generate and/or isolate tumor-reactive T-cells, which can then be administered to the patient. In one technique, antigen-specific T-cell lines may be generated by in vivo immunization with short peptides corresponding to immunogenic portions of the disclosed polypeptides. The resulting antigen specific CD8+ CTL or CD4+T-helper cells clones may be isolated from the patient, expanded using standard tissue culture techniques, and returned to the patient.
[0076] Alternatively, peptides corresponding to immunogenic portions of the polypeptides of the invention may be employed to generate tumor reactive T-cell subsets by selective in vitro stimulation and expansion of autologous T-cells to provide antigen-specific T-cells which may be subsequently transferred to the patient as described, for example, by Chang et al. (Crit. Rev. Oncol. Hematol., 22(3), 213, 1996). Cells of the immune system, such as T-cells, may be isolated from the peripheral blood of a patient, using a commercially available cell separation system, such as CellPro Incorporated's (Bothell, Wash.) CEPRATE.TM. system (see U.S. Pat. Nos. 5,240,856; 5,215,926; WO 89/06280; WO 91/16116 and WO 92/07243). The separated cells are stimulated with one or more of the immunoreactive polypeptides contained within a delivery vehicle, such as a microsphere, to provide antigen-specific T-cells. The population of tumor antigen-specific T-cells is then expanded using standard techniques and the cells are administered back to the patient.
[0077] In another embodiment, T-cell receptors and/or antibodies specific for the polypeptides can be cloned, expanded, and transferred into other vectors or effector cells for use in adoptive immunotherapy.
[0078] In a further embodiment, syngeneic or autologous dendritic cells may be pulsed with peptides corresponding to at least an immunogenic portion of a polypeptide disclosed herein. The resulting antigen-expressing and/or presenting dendritic cells may either be transferred into a patient, or employed to stimulate T-cells to provide antigen-specific T-cells which may, in turn, be administered to a patient. The use of peptide-pulsed dendritic cells to generate antigen-specific T-cells and the subsequent use of such antigen-specific T-cells to eradicate tumors in a murine model has been demonstrated by Cheever et al, (Immunological Reviews, 157:177, 1997).
[0079] Monoclonal antibodies directed against frameshift peptides presented on cellular membranes may according to the present invention also be used as therapeutic compounds in order to diminish or eliminate tumors. The antibodies may be used on their own (for instance, to inhibit metastases) or coupled to one or more therapeutic agents. Suitable agents in this regard include radionuclides, differentiation inducers, drugs, toxins, and derivatives thereof. Preferred radionuclides include 90Y, 1231, 1251, 1311, 186Re, 188Re, 211At, and 212Bi. Preferred drugs include methotrexate, and pyrimidine and purine analogues. Preferred differentiation inducers include phorbol esters and butyric acid. Preferred toxins include ricin, abrin, diptheria toxin, cholera toxin, gelonin, Pseudomonas exotoxin, Shigella toxin, and pokeweed antiviral protein.
[0080] Pharmaceutical compositions useful in immuno-therapy according to the present invention may comprise a set of at least 3, 4, 5, 6, 7, 8, 9 or 10 frameshift polypeptides (or variants thereof). Moreover sets of frameshift polypeptides may comprise 5 to 20, 7 to 30 or even ore than 15, 20 or 30 frameshift peptides (or variants thereof). (or variants thereof), In certain embodiments the pharmaceutical compositions comprise the frameshift polypeptides and a physiologically acceptable carrier. The vaccines may additionally comprise a non-specific immune-response enhancer, wherein the non-specific immune response enhancer is capable of eliciting or enhancing an immune response to an exogenous antigen. Examples of non-specific-immune response enhancers include adjuvants, biodegradable microspheres (e.g., polylactic galactide) and liposomes (into which the polypeptide is incorporated). Pharmaceutical compositions and vaccines may also contain other epitopes of tumor antigens, either incorporated into a fusion protein or present within a separate polypeptide.
[0081] Alternatively, a pharmaceutical composition or vaccine suitable for immunotherapy according to the present invention may contain nucleic acids, that code for one or more frameshift polypeptides according to the present invention. Nucleic acids may for example include single-stranded (sense or antisense) or double-stranded molecules, and may be DNA (genomic, cDNA or synthetic) or RNA. RNA molecules comprise as well HnRNA (containing introns) as mRNA (not containing introns). According to the present invention the polynucleotides may also be linked to any other molecules, such as support materials or detection marker molecules, and may, but need not, contain additional coding or non-coding sequences. The nucleic acid may be administered in a way that allows the polypeptides to be generated in situ. Suitable expression systems are known to those skilled in the art. The expression of the polypeptides may for example be persistent or transient. In pharmaceutical compositions and/or vaccines, providing for in-situ expression of polypeptides, the nucleic acids may be present within any suitable delivery system known to those of ordinary skill in the art, including nucleic acid expression systems, bacteria and viral expression systems.
[0082] Appropriate nucleic acid expression systems comprise the necessary regulatory nucleic acid sequences for expression in the patient, such as suitable promoters, terminators etc. Bacterial delivery systems may for example employ the administration of a bacterium that expresses an epitope of a cell antigen on its cell surface. In a preferred embodiment, the nucleic acid may be introduced using a viral expression system such as e.g., vaccinia virus, retrovirus, or adenovirus, which may involve the use of a non-pathogenic, replication competent virus. Suitable systems are known to those of ordinary skill in the art and are disclosed, for example, in Fisher-Hoch et al., PNAS 86:317-321, 1989; Flexner et al., Ann. N.Y. Acad Sci. 569:86-103, 1989; Flexner et al., Vaccine 8:17-21, 1990; U.S. Pat. Nos. 4,603,112, 4,769,330, and 5,017,487; WO 89/01973; U.S. Pat. No. 4,777,127; GB 2,200,651; EP 0,345,242; WO 91/02805; Berkner, Biotechniques 6:616-627, 1988; Rosenfeld et al., Science 252:431-434, 1991; Kolls et al., PNAS 91:215-219, 1994; Kass-Eisler et al., PNAS 90:11498-11502, 1993; Guzman et al., Circulation 88:2838-2848, 1993; and Guzman et al., Cir. Res. 73:1202-1207, 1993.
[0083] In another embodiment transgenic mammalian cells may be used for delivery and/or expression of the nucleic acids. The methods for producing nucleic acid constructs suitable for in-situ expression of polypeptides are known to those of skill in the art.
[0084] Furthermore the nucleic acid may be administered as naked nucleic acids. In this case appropriate physical delivery systems, which enhance the uptake of nucleic acid may be employed, such as coating the nucleic acid onto biodegradable beads, which are efficiently transported into the cells. Administration of naked nucleic acids may for example be useful for the purpose of transient expression within a host or host cell.
[0085] The pharmaceutical compositions used for immuno-therapy according to the present invention may be administered by any suitable way known to those of skill in the art. The administration may for example comprise injection, such as e.g., intra-cutaneous, intramuscular, intravenous or subcutaneous injection, intranasal administration for example by aspiration or oral administration. A suitable dosage to ensure the pharmaceutical benefit of the treatment should be chosen according to the parameters, such as age, sex, body weight etc. of the patient, known to those of skill in the art.
[0086] The type of carrier to be employed in the pharmaceutical compositions of this invention, will vary depending on the mode of administration. For parenteral administration, such as subcutaneous injection, the carrier preferably comprises water, saline, alcohol, a lipid, a wax and/or a buffer. For oral administration, any of the above carriers or a solid carrier, such as mannitol, lactose, starch, magnesium stearate, sodium saccharine, talcum, cellulose, glucose, sucrose, and/or magnesium carbonate, may be employed. Biodegradable microspheres (e.g., polylactic glycolide) may also be employed as carriers for the pharmaceutical compositions of this invention. Suitable biodegradable microspheres are disclosed, for example, in U.S. Pat. Nos. 4,897,268 and 5,075,109. Any of a variety of immune-response enhancers may be employed in the vaccines of this invention. For example, an adjuvant may be included. Most adjuvants contain a substance designed to protect the antigen from rapid catabolism, such as aluminum hydroxide or mineral oil, and a nonspecific stimulator of immune response, such as lipid A, Bordetella pertussis or Mycobacterium tuberculosis. Such adjuvants are commercially available as, for example, Freund's Incomplete Adjuvant and Complete Adjuvant (Difco Laboratories, Detroit, Mich.) and Merck Adjuvant 65 (Merck and Company, Inc., Rahway, N.J.).
[0087] The pharmaceutical compositions or immuno-therapeutic methods according to the present invention may be used for the treatment of degenerative disorders or cancers. For example the compositions and methods may be employed in the therapy of diagnosed cancers in order to eliminate the tumor cells from the affected organism. As well primary tumors as metastases or disseminated tumor cells within an organism may be targets to the therapeutic compounds and methods disclosed herein.
[0088] Furthermore the compositions and methods of the invention may be employed in the treatment of pre-neoplastic conditions. In this case the pre-neoplastic cells or tissues may be directly addressed by the immuno-therapeutic compositions or methods, or may be hindered from evolving into neoplastic or dysplastic conditions. For example in this case the pre-neoplastic condition may be treated preventively. By the vaccination the immune response may be elicited, so that emerging neoplasms may be destroyed.
[0089] The methods and compositions according to the present invention may also be used for the prevention of degenerative disorders or cancers associated with frameshift mutations in coding microsatellites. For this purpose a vaccination of a population of organisms or of subgroups of said population may be performed. The subgroups may be built by suitable parameters such as hereditary predisposition for the emergence of degenerative disorders, exposure to factors, that increase the risk of being affected by said disorders etc.
[0090] In one embodiment of the present invention the peptides disclosed herein may be used for the diagnosis of disorders associated with frameshift mutations in coding microsatellite regions.
[0091] Diagnosis as used in the context of the present invention may comprise determining the presence or absence and/or the level of frameshift peptides or of specific immunological entities directed against particular frameshift peptides in a sample, and assessing diagnosis from said presence or absence and/or level of frameshift peptides and/or immunological entities specifically directed against said frameshift polypeptides.
[0092] Based upon the determined presence or absence and/or the levels of frameshift peptides or of immunological entities specifically directed against particular frameshift peptides in the samples individuals can be subdivided into subgroups. The subgroups may be created according to scientific or clinical data, such as e.g. survival, recurrence of disease, frequency of metastases etc., related to the presence or absence and/or levels of frameshift peptides or of particular frameshift peptides in samples of tissues affected with a particular disorder, of tissues being in question of being affected with a particular disorder or of tissues at risk of being affected with a particular disorder.
[0093] Based upon these subgroups an assessment of prognosis may be done. According to the subgroups the therapy of the individuals affected by the disorders (e.g. tumors) may be tailored.
[0094] Monitoring may comprise detecting the presence or absence or level of frameshift peptides or of immunologic entities specifically directed against frameshift polypeptides in samples taken at different points in time and determining the changes in said levels or presences or absences. According to said changes the course of the disease can be followed. E.g. the occurrence of frameshift peptides or of immunologic entities directed against frameshift peptides, that have not been present at an earlier time-point may be indicative of the progression of evolution of the affected tissue. The course of the disease may be used to select therapy strategies for the particular individual.
[0095] Another aspect of diagnosis and monitoring of the disease course according to the present invention may comprise the detection of minimal residual disease. This may comprise for example the detection of presence and/or level of frameshift peptides or of immunologic entities specifically directed against said frameshift polypeptides, that have not been present in earlier examinations in one or more body samples following initial therapy of an individual once or at several time points. According to the presence and/or level of frameshift peptides or of immunologic entities specifically directed against new frameshift polypeptides detected in the samples one may select a suitable therapy for the particular individual.
[0096] Furthermore the diagnostic method may be carried out to detect disseminated tumor cells in biological samples as MRD diagnosis of minimal residual disease. For this purpose the detection of the level of immunological entities or the presence of frameshift peptides or of immunological entities, specific for particular frameshift peptides, that have not been detected in prior examinations, may be performed.
[0097] Immunological entities as used in the context of the present invention shall comprise any components of the mammalian immune system, that are able to specifically react with an antigenic epitope. Such immunological entities may comprise for example antibodies, all immunoglobulins, such as e.g. IgG, IgM, IgA, IgE, IgD, specific CD8+ T-cells or specific T-helper cells.
[0098] A sample according to the method of the present invention may comprise any sample comprising frameshift peptides or immunological entities as defined above. Samples may comprise samples of clinical relevance, such as e.g. secretions, smears, body fluids, urine, semen, stool, bile, biopsies, cell- and tissue-samples. Biopsies as used in the context of the present invention may comprise e.g. resection samples of tumors, tissue samples prepared by endoscopic means or needle biopsies of organs.
[0099] Such samples may comprise for example intact cells, lysed cells or any liquids containing polypeptides, antibodies, immunoglobulins or cells specifically directed against frameshift peptides. Even solids, to which peptides, cells, cell fragments or antigen binding polypeptides, such as antibodies or immunoglobulins may adhere, or may be fixed to, may be samples according to the method disclosed herein. The method for detection of the level of the frameshift peptides or of the immunological entities according to the present invention is any method, which is suited to detect very small amounts of specific frameshift peptides or of specific immunological entities in biological samples. The detection reaction according to the present invention is a detection either on the level of polypeptides, nucleic acids, antibodies or on the level of cells specific for particular antigens.
[0100] For diagnostic purposes detection procedures related to one single frameshift polypeptides or to immunological entities specifically recognizing said frameshift peptides may be performed. Furthermore detection procedures may be performed that are tailored to display the presence or absence or the level of one or more sets of polypeptides or immunological entities directed against these polypeptides, wherein the sets have been put together according to rational combinatorial parameters as they are given below.
[0101] The detection may be carried out in solution or using reagents fixed to a solid phase. Solid phases may comprise beads of a variety of materials, such as e.g. agarose, dextrane polymers, polystyrene, silica, etc. or surfaces of suitable materials such as e.g. polystyrene, glass, agarose, protein, dextran etc. coated surfaces etc. The detection of one or more immunological entities, such as immunoglobulins or cells carrying specific antigen recognizing epitopes, with different antigen binding specificities may be performed in a single reaction mixture or in two or more separate reaction mixtures. Alternatively the detection reactions for several immunological entities may for example be performed simultaneously in multi-well reaction vessels.
[0102] Applicable formats for the detection reaction according to the present invention may be, (reverse) blotting techniques, such as Western-Blot. The blotting techniques are known to those of ordinary skill in the art and may be performed for example as electro-blots, semidry-blots, vacuum-blots or dot-blots. Furthermore immunological methods for detection of molecules may be applied, such as for example immunoprecipitation or immunological assays, such as ELISA, RIA, Elispot assay, lateral flow assays, immuno-cytochemical methods etc.
[0103] The immunological entities specifically recognizing particular frameshift peptides may be detected using reagents that specifically recognise these immunological entities alone or in complex with their respective antigen (e.g. antibodies), or reagents, that are specifically recognized by the immunological entities themselves (e.g. the antigen). In one embodiment the antigen may be fused to another polypeptide, so as to allow binding of the antigen by the immunological entity in question and simultaneously binding of the second part of the fusion protein by another (labelled) antibody for the detection. The detection reaction for the immunological entities may comprise one or more reactions with detecting agents either recognizing the initial entities or recognizing the prior molecules used to recognize the immunological entities.
[0104] The detection reaction further may comprise a reporter reaction indicating the presence or absence and/or the level of the immunological entities. The reporter reaction may be for example a reaction producing a coloured compound, a bioluminescence reaction, a chemiluminescent reaction, a fluorescence reaction, generally a radiation emitting reaction etc. The detection reactions may for example employ antibodies or binding reagents that are detectably labelled.
[0105] Furthermore the binding of detection molecules to the entities in question may be detected by any measurable changes in physical or physical-chemical properties, such as changes in spectroscopic properties, in magnetic resonance properties etc. Different immunological entities or immunological entities of different specificities may be recognized by different methods or agents. This may be due to difficulties in detection of several entities, or entities with particular specificities by a particular method. An advantage of the use of different detection techniques for different immunological entities or for immunological entities with different specificities may for example be, that the different reporter signals referring to different immunological entities could be distinguished.
[0106] Generally in a method according to the present invention the detection of different immunological entities such as the detection of immunoglobulins and the detection of immunocompetent cells may be performed simultaneously.
[0107] For all detection purposes optionally the original sample may be concentrated by any suitable means known to those of ordinary skill in the art. Furthermore steps may be involved to selectively extract immunological entities from the sample mixture such as affinity based purification techniques either employing specific antibodies or the respective antigen recognized by the entities in question.
[0108] In one preferred embodiment of the invention the detection of the level of immunological entities specific for frameshift peptides is carried out on the level of antibodies. This may be e.g. performed using the specific interaction between the respective frameshift peptides with the antibodies. The determination of the presence or absence and/or the level of the antibodies may for example be carried out with recombinantly produces frameshift peptides. The peptides can be used in many different detection techniques for example in western-blot, ELISA or immuno-precipitation. In one embodiment the detection of antibodies is carryout as antibody capture assay (Antibodies A laboratory Manual, Harlow, Ed. et al., Cold Spring Harbor Laboratory 1988).
[0109] In another embodiment of the invention the detection of the specific antibodies is carried out using monoclonal or polyclonal antibodies specifically recognizing the antigen binding epitope of the first antibodies. For this purpose the above mentioned immunological detection procedures may be applied. In a further embodiment chimeric antigens may be employed in the detection reaction. Such chimeric antigens may for example comprise fusion proteins combining the antigenic epitope of a frameshift polypeptide, recognized by the antibody in question, fused to another antigen, that may be recognized by a detection antibody. The particular antigens within the chimeric polypeptide may be separated by a linker or spacer region.
[0110] Any other method for determining the amount of particular antibodies or immunoglobulins in biological samples can be used according to the present invention.
[0111] Generally the detection of the antibodies according to the present invention may be performed as well in vitro as directly in situ for example in the course of an immuno-histochemical or immuno-cytochemical staining reaction.
[0112] Cells exhibiting specificity for a particular antigen may be detected by any methods suitable for that purpose known to those of ordinary skill in the art. Methods may for example comprise proliferation-assays, cytokine-ELISAs, ELISpot assays, intracellular FACS-staining, PCR-mediated identification of peptide-specific cytokine (or similar)--expressing cells, tetramer-staining, cytotoxicity assays and DTH-(delayed type hypersensitivity) reactions.
[0113] In case of proliferation-assays induction of peptide-specific T-cell proliferation may be measured by methods known to those of skill in the art. This can be achieved by simply counting of cells, by measuring incorporation of labelled nucleotides into cellular DNA or by measuring level and/or activity of cellular protein(s). Cytokine-ELISA may comprise identification of peptide-specific cytokine-secreting cells by measuring cytokine levels in supernatant. In the course of an ELISpot assay the number of peptide-specific cytokine (i.e. IFN-g)-secreting cells in a sample is determined. Similarly the Intracellular FACS-staining identifies cytokine-expressing cells on the protein level. In contrast (real-time) PCR may be used for identification of peptide-specific cytokine (or similar)--expressing cells on the transcript level. In the course of a tetramer-staining assay the label is a tetramer-molecule of recombinant MHC-class I molecules, loaded with specific peptide and coupled to a dye. The tetramer binds to the T-cell receptor. Cytotoxicity assays are a method for identification of cells, that can recognize and kill target cells in a peptide-specific manner. DTH-(delayed type hypersensitivity) reaction is based on the measuring of skin reaction of vaccinated persons after intradermal (or similar) application of peptide(s).
[0114] In a preferred embodiment of the invention the detection of the immunological entities directed against particular frameshift polypeptides is carried out on the level of antibodies. In this embodiment the binding agent may be for example a frameshift polypeptide or a fragment thereof, recognized by the respective antibody, or a fusion polypeptide comprising said frameshift polypeptide or a fragment thereof. Furthermore the binding agent may comprise an antibody or a fragment thereof specific for the antibody in question, for the complex of the antibody with the respective frameshift polypeptide or for an antigenic epitope fused to the frameshift polypeptide.
[0115] In another embodiment of the test kit the detection of the immunological entities is carried out on the level of cells specifically recognizing frameshift polypeptides. In this embodiment of the invention the reagent for the detection may be for example a frameshift polypeptide or a fragment thereof, recognized by the respective antibody or T-cell receptor, or a fusion polypeptide comprising said frameshift polypeptide or a fragment thereof. Furthermore the binding agent may comprise an antibody or a fragment thereof specific for the antibody in question, for the complex of the antibody with the respective frameshift polypeptide or for an antigenic epitope fused to the frameshift polypeptide.
[0116] The method for detection of the level of the frameshift polypeptides according to the present invention is any method, which is suited to detect very small amounts of specific biologically active molecules in biological samples. The detection reaction according to the present invention is a detection either on the level of nucleic acids or on the level of polypeptides.
[0117] The detection may be carried out in solution or using reagents fixed to a solid phase. The detection of one or more molecular markers, such as polypeptides or nucleic acids, may be performed in a single reaction mixture or in two or separate reaction mixtures. Alternatively the detection reactions for several marker molecules may for example be performed simultaneously in multi-well reaction vessels. The markers characteristic for the frameshift polypeptides may be detected using reagents that specifically recognise these molecules. The detection reaction for the marker molecules may comprise one or more reactions with detecting agents either recognizing the initial marker molecules or recognizing the prior molecules used to recognize other molecules.
[0118] In one preferred embodiment of the invention the detection of the level of frameshift polypeptides is carried out by detection of the level of nucleic acids coding for the frameshift polypeptides or fragments thereof present in the sample. The means for detection of nucleic acid molecules are known to those skilled in the art. The procedure for the detection of nucleic acids can for example be carried out by a binding reaction of the molecule to be detected to complementary nucleic acid probes, proteins with binding specificity for the nucleic acids or any other entities specifically recognizing and binding to said nucleic acids. This method can be performed as well in vitro as directly in situ for example in the course of a detecting staining reaction. The use of this detection procedure is restricted to cases, where hybridisation properties of the respective frameshift mutations are significantly altered in comparison to the respective wild-type nucleic acids. Another way of detecting the frameshift polypeptides in a sample on the level of nucleic acids performed in the method according to the present invention may comprise an amplification reaction of nucleic acids. In these cases a subsequent reaction displaying the presence or absence of a frameshift mutation within the coding microsatellite region is necessary.
[0119] In another preferred embodiment of the invention the detection of the level of frameshift polypeptides is carried out by determining the level of expression of a protein. The determination of the frameshift polypeptides on the protein level can for example be carried out in a reaction comprising an antibody specific for the detection of the frameshift polypeptides. The antibodies can be used in many different detection techniques for example in western-blot, ELISA or immuno-precipitation. Generally antibody based detection can be carried out as well in vitro as directly in situ for example in the course of an immuno-histochemical staining reaction. Any other method for determining the amount of particular polypeptides in biological samples can be used according to the present invention.
[0120] Furthermore according to the present invention diagnosis may comprise detection of immunological entities specifically recognizing particular frameshift peptides using reagents that specifically recognise these immunological entities alone or in complex with their respective antigen (e.g. antibodies), or reagents, that are specifically recognized by the immunological entities themselves (e.g. the antigen). In one embodiment the antigen may be fused to another polypeptide, so as to allow binding of the antigen by the immunological entity in question and simultaneously binding of the second part of the fusion protein by another (labelled) antibody for the detection. The detection reaction for the immunological entities may comprise one or more reactions with detecting agents either recognizing the initial entities or recognizing the prior molecules used to recognize the immunological entities.
[0121] The detection reaction further may comprise a reporter reaction indicating the presence or absence and/or the level of the frameshift polypeptides or of the immunological entities. The reporter reaction may be for example a reaction producing a coloured compound, a bioluminescence reaction, a chemiluminescent reaction, a fluorescence reaction, generally a radiation emitting reaction etc. The detection reactions may for example employ antibodies or binding reagents that are detectably labelled.
[0122] Furthermore the binding of detection molecules to the peptides or immunological entities in question may be detected by any measurable changes in physical or physical-chemical properties, such as changes in spectroscopic properties, in magnetic resonance properties etc. Different polypeptides or immunological entities or immunological entities of different specificities may be recognized by different methods or agents. This may be due to difficulties in detection of several entities, or entities with particular specificities by a particular method. An advantage of the use of different detection techniques for different polypeptides and/or immunological entities or for immunological entities with different specificities may for example be, that the different reporter signals referring to different immunological entities could be distinguished.
[0123] Generally in a method according to the present invention the detection of different polypeptides, of different immunological entities such as the detection of immunoglobulins and the detection of immunocompetent cells may be performed simultaneously.
[0124] For all detection purposes optionally the original sample may be concentrated by any suitable means known to those of ordinary skill in the art. Furthermore steps may be involved to selectively extract polypeptides and/or immunological entities from the sample mixture such as affinity based purification techniques either employing specific antibodies or the respective antigen recognized by the entities in question.
[0125] Another aspect of the present invention is a testing kit for performing the method according to the present invention. The kit may be for example a diagnostic kit or a research kit.
[0126] A kit according to the present invention comprises at least an agent suitable for detecting the immunological entities according to the method disclosed herein. Furthermore a kit according to present invention may comprise:
[0127] a) reagents for the detection of the antibodies or cells specifically recognizing antigens.
[0128] b) reagents and buffers commonly used for carrying out the detection reactions as described herein, such as buffers, detection-markers, carrier substances and others
[0129] c) a sample for carrying out a positive control reaction, that may comprise an antigen or a set of antigens, to which all members of a target population of individuals have antibodies.
[0130] The reagent for the detection of the antibodies or cells specifically recognizing antigens may include any agent capable of binding to the antibodies or cells specifically recognizing antigens. Such reagents may include proteins, polypeptides, nucleic acids, peptide nucleic acids, glycoproteins, proteoglycans, polysaccharides or lipids.
[0131] The sample for carrying out a positive control may comprise for example an antigenic peptide or a set of antigenic peptides. Suitable antigens may include antigens, against which a wide percentage of the population has antibodies. Examples of such antigens may for example comprise antigens present in lysed E. coli cells, tetanus antigen, the viral capsid antigen of the Epstein-Barr virus, antigens derived from matrix proteins of Haemophilus influenzae. The antigens may for example be used as a mixture to ensure, that a particular individual actually displays a positive reaction.
[0132] The present invention provides compositions and methods for enhanced immunotherapy of disorders associated with MSI.sup.+ related occurrence of frameshift peptides. The invention provides sets for the immuno-therapy of said disorders, that address a wide range of different types of disorders in an organism and may thus be employed as a preventive vaccine against said disorders. Furthermore the invention also provides sets of polypeptides useful for the treatment of particular types of disorders. The use of sets of frameshift polypeptides for the immuno-therapy according to the present invention provides the means for a reliable treatment of degenerative disorders and cancers associated with frameshift mutations in coding microsatellites reducing the risk of escape of several tumor cells or of a population of tumor cells from being addressed by the therapy. Thus the method of the invention reduces the risk of recurrence of tumors after immuno-therapy employing CTLs, T-helper cells and possibly specific antibody producing B-cells raised against frameshift polypeptides characteristic for tumor cells. The present invention furthermore provides compositions and methods for enhanced diagnosis and therapy of disorders associated with MSI.sup.+ related occurrence of frameshift peptides. The invention provides new frameshift polypeptides for diagnosis therapy of said disorders, that may be used each alone or in combinations tailored, to address a wide range of different types of disorders in an organism and may thus be employed as a preventive vaccine against said disorders.
[0133] The following examples are given for illustration of the invention only and are not intended to limit the scope of the invention.
EXAMPLES
Example 1: Analysis of the Mutation Frequency of Genes Harbouring Repeat Tracts
[0134] Investigations were performed regarding the mutation frequencies of unpublished coding microsatellite regions. Nine novel coding microsatellites residing in genes not yet analyzed for frameshift mutations in MSI colorectal, endometrial or gastric tumors have been examined in the course of the studies leading to the present invention. They include three genes containing A11 repeats (TAF1B, MACS, HT001), five genes with A10 repeats (CHD2, UVRAG, TCF6L1, ABCF1, AIM2) and one gene harboring a G9 repeat (ELAVL3). The MSI status of these specimen was determined using the NCI ICG-HNPCC microsatellite reference marker panel (8). PCR reactions were performed as follows:
[0135] Genomic DNA was isolated from 5-8 haematoxylin and eosin stained 5 .mu.m sections after microdissection, using the Qiamp Tissue Kit (Qiagen, Hilden, Germany). Preparation of DNA from cell lines was performed according to standard protocols. PCR primers were designed to closely flank the target sequence, yielding short amplimeres of about 100 base pairs thus allowing precise fragment sizing and robust amplification from archival tissues (Table 1). PCR reactions were performed in a total volume of 25 .mu.l containing 50 ng genomic DNA, 2.5 .mu.l 10.times. reaction buffer (Life Technologies, Karlsruhe, Germany), 1.5 mM MgCl.sub.2, 200 .mu.M dNTPs, 0.3 .mu.M of each primer, and 0.5 U Taq DNA polymerase (Life Technologies) and using the following conditions: initial denaturation at 94.degree. C. for 4 min, followed by 35 cycles of denaturation at 94.degree. C. for 30 s, annealing at 58.degree. C. for 45 s, and primer extension at 72.degree. C. for 30 s. The final extension step was carried out at 72.degree. C. for 6 min. PCR fragments were analyzed on an ALF DNA sequencing device (Amersham Pharmacia Biotech, Freiburg, Germany) using 6.6% polyacrylamide/7 M urea gels. Size, height and profile of microsatellite peaks were analyzed using the AlleleLinks software (Amersham Pharmacia Biotech). Coding microsatellite instability was scored, if smaller or larger-sized amplimeres were detected in tumor DNA compared to DNA from non-neoplastic cells. Allele intensities were determined and ratios of wild-type and novel alleles in normal and tumor tissues were calculated, defining a two-fold difference as threshold for allelic shifts. Similarly, unstable alleles in tumor cell lines were identified by comparison to 36 unmatched normal mucosae. In order to determine the predicted repeat type and length amplified coding microsatellites were subjected to Big Dye terminator cycle sequencing (Perkin Elmer, Darmstadt, Germany) and subsequent analysis on an ABI 310 sequencing device.
[0136] The frequencies of mutations in a particular microsatellite region examined herein are given in Tables 1 and 2. The mutation rates are calculated with respect to the total number of samples included in the study.
TABLE-US-00002 TABLE 1 Coding microsatellite genes investigated in MSI-H colorectal cancer. Repeat: type of nucleotide and length of repeat tract, n: number of samples investigated, mut.: number of samples mutated, %: percentage of mutated samples, gene acc.no. repeat n mut. % HPDMPK Y10936 T14 21 20 95% HT001 AF113539 A11 20 17 85% TGFbIIR D50683 A10 735 602 82% U79260 U79260 T14 21 17 81% PTHL3 M24350 A11 21 17 81% MACS D10522 A11 19 14 74% TAF1B L39061 A11 19 13 68% AC1 D82070 T10 21 14 67% AIM2 AF024714 A10 19 10 53% BAX L22473 G8 538 235 44% SLC23A1 AF058319 C9 21 9 43% ABCF1 AF027302 A10 19 8 42% TCF-4 Y11306 A9 248 98 40% Caspase 5 U28015 A10 120 47 39% TCF6L1 M85079 A10 18 7 39% FLT3LG U29874 C9 21 8 38% MSH3 J04810 A8 596 223 37% ELAVL3 D26158 G9 19 7 37% MAC30X L19183 A10 21 7 33% UVRAG X99050 A10 18 6 33% SLC4A3 U05596 C9 21 7 33% GRB-14 L76687 A9 57 18 32% RIZ U17838 A9 83 23 28% MBD4/MED1 AF072250 A10 83 22 27% RAD50 U63139 A9 109 28 26% MSH6 U54777 C8 684 169 25% IGFIIR Y00285 G8 423 90 21% Axin2 AF205888 G7 45 9 20% GART X54199 A10 21 4 19% Bcl-10 AF082283 A8 32 6 19% RHAMM U29343 A9 57 9 16% PTEN U92436 A6 32 5 16% OGT U77413 T10 78 10 13% BLM U39817 A9 170 19 11% Fas X63717 T7 30 3 10% Apaf-1 AF013263 A8 43 4 9% MLH3 AF195657 A9 99 9 9% CBF M37197 A9 57 5 9% HTP1 AB024582 A9 57 5 9% RECQL L36140 A9 68 5 7% RBBP8 U72066 A9 70 5 7% MLH3 AF195657 A8 123 7 6% PTEN U92436 A6 32 2 6% CHD2 AF006514 A10 19 1 5% ATRmRNA U76308 A10 77 4 5% INPPL1/DRP L24444 C7 82 4 5% CHK1 AF016582 A9 21 1 5% SYCP1 X95654 A10 71 3 4% RIZ U17838 A8 83 3 4% ANG2 AF004327 A9 57 2 4% KKIAMRE/ U35146 A9 57 2 4% CDKL2 ATM U82828 T7 39 1 3% CDX2 Y13709 G7 45 1 2% Axin2 AF205888 A6 45 1 2% BRCA1 U14680 A8 92 2 2% Doc-1 U53445 A9 57 1 2% BRCA2 U43746 A8 119 2 2% RFC3 L07541 A10 76 1 1% Casp8AP2/ AF154415 A9 13 0 0% FLASH ERCC5/XPG D16305 A9 13 0 0% HUMGPRKLG L03718 A9 57 0 0% DP2 U18422 A9 57 0 0% PMS2 U14658 A8 133 0 0% Caspase 1/ M87507 A8 42 0 0% ICE WRN L76937 A8 11 0 0% POLA X06745 A8 83 0 0% NSEP M85234 C8 132 0 0% SHC1 U73377 G8 11 0 0% NBS1 AF058696 A7 39 0 0% BRCA2 X95152 T6 31 0 0%
TABLE-US-00003 TABLE 2 Coding microsatellite genes investigated in MSI-H gastric cancer. Repeat: type of nucleotide and length of repeat tract, n: number of samples investigated, mut.: number of samples mutated, %: percentage of mutated samples gene acc.no. repeat n mut. % HPDMPK Y10936 T14 15 15 100% TAF1B L39061 A11 15 13 87% PTHL3 M24350 A11 15 11 73% MACS D10522 A11 15 9 60% TGFbIIR M85079 A10 227 122 54% HT001 AF113539 A11 15 8 53% MBD4/MED1 AF072250 A10 15 7 47% RIZ U17838 A9 51 23 45% Caspase 5 U28015 A10 25 11 44% AIM2 AF024714 A10 15 6 40% OGT U77413 T10 15 6 40% SLC23A1 AF058319 C9 15 6 40% BAX L22473 G8 208 72 35% MSH6 U54777 C8 224 76 34% ABCF1 AF027302 A10 15 5 33% FLT3LG U29874 C9 15 5 33% MSH3 J04810 A8 202 65 32% RAD50 Z75311 A9 36 10 28% PRKDC U63630 A10 30 8 27% SLC4A3 U05596 C9 15 4 27% BLM U39817 A9 36 9 25% ATRmRNA U76308 A10 18 4 22% B2M AB021288 A5 28 6 21% MAC30X L19183 A10 15 3 20% RFC3 L07541 A10 15 3 20% UVRAG X99050 A10 15 3 20% AC1 D82070 T10 15 3 20% IGFIIR Y00285 G8 202 36 18% Apaf-1 AF013263 A8 20 3 15% TCF-4 Y11306 A9 23 3 13% SYCP1 X95654 A10 40 4 10% Bcl-10 AF082283 A8 20 2 10% Fas X63717 T7 20 2 10% U79260 U79260 T14 15 1 7% GART X54199 A10 15 1 7% TCF6L1 M85079 A10 15 1 7% ELAVL3 D26158 G9 15 1 7% ATM U82828 T7 36 2 6% BRCA1 U14680 A8 64 3 5% INPPL1/DRP L24444 C7 25 1 4% RIZ U17838 A8 51 1 2% CHD2 AF006514 A10 15 0 0% CHK1 AF016582 A9 15 0 0% BRCA2 U43746 A8 68 0 0% PMS2 U14658 A8 30 0 0% NSEP M85234 C8 50 0 0% NBS1 AF058696 A7 36 0 0%
[0137] The results presented in Tables 1 and 2 show, that the tested microsatellite regions are frequently mutated in tumor samples.
Example 2: Detection of the Expression of Frameshift Mutated mRNA from Genes Harbouring Coding Microsatellite Regions Using PCR
[0138] Samples of colon, gastric and endometrial carcinomas are used to determine the expression of mRNA showing frameshift mutations in coding microsatellite regions using PCR and subsequent sequencing of the amplified nucleic acid products.
[0139] Tumors are collected, snap frozen, and stored at -80.degree. C. They are verified to be composed predominantly of neoplastic cells by histopathological analysis. mRNA is isolated from tumors using Qiagen reagents (Qiagen, Hilden, Germany), and single-stranded cDNA is synthesized using Superscript II (Life Technologies, Inc.).
[0140] PCR reactions were performed in a total volume of 25 .mu.l containing 50 ng cDNA, 2.5 .mu.l 10.times. reaction buffer (Life Technologies, Karlsruhe, Germany), 1.5 mM MgCl.sub.2, 200 .mu.M dNTPs, 0.3 .mu.M of each primer, and 0.5 U Taq DNA polymerase (Life Technologies) and using the following conditions: initial denaturation at 94.degree. C. for 4 min, followed by 35 cycles of denaturation at 94.degree. C. for 30 s, annealing at 58.degree. C. for 45 s, and primer extension at 72.degree. C. for 30 s. The final extension step was carried out at 72.degree. C. for 6 min. PCR fragments were analyzed on an ALF DNA sequencing device (Amersham Pharmacia Biotech, Freiburg, Germany) using 6.6% polyacrylamide/7 M urea gels.
[0141] The experiments described show, that in the cases of the tested genes CHD2, UVRAG, ELAVL3, TCF6L1, ABCF1, AIM2, TAF1B, MACS and HT001 mutated coding microsatellite regions are transcribed into mRNA.
[0142] These results indicate, that the cells harbouring mutations in coding microsatellite regions of the nine genes tested express neo-polypeptides derived from these frameshift mutations.
Example 3: Stimulation of Cellular Immune Response by Frameshift Peptides
[0143] The present experiments were performed in order to determine, whether the frameshift peptides arising from mutations in coding microsatellite regions according to the present invention are suited to stimulate a cellular immune response. The experiments were performed as follows:
[0144] Peptides displaying HLA-A2.1-binding motifs were selected by taking advantage of specific computer programs [(Parker, Bednarek, & Coligan 1994); bimas.dcrt.nih.gov/molbio/hla_bind/and (Rammensee et al. 1999); 134.2.96.221/scripts/MHCServer.dll/home.htm].
TABLE-US-00004 TABLE 3 Frameshift Peptides analyzed for in vitro stimulation of a cellular immune response. All analyzed peptides (SEQ ID NOs: 75-106, as listed in Table 3 in order) are derived from (-1) mutations in microsatellites of the cognate proteins; the protein or nucleotide accession numbers are indicated within the table; the position of the start amino acid in the protein is indicated in the tables; the predicted binding scores to HLA-A2.1 using computer assisted analysis; Accession Theoretical Scores Protein Number Name Peptide Ken Parker SYFPEITHI TGF-betaRII (-1) AAA61164 FSP01 .sup.128-SLVRLSSCV 70 23 TGF-betaRII (-1) AAA61164 FSP02 .sup.131-RLSSCVPVA 5 19 TGF-betaRII (-1) AAA61164 FSP03 .sup.135-CVPVALMSA 1 14 HPDMPK (-1) CAA71862 FSP04 .sup.136-LLHSAPTPSL 36 25 HPDMPK (-1) CAA71862 FSP05 .sup.129-FLSASHFLL 570 21 HPDMPK (-1) CAA71862 FSP07 .sup.125-RVFFFYQHL 39 15 OGT (-1) AAB63466 FSP06 .sup.128-SLYKFSPFPL 397 23 D070(-1) BAA11534 FSP08 .sup.35-KIFTFFFQL 1593 21 D070 (-1) BAA11534 FSP09 .sup.68-ALLPAGPLT 28 21 D070 (-1) BAA11534 FSP10 .sup.69-LLPAGPLTQT 29 20 U79260 (-1) AAB50206 FSP11 .sup.59-TLSPGWSAV 118 25 U79260 (-1) AAB50206 FSP12 .sup.83-ILLPQPPEWL 362 26 Sec63 (-1) AAC83375 FSP13 .sup.551-RQMESLGMKL 33 15 MAC30X (-1) AAA16188 FSP14 .sup.198-VEMPTGWLL 20 14 MAC30X (-1) AAA16188 FSP15 .sup.198-VEMPTGWLLV 14 15 FLT3L (-1) U29874 FSP16 .sup.113-FQPPPAVFA 13 10 MSH-3 (-1) AAB47281 FSP17 .sup.389-ALWECSLPQA 389 24 MSH-3 (-1) AAB47281 FSP18 .sup.386-FLLALWECSL 364 25 MSH-3 (-1) AAB47281 FSP19 .sup.387-LLALWECSL 36 26 MSH-3 (-1) AAB47281 FSP20 .sup.394-SLPQARLCL 21 23 MSH-3 (-1) AAB47281 FSP21 .sup.402-LIVSRTLLL 5 23 MSH-3 (-1) AAB47281 FSP22 .sup.401-CLIVSRTLL 21 22 MSH-3 (-1) AAB47281 FSP23 .sup.403-IVSRTLLLV 24 21 MSH-3 (-1) AAB47281 FSP24 .sup.382-KRATFLLAL 0.1 20 Caspase-5 (-1) U28015 FSP25 .sup.61-KMFFMVFLI 1301 20 Caspase-5 (-1) U28015 FSP26 .sup.67-FLIIWQNTM 22.85 21 TAF-1b (-1) L39061 FSP27 .sup.108-GMCVKVSSI 17 24 HT001 (-1) NP 054784 FSP30 .sup.281-VLRTEGEPL n.d. 21 MSH-3 (-1) AAB47281 FSP31 .sup.402-LIVSRTLLLV 37 25 MSH-3 (-1) AAB47281 FSP32 .sup.394-SLPQARLCLI 24 24 MSH-3 (-1) AAB47281 FSP33 .sup.401-CLIVSRTLLL 21 23 MSH-3 (-1) AAB47281 FSP34 .sup.399-RLCLIVSRTL 4 22
[0145] Peptides were purchased from the peptide synthesis unit of the DKFZ. Stock solutions (10 mg/ml in DMSO) were stored at -70.degree. C. and diluted to 1 mg/ml in PBS before use. T2 cells were pulsed with 50 .mu.g/ml peptide and 5 .mu.g/ml 2-microglobulin (Sigma; Deisenhofen, Germany) overnight at 37.degree. C. The expression of HLA-A2.1 was then analyzed by flow cytometry using mAb BB7.2 followed by incubation with FITC-conjugated (ab')2 goat anti-mouse Ig (Vonderheide et al. 1999).
[0146] Peripheral blood was obtained from a healthy HLA-A2.1+ donor and collected in heparinized tubes. PBMNC were isolated by Ficoll-density gradient centrifugation. Whole CD3+ T-cells were isolated from PBMNC by magnetic depletion of non-T-cells using the MACS Pan T-cell Isolation Kit (Miltenyi; Bergisch Gladbach, Germany) according to manufacturer's instructions. Preparations contained at least 97% of CD3+ cells as assessed by immunophenotypic analysis.
[0147] HLA-A2.1-restricted peptides were FSP27 and FSP29 from a (-1) in the TAF1B-gene; FSP30 was derived from a (-1) mutation in the HT001 gene.
[0148] CD40 Bs of a HLA-A2.1+ donor were incubated with peptide (10 .mu.g/ml) and human 2-microglobulin (3 .mu.g/ml; Sigma) in serum-free Iscov's DMEM medium for one hour at room temperature, washed twice to remove excess of peptide, were irradiated (30Gy) and added to purified CD3+ autologous T-cells (>97% CD3+) at a ratio of 4:1 (T:CD40 Bs) in Iscov's MEM containing 10% human AB-serum, supplements (1:100) and hIL-7 (10 ng/ml, R&D). Cells were plated at a density of 2.times.106 T-cells/well in 1 ml of medium. After three days in culture they were fed with 1 ml complete medium. For restimulation of T-cells, this was repeated weekly. IL-2 was first given at day 21 (10 IU/ml, R&D), also at day 24 and from day 28 on only hIL-2 was used instead of hIL7.
[0149] ELISpot assays were performed as described elsewhere (Meyer et al. 1998). Briefly, nitrocellulose-96-well plates (Multiscreen; Millipore, Bedford, USA) were covered with mouse anti-human IFN-g monoclonal antibody (Mabtech, Sweden) and blocked with serum containing medium. Varying numbers of effector cells were plated in triplicates with 3.5.times.104 peptide-loaded T2 cells per well as targets. After incubation for 18 h, plates were washed, incubated with biotinylated rabbit anti-human IFN-g second antibody, washed again, incubated with streptavidin coupled alkaline phosphatase, followed by a final wash. Spots were detected by incubation with NBT/BCIP (Sigma) for 45 min, reaction was stopped with water, after drying spots were counted using the KS-ELISpot reader (Zeiss Kontron; Gottingen, Germany).
[0150] The analysis shows, that the used peptides are suited to raise an immune response. Peptides arising from frameshift mutations thus may be used to raise immune response for example in the course of vaccinations according to the present invention.
Example 4: Screening for Antibodies Directed Against Frameshift Peptides in Patient Samples
[0151] Serum of 25 patients with diagnosed colorectal carcinomas was tested for the presence of antibodies to a set of frameshift peptides arising from frameshift mutations in coding microsatellite regions of the following genes: CHD2, UVRAG, ELAVL3, TCF6L1, ABCF1, AIM2, TAF1B, MACS and HT001. As a control the serum of 50 normal individuals was tested.
[0152] For the test synthetic peptides representing immunogenic portions of all relevant frameshift peptides (see FIGS. 2-1 to 2-8) arising from the respective genes were spotted onto nylon membranes. The nylon membranes were subsequently incubated for one hour in phosphate-buffered saline (PBS) with 5% milk powder for blocking unspecific membrane binding. After washing the membranes 3.times. with PBS, the membranes were incubated with the test and control sera. The sera were diluted 1:1.000 in PBS/0,5% milk powder and incubated overnight with gentle shaking. Subsequently the sera were removed, and membranes were washed three times in PBS before they were incubated with a polyclonal alkaline phosphatase conjugated goat anti-human IgG antibody for one hour. Thereafter, the membranes were washed repeatedly with PBS/0,05% TWEEN20 before staining reaction was developed using nitroblue tetrazolium chloride and bromochoro-indoyl-phosphate (SigmaAldrich) in Tris-buffered saline (TBS). Binding of human antibodies specific for individual frameshift polypeptides thus was made visible by color-deposit on the respective membrane.
[0153] The results show, that in all samples of tumor patients antibodies directed against at least one peptide arising from frameshift mutations were present.
[0154] This illustrates, that the method according to the present invention may be used for diagnosis of diseases associated with frameshift mutations in coding regions of genes.
Example 5: In Vitro Stimulation of Cellular Immune Response by Frameshift Peptides
[0155] The present experiments were performed in order to determine, whether the frameshift peptides arising from mutations in coding microsatellite regions according to the present invention are suited to stimulate a cellular immune response. The experiments were performed as follows:
[0156] Peptides displaying HLA-A2.1-binding motifs were selected by taking advantage of specific computer programs [(Parker, Bednarek, & Coligan 1994); bimas.dcrt.nih.gov/molbio/hla_bind/and (Rammensee et al. 1999); 134.2.96.221/scripts/MHCServer.dll/home.htm]. Peptides were purchased from the peptide synthesis unit of the DKFZ. Stock solutions (10 mg/ml in DMSO) were stored at -70.degree. C. and diluted to 1 mg/ml in PBS before use. T2 cells were pulsed with 50 .mu.g/ml peptide and 5 .mu.g/ml 2-microglobulin (Sigma; Deisenhofen, Germany) overnight at 37.degree. C. The expression of HLA-A2.1 was then analyzed by flow cytometry using mAb BB7.2 followed by incubation with FITC-conjugated (ab')2 goat anti-mouse Ig (Vonderheide et al. 1999).
[0157] Peripheral blood was obtained from a healthy HLA-A2.1+ donor and collected in heparinized tubes. PBMNC were isolated by Ficoll-density gradient centrifugation. Whole CD3+ T-cells were isolated from PBMNC by magnetic depletion of non-T-cells using the MACS Pan T-Cell Isolation Kit (Miltenyi; Bergisch Gladbach, Germany) according to manufacturer's instructions. Preparations contained at least 97% of CD3+ cells as assessed by immunophenotypic analysis.
[0158] CD40 Bs of a HLA-A2.1+ donor were incubated with peptide (10 .mu.g/ml) and human 2-microglobulin (3 .mu.g/ml; Sigma) in serum-free Iscov's DMEM medium for one hour at room temperature, washed twice to remove excess of peptide, were irradiated (30Gy) and added to purified CD3+ autologous T-cells (>97% CD3+) at a ratio of 4:1 (T:CD40 Bs) in Iscov's MEM containing 10% human AB-serum, supplements (1:100) and hIL-7 (10 ng/ml, R&D). Cells were plated at a density of 2.times.10.sup.6 T-cells/well in 1 ml of medium. After three days in culture they were fed with 1 ml complete medium. For restimulation of T-cells, this was repeated weekly. IL-2 was first given at day 21 (10 IU/ml, R&D), also at day 24 and from day 28 on only hIL-2 was used instead of hIL7.
[0159] ELISpot assays were performed as described elsewhere (Meyer et al. 1998). Briefly, nitrocellulose-96-well plates (Multiscreen; Millipore, Bedford, USA) were covered with mouse anti-human IFN-g monoclonal antibody (Mabtech, Sweden) and blocked with serum containing medium. Varying numbers of effector cells were plated in triplicates with 3.5.times.10.sup.4 peptide-loaded T2 cells per well as targets. After incubation for 18 h, plates were washed, incubated with biotinylated rabbit anti-human IFN-g second antibody, washed again, incubated with streptavidin coupled alkaline phosphatase, followed by a final wash. Spots were detected by incubation with NBT/BCIP (Sigma) for 45 min, reaction was stopped with water, after drying spots were counted using the KS-ELISpot reader (Zeiss Kontron; Gottingen, Germany).
[0160] These procedures were performed for peptides derived from mutations in the coding regions of the following genes: TGF.beta.RII, OGT, U79260, CASP 5, MSH 3, HPDMPK, HT001, TAF1B, D070, MAC30X, FLT3L and SEC63. Peptides are listed in FIGS. 2-1 to 2-8. Results for ELIspot analysis is shown in FIGS. 1-1 to 1-2.
[0161] The analysis shows, that the used peptides are suited to raise an immune response. Peptides arising from frameshift mutations thus may be used to raise immune response for example in the course of vaccinations according to the present invention.
Example 6: Cytotoxicity Assay Directed Against Cells Displaying Frameshift Peptides
[0162] CTL bulk cultures and/or CTL clones obtained according to the method described in Example 1 were tested for their cytotoxicity as follows:
[0163] Due to the limited amount of cell material clones were in some experiments pooled for the determination of the cytotoxicity.
[0164] To obtain cells presenting frameshift peptides on the one hand different MSI+ cell lines endogenously expressing mutated mRNA of the respective frameshift peptides of TGWU, OGT, U79260, CASP 5, MSH 3, HPDMPK, HT001, TAF1B, D070, MAC30X, FLT3L and SEC63 either expressed HLA-A2.1 endogenously or were stably transfected with HLA-A2.1 on the other hand several MSI- cell lines expressing HLA-A2.1 were transfected with the mutated full-length cDNA of the respective frameshift peptides (of TGWU, OGT, U79260, CASP 5, MSH 3, HPDMPK, HT001, TAF1B, D070, MAC30X, FLT3L and SEC63). After selection and expansion of the transfected cell lines for each respective frameshift peptide at least two stably transfected sub-cell lines were available. These cell lines were used in cytotoxicity assays, wherein negative controls were the respective untransfected MSI+ HLA-A2.1 negative and/or the MSI-, HLA-A2.1 positive cell lines.
[0165] It could be shown, that the transfected cell lines were lysed by the bulk cultures and/or pooled clones of CTLs. The reactivity was tested at different target cell to effector cell ratios. In average around 20%-30% of the target cells were lysed in the assays. The control cells were always lysed at a significantly lower percentage.
[0166] In FIGS. 3 and 4 results for the frameshift peptides FSP02 (TGF.beta.RII(-1)) and FSP06 (OGT(-1)) respectively are shown. These results shall be representative for the results related to the other frameshift peptides, which rendered similar rates of lysis.
[0167] The experiments show, that frameshift peptides may generate immune response. The frameshift peptides may furthermore be applied for the detection of the presence of cytotoxic T-cells directed against a particular frameshift peptide.
Example 7: Screening for Antibodies Directed Against Frameshift Peptides in Patient Samples
[0168] Serum of 25 patients with diagnosed colorectal carcinomas was tested for the presence of antibodies to a set of frameshift peptides arising from frameshift mutations in coding microsatellite regions of the following genes: TGWU, U79260, CASP 5, HT001, PTHL3, MACS, TCF4, TAF1B, AC1, AIM2, SLC23A1, ABCF1, HSPC259, BAX, TCF6L1, FTL3L, OGT, ELAVL3, MAC30X, MAC30X, SLC4A3, PRKDC, UVRAG, MSH3 and SEC63. As a control the serum of 50 normal individuals was tested.
[0169] For the test synthetic peptides (20 to 40 mers, partly overlapping) representing immunogenic portions of all relevant frameshift peptides (see FIGS. 2-1 to 2-8) arising from the respective genes were spotted onto nylon membranes. The nylon membranes were subsequently incubated for one hour in phosphate-buffered saline (PBS) with 5% milk powder for blocking unspecific membrane binding. After washing the membranes 3.times. with PBS, the membranes were incubated with the test and control sera. The sera were diluted 1:1.000 in PBS/0,5% milk powder and incubated overnight with gentle shaking. Subsequently the sera were removed, and membranes were washed three times in PBS before they were incubated with a polyclonal alkaline phosphatase conjugated goat anti-human IgG antibody for one hour. Thereafter, the membranes were washed repeatedly with PBS/0,05% TWEEN20 before staining reaction was developed using nitroblue tetrazolium chloride and bromochloro-indoyl-phosphate (SigmaAldrich) in Tris-buffered saline (TBS). Binding of human antibodies specific for individual frameshift polypeptides thus was made visible by color-deposit on the respective membrane.
[0170] The results show, that in all samples of tumor patients antibodies directed against at least one peptide arising from frameshift mutations were present.
[0171] This illustrates, that the method according to the present invention may be used for diagnosis of diseases associated with frameshift mutations in coding regions of genes.
Sequence CWU
1
1
1201320PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 1Met Gln Arg
Pro Asn Ala His Arg Ile Ser Gln Pro Ile Arg Gln Ile1 5
10 15Ile Tyr Gly Leu Leu Leu Asn Ala Ser
Pro His Leu Asp Lys Thr Ser 20 25
30Trp Asn Ala Leu Pro Pro Gln Pro Leu Ala Phe Ser Glu Val Glu Arg
35 40 45Ile Asn Lys Asn Ile Arg Thr
Ser Ile Ile Asp Ala Val Glu Leu Ala 50 55
60Lys Asp His Ser Asp Leu Ser Arg Leu Thr Glu Leu Ser Leu Arg Arg65
70 75 80Arg Gln Met Leu
Leu Leu Glu Thr Leu Lys Val Lys Gln Thr Ile Leu 85
90 95Glu Pro Ile Pro Thr Ser Leu Lys Leu Pro
Ile Ala Val Ser Cys Tyr 100 105
110Trp Leu Gln His Thr Glu Thr Lys Ala Lys Leu His His Leu Gln Ser
115 120 125Leu Leu Leu Thr Met Leu Val
Gly Pro Leu Ile Ala Ile Ile Asn Ser 130 135
140Pro Gly Lys Glu Glu Leu Gln Glu Asp Gly Ala Lys Met Leu Tyr
Ala145 150 155 160Glu Phe
Gln Arg Val Lys Ala Gln Thr Arg Leu Gly Thr Arg Leu Asp
165 170 175Leu Asp Thr Ala His Ile Phe
Cys Gln Trp Gln Ser Cys Leu Gln Met 180 185
190Gly Met Tyr Leu Asn Gln Leu Leu Ser Thr Pro Leu Pro Glu
Pro Asp 195 200 205Leu Thr Arg Leu
Tyr Ser Gly Ser Leu Val His Gly Leu Cys Gln Gln 210
215 220Leu Leu Ala Ser Thr Ser Val Glu Ser Leu Leu Ser
Ile Cys Pro Glu225 230 235
240Ala Lys Gln Leu Tyr Glu Tyr Leu Phe Asn Ala Thr Arg Ser Tyr Ala
245 250 255Pro Ala Glu Ile Phe
Leu Pro Lys Gly Arg Ser Asn Ser Lys Lys Lys 260
265 270Arg Gln Lys Lys Gln Asn Thr Ser Cys Ser Lys Asn
Arg Gly Arg Thr 275 280 285Thr Ala
His Thr Lys Cys Trp Tyr Glu Gly Asn Asn Arg Phe Gly Leu 290
295 300Leu Met Val Glu Asn Leu Glu Glu His Ser Glu
Ala Ser Asn Ile Glu305 310 315
3202304PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 2Met Gln Arg
Pro Asn Ala His Arg Ile Ser Gln Pro Ile Arg Gln Ile1 5
10 15Ile Tyr Gly Leu Leu Leu Asn Ala Ser
Pro His Leu Asp Lys Thr Ser 20 25
30Trp Asn Ala Leu Pro Pro Gln Pro Leu Ala Phe Ser Glu Val Glu Arg
35 40 45Ile Asn Lys Asn Ile Arg Thr
Ser Ile Ile Asp Ala Val Glu Leu Ala 50 55
60Lys Asp His Ser Asp Leu Ser Arg Leu Thr Glu Leu Ser Leu Arg Arg65
70 75 80Arg Gln Met Leu
Leu Leu Glu Thr Leu Lys Val Lys Gln Thr Ile Leu 85
90 95Glu Pro Ile Pro Thr Ser Leu Lys Leu Pro
Ile Ala Val Ser Cys Tyr 100 105
110Trp Leu Gln His Thr Glu Thr Lys Ala Lys Leu His His Leu Gln Ser
115 120 125Leu Leu Leu Thr Met Leu Val
Gly Pro Leu Ile Ala Ile Ile Asn Ser 130 135
140Pro Gly Lys Glu Glu Leu Gln Glu Asp Gly Ala Lys Met Leu Tyr
Ala145 150 155 160Glu Phe
Gln Arg Val Lys Ala Gln Thr Arg Leu Gly Thr Arg Leu Asp
165 170 175Leu Asp Thr Ala His Ile Phe
Cys Gln Trp Gln Ser Cys Leu Gln Met 180 185
190Gly Met Tyr Leu Asn Gln Leu Leu Ser Thr Pro Leu Pro Glu
Pro Asp 195 200 205Leu Thr Arg Leu
Tyr Ser Gly Ser Leu Val His Gly Leu Cys Gln Gln 210
215 220Leu Leu Ala Ser Thr Ser Val Glu Ser Leu Leu Ser
Ile Cys Pro Glu225 230 235
240Ala Lys Gln Leu Tyr Glu Tyr Leu Phe Asn Ala Thr Arg Ser Tyr Ala
245 250 255Pro Ala Glu Ile Phe
Leu Pro Lys Gly Arg Ser Asn Ser Lys Lys Lys 260
265 270Gly Arg Arg Asn Arg Ile Pro Ala Val Leu Arg Thr
Glu Gly Glu Pro 275 280 285Leu His
Thr Pro Ser Val Gly Met Arg Glu Thr Thr Gly Leu Gly Cys 290
295 3003282PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 3Met Gln Arg Pro Asn Ala His Arg Ile Ser Gln Pro Ile Arg
Gln Ile1 5 10 15Ile Tyr
Gly Leu Leu Leu Asn Ala Ser Pro His Leu Asp Lys Thr Ser 20
25 30Trp Asn Ala Leu Pro Pro Gln Pro Leu
Ala Phe Ser Glu Val Glu Arg 35 40
45Ile Asn Lys Asn Ile Arg Thr Ser Ile Ile Asp Ala Val Glu Leu Ala 50
55 60Lys Asp His Ser Asp Leu Ser Arg Leu
Thr Glu Leu Ser Leu Arg Arg65 70 75
80Arg Gln Met Leu Leu Leu Glu Thr Leu Lys Val Lys Gln Thr
Ile Leu 85 90 95Glu Pro
Ile Pro Thr Ser Leu Lys Leu Pro Ile Ala Val Ser Cys Tyr 100
105 110Trp Leu Gln His Thr Glu Thr Lys Ala
Lys Leu His His Leu Gln Ser 115 120
125Leu Leu Leu Thr Met Leu Val Gly Pro Leu Ile Ala Ile Ile Asn Ser
130 135 140Pro Gly Lys Glu Glu Leu Gln
Glu Asp Gly Ala Lys Met Leu Tyr Ala145 150
155 160Glu Phe Gln Arg Val Lys Ala Gln Thr Arg Leu Gly
Thr Arg Leu Asp 165 170
175Leu Asp Thr Ala His Ile Phe Cys Gln Trp Gln Ser Cys Leu Gln Met
180 185 190Gly Met Tyr Leu Asn Gln
Leu Leu Ser Thr Pro Leu Pro Glu Pro Asp 195 200
205Leu Thr Arg Leu Tyr Ser Gly Ser Leu Val His Gly Leu Cys
Gln Gln 210 215 220Leu Leu Ala Ser Thr
Ser Val Glu Ser Leu Leu Ser Ile Cys Pro Glu225 230
235 240Ala Lys Gln Leu Tyr Glu Tyr Leu Phe Asn
Ala Thr Arg Ser Tyr Ala 245 250
255Pro Ala Glu Ile Phe Leu Pro Lys Gly Arg Ser Asn Ser Lys Lys Lys
260 265 270Lys Ala Glu Glu Thr
Glu Tyr Gln Leu Phe 275 2804139PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 4Met Gly His Pro Arg Ala Ile Gln Pro
Ser Val Phe Phe Ser Pro Tyr1 5 10
15Asp Val His Phe Leu Leu Tyr Pro Ile Arg Cys Pro Tyr Leu Lys
Ile 20 25 30Gly Arg Phe His
Ile Lys Leu Lys Gly Leu His Phe Leu Phe Ser Phe 35
40 45Leu Phe Phe Phe Phe Glu Thr Gln Ser His Ser Val
Thr Arg Leu Glu 50 55 60Cys Ser Gly
Thr Ile Ser Ala His Cys Asn Leu Cys Leu Pro Gly Ser65 70
75 80Ser Asn Ser Pro Ala Ser Ala Ser
Arg Val Ala Gly Thr Ala Gly Thr 85 90
95Cys Arg Arg Ala Gln Leu Ile Phe Val Phe Leu Ala Glu Met
Gly Phe 100 105 110His His Val
Gly Arg Asp Gly Leu Asp Leu Asn Leu Val Ile His Pro 115
120 125Pro Arg Ser Pro Lys Ala Leu Gly Leu Gln Ala
130 1355101PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 5Met Gly His Pro Arg Ala Ile Gln Pro Ser Val Phe Phe Ser
Pro Tyr1 5 10 15Asp Val
His Phe Leu Leu Tyr Pro Ile Arg Cys Pro Tyr Leu Lys Ile 20
25 30Gly Arg Phe His Ile Lys Leu Lys Gly
Leu His Phe Leu Phe Ser Phe 35 40
45Leu Phe Phe Phe Leu Arg His Ser Leu Thr Leu Ser Pro Gly Trp Ser 50
55 60Ala Val Ala Arg Ser Arg Leu Thr Ala
Thr Ser Ala Ser Gln Val Gln65 70 75
80Val Ile Leu Leu Pro Gln Pro Pro Glu Trp Leu Gly Leu Gln
Ala Arg 85 90 95Ala Ala
Ala Pro Ser 100653PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 6Met Gly His Pro Arg Ala Ile Gln Pro Ser Val Phe Phe Ser
Pro Tyr1 5 10 15Asp Val
His Phe Leu Leu Tyr Pro Ile Arg Cys Pro Tyr Leu Lys Ile 20
25 30Gly Arg Phe His Ile Lys Leu Lys Gly
Leu His Phe Leu Phe Ser Phe 35 40
45Leu Phe Phe Phe Phe 507209PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 7Met Gln Arg Arg Leu Val Gln Gln Trp Ser Val Ala Val Phe
Leu Leu1 5 10 15Ser Tyr
Ala Val Pro Ser Cys Gly Arg Ser Val Glu Gly Leu Ser Arg 20
25 30Arg Leu Lys Arg Ala Val Ser Glu His
Gln Leu Leu His Asp Lys Gly 35 40
45Lys Ser Ile Gln Asp Leu Arg Arg Arg Phe Phe Leu His His Leu Ile 50
55 60Ala Glu Ile His Thr Ala Glu Ile Arg
Ala Thr Ser Glu Val Ser Pro65 70 75
80Asn Ser Lys Pro Ser Pro Asn Thr Lys Asn His Pro Val Arg
Phe Gly 85 90 95Ser Asp
Asp Glu Gly Arg Tyr Leu Thr Gln Glu Thr Asn Lys Val Glu 100
105 110Thr Tyr Lys Glu Gln Pro Leu Lys Thr
Pro Gly Lys Lys Lys Lys Gly 115 120
125Lys Pro Gly Lys Arg Lys Glu Gln Glu Lys Lys Lys Arg Arg Thr Arg
130 135 140Ser Ala Trp Leu Asp Ser Gly
Val Thr Gly Ser Gly Leu Glu Gly Asp145 150
155 160His Leu Ser Asp Thr Ser Thr Thr Ser Leu Glu Leu
Asp Ser Arg Thr 165 170
175Ala Leu Leu Trp Gly Leu Lys Lys Lys Lys Glu Asn Asn Arg Arg Thr
180 185 190His His Met Gln Leu Met
Ile Ser Leu Phe Lys Ser Pro Leu Leu Leu 195 200
205Leu8196PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
8Met Gln Arg Arg Leu Val Gln Gln Trp Ser Val Ala Val Phe Leu Leu1
5 10 15Ser Tyr Ala Val Pro Ser
Cys Gly Arg Ser Val Glu Gly Leu Ser Arg 20 25
30Arg Leu Lys Arg Ala Val Ser Glu His Gln Leu Leu His
Asp Lys Gly 35 40 45Lys Ser Ile
Gln Asp Leu Arg Arg Arg Phe Phe Leu His His Leu Ile 50
55 60Ala Glu Ile His Thr Ala Glu Ile Arg Ala Thr Ser
Glu Val Ser Pro65 70 75
80Asn Ser Lys Pro Ser Pro Asn Thr Lys Asn His Pro Val Arg Phe Gly
85 90 95Ser Asp Asp Glu Gly Arg
Tyr Leu Thr Gln Glu Thr Asn Lys Val Glu 100
105 110Thr Tyr Lys Glu Gln Pro Leu Lys Thr Pro Gly Lys
Lys Lys Lys Gly 115 120 125Lys Pro
Gly Lys Arg Lys Glu Gln Glu Lys Lys Lys Arg Arg Thr Arg 130
135 140Ser Ala Trp Leu Asp Ser Gly Val Thr Gly Ser
Gly Leu Glu Gly Asp145 150 155
160His Leu Ser Asp Thr Ser Thr Thr Ser Leu Glu Leu Asp Ser Arg Thr
165 170 175Ala Leu Leu Trp
Gly Leu Lys Lys Lys Arg Lys Thr Thr Glu Glu His 180
185 190Ile Ile Cys Asn 1959202PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 9Met Gln Arg Arg Leu Val Gln Gln Trp
Ser Val Ala Val Phe Leu Leu1 5 10
15Ser Tyr Ala Val Pro Ser Cys Gly Arg Ser Val Glu Gly Leu Ser
Arg 20 25 30Arg Leu Lys Arg
Ala Val Ser Glu His Gln Leu Leu His Asp Lys Gly 35
40 45Lys Ser Ile Gln Asp Leu Arg Arg Arg Phe Phe Leu
His His Leu Ile 50 55 60Ala Glu Ile
His Thr Ala Glu Ile Arg Ala Thr Ser Glu Val Ser Pro65 70
75 80Asn Ser Lys Pro Ser Pro Asn Thr
Lys Asn His Pro Val Arg Phe Gly 85 90
95Ser Asp Asp Glu Gly Arg Tyr Leu Thr Gln Glu Thr Asn Lys
Val Glu 100 105 110Thr Tyr Lys
Glu Gln Pro Leu Lys Thr Pro Gly Lys Lys Lys Lys Gly 115
120 125Lys Pro Gly Lys Arg Lys Glu Gln Glu Lys Lys
Lys Arg Arg Thr Arg 130 135 140Ser Ala
Trp Leu Asp Ser Gly Val Thr Gly Ser Gly Leu Glu Gly Asp145
150 155 160His Leu Ser Asp Thr Ser Thr
Thr Ser Leu Glu Leu Asp Ser Arg Thr 165
170 175Ala Leu Leu Trp Gly Leu Lys Lys Lys Lys Gly Lys
Gln Gln Lys Asn 180 185 190Thr
Ser Tyr Ala Thr Asn Asp Leu Ile Ile 195
20010567PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 10Met Gly Arg
Gly Leu Leu Arg Gly Leu Trp Pro Leu His Ile Val Leu1 5
10 15Trp Thr Arg Ile Ala Ser Thr Ile Pro
Pro His Val Gln Lys Ser Val 20 25
30Asn Asn Asp Met Ile Val Thr Asp Asn Asn Gly Ala Val Lys Phe Pro
35 40 45Gln Leu Cys Lys Phe Cys Asp
Val Arg Phe Ser Thr Cys Asp Asn Gln 50 55
60Lys Ser Cys Met Ser Asn Cys Ser Ile Thr Ser Ile Cys Glu Lys Pro65
70 75 80Gln Glu Val Cys
Val Ala Val Trp Arg Lys Asn Asp Glu Asn Ile Thr 85
90 95Leu Glu Thr Val Cys His Asp Pro Lys Leu
Pro Tyr His Asp Phe Ile 100 105
110Leu Glu Asp Ala Ala Ser Pro Lys Cys Ile Met Lys Glu Lys Lys Lys
115 120 125Pro Gly Glu Thr Phe Phe Met
Cys Ser Cys Ser Ser Asp Glu Cys Asn 130 135
140Asp Asn Ile Ile Phe Ser Glu Glu Tyr Asn Thr Ser Asn Pro Asp
Leu145 150 155 160Leu Leu
Val Ile Phe Gln Val Thr Gly Ile Ser Leu Leu Pro Pro Leu
165 170 175Gly Val Ala Ile Ser Val Ile
Ile Ile Phe Tyr Cys Tyr Arg Val Asn 180 185
190Arg Gln Gln Lys Leu Ser Ser Thr Trp Glu Thr Gly Lys Thr
Arg Lys 195 200 205Leu Met Glu Phe
Ser Glu His Cys Ala Ile Ile Leu Glu Asp Asp Arg 210
215 220Ser Asp Ile Ser Ser Thr Cys Ala Asn Asn Ile Asn
His Asn Thr Glu225 230 235
240Leu Leu Pro Ile Glu Leu Asp Thr Leu Val Gly Lys Gly Arg Phe Ala
245 250 255Glu Val Tyr Lys Ala
Lys Leu Lys Gln Asn Thr Ser Glu Gln Phe Glu 260
265 270Thr Val Ala Val Lys Ile Phe Pro Tyr Glu Glu Tyr
Ala Ser Trp Lys 275 280 285Thr Glu
Lys Asp Ile Phe Ser Asp Ile Asn Leu Lys His Glu Asn Ile 290
295 300Leu Gln Phe Leu Thr Ala Glu Glu Arg Lys Thr
Glu Leu Gly Lys Gln305 310 315
320Tyr Trp Leu Ile Thr Ala Phe His Ala Lys Gly Asn Leu Gln Glu Tyr
325 330 335Leu Thr Arg His
Val Ile Ser Trp Glu Asp Leu Arg Lys Leu Gly Ser 340
345 350Ser Leu Ala Arg Gly Ile Ala His Leu His Ser
Asp His Thr Pro Cys 355 360 365Gly
Arg Pro Lys Met Pro Ile Val His Arg Asp Leu Asn Ser Ser Asn 370
375 380Ile Leu Val Lys Asn Asp Leu Thr Cys Cys
Leu Cys Asp Phe Gly Leu385 390 395
400Ser Leu Arg Leu Asp Pro Thr Leu Ser Val Asp Asp Leu Ala Asn
Ser 405 410 415Gly Gln Val
Gly Thr Ala Arg Tyr Met Ala Pro Glu Val Leu Glu Ser 420
425 430Arg Met Asn Leu Glu Asn Ala Glu Ser Phe
Lys Gln Thr Asp Val Tyr 435 440
445Ser Met Ala Leu Val Leu Trp Glu Met Thr Ser Arg Cys Asn Ala Val 450
455 460Gly Glu Val Lys Asp Tyr Glu Pro
Pro Phe Gly Ser Lys Val Arg Glu465 470
475 480His Pro Cys Val Glu Ser Met Lys Asp Asn Val Leu
Arg Asp Arg Gly 485 490
495Arg Pro Glu Ile Pro Ser Phe Trp Leu Asn His Gln Gly Ile Gln Met
500 505 510Val Cys Glu Thr Leu Thr
Glu Cys Trp Asp His Asp Pro Glu Ala Arg 515 520
525Leu Thr Ala Gln Cys Val Ala Glu Arg Phe Ser Glu Leu Glu
His Leu 530 535 540Asp Arg Leu Ser Gly
Arg Ser Cys Ser Glu Glu Lys Ile Pro Glu Asp545 550
555 560Gly Ser Leu Asn Thr Thr Lys
56511161PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 11Met Gly Arg
Gly Leu Leu Arg Gly Leu Trp Pro Leu His Ile Val Leu1 5
10 15Trp Thr Arg Ile Ala Ser Thr Ile Pro
Pro His Val Gln Lys Ser Val 20 25
30Asn Asn Asp Met Ile Val Thr Asp Asn Asn Gly Ala Val Lys Phe Pro
35 40 45Gln Leu Cys Lys Phe Cys Asp
Val Arg Phe Ser Thr Cys Asp Asn Gln 50 55
60Lys Ser Cys Met Ser Asn Cys Ser Ile Thr Ser Ile Cys Glu Lys Pro65
70 75 80Gln Glu Val Cys
Val Ala Val Trp Arg Lys Asn Asp Glu Asn Ile Thr 85
90 95Leu Glu Thr Val Cys His Asp Pro Lys Leu
Pro Tyr His Asp Phe Ile 100 105
110Leu Glu Asp Ala Ala Ser Pro Lys Cys Ile Met Lys Glu Lys Lys Ser
115 120 125Leu Val Arg Leu Ser Ser Cys
Val Pro Val Ala Leu Met Ser Ala Met 130 135
140Thr Thr Ser Ser Ser Gln Lys Asn Ile Thr Pro Ala Ile Leu Thr
Cys145 150 155
160Cys12130PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 12Met Gly Arg
Gly Leu Leu Arg Gly Leu Trp Pro Leu His Ile Val Leu1 5
10 15Trp Thr Arg Ile Ala Ser Thr Ile Pro
Pro His Val Gln Lys Ser Val 20 25
30Asn Asn Asp Met Ile Val Thr Asp Asn Asn Gly Ala Val Lys Phe Pro
35 40 45Gln Leu Cys Lys Phe Cys Asp
Val Arg Phe Ser Thr Cys Asp Asn Gln 50 55
60Lys Ser Cys Met Ser Asn Cys Ser Ile Thr Ser Ile Cys Glu Lys Pro65
70 75 80Gln Glu Val Cys
Val Ala Val Trp Arg Lys Asn Asp Glu Asn Ile Thr 85
90 95Leu Glu Thr Val Cys His Asp Pro Lys Leu
Pro Tyr His Asp Phe Ile 100 105
110Leu Glu Asp Ala Ala Ser Pro Lys Cys Ile Met Lys Glu Lys Lys Lys
115 120 125Ala Trp
13013332PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 13Met Gly Ala
Gln Phe Ser Lys Thr Ala Ala Lys Gly Glu Ala Ala Ala1 5
10 15Glu Arg Pro Gly Glu Ala Ala Val Ala
Ser Ser Pro Ser Lys Ala Asn 20 25
30Gly Gln Glu Asn Gly His Val Lys Val Asn Gly Asp Ala Ser Pro Ala
35 40 45Ala Ala Glu Ser Gly Ala Lys
Glu Glu Leu Gln Ala Asn Gly Ser Ala 50 55
60Pro Ala Ala Asp Lys Glu Glu Pro Ala Ala Ala Gly Ser Gly Ala Ala65
70 75 80Ser Pro Ser Ser
Ala Glu Lys Gly Glu Pro Ala Ala Ala Ala Ala Pro 85
90 95Glu Ala Gly Ala Ser Pro Val Glu Lys Glu
Ala Pro Ala Glu Gly Glu 100 105
110Ala Ala Glu Pro Gly Ser Ala Thr Ala Ala Glu Gly Glu Ala Ala Ser
115 120 125Ala Ala Ser Ser Thr Ser Ser
Pro Lys Ala Glu Asp Gly Ala Thr Pro 130 135
140Ser Pro Ser Asn Glu Thr Pro Lys Lys Lys Lys Lys Arg Phe Ser
Phe145 150 155 160Lys Lys
Ser Phe Lys Leu Ser Gly Phe Ser Phe Lys Lys Asn Lys Lys
165 170 175Glu Ala Gly Glu Gly Gly Glu
Ala Glu Ala Pro Ala Ala Glu Gly Gly 180 185
190Lys Asp Glu Ala Ala Gly Gly Ala Ala Ala Ala Ala Ala Glu
Ala Gly 195 200 205Ala Ala Ser Gly
Glu Gln Ala Ala Ala Pro Gly Glu Glu Ala Ala Ala 210
215 220Gly Glu Glu Gly Ala Ala Gly Gly Asp Pro Gln Glu
Ala Lys Pro Gln225 230 235
240Glu Ala Ala Val Ala Pro Glu Lys Pro Pro Ala Ser Asp Glu Thr Lys
245 250 255Ala Ala Glu Glu Pro
Ser Lys Val Glu Glu Lys Lys Ala Glu Glu Ala 260
265 270Gly Ala Ser Ala Ala Ala Cys Glu Ala Pro Ser Ala
Ala Gly Pro Gly 275 280 285Ala Pro
Pro Glu Gln Glu Ala Ala Pro Ala Glu Glu Pro Ala Ala Ala 290
295 300Ala Ala Ser Ser Ala Cys Ala Ala Pro Ser Gln
Glu Ala Gln Pro Glu305 310 315
320Cys Ser Pro Glu Ala Pro Pro Ala Glu Ala Ala Glu
325 33014165PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 14Met Gly Ala Gln Phe Ser Lys Thr Ala Ala Lys Gly Glu Ala
Ala Ala1 5 10 15Glu Arg
Pro Gly Glu Ala Ala Val Ala Ser Ser Pro Ser Lys Ala Asn 20
25 30Gly Gln Glu Asn Gly His Val Lys Val
Asn Gly Asp Ala Ser Pro Ala 35 40
45Ala Ala Glu Ser Gly Ala Lys Glu Glu Leu Gln Ala Asn Gly Ser Ala 50
55 60Pro Ala Ala Asp Lys Glu Glu Pro Ala
Ala Ala Gly Ser Gly Ala Ala65 70 75
80Ser Pro Ser Ser Ala Glu Lys Gly Glu Pro Ala Ala Ala Ala
Ala Pro 85 90 95Glu Ala
Gly Ala Ser Pro Val Glu Lys Glu Ala Pro Ala Glu Gly Glu 100
105 110Ala Ala Glu Pro Gly Ser Ala Thr Ala
Ala Glu Gly Glu Ala Ala Ser 115 120
125Ala Ala Ser Ser Thr Ser Ser Pro Lys Ala Glu Asp Gly Ala Thr Pro
130 135 140Ser Pro Ser Asn Glu Thr Pro
Lys Lys Lys Arg Ser Ala Phe Pro Ser145 150
155 160Arg Ser Leu Ser Ser
16515182PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 15Met Gly Ala
Gln Phe Ser Lys Thr Ala Ala Lys Gly Glu Ala Ala Ala1 5
10 15Glu Arg Pro Gly Glu Ala Ala Val Ala
Ser Ser Pro Ser Lys Ala Asn 20 25
30Gly Gln Glu Asn Gly His Val Lys Val Asn Gly Asp Ala Ser Pro Ala
35 40 45Ala Ala Glu Ser Gly Ala Lys
Glu Glu Leu Gln Ala Asn Gly Ser Ala 50 55
60Pro Ala Ala Asp Lys Glu Glu Pro Ala Ala Ala Gly Ser Gly Ala Ala65
70 75 80Ser Pro Ser Ser
Ala Glu Lys Gly Glu Pro Ala Ala Ala Ala Ala Pro 85
90 95Glu Ala Gly Ala Ser Pro Val Glu Lys Glu
Ala Pro Ala Glu Gly Glu 100 105
110Ala Ala Glu Pro Gly Ser Ala Thr Ala Ala Glu Gly Glu Ala Ala Ser
115 120 125Ala Ala Ser Ser Thr Ser Ser
Pro Lys Ala Glu Asp Gly Ala Thr Pro 130 135
140Ser Pro Ser Asn Glu Thr Pro Lys Lys Lys Lys Glu Ala Leu Phe
Leu145 150 155 160Gln Glu
Val Phe Gln Ala Glu Arg Leu Leu Leu Gln Glu Glu Gln Glu
165 170 175Gly Gly Trp Arg Arg Arg
18016596PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 16Met Pro Gln
Leu Asn Gly Gly Gly Gly Asp Asp Leu Gly Ala Asn Asp1 5
10 15Glu Leu Ile Ser Phe Lys Asp Glu Gly
Glu Gln Glu Glu Lys Ser Ser 20 25
30Glu Asn Ser Ser Ala Glu Arg Asp Leu Ala Asp Val Lys Ser Ser Leu
35 40 45Val Asn Glu Ser Glu Thr Asn
Gln Asn Ser Ser Ser Asp Ser Glu Ala 50 55
60Glu Arg Arg Pro Pro Pro Arg Ser Glu Ser Phe Arg Asp Lys Ser Arg65
70 75 80Glu Ser Leu Glu
Glu Ala Ala Lys Arg Gln Asp Gly Gly Leu Phe Lys 85
90 95Gly Pro Pro Tyr Pro Gly Tyr Pro Phe Ile
Met Ile Pro Asp Leu Thr 100 105
110Ser Pro Tyr Leu Pro Asn Gly Ser Leu Ser Pro Thr Ala Arg Thr Tyr
115 120 125Leu Gln Met Lys Trp Pro Leu
Leu Asp Val Gln Ala Gly Ser Leu Gln 130 135
140Ser Arg Gln Ala Leu Lys Asp Ala Arg Ser Pro Ser Pro Ala His
Ile145 150 155 160Val Ser
Asn Lys Val Pro Val Val Gln His Pro His His Val His Pro
165 170 175Leu Thr Pro Leu Ile Thr Tyr
Ser Asn Glu His Phe Thr Pro Gly Asn 180 185
190Pro Pro Pro His Leu Pro Ala Asp Val Asp Pro Lys Thr Gly
Ile Pro 195 200 205Arg Pro Pro His
Pro Pro Asp Ile Ser Pro Tyr Tyr Pro Leu Ser Pro 210
215 220Gly Thr Val Gly Gln Ile Pro His Pro Leu Gly Trp
Leu Val Pro Gln225 230 235
240Gln Gly Gln Pro Val Tyr Pro Ile Thr Thr Gly Gly Phe Arg His Pro
245 250 255Tyr Pro Thr Ala Leu
Thr Val Asn Ala Ser Val Ser Arg Phe Pro Pro 260
265 270His Met Val Pro Pro His His Thr Leu His Thr Thr
Gly Ile Pro His 275 280 285Pro Ala
Ile Val Thr Pro Thr Val Lys Gln Glu Ser Ser Gln Ser Asp 290
295 300Val Gly Ser Leu His Ser Ser Lys His Gln Asp
Ser Lys Lys Glu Glu305 310 315
320Glu Lys Lys Lys Pro His Ile Lys Lys Pro Leu Asn Ala Phe Met Leu
325 330 335Tyr Met Lys Glu
Met Arg Ala Lys Val Val Ala Glu Cys Thr Leu Lys 340
345 350Glu Ser Ala Ala Ile Asn Gln Ile Leu Gly Arg
Arg Trp His Ala Leu 355 360 365Ser
Arg Glu Glu Gln Ala Lys Tyr Tyr Glu Leu Ala Arg Lys Glu Arg 370
375 380Gln Leu His Met Gln Leu Tyr Pro Gly Trp
Ser Ala Arg Asp Asn Tyr385 390 395
400Gly Lys Lys Lys Lys Arg Lys Arg Asp Lys Gln Pro Gly Glu Thr
Asn 405 410 415Glu His Ser
Glu Cys Phe Leu Asn Pro Cys Leu Ser Leu Pro Pro Ile 420
425 430Thr Asp Leu Ser Ala Pro Lys Lys Cys Arg
Ala Arg Phe Gly Leu Asp 435 440
445Gln Gln Asn Asn Trp Cys Gly Pro Cys Arg Arg Lys Lys Lys Cys Val 450
455 460Arg Tyr Ile Gln Gly Glu Gly Ser
Cys Leu Ser Pro Pro Ser Ser Asp465 470
475 480Gly Ser Leu Leu Asp Ser Pro Pro Pro Ser Pro Asn
Leu Leu Gly Ser 485 490
495Pro Pro Arg Asp Ala Lys Ser Gln Thr Glu Gln Thr Gln Pro Leu Ser
500 505 510Leu Ser Leu Lys Pro Asp
Pro Leu Ala His Leu Ser Met Met Pro Pro 515 520
525Pro Pro Ala Leu Leu Leu Ala Glu Ala Thr His Lys Ala Ser
Ala Leu 530 535 540Cys Pro Asn Gly Ala
Leu Asp Leu Pro Pro Ala Ala Leu Gln Pro Ala545 550
555 560Ala Pro Ser Ser Ser Ile Ala Gln Pro Ser
Thr Ser Trp Leu His Ser 565 570
575His Ser Ser Leu Ala Gly Thr Gln Pro Gln Pro Leu Ser Leu Val Thr
580 585 590Lys Ser Leu Glu
59517483PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 17Met Pro Gln
Leu Asn Gly Gly Gly Gly Asp Asp Leu Gly Ala Asn Asp1 5
10 15Glu Leu Ile Ser Phe Lys Asp Glu Gly
Glu Gln Glu Glu Lys Ser Ser 20 25
30Glu Asn Ser Ser Ala Glu Arg Asp Leu Ala Asp Val Lys Ser Ser Leu
35 40 45Val Asn Glu Ser Glu Thr Asn
Gln Asn Ser Ser Ser Asp Ser Glu Ala 50 55
60Glu Arg Arg Pro Pro Pro Arg Ser Glu Ser Phe Arg Asp Lys Ser Arg65
70 75 80Glu Ser Leu Glu
Glu Ala Ala Lys Arg Gln Asp Gly Gly Leu Phe Lys 85
90 95Gly Pro Pro Tyr Pro Gly Tyr Pro Phe Ile
Met Ile Pro Asp Leu Thr 100 105
110Ser Pro Tyr Leu Pro Asn Gly Ser Leu Ser Pro Thr Ala Arg Thr Tyr
115 120 125Leu Gln Met Lys Trp Pro Leu
Leu Asp Val Gln Ala Gly Ser Leu Gln 130 135
140Ser Arg Gln Ala Leu Lys Asp Ala Arg Ser Pro Ser Pro Ala His
Ile145 150 155 160Val Ser
Asn Lys Val Pro Val Val Gln His Pro His His Val His Pro
165 170 175Leu Thr Pro Leu Ile Thr Tyr
Ser Asn Glu His Phe Thr Pro Gly Asn 180 185
190Pro Pro Pro His Leu Pro Ala Asp Val Asp Pro Lys Thr Gly
Ile Pro 195 200 205Arg Pro Pro His
Pro Pro Asp Ile Ser Pro Tyr Tyr Pro Leu Ser Pro 210
215 220Gly Thr Val Gly Gln Ile Pro His Pro Leu Gly Trp
Leu Val Pro Gln225 230 235
240Gln Gly Gln Pro Val Tyr Pro Ile Thr Thr Gly Gly Phe Arg His Pro
245 250 255Tyr Pro Thr Ala Leu
Thr Val Asn Ala Ser Val Ser Arg Phe Pro Pro 260
265 270His Met Val Pro Pro His His Thr Leu His Thr Thr
Gly Ile Pro His 275 280 285Pro Ala
Ile Val Thr Pro Thr Val Lys Gln Glu Ser Ser Gln Ser Asp 290
295 300Val Gly Ser Leu His Ser Ser Lys His Gln Asp
Ser Lys Lys Glu Glu305 310 315
320Glu Lys Lys Lys Pro His Ile Lys Lys Pro Leu Asn Ala Phe Met Leu
325 330 335Tyr Met Lys Glu
Met Arg Ala Lys Val Val Ala Glu Cys Thr Leu Lys 340
345 350Glu Ser Ala Ala Ile Asn Gln Ile Leu Gly Arg
Arg Trp His Ala Leu 355 360 365Ser
Arg Glu Glu Gln Ala Lys Tyr Tyr Glu Leu Ala Arg Lys Glu Arg 370
375 380Gln Leu His Met Gln Leu Tyr Pro Gly Trp
Ser Ala Arg Asp Asn Tyr385 390 395
400Gly Lys Lys Lys Lys Arg Lys Arg Asp Lys Gln Pro Gly Glu Thr
Asn 405 410 415Glu His Ser
Glu Cys Phe Leu Asn Pro Cys Leu Ser Leu Pro Pro Ile 420
425 430Thr Asp Leu Ser Ala Pro Lys Lys Cys Arg
Ala Arg Phe Gly Leu Asp 435 440
445Gln Gln Asn Asn Trp Cys Gly Pro Cys Arg Arg Lys Lys Ser Ala Phe 450
455 460Ala Thr Tyr Lys Val Lys Ala Ala
Ala Ser Ala His Pro Leu Gln Met465 470
475 480Glu Ala Tyr18469PRTArtificial SequenceDescription
of Artificial Sequence polypeptides encoded by genes with coding
microsatellites 18Met Pro Gln Leu Asn Gly Gly Gly Gly Asp Asp Leu Gly Ala
Asn Asp1 5 10 15Glu Leu
Ile Ser Phe Lys Asp Glu Gly Glu Gln Glu Glu Lys Ser Ser 20
25 30Glu Asn Ser Ser Ala Glu Arg Asp Leu
Ala Asp Val Lys Ser Ser Leu 35 40
45Val Asn Glu Ser Glu Thr Asn Gln Asn Ser Ser Ser Asp Ser Glu Ala 50
55 60Glu Arg Arg Pro Pro Pro Arg Ser Glu
Ser Phe Arg Asp Lys Ser Arg65 70 75
80Glu Ser Leu Glu Glu Ala Ala Lys Arg Gln Asp Gly Gly Leu
Phe Lys 85 90 95Gly Pro
Pro Tyr Pro Gly Tyr Pro Phe Ile Met Ile Pro Asp Leu Thr 100
105 110Ser Pro Tyr Leu Pro Asn Gly Ser Leu
Ser Pro Thr Ala Arg Thr Tyr 115 120
125Leu Gln Met Lys Trp Pro Leu Leu Asp Val Gln Ala Gly Ser Leu Gln
130 135 140Ser Arg Gln Ala Leu Lys Asp
Ala Arg Ser Pro Ser Pro Ala His Ile145 150
155 160Val Ser Asn Lys Val Pro Val Val Gln His Pro His
His Val His Pro 165 170
175Leu Thr Pro Leu Ile Thr Tyr Ser Asn Glu His Phe Thr Pro Gly Asn
180 185 190Pro Pro Pro His Leu Pro
Ala Asp Val Asp Pro Lys Thr Gly Ile Pro 195 200
205Arg Pro Pro His Pro Pro Asp Ile Ser Pro Tyr Tyr Pro Leu
Ser Pro 210 215 220Gly Thr Val Gly Gln
Ile Pro His Pro Leu Gly Trp Leu Val Pro Gln225 230
235 240Gln Gly Gln Pro Val Tyr Pro Ile Thr Thr
Gly Gly Phe Arg His Pro 245 250
255Tyr Pro Thr Ala Leu Thr Val Asn Ala Ser Val Ser Arg Phe Pro Pro
260 265 270His Met Val Pro Pro
His His Thr Leu His Thr Thr Gly Ile Pro His 275
280 285Pro Ala Ile Val Thr Pro Thr Val Lys Gln Glu Ser
Ser Gln Ser Asp 290 295 300Val Gly Ser
Leu His Ser Ser Lys His Gln Asp Ser Lys Lys Glu Glu305
310 315 320Glu Lys Lys Lys Pro His Ile
Lys Lys Pro Leu Asn Ala Phe Met Leu 325
330 335Tyr Met Lys Glu Met Arg Ala Lys Val Val Ala Glu
Cys Thr Leu Lys 340 345 350Glu
Ser Ala Ala Ile Asn Gln Ile Leu Gly Arg Arg Trp His Ala Leu 355
360 365Ser Arg Glu Glu Gln Ala Lys Tyr Tyr
Glu Leu Ala Arg Lys Glu Arg 370 375
380Gln Leu His Met Gln Leu Tyr Pro Gly Trp Ser Ala Arg Asp Asn Tyr385
390 395 400Gly Lys Lys Lys
Lys Arg Lys Arg Asp Lys Gln Pro Gly Glu Thr Asn 405
410 415Glu His Ser Glu Cys Phe Leu Asn Pro Cys
Leu Ser Leu Pro Pro Ile 420 425
430Thr Asp Leu Ser Ala Pro Lys Lys Cys Arg Ala Arg Phe Gly Leu Asp
435 440 445Gln Gln Asn Asn Trp Cys Gly
Pro Cys Arg Arg Lys Lys Lys Val Arg 450 455
460Ser Leu His Thr Arg46519556PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 19Ile Pro Ala Phe Pro Ala Gly Thr Val Leu Gln Pro Phe Pro
Glu Ala1 5 10 15Ala Leu
Ala Thr Arg Val Thr Val Pro Ala Val Glu Ala Pro Ala Ala 20
25 30Pro Arg Leu Asp Leu Glu Glu Ser Glu
Glu Phe Lys Glu Arg Cys Thr 35 40
45Gln Cys Ala Ala Val Ser Trp Gly Leu Thr Asp Glu Gly Lys Tyr Tyr 50
55 60Cys Thr Ser Cys His Asn Val Thr Glu
Arg Tyr Gln Glu Val Thr Asn65 70 75
80Thr Asp Leu Ile Pro Asn Thr Gln Ile Lys Ala Leu Asn Arg
Gly Leu 85 90 95Lys Lys
Lys Asn Asn Thr Glu Lys Gly Trp Asp Trp Tyr Val Cys Glu 100
105 110Gly Phe Gln Tyr Ile Leu Tyr Gln Gln
Ala Glu Ala Leu Lys Asn Leu 115 120
125Gly Val Gly Pro Glu Leu Lys Asn Asp Val Leu His Asn Phe Trp Lys
130 135 140Arg Tyr Leu Gln Lys Ser Lys
Gln Ala Tyr Cys Lys Asn Pro Val Tyr145 150
155 160Thr Thr Gly Arg Lys Pro Thr Val Leu Glu Asp Asn
Leu Ser His Ser 165 170
175Asp Trp Ala Ser Glu Pro Glu Leu Leu Ser Asp Val Ser Cys Pro Pro
180 185 190Phe Leu Glu Ser Gly Ala
Glu Ser Gln Ser Asp Ile His Thr Arg Lys 195 200
205Pro Phe Pro Val Ser Lys Ala Ser Gln Ser Glu Thr Ser Val
Cys Ser 210 215 220Gly Ser Leu Asp Gly
Val Glu Tyr Ser Gln Arg Lys Glu Lys Gly Ile225 230
235 240Val Lys Met Thr Met Pro Gln Thr Leu Ala
Phe Cys Tyr Leu Ser Leu 245 250
255Leu Trp Gln Arg Glu Ala Ile Thr Leu Ser Asp Leu Leu Arg Phe Val
260 265 270Glu Glu Asp His Ile
Pro Tyr Ile Asn Ala Phe Gln His Phe Pro Glu 275
280 285Gln Met Lys Leu Tyr Gly Arg Asp Arg Gly Ile Phe
Gly Ile Glu Ser 290 295 300Trp Pro Asp
Tyr Glu Asp Ile Tyr Lys Lys Thr Ile Glu Val Gly Thr305
310 315 320Phe Leu Asp Leu Pro Arg Phe
Pro Asp Ile Thr Glu Asp Cys Tyr Leu 325
330 335His Pro Asn Ile Leu Cys Met Lys Tyr Leu Met Glu
Val Asn Leu Pro 340 345 350Asp
Glu Met His Ser Leu Thr Cys His Val Val Lys Met Thr Gly Met 355
360 365Gly Glu Val Asp Phe Leu Thr Phe Asp
Pro Ile Ala Lys Met Ala Lys 370 375
380Ala Val Lys Tyr Asp Val Gln Ala Val Ala Ile Ile Val Val Val Leu385
390 395 400Lys Leu Leu Phe
Leu Met Asp Asp Ser Phe Glu Trp Ser Leu Ser Asn 405
410 415Leu Ala Glu Lys His Asn Glu Lys Asn Lys
Lys Asp Lys Pro Trp Phe 420 425
430Asp Phe Arg Lys Trp Tyr Gln Ile Met Lys Lys Ala Phe Asp Glu Lys
435 440 445Lys Gln Lys Trp Glu Glu Ala
Arg Ala Lys Tyr Leu Trp Lys Ser Glu 450 455
460Lys Pro Leu Tyr Tyr Ser Phe Val Asp Lys Pro Val Ala Tyr Lys
Lys465 470 475 480Arg Glu
Met Val Val Asn Leu Gln Lys Gln Phe Ser Thr Leu Val Asp
485 490 495Ser Thr Ala Thr Ala Gly Lys
Lys Ser Pro Ser Ser Phe Gln Phe Asn 500 505
510Trp Thr Glu Glu Asp Thr Asp Arg Thr Cys Phe His Gly His
Ser Leu 515 520 525Gln Gly Val Leu
Lys Glu Lys Gly Gln Ser Leu Leu Thr Lys Asn Ser 530
535 540Leu Tyr Trp Leu Ser Thr Gln Lys Phe Cys Arg Trp545
550 55520124PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 20Ile Pro Ala Phe Pro Ala Gly Thr Val
Leu Gln Pro Phe Pro Glu Ala1 5 10
15Ala Leu Ala Thr Arg Val Thr Val Pro Ala Val Glu Ala Pro Ala
Ala 20 25 30Pro Arg Leu Asp
Leu Glu Glu Ser Glu Glu Phe Lys Glu Arg Cys Thr 35
40 45Gln Cys Ala Ala Val Ser Trp Gly Leu Thr Asp Glu
Gly Lys Tyr Tyr 50 55 60Cys Thr Ser
Cys His Asn Val Thr Glu Arg Tyr Gln Glu Val Thr Asn65 70
75 80Thr Asp Leu Ile Pro Asn Thr Gln
Ile Lys Ala Leu Asn Arg Gly Leu 85 90
95Lys Lys Lys Thr Ile Leu Lys Lys Ala Gly Ile Gly Met Cys
Val Lys 100 105 110Val Ser Ser
Ile Phe Phe Ile Asn Lys Gln Lys Pro 115
12021102PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 21Ile Pro Ala
Phe Pro Ala Gly Thr Val Leu Gln Pro Phe Pro Glu Ala1 5
10 15Ala Leu Ala Thr Arg Val Thr Val Pro
Ala Val Glu Ala Pro Ala Ala 20 25
30Pro Arg Leu Asp Leu Glu Glu Ser Glu Glu Phe Lys Glu Arg Cys Thr
35 40 45Gln Cys Ala Ala Val Ser Trp
Gly Leu Thr Asp Glu Gly Lys Tyr Tyr 50 55
60Cys Thr Ser Cys His Asn Val Thr Glu Arg Tyr Gln Glu Val Thr Asn65
70 75 80Thr Asp Leu Ile
Pro Asn Thr Gln Ile Lys Ala Leu Asn Arg Gly Leu 85
90 95Lys Lys Lys Lys Gln Tyr
1002293PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 22Met Asp Thr
Gln Lys Gln Ile His Lys Thr His Asn Ser Lys Asn Gln1 5
10 15Phe Phe Thr Ile Phe Phe Phe Leu Ser
Val Glu Phe Gly Lys Glu Gly 20 25
30Thr Arg Lys Asn Phe Tyr Leu Leu Leu Ser Ile Gly His Tyr Gly Arg
35 40 45Lys Ser Arg Arg Ala Asp Leu
Gly Thr Ala Asp Thr Ala Asp Lys Thr 50 55
60Glu Pro Glu Cys Phe Ala Ala Ser Trp Thr Phe Asp Pro Asn Pro Ser65
70 75 80Val Thr Val Ser
Gly Ala His Ser Thr Ala Val His Gln 85
902380PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 23Met Asp Thr
Gln Lys Gln Ile His Lys Thr His Asn Ser Lys Asn Gln1 5
10 15Phe Phe Thr Ile Phe Phe Ser Cys Gln
Leu Asn Leu Gly Arg Lys Glu 20 25
30His Ala Lys Ile Phe Thr Phe Phe Phe Gln Leu Asp Thr Met Asp Gly
35 40 45Asn Pro Gly Glu Leu Thr Leu
Glu Leu Gln Thr Leu Gln Ile Lys Gln 50 55
60Ser Gln Asn Ala Leu Leu Pro Ala Gly Pro Leu Thr Gln Thr Pro Val65
70 75
802426PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 24Met Asp Thr
Gln Lys Gln Ile His Lys Thr His Asn Ser Lys Asn Gln1 5
10 15Phe Phe Thr Ile Phe Phe Phe Pro Val
Ser 20 2525760PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 25Met Ala Gly Gln Gln Phe Gln Tyr Asp
Asp Ser Gly Asn Thr Phe Phe1 5 10
15Tyr Phe Leu Thr Ser Phe Val Gly Leu Ile Val Ile Pro Ala Thr
Tyr 20 25 30Tyr Leu Trp Pro
Arg Asp Gln Asn Ala Glu Gln Ile Arg Leu Lys Asn 35
40 45Ile Arg Lys Val Tyr Gly Arg Cys Met Trp Tyr Arg
Leu Arg Leu Leu 50 55 60Lys Pro Gln
Pro Asn Ile Ile Pro Thr Val Lys Lys Ile Val Leu Leu65 70
75 80Ala Gly Trp Ala Leu Phe Leu Phe
Leu Ala Tyr Lys Val Ser Lys Thr 85 90
95Asp Arg Glu Tyr Gln Glu Tyr Asn Pro Tyr Glu Val Leu Asn
Leu Asp 100 105 110Pro Gly Ala
Thr Val Ala Glu Ile Lys Lys Gln Tyr Arg Leu Leu Ser 115
120 125Leu Lys Tyr His Pro Asp Lys Gly Gly Asp Glu
Val Met Phe Met Arg 130 135 140Ile Ala
Lys Ala Tyr Ala Ala Leu Thr Asp Glu Glu Ser Arg Lys Asn145
150 155 160Trp Glu Glu Phe Gly Asn Pro
Asp Gly Pro Gln Ala Thr Ser Phe Gly 165
170 175Ile Ala Leu Pro Ala Trp Ile Val Asp Gln Lys Asn
Ser Ile Leu Val 180 185 190Leu
Leu Val Tyr Gly Leu Ala Phe Met Val Ile Leu Pro Val Val Val 195
200 205Gly Ser Trp Trp Tyr Arg Ser Ile Arg
Tyr Ser Gly Asp Gln Ile Leu 210 215
220Ile Arg Thr Thr Gln Ile Tyr Thr Tyr Phe Val Tyr Lys Thr Arg Asn225
230 235 240Met Asp Met Lys
Arg Leu Ile Met Val Leu Ala Gly Ala Ser Glu Phe 245
250 255Asp Pro Gln Tyr Asn Lys Asp Ala Thr Ser
Arg Pro Thr Asp Asn Ile 260 265
270Leu Ile Pro Gln Leu Ile Arg Glu Ile Gly Ser Ile Asn Leu Lys Lys
275 280 285Asn Glu Pro Pro Leu Thr Cys
Pro Tyr Ser Leu Lys Ala Arg Val Leu 290 295
300Leu Leu Ser His Leu Ala Arg Met Lys Ile Pro Glu Thr Leu Glu
Glu305 310 315 320Asp Gln
Gln Phe Met Leu Lys Lys Cys Pro Ala Leu Leu Gln Glu Met
325 330 335Val Asn Val Ile Cys Gln Leu
Ile Val Met Ala Arg Asn Arg Glu Glu 340 345
350Arg Glu Phe Arg Ala Pro Thr Leu Ala Ser Leu Glu Asn Cys
Met Lys 355 360 365Leu Ser Gln Met
Ala Val Gln Gly Leu Gln Gln Phe Lys Ser Pro Leu 370
375 380Leu Gln Leu Pro His Ile Glu Glu Asp Asn Leu Arg
Arg Val Ser Asn385 390 395
400His Lys Lys Tyr Lys Ile Lys Thr Ile Gln Asp Leu Val Ser Leu Lys
405 410 415Glu Ser Asp Arg His
Thr Leu Leu His Phe Leu Glu Asp Glu Lys Tyr 420
425 430Glu Glu Val Met Ala Val Leu Gly Ser Phe Pro Tyr
Val Thr Met Asp 435 440 445Ile Lys
Ser Gln Val Leu Asp Asp Glu Asp Ser Asn Asn Ile Thr Val 450
455 460Gly Ser Leu Val Thr Val Leu Val Lys Leu Thr
Arg Gln Thr Met Ala465 470 475
480Glu Val Phe Glu Lys Glu Gln Ser Ile Cys Ala Ala Glu Glu Gln Pro
485 490 495Ala Glu Asp Gly
Gln Gly Glu Thr Asn Lys Asn Arg Thr Lys Gly Gly 500
505 510Trp Gln Gln Lys Ser Lys Gly Pro Lys Lys Thr
Ala Lys Ser Lys Lys 515 520 525Lys
Lys Pro Leu Lys Lys Lys Pro Thr Pro Val Leu Leu Pro Gln Ser 530
535 540Lys Gln Gln Lys Gln Lys Gln Ala Asn Gly
Val Val Gly Asn Glu Ala545 550 555
560Ala Val Lys Glu Asp Glu Glu Glu Val Ser Asp Lys Gly Ser Asp
Ser 565 570 575Glu Glu Glu
Glu Thr Asn Arg Asp Ser Gln Ser Glu Lys Asp Asp Gly 580
585 590Ser Asp Arg Asp Ser Asp Arg Glu Gln Asp
Glu Lys Gln Asn Lys Asp 595 600
605Asp Glu Ala Glu Trp Gln Glu Leu Gln Gln Ser Ile Gln Arg Lys Glu 610
615 620Arg Ala Leu Leu Glu Thr Lys Ser
Lys Ile Thr His Pro Val Tyr Ser625 630
635 640Leu Tyr Phe Pro Glu Glu Lys Gln Glu Trp Trp Trp
Leu Tyr Ile Ala 645 650
655Asp Arg Lys Glu Gln Thr Leu Ile Ser Met Pro Tyr His Val Cys Thr
660 665 670Leu Lys Asp Thr Glu Glu
Val Glu Leu Lys Phe Pro Ala Pro Gly Lys 675 680
685Pro Gly Asn Tyr Gln Tyr Thr Val Phe Leu Arg Ser Asp Ser
Tyr Met 690 695 700Gly Leu Asp Gln Ile
Lys Pro Leu Lys Leu Glu Val His Glu Ala Lys705 710
715 720Pro Val Pro Glu Asn His Pro Gln Trp Asp
Thr Ala Ile Glu Gly Asp 725 730
735Glu Asp Gln Glu Asp Ser Glu Gly Phe Glu Asp Ser Phe Glu Glu Glu
740 745 750Glu Glu Glu Glu Glu
Asp Asp Asp 755 76026531PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 26Met Ala Gly Gln Gln Phe Gln Tyr Asp
Asp Ser Gly Asn Thr Phe Phe1 5 10
15Tyr Phe Leu Thr Ser Phe Val Gly Leu Ile Val Ile Pro Ala Thr
Tyr 20 25 30Tyr Leu Trp Pro
Arg Asp Gln Asn Ala Glu Gln Ile Arg Leu Lys Asn 35
40 45Ile Arg Lys Val Tyr Gly Arg Cys Met Trp Tyr Arg
Leu Arg Leu Leu 50 55 60Lys Pro Gln
Pro Asn Ile Ile Pro Thr Val Lys Lys Ile Val Leu Leu65 70
75 80Ala Gly Trp Ala Leu Phe Leu Phe
Leu Ala Tyr Lys Val Ser Lys Thr 85 90
95Asp Arg Glu Tyr Gln Glu Tyr Asn Pro Tyr Glu Val Leu Asn
Leu Asp 100 105 110Pro Gly Ala
Thr Val Ala Glu Ile Lys Lys Gln Tyr Arg Leu Leu Ser 115
120 125Leu Lys Tyr His Pro Asp Lys Gly Gly Asp Glu
Val Met Phe Met Arg 130 135 140Ile Ala
Lys Ala Tyr Ala Ala Leu Thr Asp Glu Glu Ser Arg Lys Asn145
150 155 160Trp Glu Glu Phe Gly Asn Pro
Asp Gly Pro Gln Ala Thr Ser Phe Gly 165
170 175Ile Ala Leu Pro Ala Trp Ile Val Asp Gln Lys Asn
Ser Ile Leu Val 180 185 190Leu
Leu Val Tyr Gly Leu Ala Phe Met Val Ile Leu Pro Val Val Val 195
200 205Gly Ser Trp Trp Tyr Arg Ser Ile Arg
Tyr Ser Gly Asp Gln Ile Leu 210 215
220Ile Arg Thr Thr Gln Ile Tyr Thr Tyr Phe Val Tyr Lys Thr Arg Asn225
230 235 240Met Asp Met Lys
Arg Leu Ile Met Val Leu Ala Gly Ala Ser Glu Phe 245
250 255Asp Pro Gln Tyr Asn Lys Asp Ala Thr Ser
Arg Pro Thr Asp Asn Ile 260 265
270Leu Ile Pro Gln Leu Ile Arg Glu Ile Gly Ser Ile Asn Leu Lys Lys
275 280 285Asn Glu Pro Pro Leu Thr Cys
Pro Tyr Ser Leu Lys Ala Arg Val Leu 290 295
300Leu Leu Ser His Leu Ala Arg Met Lys Ile Pro Glu Thr Leu Glu
Glu305 310 315 320Asp Gln
Gln Phe Met Leu Lys Lys Cys Pro Ala Leu Leu Gln Glu Met
325 330 335Val Asn Val Ile Cys Gln Leu
Ile Val Met Ala Arg Asn Arg Glu Glu 340 345
350Arg Glu Phe Arg Ala Pro Thr Leu Ala Ser Leu Glu Asn Cys
Met Lys 355 360 365Leu Ser Gln Met
Ala Val Gln Gly Leu Gln Gln Phe Lys Ser Pro Leu 370
375 380Leu Gln Leu Pro His Ile Glu Glu Asp Asn Leu Arg
Arg Val Ser Asn385 390 395
400His Lys Lys Tyr Lys Ile Lys Thr Ile Gln Asp Leu Val Ser Leu Lys
405 410 415Glu Ser Asp Arg His
Thr Leu Leu His Phe Leu Glu Asp Glu Lys Tyr 420
425 430Glu Glu Val Met Ala Val Leu Gly Ser Phe Pro Tyr
Val Thr Met Asp 435 440 445Ile Lys
Ser Gln Val Leu Asp Asp Glu Asp Ser Asn Asn Ile Thr Val 450
455 460Gly Ser Leu Val Thr Val Leu Val Lys Leu Thr
Arg Gln Thr Met Ala465 470 475
480Glu Val Phe Glu Lys Glu Gln Ser Ile Cys Ala Ala Glu Glu Gln Pro
485 490 495Ala Glu Asp Gly
Gln Gly Glu Thr Asn Lys Asn Arg Thr Lys Gly Gly 500
505 510Trp Gln Gln Lys Ser Lys Gly Pro Lys Lys Thr
Ala Lys Ser Lys Lys 515 520 525Arg
Asn Leu 53027558PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
27Met Ala Gly Gln Gln Phe Gln Tyr Asp Asp Ser Gly Asn Thr Phe Phe1
5 10 15Tyr Phe Leu Thr Ser Phe
Val Gly Leu Ile Val Ile Pro Ala Thr Tyr 20 25
30Tyr Leu Trp Pro Arg Asp Gln Asn Ala Glu Gln Ile Arg
Leu Lys Asn 35 40 45Ile Arg Lys
Val Tyr Gly Arg Cys Met Trp Tyr Arg Leu Arg Leu Leu 50
55 60Lys Pro Gln Pro Asn Ile Ile Pro Thr Val Lys Lys
Ile Val Leu Leu65 70 75
80Ala Gly Trp Ala Leu Phe Leu Phe Leu Ala Tyr Lys Val Ser Lys Thr
85 90 95Asp Arg Glu Tyr Gln Glu
Tyr Asn Pro Tyr Glu Val Leu Asn Leu Asp 100
105 110Pro Gly Ala Thr Val Ala Glu Ile Lys Lys Gln Tyr
Arg Leu Leu Ser 115 120 125Leu Lys
Tyr His Pro Asp Lys Gly Gly Asp Glu Val Met Phe Met Arg 130
135 140Ile Ala Lys Ala Tyr Ala Ala Leu Thr Asp Glu
Glu Ser Arg Lys Asn145 150 155
160Trp Glu Glu Phe Gly Asn Pro Asp Gly Pro Gln Ala Thr Ser Phe Gly
165 170 175Ile Ala Leu Pro
Ala Trp Ile Val Asp Gln Lys Asn Ser Ile Leu Val 180
185 190Leu Leu Val Tyr Gly Leu Ala Phe Met Val Ile
Leu Pro Val Val Val 195 200 205Gly
Ser Trp Trp Tyr Arg Ser Ile Arg Tyr Ser Gly Asp Gln Ile Leu 210
215 220Ile Arg Thr Thr Gln Ile Tyr Thr Tyr Phe
Val Tyr Lys Thr Arg Asn225 230 235
240Met Asp Met Lys Arg Leu Ile Met Val Leu Ala Gly Ala Ser Glu
Phe 245 250 255Asp Pro Gln
Tyr Asn Lys Asp Ala Thr Ser Arg Pro Thr Asp Asn Ile 260
265 270Leu Ile Pro Gln Leu Ile Arg Glu Ile Gly
Ser Ile Asn Leu Lys Lys 275 280
285Asn Glu Pro Pro Leu Thr Cys Pro Tyr Ser Leu Lys Ala Arg Val Leu 290
295 300Leu Leu Ser His Leu Ala Arg Met
Lys Ile Pro Glu Thr Leu Glu Glu305 310
315 320Asp Gln Gln Phe Met Leu Lys Lys Cys Pro Ala Leu
Leu Gln Glu Met 325 330
335Val Asn Val Ile Cys Gln Leu Ile Val Met Ala Arg Asn Arg Glu Glu
340 345 350Arg Glu Phe Arg Ala Pro
Thr Leu Ala Ser Leu Glu Asn Cys Met Lys 355 360
365Leu Ser Gln Met Ala Val Gln Gly Leu Gln Gln Phe Lys Ser
Pro Leu 370 375 380Leu Gln Leu Pro His
Ile Glu Glu Asp Asn Leu Arg Arg Val Ser Asn385 390
395 400His Lys Lys Tyr Lys Ile Lys Thr Ile Gln
Asp Leu Val Ser Leu Lys 405 410
415Glu Ser Asp Arg His Thr Leu Leu His Phe Leu Glu Asp Glu Lys Tyr
420 425 430Glu Glu Val Met Ala
Val Leu Gly Ser Phe Pro Tyr Val Thr Met Asp 435
440 445Ile Lys Ser Gln Val Leu Asp Asp Glu Asp Ser Asn
Asn Ile Thr Val 450 455 460Gly Ser Leu
Val Thr Val Leu Val Lys Leu Thr Arg Gln Thr Met Ala465
470 475 480Glu Val Phe Glu Lys Glu Gln
Ser Ile Cys Ala Ala Glu Glu Gln Pro 485
490 495Ala Glu Asp Gly Gln Gly Glu Thr Asn Lys Asn Arg
Thr Lys Gly Gly 500 505 510Trp
Gln Gln Lys Ser Lys Gly Pro Lys Lys Thr Ala Lys Ser Lys Lys 515
520 525Lys Glu Thr Phe Lys Lys Lys Thr Tyr
Thr Cys Ala Ile Thr Thr Val 530 535
540Lys Ala Thr Glu Thr Lys Ala Gly Lys Trp Ser Arg Trp Glu545
550 55528561PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 28Met Ala Gly Gln Gln Phe Gln Tyr Asp Asp Ser Gly Asn Thr
Phe Phe1 5 10 15Tyr Phe
Leu Thr Ser Phe Val Gly Leu Ile Val Ile Pro Ala Thr Tyr 20
25 30Tyr Leu Trp Pro Arg Asp Gln Asn Ala
Glu Gln Ile Arg Leu Lys Asn 35 40
45Ile Arg Lys Val Tyr Gly Arg Cys Met Trp Tyr Arg Leu Arg Leu Leu 50
55 60Lys Pro Gln Pro Asn Ile Ile Pro Thr
Val Lys Lys Ile Val Leu Leu65 70 75
80Ala Gly Trp Ala Leu Phe Leu Phe Leu Ala Tyr Lys Val Ser
Lys Thr 85 90 95Asp Arg
Glu Tyr Gln Glu Tyr Asn Pro Tyr Glu Val Leu Asn Leu Asp 100
105 110Pro Gly Ala Thr Val Ala Glu Ile Lys
Lys Gln Tyr Arg Leu Leu Ser 115 120
125Leu Lys Tyr His Pro Asp Lys Gly Gly Asp Glu Val Met Phe Met Arg
130 135 140Ile Ala Lys Ala Tyr Ala Ala
Leu Thr Asp Glu Glu Ser Arg Lys Asn145 150
155 160Trp Glu Glu Phe Gly Asn Pro Asp Gly Pro Gln Ala
Thr Ser Phe Gly 165 170
175Ile Ala Leu Pro Ala Trp Ile Val Asp Gln Lys Asn Ser Ile Leu Val
180 185 190Leu Leu Val Tyr Gly Leu
Ala Phe Met Val Ile Leu Pro Val Val Val 195 200
205Gly Ser Trp Trp Tyr Arg Ser Ile Arg Tyr Ser Gly Asp Gln
Ile Leu 210 215 220Ile Arg Thr Thr Gln
Ile Tyr Thr Tyr Phe Val Tyr Lys Thr Arg Asn225 230
235 240Met Asp Met Lys Arg Leu Ile Met Val Leu
Ala Gly Ala Ser Glu Phe 245 250
255Asp Pro Gln Tyr Asn Lys Asp Ala Thr Ser Arg Pro Thr Asp Asn Ile
260 265 270Leu Ile Pro Gln Leu
Ile Arg Glu Ile Gly Ser Ile Asn Leu Lys Lys 275
280 285Asn Glu Pro Pro Leu Thr Cys Pro Tyr Ser Leu Lys
Ala Arg Val Leu 290 295 300Leu Leu Ser
His Leu Ala Arg Met Lys Ile Pro Glu Thr Leu Glu Glu305
310 315 320Asp Gln Gln Phe Met Leu Lys
Lys Cys Pro Ala Leu Leu Gln Glu Met 325
330 335Val Asn Val Ile Cys Gln Leu Ile Val Met Ala Arg
Asn Arg Glu Glu 340 345 350Arg
Glu Phe Arg Ala Pro Thr Leu Ala Ser Leu Glu Asn Cys Met Lys 355
360 365Leu Ser Gln Met Ala Val Gln Gly Leu
Gln Gln Phe Lys Ser Pro Leu 370 375
380Leu Gln Leu Pro His Ile Glu Glu Asp Asn Leu Arg Arg Val Ser Asn385
390 395 400His Lys Lys Tyr
Lys Ile Lys Thr Ile Gln Asp Leu Val Ser Leu Lys 405
410 415Glu Ser Asp Arg His Thr Leu Leu His Phe
Leu Glu Asp Glu Lys Tyr 420 425
430Glu Glu Val Met Ala Val Leu Gly Ser Phe Pro Tyr Val Thr Met Asp
435 440 445Ile Lys Ser Gln Val Leu Asp
Asp Glu Asp Ser Asn Asn Ile Thr Val 450 455
460Gly Ser Leu Val Thr Val Leu Val Lys Leu Thr Arg Gln Thr Met
Ala465 470 475 480Glu Val
Phe Glu Lys Glu Gln Ser Ile Cys Ala Ala Glu Glu Gln Pro
485 490 495Ala Glu Asp Gly Gln Gly Glu
Thr Asn Lys Asn Arg Thr Lys Gly Gly 500 505
510Trp Gln Gln Lys Ser Lys Gly Pro Lys Lys Thr Ala Lys Ser
Lys Lys 515 520 525Lys Lys Pro Leu
Lys Lys Asn Leu His Leu Cys Tyr Tyr His Ser Gln 530
535 540Ser Asn Arg Asn Lys Ser Arg Gln Met Glu Ser Leu
Gly Met Lys Leu545 550 555
560Gln29558PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 29Met Ala Gly
Gln Gln Phe Gln Tyr Asp Asp Ser Gly Asn Thr Phe Phe1 5
10 15Tyr Phe Leu Thr Ser Phe Val Gly Leu
Ile Val Ile Pro Ala Thr Tyr 20 25
30Tyr Leu Trp Pro Arg Asp Gln Asn Ala Glu Gln Ile Arg Leu Lys Asn
35 40 45Ile Arg Lys Val Tyr Gly Arg
Cys Met Trp Tyr Arg Leu Arg Leu Leu 50 55
60Lys Pro Gln Pro Asn Ile Ile Pro Thr Val Lys Lys Ile Val Leu Leu65
70 75 80Ala Gly Trp Ala
Leu Phe Leu Phe Leu Ala Tyr Lys Val Ser Lys Thr 85
90 95Asp Arg Glu Tyr Gln Glu Tyr Asn Pro Tyr
Glu Val Leu Asn Leu Asp 100 105
110Pro Gly Ala Thr Val Ala Glu Ile Lys Lys Gln Tyr Arg Leu Leu Ser
115 120 125Leu Lys Tyr His Pro Asp Lys
Gly Gly Asp Glu Val Met Phe Met Arg 130 135
140Ile Ala Lys Ala Tyr Ala Ala Leu Thr Asp Glu Glu Ser Arg Lys
Asn145 150 155 160Trp Glu
Glu Phe Gly Asn Pro Asp Gly Pro Gln Ala Thr Ser Phe Gly
165 170 175Ile Ala Leu Pro Ala Trp Ile
Val Asp Gln Lys Asn Ser Ile Leu Val 180 185
190Leu Leu Val Tyr Gly Leu Ala Phe Met Val Ile Leu Pro Val
Val Val 195 200 205Gly Ser Trp Trp
Tyr Arg Ser Ile Arg Tyr Ser Gly Asp Gln Ile Leu 210
215 220Ile Arg Thr Thr Gln Ile Tyr Thr Tyr Phe Val Tyr
Lys Thr Arg Asn225 230 235
240Met Asp Met Lys Arg Leu Ile Met Val Leu Ala Gly Ala Ser Glu Phe
245 250 255Asp Pro Gln Tyr Asn
Lys Asp Ala Thr Ser Arg Pro Thr Asp Asn Ile 260
265 270Leu Ile Pro Gln Leu Ile Arg Glu Ile Gly Ser Ile
Asn Leu Lys Lys 275 280 285Asn Glu
Pro Pro Leu Thr Cys Pro Tyr Ser Leu Lys Ala Arg Val Leu 290
295 300Leu Leu Ser His Leu Ala Arg Met Lys Ile Pro
Glu Thr Leu Glu Glu305 310 315
320Asp Gln Gln Phe Met Leu Lys Lys Cys Pro Ala Leu Leu Gln Glu Met
325 330 335Val Asn Val Ile
Cys Gln Leu Ile Val Met Ala Arg Asn Arg Glu Glu 340
345 350Arg Glu Phe Arg Ala Pro Thr Leu Ala Ser Leu
Glu Asn Cys Met Lys 355 360 365Leu
Ser Gln Met Ala Val Gln Gly Leu Gln Gln Phe Lys Ser Pro Leu 370
375 380Leu Gln Leu Pro His Ile Glu Glu Asp Asn
Leu Arg Arg Val Ser Asn385 390 395
400His Lys Lys Tyr Lys Ile Lys Thr Ile Gln Asp Leu Val Ser Leu
Lys 405 410 415Glu Ser Asp
Arg His Thr Leu Leu His Phe Leu Glu Asp Glu Lys Tyr 420
425 430Glu Glu Val Met Ala Val Leu Gly Ser Phe
Pro Tyr Val Thr Met Asp 435 440
445Ile Lys Ser Gln Val Leu Asp Asp Glu Asp Ser Asn Asn Ile Thr Val 450
455 460Gly Ser Leu Val Thr Val Leu Val
Lys Leu Thr Arg Gln Thr Met Ala465 470
475 480Glu Val Phe Glu Lys Glu Gln Ser Ile Cys Ala Ala
Glu Glu Gln Pro 485 490
495Ala Glu Asp Gly Gln Gly Glu Thr Asn Lys Asn Arg Thr Lys Gly Gly
500 505 510Trp Gln Gln Lys Ser Lys
Gly Pro Lys Lys Thr Ala Lys Ser Lys Lys 515 520
525Lys Lys Pro Leu Lys Lys Lys Thr Tyr Thr Cys Ala Ile Thr
Thr Val 530 535 540Lys Ala Thr Glu Thr
Lys Ala Gly Lys Trp Ser Arg Trp Glu545 550
55530418PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 30Met Phe Lys
Gly Ile Leu Gln Ser Gly Leu Asp Asn Phe Val Ile Asn1 5
10 15His Met Leu Lys Asn Asn Val Ala Gly
Gln Thr Ser Ile Gln Thr Leu 20 25
30Val Pro Asn Thr Asp Gln Lys Ser Thr Ser Val Lys Lys Asp Asn His
35 40 45Lys Lys Lys Thr Val Lys Met
Leu Glu Tyr Leu Gly Lys Asp Val Leu 50 55
60His Gly Val Phe Asn Tyr Leu Ala Lys His Asp Val Leu Thr Leu Lys65
70 75 80Glu Glu Glu Lys
Lys Lys Tyr Tyr Asp Ala Lys Ile Glu Asp Lys Ala 85
90 95Leu Ile Leu Val Asp Ser Leu Arg Lys Asn
Arg Val Ala His Gln Met 100 105
110Phe Thr Gln Thr Leu Leu Asn Met Asp Gln Lys Ile Thr Ser Val Lys
115 120 125Pro Leu Leu Gln Ile Glu Ala
Gly Pro Pro Glu Ser Ala Glu Ser Thr 130 135
140Asn Ile Leu Lys Leu Cys Pro Arg Glu Glu Phe Leu Arg Leu Cys
Lys145 150 155 160Lys Asn
His Asp Glu Ile Tyr Pro Ile Lys Lys Arg Glu Asp Arg Arg
165 170 175Arg Leu Ala Leu Ile Ile Cys
Asn Thr Lys Phe Asp His Leu Pro Ala 180 185
190Arg Asn Gly Ala His Tyr Asp Ile Val Gly Met Lys Arg Leu
Leu Gln 195 200 205Gly Leu Gly Tyr
Thr Val Val Asp Glu Lys Asn Leu Thr Ala Arg Asp 210
215 220Met Glu Ser Val Leu Arg Ala Phe Ala Ala Arg Pro
Glu His Lys Ser225 230 235
240Ser Asp Ser Thr Phe Leu Val Leu Met Ser His Gly Ile Leu Glu Gly
245 250 255Ile Cys Gly Thr Ala
His Lys Lys Lys Lys Pro Asp Val Leu Leu Tyr 260
265 270Asp Thr Ile Phe Gln Ile Phe Asn Asn Arg Asn Cys
Leu Ser Leu Lys 275 280 285Asp Lys
Pro Lys Val Ile Ile Val Gln Ala Cys Arg Gly Glu Lys His 290
295 300Gly Glu Leu Trp Val Arg Asp Ser Pro Ala Ser
Leu Ala Val Ile Ser305 310 315
320Ser Gln Ser Ser Glu Asn Leu Glu Ala Asp Ser Val Cys Lys Ile His
325 330 335Glu Glu Lys Asp
Phe Ile Ala Phe Cys Ser Ser Thr Pro His Asn Val 340
345 350Ser Trp Arg Asp Arg Thr Arg Gly Ser Ile Phe
Ile Thr Glu Leu Ile 355 360 365Thr
Cys Phe Gln Lys Tyr Ser Cys Cys Cys His Leu Met Glu Ile Phe 370
375 380Arg Lys Val Gln Lys Ser Phe Glu Val Pro
Gln Ala Lys Ala Gln Met385 390 395
400Pro Thr Ile Glu Arg Ala Thr Leu Thr Arg Asp Phe Tyr Leu Phe
Pro 405 410 415Gly
Asn3176PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 31Met Phe Lys
Gly Ile Leu Gln Ser Gly Leu Asp Asn Phe Val Ile Asn1 5
10 15His Met Leu Lys Asn Asn Val Ala Gly
Gln Thr Ser Ile Gln Thr Leu 20 25
30Val Pro Asn Thr Asp Gln Lys Ser Thr Ser Val Lys Lys Asp Asn His
35 40 45Lys Lys Lys Gln Leu Arg Cys
Trp Asn Thr Trp Ala Lys Met Phe Phe 50 55
60Met Val Phe Leu Ile Ile Trp Gln Asn Thr Met Phe65
70 753253PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
32Met Phe Lys Gly Ile Leu Gln Ser Gly Leu Asp Asn Phe Val Ile Asn1
5 10 15His Met Leu Lys Asn Asn
Val Ala Gly Gln Thr Ser Ile Gln Thr Leu 20 25
30Val Pro Asn Thr Asp Gln Lys Ser Thr Ser Val Lys Lys
Asp Asn His 35 40 45Lys Lys Lys
Asn Ser 5033343PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
33Met Glu Ser Lys Tyr Lys Glu Ile Leu Leu Leu Thr Gly Leu Asp Asn1
5 10 15Ile Thr Asp Glu Glu Leu
Asp Arg Phe Lys Phe Phe Leu Ser Asp Glu 20 25
30Phe Asn Ile Ala Thr Gly Lys Leu His Thr Ala Asn Arg
Ile Gln Val 35 40 45Ala Thr Leu
Met Ile Gln Asn Ala Gly Ala Val Ser Ala Val Met Lys 50
55 60Thr Ile Arg Ile Phe Gln Lys Leu Asn Tyr Met Leu
Leu Ala Lys Arg65 70 75
80Leu Gln Glu Glu Lys Glu Lys Val Asp Lys Gln Tyr Lys Ser Val Thr
85 90 95Lys Pro Lys Pro Leu Ser
Gln Ala Glu Met Ser Pro Ala Ala Ser Ala 100
105 110Ala Ile Arg Asn Asp Val Ala Lys Gln Arg Ala Ala
Pro Lys Val Ser 115 120 125Pro His
Val Lys Pro Glu Gln Lys Gln Met Val Ala Gln Gln Glu Ser 130
135 140Ile Arg Glu Gly Phe Gln Lys Arg Cys Leu Pro
Val Met Val Leu Lys145 150 155
160Ala Lys Lys Pro Phe Thr Phe Glu Thr Gln Glu Gly Lys Gln Glu Met
165 170 175Phe His Ala Thr
Val Ala Thr Glu Lys Glu Phe Phe Phe Val Lys Val 180
185 190Phe Asn Thr Leu Leu Lys Asp Lys Phe Ile Pro
Lys Arg Ile Ile Ile 195 200 205Ile
Ala Arg Tyr Tyr Arg His Ser Gly Phe Leu Glu Val Asn Ser Ala 210
215 220Ser Arg Val Leu Asp Ala Glu Ser Asp Gln
Lys Val Asn Val Pro Leu225 230 235
240Asn Ile Ile Arg Lys Ala Gly Glu Thr Pro Lys Ile Asn Thr Leu
Gln 245 250 255Thr Gln Pro
Leu Gly Thr Ile Val Asn Gly Leu Phe Val Val Gln Lys 260
265 270Val Thr Glu Lys Lys Lys Asn Ile Leu Phe
Asp Leu Ser Asp Asn Thr 275 280
285Gly Lys Met Glu Val Leu Gly Val Arg Asn Glu Asp Thr Met Lys Cys 290
295 300Lys Glu Gly Asp Lys Val Arg Leu
Thr Phe Phe Thr Leu Ser Lys Asn305 310
315 320Gly Glu Lys Leu Gln Leu Thr Ser Gly Val His Ser
Thr Ile Lys Val 325 330
335Ile Lys Ala Lys Lys Lys Thr 34034355PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 34Met Glu Ser Lys Tyr Lys Glu Ile Leu
Leu Leu Thr Gly Leu Asp Asn1 5 10
15Ile Thr Asp Glu Glu Leu Asp Arg Phe Lys Phe Phe Leu Ser Asp
Glu 20 25 30Phe Asn Ile Ala
Thr Gly Lys Leu His Thr Ala Asn Arg Ile Gln Val 35
40 45Ala Thr Leu Met Ile Gln Asn Ala Gly Ala Val Ser
Ala Val Met Lys 50 55 60Thr Ile Arg
Ile Phe Gln Lys Leu Asn Tyr Met Leu Leu Ala Lys Arg65 70
75 80Leu Gln Glu Glu Lys Glu Lys Val
Asp Lys Gln Tyr Lys Ser Val Thr 85 90
95Lys Pro Lys Pro Leu Ser Gln Ala Glu Met Ser Pro Ala Ala
Ser Ala 100 105 110Ala Ile Arg
Asn Asp Val Ala Lys Gln Arg Ala Ala Pro Lys Val Ser 115
120 125Pro His Val Lys Pro Glu Gln Lys Gln Met Val
Ala Gln Gln Glu Ser 130 135 140Ile Arg
Glu Gly Phe Gln Lys Arg Cys Leu Pro Val Met Val Leu Lys145
150 155 160Ala Lys Lys Pro Phe Thr Phe
Glu Thr Gln Glu Gly Lys Gln Glu Met 165
170 175Phe His Ala Thr Val Ala Thr Glu Lys Glu Phe Phe
Phe Val Lys Val 180 185 190Phe
Asn Thr Leu Leu Lys Asp Lys Phe Ile Pro Lys Arg Ile Ile Ile 195
200 205Ile Ala Arg Tyr Tyr Arg His Ser Gly
Phe Leu Glu Val Asn Ser Ala 210 215
220Ser Arg Val Leu Asp Ala Glu Ser Asp Gln Lys Val Asn Val Pro Leu225
230 235 240Asn Ile Ile Arg
Lys Ala Gly Glu Thr Pro Lys Ile Asn Thr Leu Gln 245
250 255Thr Gln Pro Leu Gly Thr Ile Val Asn Gly
Leu Phe Val Val Gln Lys 260 265
270Val Thr Glu Lys Lys Lys Asn Ile Leu Phe Asp Leu Ser Asp Asn Thr
275 280 285Gly Lys Met Glu Val Leu Gly
Val Arg Asn Glu Asp Thr Met Lys Cys 290 295
300Lys Glu Gly Asp Lys Val Arg Leu Thr Phe Phe Thr Leu Ser Lys
Asn305 310 315 320Gly Glu
Lys Leu Gln Leu Thr Ser Gly Val His Ser Thr Ile Lys Val
325 330 335Ile Lys Ala Lys Lys Lys His
Arg Glu Val Lys Arg Thr Asn Ser Ser 340 345
350Gln Leu Val 35535346PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 35Met Glu Ser Lys Tyr Lys Glu Ile Leu
Leu Leu Thr Gly Leu Asp Asn1 5 10
15Ile Thr Asp Glu Glu Leu Asp Arg Phe Lys Phe Phe Leu Ser Asp
Glu 20 25 30Phe Asn Ile Ala
Thr Gly Lys Leu His Thr Ala Asn Arg Ile Gln Val 35
40 45Ala Thr Leu Met Ile Gln Asn Ala Gly Ala Val Ser
Ala Val Met Lys 50 55 60Thr Ile Arg
Ile Phe Gln Lys Leu Asn Tyr Met Leu Leu Ala Lys Arg65 70
75 80Leu Gln Glu Glu Lys Glu Lys Val
Asp Lys Gln Tyr Lys Ser Val Thr 85 90
95Lys Pro Lys Pro Leu Ser Gln Ala Glu Met Ser Pro Ala Ala
Ser Ala 100 105 110Ala Ile Arg
Asn Asp Val Ala Lys Gln Arg Ala Ala Pro Lys Val Ser 115
120 125Pro His Val Lys Pro Glu Gln Lys Gln Met Val
Ala Gln Gln Glu Ser 130 135 140Ile Arg
Glu Gly Phe Gln Lys Arg Cys Leu Pro Val Met Val Leu Lys145
150 155 160Ala Lys Lys Pro Phe Thr Phe
Glu Thr Gln Glu Gly Lys Gln Glu Met 165
170 175Phe His Ala Thr Val Ala Thr Glu Lys Glu Phe Phe
Phe Val Lys Val 180 185 190Phe
Asn Thr Leu Leu Lys Asp Lys Phe Ile Pro Lys Arg Ile Ile Ile 195
200 205Ile Ala Arg Tyr Tyr Arg His Ser Gly
Phe Leu Glu Val Asn Ser Ala 210 215
220Ser Arg Val Leu Asp Ala Glu Ser Asp Gln Lys Val Asn Val Pro Leu225
230 235 240Asn Ile Ile Arg
Lys Ala Gly Glu Thr Pro Lys Ile Asn Thr Leu Gln 245
250 255Thr Gln Pro Leu Gly Thr Ile Val Asn Gly
Leu Phe Val Val Gln Lys 260 265
270Val Thr Glu Lys Lys Lys Asn Ile Leu Phe Asp Leu Ser Asp Asn Thr
275 280 285Gly Lys Met Glu Val Leu Gly
Val Arg Asn Glu Asp Thr Met Lys Cys 290 295
300Lys Glu Gly Asp Lys Val Arg Leu Thr Phe Phe Thr Leu Ser Lys
Asn305 310 315 320Gly Glu
Lys Leu Gln Leu Thr Ser Gly Val His Ser Thr Ile Lys Val
325 330 335Ile Lys Ala Lys Lys Lys Asn
Ile Glu Lys 340 34536650PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 36Met Met Gly Ile Gly Lys Asn Thr Thr
Ser Lys Ser Met Glu Ala Gly1 5 10
15Ser Ser Thr Glu Gly Lys Tyr Glu Asp Glu Ala Lys His Pro Ala
Phe 20 25 30Phe Thr Leu Pro
Val Val Ile Asn Gly Gly Ala Thr Ser Ser Gly Glu 35
40 45Gln Asp Asn Glu Asp Thr Glu Leu Met Ala Ile Tyr
Thr Thr Glu Asn 50 55 60Gly Ile Ala
Glu Lys Ser Ser Leu Ala Glu Thr Leu Asp Ser Thr Gly65 70
75 80Ser Leu Asp Pro Gln Arg Ser Asp
Met Ile Tyr Thr Ile Glu Asp Val 85 90
95Pro Pro Trp Tyr Leu Cys Ile Phe Leu Gly Leu Gln His Tyr
Leu Thr 100 105 110Cys Phe Ser
Gly Thr Ile Ala Val Pro Phe Leu Leu Ala Asp Ala Met 115
120 125Cys Val Gly Tyr Asp Gln Trp Ala Thr Ser Gln
Leu Ile Gly Thr Ile 130 135 140Phe Phe
Cys Val Gly Ile Thr Thr Leu Leu Gln Thr Thr Phe Gly Cys145
150 155 160Arg Leu Pro Leu Phe Gln Thr
Ser Ala Phe Ala Phe Leu Ala Pro Ala 165
170 175Arg Ala Ile Leu Ser Leu Asp Lys Trp Lys Cys Asn
Thr Thr Asp Val 180 185 190Ser
Val Ala Asn Gly Thr Ala Glu Leu Leu His Thr Glu His Ile Trp 195
200 205Tyr Pro Arg Ile Arg Glu Ile Gln Gly
Ala Ile Ile Met Ser Ser Leu 210 215
220Ile Glu Val Val Ile Gly Leu Leu Gly Leu Pro Gly Ala Leu Leu Lys225
230 235 240Tyr Ile Gly Pro
Leu Thr Ile Thr Pro Thr Val Ala Leu Ile Gly Leu 245
250 255Ser Gly Phe Gln Ala Ala Gly Glu Arg Ala
Gly Lys His Trp Gly Ile 260 265
270Ala Met Leu Thr Ile Phe Leu Val Leu Leu Phe Ser Gln Tyr Ala Arg
275 280 285Asn Val Lys Phe Pro Leu Pro
Ile Tyr Lys Ser Lys Lys Gly Trp Thr 290 295
300Ala Tyr Lys Leu Gln Leu Phe Lys Met Phe Pro Ile Ile Leu Ala
Ile305 310 315 320Leu Val
Ser Trp Leu Leu Cys Phe Ile Phe Thr Val Thr Asp Val Phe
325 330 335Pro Pro Asp Ser Thr Lys Tyr
Gly Phe Tyr Ala Arg Thr Asp Ala Arg 340 345
350Gln Gly Val Leu Leu Val Ala Pro Trp Phe Lys Val Pro Tyr
Pro Phe 355 360 365Gln Trp Gly Leu
Pro Thr Val Ser Ala Ala Gly Val Ile Gly Met Leu 370
375 380Ser Ala Val Val Ala Ser Ile Ile Glu Ser Ile Gly
Asp Tyr Tyr Ala385 390 395
400Cys Ala Arg Leu Ser Cys Ala Pro Pro Pro Pro Ile His Ala Ile Asn
405 410 415Arg Gly Ile Phe Val
Glu Gly Leu Ser Cys Val Leu Asp Gly Ile Phe 420
425 430Gly Thr Gly Asn Gly Ser Thr Ser Ser Ser Pro Asn
Ile Gly Val Leu 435 440 445Gly Ile
Thr Lys Val Gly Ser Arg Arg Val Ile Gln Cys Gly Ala Ala 450
455 460Leu Met Leu Ala Leu Gly Met Ile Gly Lys Phe
Ser Ala Leu Phe Ala465 470 475
480Ser Leu Pro Asp Pro Val Leu Gly Ala Leu Phe Cys Thr Leu Phe Gly
485 490 495Met Ile Thr Ala
Val Gly Leu Ser Asn Leu Gln Phe Ile Asp Leu Asn 500
505 510Ser Ser Arg Asn Leu Phe Val Leu Gly Phe Ser
Ile Phe Phe Gly Leu 515 520 525Val
Leu Pro Ser Tyr Leu Arg Gln Asn Pro Leu Val Thr Gly Ile Thr 530
535 540Gly Ile Asp Gln Val Leu Asn Val Leu Leu
Thr Thr Ala Met Phe Val545 550 555
560Gly Gly Cys Val Ala Phe Ile Leu Asp Asn Thr Ile Pro Gly Thr
Pro 565 570 575Glu Glu Arg
Gly Ile Arg Lys Trp Lys Lys Gly Val Gly Lys Gly Asn 580
585 590Lys Ser Leu Asp Gly Met Glu Ser Tyr Asn
Leu Pro Phe Gly Met Asn 595 600
605Ile Ile Lys Lys Tyr Arg Cys Phe Ser Tyr Leu Pro Ile Ser Pro Thr 610
615 620Phe Val Gly Tyr Thr Trp Lys Gly
Leu Arg Lys Ser Asp Asn Ser Arg625 630
635 640Ser Ser Asp Glu Asp Ser Gln Ala Thr Gly
645 65037414PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 37Met Met Gly Ile Gly Lys Asn Thr Thr Ser Lys Ser Met Glu
Ala Gly1 5 10 15Ser Ser
Thr Glu Gly Lys Tyr Glu Asp Glu Ala Lys His Pro Ala Phe 20
25 30Phe Thr Leu Pro Val Val Ile Asn Gly
Gly Ala Thr Ser Ser Gly Glu 35 40
45Gln Asp Asn Glu Asp Thr Glu Leu Met Ala Ile Tyr Thr Thr Glu Asn 50
55 60Gly Ile Ala Glu Lys Ser Ser Leu Ala
Glu Thr Leu Asp Ser Thr Gly65 70 75
80Ser Leu Asp Pro Gln Arg Ser Asp Met Ile Tyr Thr Ile Glu
Asp Val 85 90 95Pro Pro
Trp Tyr Leu Cys Ile Phe Leu Gly Leu Gln His Tyr Leu Thr 100
105 110Cys Phe Ser Gly Thr Ile Ala Val Pro
Phe Leu Leu Ala Asp Ala Met 115 120
125Cys Val Gly Tyr Asp Gln Trp Ala Thr Ser Gln Leu Ile Gly Thr Ile
130 135 140Phe Phe Cys Val Gly Ile Thr
Thr Leu Leu Gln Thr Thr Phe Gly Cys145 150
155 160Arg Leu Pro Leu Phe Gln Thr Ser Ala Phe Ala Phe
Leu Ala Pro Ala 165 170
175Arg Ala Ile Leu Ser Leu Asp Lys Trp Lys Cys Asn Thr Thr Asp Val
180 185 190Ser Val Ala Asn Gly Thr
Ala Glu Leu Leu His Thr Glu His Ile Trp 195 200
205Tyr Pro Arg Ile Arg Glu Ile Gln Gly Ala Ile Ile Met Ser
Ser Leu 210 215 220Ile Glu Val Val Ile
Gly Leu Leu Gly Leu Pro Gly Ala Leu Leu Lys225 230
235 240Tyr Ile Gly Pro Leu Thr Ile Thr Pro Thr
Val Ala Leu Ile Gly Leu 245 250
255Ser Gly Phe Gln Ala Ala Gly Glu Arg Ala Gly Lys His Trp Gly Ile
260 265 270Ala Met Leu Thr Ile
Phe Leu Val Leu Leu Phe Ser Gln Tyr Ala Arg 275
280 285Asn Val Lys Phe Pro Leu Pro Ile Tyr Lys Ser Lys
Lys Gly Trp Thr 290 295 300Ala Tyr Lys
Leu Gln Leu Phe Lys Met Phe Pro Ile Ile Leu Ala Ile305
310 315 320Leu Val Ser Trp Leu Leu Cys
Phe Ile Phe Thr Val Thr Asp Val Phe 325
330 335Pro Pro Asp Ser Thr Lys Tyr Gly Phe Tyr Ala Arg
Thr Asp Ala Arg 340 345 350Gln
Gly Val Leu Leu Val Ala Pro Trp Phe Lys Val Pro Tyr Pro Phe 355
360 365Gln Trp Gly Leu Pro Thr Val Ser Ala
Ala Gly Val Ile Gly Met Leu 370 375
380Ser Ala Val Val Ala Ser Ile Ile Glu Ser Ile Gly Asp Tyr Tyr Ala385
390 395 400Cys Ala Arg Leu
Ser Cys Ala Pro Pro Pro Pro Ser Thr Gln 405
41038428PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 38Met Met Gly
Ile Gly Lys Asn Thr Thr Ser Lys Ser Met Glu Ala Gly1 5
10 15Ser Ser Thr Glu Gly Lys Tyr Glu Asp
Glu Ala Lys His Pro Ala Phe 20 25
30Phe Thr Leu Pro Val Val Ile Asn Gly Gly Ala Thr Ser Ser Gly Glu
35 40 45Gln Asp Asn Glu Asp Thr Glu
Leu Met Ala Ile Tyr Thr Thr Glu Asn 50 55
60Gly Ile Ala Glu Lys Ser Ser Leu Ala Glu Thr Leu Asp Ser Thr Gly65
70 75 80Ser Leu Asp Pro
Gln Arg Ser Asp Met Ile Tyr Thr Ile Glu Asp Val 85
90 95Pro Pro Trp Tyr Leu Cys Ile Phe Leu Gly
Leu Gln His Tyr Leu Thr 100 105
110Cys Phe Ser Gly Thr Ile Ala Val Pro Phe Leu Leu Ala Asp Ala Met
115 120 125Cys Val Gly Tyr Asp Gln Trp
Ala Thr Ser Gln Leu Ile Gly Thr Ile 130 135
140Phe Phe Cys Val Gly Ile Thr Thr Leu Leu Gln Thr Thr Phe Gly
Cys145 150 155 160Arg Leu
Pro Leu Phe Gln Thr Ser Ala Phe Ala Phe Leu Ala Pro Ala
165 170 175Arg Ala Ile Leu Ser Leu Asp
Lys Trp Lys Cys Asn Thr Thr Asp Val 180 185
190Ser Val Ala Asn Gly Thr Ala Glu Leu Leu His Thr Glu His
Ile Trp 195 200 205Tyr Pro Arg Ile
Arg Glu Ile Gln Gly Ala Ile Ile Met Ser Ser Leu 210
215 220Ile Glu Val Val Ile Gly Leu Leu Gly Leu Pro Gly
Ala Leu Leu Lys225 230 235
240Tyr Ile Gly Pro Leu Thr Ile Thr Pro Thr Val Ala Leu Ile Gly Leu
245 250 255Ser Gly Phe Gln Ala
Ala Gly Glu Arg Ala Gly Lys His Trp Gly Ile 260
265 270Ala Met Leu Thr Ile Phe Leu Val Leu Leu Phe Ser
Gln Tyr Ala Arg 275 280 285Asn Val
Lys Phe Pro Leu Pro Ile Tyr Lys Ser Lys Lys Gly Trp Thr 290
295 300Ala Tyr Lys Leu Gln Leu Phe Lys Met Phe Pro
Ile Ile Leu Ala Ile305 310 315
320Leu Val Ser Trp Leu Leu Cys Phe Ile Phe Thr Val Thr Asp Val Phe
325 330 335Pro Pro Asp Ser
Thr Lys Tyr Gly Phe Tyr Ala Arg Thr Asp Ala Arg 340
345 350Gln Gly Val Leu Leu Val Ala Pro Trp Phe Lys
Val Pro Tyr Pro Phe 355 360 365Gln
Trp Gly Leu Pro Thr Val Ser Ala Ala Gly Val Ile Gly Met Leu 370
375 380Ser Ala Val Val Ala Ser Ile Ile Glu Ser
Ile Gly Asp Tyr Tyr Ala385 390 395
400Cys Ala Arg Leu Ser Cys Ala Pro Pro Pro Pro His Pro Arg Asn
Lys 405 410 415Gln Gly Asn
Phe Arg Gly Arg Pro Leu Leu Cys Ser 420
42539807PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 39Met Pro Lys
Ala Pro Lys Gln Gln Pro Pro Glu Pro Glu Trp Ile Gly1 5
10 15Asp Gly Glu Ser Thr Ser Pro Ser Asp
Lys Val Val Lys Lys Gly Lys 20 25
30Lys Asp Lys Lys Ile Lys Lys Thr Phe Phe Glu Glu Leu Ala Val Glu
35 40 45Asp Lys Gln Ala Gly Glu Glu
Glu Lys Val Leu Lys Glu Lys Glu Gln 50 55
60Gln Gln Gln Gln Gln Gln Gln Gln Gln Lys Lys Lys Arg Asp Thr Arg65
70 75 80Lys Gly Arg Arg
Lys Lys Asp Val Asp Asp Asp Gly Glu Glu Lys Glu 85
90 95Leu Met Glu Arg Leu Lys Lys Leu Ser Val
Pro Thr Ser Asp Glu Glu 100 105
110Asp Glu Val Pro Ala Pro Lys Pro Arg Gly Gly Lys Lys Thr Lys Gly
115 120 125Gly Asn Val Phe Ala Ala Leu
Ile Gln Asp Gln Ser Glu Glu Glu Glu 130 135
140Glu Glu Glu Lys His Pro Pro Lys Pro Ala Lys Pro Glu Lys Asn
Arg145 150 155 160Ile Asn
Lys Ala Val Ser Glu Glu Gln Gln Pro Ala Leu Lys Gly Lys
165 170 175Lys Gly Lys Glu Glu Lys Ser
Lys Gly Lys Ala Lys Pro Gln Asn Lys 180 185
190Phe Ala Ala Leu Asp Asn Glu Glu Glu Asp Lys Glu Glu Glu
Ile Ile 195 200 205Lys Glu Lys Glu
Pro Pro Lys Gln Gly Lys Glu Lys Ala Lys Lys Ala 210
215 220Glu Gln Met Glu Tyr Glu Arg Gln Val Ala Ser Leu
Lys Ala Ala Asn225 230 235
240Ala Ala Glu Asn Asp Phe Ser Val Ser Gln Ala Glu Met Ser Ser Arg
245 250 255Gln Ala Met Leu Glu
Asn Ala Ser Asp Ile Lys Leu Glu Lys Phe Ser 260
265 270Ile Ser Ala His Gly Lys Glu Leu Phe Val Asn Ala
Asp Leu Tyr Ile 275 280 285Val Ala
Gly Arg Arg Tyr Gly Leu Val Gly Pro Asn Gly Lys Gly Lys 290
295 300Thr Thr Leu Leu Lys His Ile Ala Asn Arg Ala
Leu Ser Ile Pro Pro305 310 315
320Asn Ile Asp Val Leu Leu Cys Glu Gln Glu Val Val Ala Asp Glu Thr
325 330 335Pro Ala Val Gln
Ala Val Leu Arg Ala Asp Thr Lys Arg Leu Lys Leu 340
345 350Leu Glu Glu Glu Arg Arg Leu Gln Gly Gln Leu
Glu Gln Gly Asp Asp 355 360 365Thr
Ala Ala Glu Arg Leu Glu Lys Val Tyr Glu Glu Leu Arg Ala Thr 370
375 380Gly Ala Ala Ala Ala Glu Ala Lys Ala Arg
Arg Ile Leu Ala Gly Leu385 390 395
400Gly Phe Asp Pro Glu Met Gln Asn Arg Pro Thr Gln Lys Phe Ser
Gly 405 410 415Gly Trp Arg
Met Arg Val Ser Leu Ala Arg Ala Leu Phe Met Glu Pro 420
425 430Thr Leu Leu Met Leu Asp Glu Pro Thr Asn
His Leu Asp Leu Asn Ala 435 440
445Val Ile Trp Leu Asn Asn Tyr Leu Gln Gly Trp Arg Lys Thr Leu Leu 450
455 460Ile Val Ser His Asp Gln Gly Phe
Leu Asp Asp Val Cys Thr Asp Ile465 470
475 480Ile His Leu Asp Ala Gln Arg Leu His Tyr Tyr Arg
Gly Asn Tyr Met 485 490
495Thr Phe Lys Lys Met Tyr Gln Gln Lys Gln Lys Glu Leu Leu Lys Gln
500 505 510Tyr Glu Lys Gln Glu Lys
Lys Leu Lys Glu Leu Lys Ala Gly Gly Lys 515 520
525Ser Thr Lys Gln Ala Glu Lys Gln Thr Lys Glu Ala Leu Thr
Arg Lys 530 535 540Gln Gln Lys Cys Arg
Arg Lys Asn Gln Asp Glu Glu Ser Gln Glu Ala545 550
555 560Pro Glu Leu Leu Lys Arg Pro Lys Glu Tyr
Thr Val Arg Phe Thr Phe 565 570
575Pro Asp Pro Pro Pro Leu Ser Pro Pro Val Leu Gly Leu His Gly Val
580 585 590Thr Phe Gly Tyr Gln
Gly Gln Lys Pro Leu Phe Lys Asn Leu Asp Phe 595
600 605Gly Ile Asp Met Asp Ser Arg Ile Cys Ile Val Gly
Pro Asn Gly Val 610 615 620Gly Lys Ser
Thr Leu Leu Leu Leu Leu Thr Gly Lys Leu Thr Pro Thr625
630 635 640His Gly Glu Met Arg Lys Asn
His Arg Leu Lys Ile Gly Phe Phe Asn 645
650 655Gln Gln Tyr Ala Glu Gln Leu Arg Met Glu Glu Thr
Pro Thr Glu Tyr 660 665 670Leu
Gln Arg Gly Phe Asn Leu Pro Tyr Gln Asp Ala Arg Lys Cys Leu 675
680 685Gly Arg Phe Gly Leu Glu Ser His Ala
His Thr Ile Gln Ile Cys Lys 690 695
700Leu Ser Gly Gly Gln Lys Ala Arg Val Val Phe Ala Glu Leu Ala Cys705
710 715 720Arg Glu Pro Asp
Val Leu Ile Leu Asp Glu Pro Thr Asn Asn Leu Asp 725
730 735Ile Glu Ser Ile Asp Ala Leu Gly Glu Ala
Ile Asn Glu Tyr Lys Gly 740 745
750Ala Val Ile Val Val Ser His Asp Ala Arg Leu Ile Thr Glu Thr Asn
755 760 765Cys Gln Leu Trp Val Val Glu
Glu Gln Ser Val Ser Gln Ile Asp Gly 770 775
780Asp Phe Glu Asp Tyr Lys Arg Glu Val Leu Glu Ala Leu Gly Glu
Val785 790 795 800Met Val
Ser Arg Pro Arg Glu 80540134PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 40Met Pro Lys Ala Pro Lys Gln Gln Pro
Pro Glu Pro Glu Trp Ile Gly1 5 10
15Asp Gly Glu Ser Thr Ser Pro Ser Asp Lys Val Val Lys Lys Gly
Lys 20 25 30Lys Asp Lys Lys
Ile Lys Lys Thr Phe Phe Glu Glu Leu Ala Val Glu 35
40 45Asp Lys Gln Ala Gly Glu Glu Glu Lys Val Leu Lys
Glu Lys Glu Gln 50 55 60Gln Gln Gln
Gln Gln Gln Gln Gln Gln Lys Lys Ser Glu Ile Pro Glu65 70
75 80Lys Ala Gly Gly Arg Arg Met Trp
Met Met Met Glu Lys Arg Lys Ser 85 90
95Ser Trp Ser Val Leu Arg Ser Ser Gln Cys Gln Pro Val Met
Arg Arg 100 105 110Met Lys Tyr
Pro Pro Gln Asn Pro Ala Glu Gly Arg Lys Pro Arg Val 115
120 125Val Met Phe Leu Gln Pro
1304189PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 41Met Pro Lys
Ala Pro Lys Gln Gln Pro Pro Glu Pro Glu Trp Ile Gly1 5
10 15Asp Gly Glu Ser Thr Ser Pro Ser Asp
Lys Val Val Lys Lys Gly Lys 20 25
30Lys Asp Lys Lys Ile Lys Lys Thr Phe Phe Glu Glu Leu Ala Val Glu
35 40 45Asp Lys Gln Ala Gly Glu Glu
Glu Lys Val Leu Lys Glu Lys Glu Gln 50 55
60Gln Gln Gln Gln Gln Gln Gln Gln Gln Lys Lys Lys Ala Arg Tyr Pro65
70 75 80Lys Arg Gln Ala
Glu Glu Gly Cys Gly 8542286PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 42Ser Pro Asp Tyr Phe Pro Gln Ile Ser
Ser Gln Phe Gly Thr Val Glu1 5 10
15Lys Met Glu Lys Ile Phe Ile Ser Ser Ser Thr Lys Ala Glu Gly
Lys 20 25 30Gly Ile Ser Pro
Phe Glu Ala Pro Ile Asn Thr Gln Ala Pro Pro Glu 35
40 45Lys Gly Lys Glu Ala Val Val Gln Glu Pro Glu Arg
Ser Trp Phe Gln 50 55 60Thr Lys Glu
Glu Arg Lys Lys Glu Lys Ile Ala Lys Ala Leu Gln Glu65 70
75 80Phe Asp Leu Ala Leu Arg Gly Lys
Lys Lys Arg Lys Lys Phe Met Lys 85 90
95Asp Ala Lys Lys Lys Gly Glu Met Thr Ala Glu Glu Arg Ser
Gln Phe 100 105 110Glu Ile Leu
Lys Ala Gln Met Phe Ala Glu Arg Leu Ala Lys Arg Asn 115
120 125Arg Arg Ala Lys Arg Ala Arg Ala Met Pro Glu
Glu Glu Pro Val Arg 130 135 140Gly Pro
Ala Lys Lys Gln Lys Gln Gly Lys Lys Ser Val Phe Asp Glu145
150 155 160Glu Leu Thr Asn Thr Ser Lys
Lys Ala Leu Lys Gln Tyr Arg Ala Gly 165
170 175Pro Ser Phe Glu Glu Arg Lys Gln Leu Gly Leu Pro
His Gln Arg Arg 180 185 190Gly
Gly Asn Phe Lys Ser Asn Pro Asp Thr Arg Gly Gly Ser Ser Cys 195
200 205Arg Gly Leu Lys Lys Phe Met Gly Ala
Ala Leu Lys Ser Leu Pro Cys 210 215
220Gly Lys Ser Ser Trp Leu Val Cys Leu Phe Ser Ile Cys Leu Lys Lys225
230 235 240Lys Gln Lys Gln
Lys Thr Thr Leu Trp Cys Gly Gly Met Val Arg Ser 245
250 255Tyr Phe Pro Lys His Val Cys Gln Ser Pro
Phe Leu Leu Ile Ser Phe 260 265
270His Met Thr Ile Leu Asn Gly Ser Ile Phe Gly Lys Arg Glu 275
280 28543251PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 43Met Glu Lys Ile Phe Ile Ser Ser Ser
Thr Lys Ala Glu Gly Lys Gly1 5 10
15Ile Ser Pro Phe Glu Ala Pro Ile Asn Thr Gln Ala Pro Pro Glu
Lys 20 25 30Gly Lys Glu Ala
Val Val Gln Glu Pro Glu Arg Ser Trp Phe Gln Thr 35
40 45Lys Glu Glu Arg Lys Lys Glu Lys Ile Ala Lys Ala
Leu Gln Glu Phe 50 55 60Asp Leu Ala
Leu Arg Gly Lys Lys Lys Arg Lys Lys Phe Met Lys Asp65 70
75 80Ala Lys Lys Lys Gly Glu Met Thr
Ala Glu Glu Arg Ser Gln Phe Glu 85 90
95Ile Leu Lys Ala Gln Met Phe Ala Glu Arg Leu Ala Lys Arg
Asn Arg 100 105 110Arg Ala Lys
Arg Ala Arg Ala Met Pro Glu Glu Glu Pro Val Arg Gly 115
120 125Pro Ala Lys Lys Gln Lys Gln Gly Lys Lys Ser
Val Phe Asp Glu Glu 130 135 140Leu Thr
Asn Thr Ser Lys Lys Ala Leu Lys Gln Tyr Arg Ala Gly Pro145
150 155 160Ser Phe Glu Glu Arg Lys Gln
Leu Gly Leu Pro His Gln Arg Arg Gly 165
170 175Gly Asn Phe Lys Ser Asn Pro Asp Thr Arg Gly Gly
Ser Ser Cys Arg 180 185 190Gly
Leu Lys Lys Phe Met Gly Ala Ala Leu Lys Ser Leu Pro Cys Gly 195
200 205Lys Ser Ser Trp Leu Val Cys Leu Phe
Ser Ile Cys Leu Lys Lys Asn 210 215
220Lys Asn Lys Lys Gln His Phe Gly Val Val Val Trp Tyr Val Ala Ile225
230 235 240Phe Leu Ser Met
Ser Val Asn Leu Pro Ser Cys 245
25044238PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 44Met Glu Lys
Ile Phe Ile Ser Ser Ser Thr Lys Ala Glu Gly Lys Gly1 5
10 15Ile Ser Pro Phe Glu Ala Pro Ile Asn
Thr Gln Ala Pro Pro Glu Lys 20 25
30Gly Lys Glu Ala Val Val Gln Glu Pro Glu Arg Ser Trp Phe Gln Thr
35 40 45Lys Glu Glu Arg Lys Lys Glu
Lys Ile Ala Lys Ala Leu Gln Glu Phe 50 55
60Asp Leu Ala Leu Arg Gly Lys Lys Lys Arg Lys Lys Phe Met Lys Asp65
70 75 80Ala Lys Lys Lys
Gly Glu Met Thr Ala Glu Glu Arg Ser Gln Phe Glu 85
90 95Ile Leu Lys Ala Gln Met Phe Ala Glu Arg
Leu Ala Lys Arg Asn Arg 100 105
110Arg Ala Lys Arg Ala Arg Ala Met Pro Glu Glu Glu Pro Val Arg Gly
115 120 125Pro Ala Lys Lys Gln Lys Gln
Gly Lys Lys Ser Val Phe Asp Glu Glu 130 135
140Leu Thr Asn Thr Ser Lys Lys Ala Leu Lys Gln Tyr Arg Ala Gly
Pro145 150 155 160Ser Phe
Glu Glu Arg Lys Gln Leu Gly Leu Pro His Gln Arg Arg Gly
165 170 175Gly Asn Phe Lys Ser Asn Pro
Asp Thr Arg Gly Gly Ser Ser Cys Arg 180 185
190Gly Leu Lys Lys Phe Met Gly Ala Ala Leu Lys Ser Leu Pro
Cys Gly 195 200 205Lys Ser Ser Trp
Leu Val Cys Leu Phe Ser Ile Cys Leu Lys Lys Lys 210
215 220Thr Lys Thr Lys Asn Asn Thr Leu Val Trp Trp Tyr
Gly Thr225 230 23545192PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 45Met Asp Gly Ser Gly Glu Gln Pro Arg
Gly Gly Gly Pro Thr Ser Ser1 5 10
15Glu Gln Ile Met Lys Thr Gly Ala Leu Leu Leu Gln Gly Phe Ile
Gln 20 25 30Asp Arg Ala Gly
Arg Met Gly Gly Glu Ala Pro Glu Leu Ala Leu Asp 35
40 45Pro Val Pro Gln Asp Ala Ser Thr Lys Lys Leu Ser
Glu Cys Leu Lys 50 55 60Arg Ile Gly
Asp Glu Leu Asp Ser Asn Met Glu Leu Gln Arg Met Ile65 70
75 80Ala Ala Val Asp Thr Asp Ser Pro
Arg Glu Val Phe Phe Arg Val Ala 85 90
95Ala Asp Met Phe Ser Asp Gly Asn Phe Asn Trp Gly Arg Val
Val Ala 100 105 110Leu Phe Tyr
Phe Ala Ser Lys Leu Val Leu Lys Ala Leu Cys Thr Lys 115
120 125Val Pro Glu Leu Ile Arg Thr Ile Met Gly Trp
Thr Leu Asp Phe Leu 130 135 140Arg Glu
Arg Leu Leu Gly Trp Ile Gln Asp Gln Gly Gly Trp Asp Gly145
150 155 160Leu Leu Ser Tyr Phe Gly Thr
Pro Thr Trp Gln Thr Val Thr Ile Phe 165
170 175Val Ala Gly Val Leu Thr Ala Ser Leu Thr Ile Trp
Lys Lys Met Gly 180 185
1904658PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 46Met Asp Gly
Ser Gly Glu Gln Pro Arg Gly Gly Gly Pro Thr Ser Ser1 5
10 15Glu Gln Ile Met Lys Thr Gly Ala Leu
Leu Leu Gln Gly Phe Ile Gln 20 25
30Asp Arg Ala Gly Arg Met Gly Gly Arg His Pro Ser Trp Pro Trp Thr
35 40 45Arg Cys Leu Arg Met Arg Pro
Pro Arg Ser 50 554772PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 47Met Asp Gly Ser Gly Glu Gln Pro Arg
Gly Gly Gly Pro Thr Ser Ser1 5 10
15Glu Gln Ile Met Lys Thr Gly Ala Leu Leu Leu Gln Gly Phe Ile
Gln 20 25 30Asp Arg Ala Gly
Arg Met Gly Gly Gly Gly Thr Arg Ala Gly Pro Gly 35
40 45Pro Gly Ala Ser Gly Cys Val His Gln Glu Ala Glu
Arg Val Ser Gln 50 55 60Ala His Arg
Gly Arg Thr Gly Gln65 7048246PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 48Met Ala Phe Leu Arg Ser Met Trp Gly
Val Leu Ser Ala Leu Gly Arg1 5 10
15Ser Gly Ala Glu Leu Cys Thr Gly Cys Gly Ser Arg Leu Arg Ser
Pro 20 25 30Phe Ser Phe Val
Tyr Leu Pro Arg Trp Phe Ser Ser Val Leu Ala Ser 35
40 45Cys Pro Lys Lys Pro Val Ser Ser Tyr Leu Arg Phe
Ser Lys Glu Gln 50 55 60Leu Pro Ile
Phe Lys Ala Gln Asn Pro Asp Ala Lys Thr Thr Glu Leu65 70
75 80Ile Arg Arg Ile Ala Gln Arg Trp
Arg Glu Leu Pro Asp Ser Lys Lys 85 90
95Lys Ile Tyr Gln Asp Ala Tyr Arg Ala Glu Trp Gln Val Tyr
Lys Glu 100 105 110Glu Ile Ser
Arg Phe Lys Glu Gln Leu Thr Pro Ser Gln Ile Met Ser 115
120 125Leu Glu Lys Glu Ile Met Asp Lys His Leu Lys
Arg Lys Ala Met Thr 130 135 140Lys Lys
Lys Glu Leu Thr Leu Leu Gly Lys Pro Lys Arg Pro Arg Ser145
150 155 160Ala Tyr Asn Val Tyr Val Ala
Glu Arg Phe Gln Glu Ala Lys Gly Asp 165
170 175Ser Pro Gln Glu Lys Leu Lys Thr Val Lys Glu Asn
Trp Lys Asn Leu 180 185 190Ser
Asp Ser Glu Lys Glu Leu Tyr Ile Gln His Ala Lys Glu Asp Glu 195
200 205Thr Arg Tyr His Asn Glu Met Lys Ser
Trp Glu Glu Gln Met Ile Glu 210 215
220Val Gly Arg Lys Asp Leu Leu Arg Arg Thr Ile Lys Lys Gln Arg Lys225
230 235 240Tyr Gly Ala Glu
Glu Cys 24549148PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 49Met Ala Phe Leu Arg Ser Met Trp Gly Val Leu Ser Ala Leu
Gly Arg1 5 10 15Ser Gly
Ala Glu Leu Cys Thr Gly Cys Gly Ser Arg Leu Arg Ser Pro 20
25 30Phe Ser Phe Val Tyr Leu Pro Arg Trp
Phe Ser Ser Val Leu Ala Ser 35 40
45Cys Pro Lys Lys Pro Val Ser Ser Tyr Leu Arg Phe Ser Lys Glu Gln 50
55 60Leu Pro Ile Phe Lys Ala Gln Asn Pro
Asp Ala Lys Thr Thr Glu Leu65 70 75
80Ile Arg Arg Ile Ala Gln Arg Trp Arg Glu Leu Pro Asp Ser
Lys Lys 85 90 95Lys Ile
Tyr Gln Asp Ala Tyr Arg Ala Glu Trp Gln Val Tyr Lys Glu 100
105 110Glu Ile Ser Arg Phe Lys Glu Gln Leu
Thr Pro Ser Gln Ile Met Ser 115 120
125Leu Glu Lys Glu Ile Met Asp Lys His Leu Lys Arg Lys Ala Met Thr
130 135 140Lys Lys Lys
Ser14550162PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 50Met Ala Phe
Leu Arg Ser Met Trp Gly Val Leu Ser Ala Leu Gly Arg1 5
10 15Ser Gly Ala Glu Leu Cys Thr Gly Cys
Gly Ser Arg Leu Arg Ser Pro 20 25
30Phe Ser Phe Val Tyr Leu Pro Arg Trp Phe Ser Ser Val Leu Ala Ser
35 40 45Cys Pro Lys Lys Pro Val Ser
Ser Tyr Leu Arg Phe Ser Lys Glu Gln 50 55
60Leu Pro Ile Phe Lys Ala Gln Asn Pro Asp Ala Lys Thr Thr Glu Leu65
70 75 80Ile Arg Arg Ile
Ala Gln Arg Trp Arg Glu Leu Pro Asp Ser Lys Lys 85
90 95Lys Ile Tyr Gln Asp Ala Tyr Arg Ala Glu
Trp Gln Val Tyr Lys Glu 100 105
110Glu Ile Ser Arg Phe Lys Glu Gln Leu Thr Pro Ser Gln Ile Met Ser
115 120 125Leu Glu Lys Glu Ile Met Asp
Lys His Leu Lys Arg Lys Ala Met Thr 130 135
140Lys Lys Lys Arg Val Asn Thr Ala Trp Lys Thr Lys Lys Thr Ser
Phe145 150 155 160Ser
Leu51235PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 51Met Thr Val
Leu Ala Pro Ala Trp Ser Pro Thr Thr Tyr Leu Leu Leu1 5
10 15Leu Leu Leu Leu Ser Ser Gly Leu Ser
Gly Thr Gln Asp Cys Ser Phe 20 25
30Gln His Ser Pro Ile Ser Ser Asp Phe Ala Val Lys Ile Arg Glu Leu
35 40 45Ser Asp Tyr Leu Leu Gln Asp
Tyr Pro Val Thr Val Ala Ser Asn Leu 50 55
60Gln Asp Glu Glu Leu Cys Gly Gly Leu Trp Arg Leu Val Leu Ala Gln65
70 75 80Arg Trp Met Glu
Arg Leu Lys Thr Val Ala Gly Ser Lys Met Gln Gly 85
90 95Leu Leu Glu Arg Val Asn Thr Glu Ile His
Phe Val Thr Lys Cys Ala 100 105
110Phe Gln Pro Pro Pro Ser Cys Leu Arg Phe Val Gln Thr Asn Ile Ser
115 120 125Arg Leu Leu Gln Glu Thr Ser
Glu Gln Leu Val Ala Leu Lys Pro Trp 130 135
140Ile Thr Arg Gln Asn Phe Ser Arg Cys Leu Glu Leu Gln Cys Gln
Pro145 150 155 160Asp Ser
Ser Thr Leu Pro Pro Pro Trp Ser Pro Arg Pro Leu Glu Ala
165 170 175Thr Ala Pro Thr Ala Pro Gln
Pro Pro Leu Leu Leu Leu Leu Leu Leu 180 185
190Pro Val Gly Leu Leu Leu Leu Ala Ala Ala Trp Cys Leu His
Trp Gln 195 200 205Arg Thr Arg Arg
Arg Thr Pro Arg Pro Gly Glu Gln Val Pro Pro Val 210
215 220Pro Ser Pro Gln Asp Leu Leu Leu Val Glu His225
230 23552140PRTArtificial SequenceDescription
of Artificial Sequence polypeptides encoded by genes with coding
microsatellites 52Met Thr Val Leu Ala Pro Ala Trp Ser Pro Thr Thr Tyr Leu
Leu Leu1 5 10 15Leu Leu
Leu Leu Ser Ser Gly Leu Ser Gly Thr Gln Asp Cys Ser Phe 20
25 30Gln His Ser Pro Ile Ser Ser Asp Phe
Ala Val Lys Ile Arg Glu Leu 35 40
45Ser Asp Tyr Leu Leu Gln Asp Tyr Pro Val Thr Val Ala Ser Asn Leu 50
55 60Gln Asp Glu Glu Leu Cys Gly Gly Leu
Trp Arg Leu Val Leu Ala Gln65 70 75
80Arg Trp Met Glu Arg Leu Lys Thr Val Ala Gly Ser Lys Met
Gln Gly 85 90 95Leu Leu
Glu Arg Val Asn Thr Glu Ile His Phe Val Thr Lys Cys Ala 100
105 110Phe Gln Pro Pro Pro Ala Val Phe Ala
Ser Ser Arg Pro Thr Ser Pro 115 120
125Ala Ser Cys Arg Arg Pro Pro Ser Ser Trp Trp Arg 130
135 14053161PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 53Met Thr Val Leu Ala Pro Ala Trp Ser Pro Thr Thr Tyr Leu
Leu Leu1 5 10 15Leu Leu
Leu Leu Ser Ser Gly Leu Ser Gly Thr Gln Asp Cys Ser Phe 20
25 30Gln His Ser Pro Ile Ser Ser Asp Phe
Ala Val Lys Ile Arg Glu Leu 35 40
45Ser Asp Tyr Leu Leu Gln Asp Tyr Pro Val Thr Val Ala Ser Asn Leu 50
55 60Gln Asp Glu Glu Leu Cys Gly Gly Leu
Trp Arg Leu Val Leu Ala Gln65 70 75
80Arg Trp Met Glu Arg Leu Lys Thr Val Ala Gly Ser Lys Met
Gln Gly 85 90 95Leu Leu
Glu Arg Val Asn Thr Glu Ile His Phe Val Thr Lys Cys Ala 100
105 110Phe Gln Pro Pro Pro Gln Leu Ser Ser
Leu Arg Pro Asp Gln His Leu 115 120
125Pro Pro Pro Ala Gly Asp Leu Arg Ala Ala Gly Gly Ala Glu Ala Leu
130 135 140Asp His Ser Pro Glu Leu Leu
Pro Val Pro Gly Ala Ala Val Ser Ala145 150
155 160Arg54920PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 54Met Leu Gln Gly His Phe Trp Leu Val Arg Glu Gly Ile Met
Ile Ser1 5 10 15Pro Ser
Ser Pro Pro Pro Pro Asn Leu Phe Phe Phe Pro Leu Gln Ile 20
25 30Phe Pro Phe Pro Phe Thr Ser Phe Pro
Ser His Leu Leu Ser Leu Thr 35 40
45Pro Pro Lys Ala Cys Tyr Leu Lys Ala Ile Glu Thr Gln Pro Asn Phe 50
55 60Ala Val Ala Trp Ser Asn Leu Gly Cys
Val Phe Asn Ala Gln Gly Glu65 70 75
80Ile Trp Leu Ala Ile His His Phe Glu Lys Ala Val Thr Leu
Asp Pro 85 90 95Asn Phe
Leu Asp Ala Tyr Ile Asn Leu Gly Asn Val Leu Lys Glu Ala 100
105 110Arg Ile Phe Asp Arg Ala Val Ala Ala
Tyr Leu Arg Ala Leu Ser Leu 115 120
125Ser Pro Asn His Ala Val Val His Gly Asn Leu Ala Cys Val Tyr Tyr
130 135 140Glu Gln Gly Leu Ile Asp Leu
Ala Ile Asp Thr Tyr Arg Arg Ala Ile145 150
155 160Glu Leu Gln Pro His Phe Pro Asp Ala Tyr Cys Asn
Leu Ala Asn Ala 165 170
175Leu Lys Glu Lys Gly Ser Val Ala Glu Ala Glu Asp Cys Tyr Asn Thr
180 185 190Ala Leu Arg Leu Cys Pro
Thr His Ala Asp Ser Leu Asn Asn Leu Ala 195 200
205Asn Ile Lys Arg Glu Gln Gly Asn Ile Glu Glu Ala Val Arg
Leu Tyr 210 215 220Arg Lys Ala Leu Glu
Val Phe Pro Glu Phe Ala Ala Ala His Ser Asn225 230
235 240Leu Ala Ser Val Leu Gln Gln Gln Gly Lys
Leu Gln Glu Ala Leu Met 245 250
255His Tyr Lys Glu Ala Ile Arg Ile Ser Pro Thr Phe Ala Asp Ala Tyr
260 265 270Ser Asn Met Gly Asn
Thr Leu Lys Glu Met Gln Asp Val Gln Gly Ala 275
280 285Leu Gln Cys Tyr Thr Arg Ala Ile Gln Ile Asn Pro
Ala Phe Ala Asp 290 295 300Ala His Ser
Asn Leu Ala Ser Ile His Lys Asp Ser Gly Asn Ile Pro305
310 315 320Glu Ala Ile Ala Ser Tyr Arg
Thr Ala Leu Lys Leu Lys Pro Asp Phe 325
330 335Pro Asp Ala Tyr Cys Asn Leu Ala His Cys Leu Gln
Ile Val Cys Asp 340 345 350Trp
Thr Asp Tyr Asp Glu Arg Met Lys Lys Leu Val Ser Ile Val Ala 355
360 365Asp Gln Leu Glu Lys Asn Arg Leu Pro
Ser Val His Pro His His Ser 370 375
380Met Leu Tyr Pro Leu Ser His Gly Phe Arg Lys Ala Ile Ala Glu Arg385
390 395 400His Gly Asn Leu
Cys Leu Asp Lys Ile Asn Val Leu His Lys Pro Pro 405
410 415Tyr Glu His Pro Lys Asp Leu Lys Leu Ser
Asp Gly Arg Leu Arg Val 420 425
430Gly Tyr Val Ser Ser Asp Phe Gly Asn His Pro Thr Ser His Leu Met
435 440 445Gln Ser Ile Pro Gly Met His
Asn Pro Asp Lys Phe Glu Val Phe Cys 450 455
460Tyr Ala Leu Ser Pro Asp Asp Gly Thr Asn Phe Arg Val Lys Val
Met465 470 475 480Ala Glu
Ala Asn His Phe Ile Asp Leu Ser Gln Ile Pro Cys Asn Gly
485 490 495Lys Ala Ala Asp Arg Ile His
Gln Asp Gly Ile His Ile Leu Val Asn 500 505
510Met Asn Gly Tyr Thr Lys Gly Ala Arg Asn Glu Leu Phe Ala
Leu Arg 515 520 525Pro Ala Pro Ile
Gln Ala Met Trp Leu Gly Tyr Pro Gly Thr Ser Gly 530
535 540Ala Leu Phe Met Asp Tyr Ile Ile Thr Asp Gln Glu
Thr Ser Pro Ala545 550 555
560Glu Val Ala Glu Gln Tyr Ser Glu Lys Leu Ala Tyr Met Pro His Thr
565 570 575Phe Phe Ile Gly Asp
His Ala Asn Met Phe Pro His Leu Lys Lys Lys 580
585 590Ala Val Ile Asp Phe Lys Ser Asn Gly His Ile Tyr
Asp Asn Arg Ile 595 600 605Val Leu
Asn Gly Ile Asp Leu Lys Ala Phe Leu Asp Ser Leu Pro Asp 610
615 620Val Lys Ile Val Lys Met Lys Cys Pro Asp Gly
Gly Asp Asn Ala Asp625 630 635
640Ser Ser Asn Thr Ala Leu Asn Met Pro Val Ile Pro Met Asn Thr Ile
645 650 655Ala Glu Ala Val
Ile Glu Met Ile Asn Arg Gly Gln Ile Gln Ile Thr 660
665 670Ile Asn Gly Phe Ser Ile Ser Asn Gly Leu Ala
Thr Thr Gln Ile Asn 675 680 685Asn
Lys Ala Ala Thr Gly Glu Glu Val Pro Arg Thr Ile Ile Val Thr 690
695 700Thr Arg Ser Gln Tyr Gly Leu Pro Glu Asp
Ala Ile Val Tyr Cys Asn705 710 715
720Phe Asn Gln Leu Tyr Lys Ile Asp Pro Ser Thr Leu Gln Met Trp
Ala 725 730 735Asn Ile Leu
Lys Arg Val Pro Asn Ser Val Leu Trp Leu Leu Arg Phe 740
745 750Pro Ala Val Gly Glu Pro Asn Ile Gln Gln
Tyr Ala Gln Asn Met Gly 755 760
765Leu Pro Gln Asn Arg Ile Ile Phe Ser Pro Val Ala Pro Lys Glu Glu 770
775 780His Val Arg Arg Gly Gln Leu Ala
Asp Val Cys Leu Asp Thr Pro Leu785 790
795 800Cys Asn Gly His Thr Thr Gly Met Asp Val Leu Trp
Ala Gly Thr Pro 805 810
815Met Val Thr Met Pro Gly Glu Thr Leu Ala Ser Arg Val Ala Ala Ser
820 825 830Gln Leu Thr Cys Leu Gly
Cys Leu Glu Leu Ile Ala Lys Asn Arg Gln 835 840
845Glu Tyr Glu Asp Ile Ala Val Lys Leu Gly Thr Asp Leu Glu
Tyr Leu 850 855 860Lys Lys Val Arg Gly
Lys Val Trp Lys Gln Arg Ile Ser Ser Pro Leu865 870
875 880Phe Asn Thr Lys Gln Tyr Thr Met Glu Leu
Glu Arg Leu Tyr Leu Gln 885 890
895Met Trp Glu His Tyr Ala Ala Gly Asn Lys Pro Asp His Met Ile Lys
900 905 910Pro Val Glu Val Thr
Glu Ser Ala 915 9205546PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 55Met Leu Gln Gly His Phe Trp Leu Val
Arg Glu Gly Ile Met Ile Ser1 5 10
15Pro Ser Ser Pro Pro Pro Pro Asn Leu Phe Phe Ser Leu Tyr Lys
Phe 20 25 30Ser Pro Phe Pro
Leu Pro Pro Phe Pro Pro Ile Phe Phe His 35 40
455650PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
56Met Leu Gln Gly His Phe Trp Leu Val Arg Glu Gly Ile Met Ile Ser1
5 10 15Pro Ser Ser Pro Pro Pro
Pro Asn Leu Phe Phe Phe Pro Phe Thr Asn 20 25
30Phe Pro Leu Ser Leu Tyr Leu Leu Ser Leu Pro Ser Ser
Phe Ile Asn 35 40 45Pro Ser
5057350PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 57Met Glu Ser
Gln Val Gly Gly Gly Pro Ala Gly Arg Pro Ala Gln Arg1 5
10 15Pro Leu Leu Gly Thr Asn Gly Ala Thr
Asp Asp Ser Lys Thr Asn Leu 20 25
30Ile Val Asn Tyr Leu Pro Gln Asn Met Thr Gln Asp Glu Phe Lys Ser
35 40 45Leu Phe Gly Ser Ile Gly Asp
Ile Glu Ser Cys Lys Leu Val Arg Asp 50 55
60Lys Ile Thr Gly Gln Ser Leu Gly Tyr Gly Phe Val Asn Tyr Ser Asp65
70 75 80Pro Asn Asp Ala
Asp Lys Ala Ile Asn Thr Leu Asn Gly Leu Lys Leu 85
90 95Gln Thr Lys Thr Ile Lys Val Ser Tyr Ala
Arg Pro Ser Ser Ala Ser 100 105
110Ile Arg Asp Ala Asn Leu Tyr Val Ser Gly Leu Pro Lys Thr Met Ser
115 120 125Gln Lys Glu Met Glu Gln Leu
Phe Ser Gln Tyr Gly Arg Ile Ile Thr 130 135
140Ser Arg Ile Leu Val Asp Gln Val Thr Gly Val Ser Arg Gly Val
Gly145 150 155 160Phe Ile
Arg Phe Asp Lys Arg Ile Glu Ala Glu Glu Ala Ile Lys Gly
165 170 175Leu Asn Gly Gln Lys Pro Leu
Gly Ala Arg Glu Pro Ile Thr Val Lys 180 185
190Phe Ala Asn Asn Pro Ser Gln Lys Thr Gly Gln Ala Leu Leu
Thr His 195 200 205Leu Tyr Gln Ser
Ser Ala Arg Arg Tyr Ala Gly Pro Leu His His Gln 210
215 220Thr Gln Arg Phe Arg Leu Asp Asn Leu Leu Asn Met
Ala Tyr Ala Val225 230 235
240Lys Arg Phe Ser Pro Ile Ala Ile Asp Gly Met Ser Gly Leu Ala Gly
245 250 255Val Gly Leu Ser Gly
Gly Ala Ala Gly Gly Trp Cys Ile Phe Val Tyr 260
265 270Asn Leu Ser Pro Glu Pro Asp Gln Ser Val Leu Trp
Gln Leu Phe Gly 275 280 285Pro Phe
Gly Ala Val Thr Asn Val Lys Val Ile Arg Asp Phe Thr Thr 290
295 300Asn Lys Cys Lys Gly Phe Gly Phe Met Thr Met
Thr Asn Tyr Asp Glu305 310 315
320Ala Ala Met Ala Ile Ala Ser Leu Asn Gly Tyr Arg Leu Gly Gln Arg
325 330 335Val Leu Gln Val
Ser Phe Lys Thr Ser Lys Gln His Lys Ala 340
345 3505840PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 58Met Glu Ser Gln Val Gly Gly Ala Arg Pro Ala Gly Leu Pro
Asn Gly1 5 10 15His Ser
Leu Val Gln Met Glu Pro Leu Thr Thr Ala Arg Pro Thr Ser 20
25 30Ser Ser Thr Thr Cys Pro Arg Thr
35 405925PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
59Met Glu Ser Gln Val Gly Gly Gly Pro Gly Arg Pro Ala Cys Pro Thr1
5 10 15Ala Thr Pro Trp Tyr Lys
Trp Ser His 20 2560189PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 60Leu Phe Ser His Gln Arg Val Gln Ala
Gln Pro Thr Asp Tyr Gly Gly1 5 10
15Ser Phe Thr Arg Arg Cys Val Glu Trp Leu Leu Gly Leu Tyr Phe
Leu 20 25 30Ser His Ile Pro
Ile Thr Leu Phe Met Asp Leu Gln Ala Val Val Pro 35
40 45Arg Glu Leu Tyr Pro Val Glu Phe Arg Asn Leu Leu
Lys Trp Tyr Ala 50 55 60Lys Glu Phe
Lys Asp Pro Leu Leu Gln Glu Pro Pro Ala Trp Phe Lys65 70
75 80Ser Phe Leu Phe Cys Glu Leu Val
Phe Gln Leu Pro Phe Phe Pro Ile 85 90
95Ala Thr Tyr Ala Phe Leu Lys Gly Ser Cys Lys Trp Ile Arg
Thr Pro 100 105 110Ala Ile Ile
Tyr Ser Val His Thr Met Thr Thr Leu Ile Leu Ile Leu 115
120 125Ser Thr Phe Leu Phe Glu Asp Phe Ser Lys Ala
Ser Gly Phe Lys Gly 130 135 140Gln Arg
Pro Glu Thr Leu His Glu Arg Leu Thr Leu Val Ser Val Tyr145
150 155 160Ala Pro Tyr Leu Leu Ile Pro
Phe Ile Leu Leu Ile Phe Met Leu Arg 165
170 175Ser Pro Tyr Tyr Lys Tyr Glu Glu Lys Arg Lys Lys
Lys 180 18561251PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 61Leu Phe Ser His Gln Arg Val Gln Ala
Gln Pro Thr Asp Tyr Gly Gly1 5 10
15Ser Phe Thr Arg Arg Cys Val Glu Trp Leu Leu Gly Leu Tyr Phe
Leu 20 25 30Ser His Ile Pro
Ile Thr Leu Phe Met Asp Leu Gln Ala Val Val Pro 35
40 45Arg Glu Leu Tyr Pro Val Glu Phe Arg Asn Leu Leu
Lys Trp Tyr Ala 50 55 60Lys Glu Phe
Lys Asp Pro Leu Leu Gln Glu Pro Pro Ala Trp Phe Lys65 70
75 80Ser Phe Leu Phe Cys Glu Leu Val
Phe Gln Leu Pro Phe Phe Pro Ile 85 90
95Ala Thr Tyr Ala Phe Leu Lys Gly Ser Cys Lys Trp Ile Arg
Thr Pro 100 105 110Ala Ile Ile
Tyr Ser Val His Thr Met Thr Thr Leu Ile Leu Ile Leu 115
120 125Ser Thr Phe Leu Phe Glu Asp Phe Ser Lys Ala
Ser Gly Phe Lys Gly 130 135 140Gln Arg
Pro Glu Thr Leu His Glu Arg Leu Thr Leu Val Ser Val Tyr145
150 155 160Ala Pro Tyr Leu Leu Ile Pro
Phe Ile Leu Leu Ile Phe Met Leu Arg 165
170 175Ser Pro Tyr Tyr Lys Tyr Glu Glu Lys Arg Lys Lys
Asn Glu Gly Asn 180 185 190Asn
His Trp Pro Arg Val Glu Met Pro Thr Gly Trp Leu Leu Val Gly 195
200 205Tyr Ile Gln Glu His Cys Ser Glu Pro
Thr Ser Ser Ala Ala Phe Glu 210 215
220Thr Leu Ala Ala Met His Lys Ser Lys Met Val Ser Gly Thr Met Ser225
230 235 240Asn Pro His Leu
Leu Pro Phe Phe Phe Phe Phe 245
25062198PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 62Leu Phe Ser
His Gln Arg Val Gln Ala Gln Pro Thr Asp Tyr Gly Gly1 5
10 15Ser Phe Thr Arg Arg Cys Val Glu Trp
Leu Leu Gly Leu Tyr Phe Leu 20 25
30Ser His Ile Pro Ile Thr Leu Phe Met Asp Leu Gln Ala Val Val Pro
35 40 45Arg Glu Leu Tyr Pro Val Glu
Phe Arg Asn Leu Leu Lys Trp Tyr Ala 50 55
60Lys Glu Phe Lys Asp Pro Leu Leu Gln Glu Pro Pro Ala Trp Phe Lys65
70 75 80Ser Phe Leu Phe
Cys Glu Leu Val Phe Gln Leu Pro Phe Phe Pro Ile 85
90 95Ala Thr Tyr Ala Phe Leu Lys Gly Ser Cys
Lys Trp Ile Arg Thr Pro 100 105
110Ala Ile Ile Tyr Ser Val His Thr Met Thr Thr Leu Ile Leu Ile Leu
115 120 125Ser Thr Phe Leu Phe Glu Asp
Phe Ser Lys Ala Ser Gly Phe Lys Gly 130 135
140Gln Arg Pro Glu Thr Leu His Glu Arg Leu Thr Leu Val Ser Val
Tyr145 150 155 160Ala Pro
Tyr Leu Leu Ile Pro Phe Ile Leu Leu Ile Phe Met Leu Arg
165 170 175Ser Pro Tyr Tyr Lys Tyr Glu
Glu Lys Arg Lys Lys Lys Met Lys Glu 180 185
190Thr Thr Thr Gly Pro Gly 195631232PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 63Met Ala Asn Gly Val Ile Pro Pro Pro
Gly Gly Ala Ser Pro Leu Pro1 5 10
15Gln Val Arg Val Pro Leu Glu Glu Pro Pro Leu Ser Pro Asp Val
Glu 20 25 30Glu Glu Asp Asp
Asp Leu Gly Lys Thr Leu Ala Val Ser Arg Phe Gly 35
40 45Asp Leu Ile Ser Lys Pro Pro Ala Trp Asp Pro Glu
Lys Pro Ser Arg 50 55 60Ser Tyr Ser
Glu Arg Asp Phe Glu Phe His Arg His Thr Ser His His65 70
75 80Thr His His Pro Leu Ser Ala Arg
Leu Pro Pro Pro His Lys Leu Arg 85 90
95Arg Leu Pro Pro Thr Ser Ala Arg His Thr Arg Arg Lys Arg
Lys Lys 100 105 110Glu Lys Thr
Ser Ala Pro Pro Ser Glu Gly Thr Pro Pro Ile Gln Glu 115
120 125Glu Gly Gly Ala Gly Val Asp Glu Glu Glu Glu
Glu Glu Glu Glu Glu 130 135 140Glu Gly
Glu Ser Glu Ala Glu Pro Val Glu Pro Pro Pro Ser Gly Thr145
150 155 160Pro Gln Lys Ala Lys Phe Ser
Ile Gly Ser Asp Glu Asp Asp Ser Pro 165
170 175Gly Leu Pro Gly Arg Ala Ala Val Thr Lys Pro Leu
Pro Ser Val Gly 180 185 190Pro
His Thr Asp Lys Ser Pro Gln His Ser Ser Ser Ser Pro Ser Pro 195
200 205Arg Ala Arg Ala Ser Arg Leu Ala Gly
Glu Lys Ser Arg Pro Trp Ser 210 215
220Pro Ser Ala Ser Tyr Asp Leu Arg Glu Arg Leu Cys Pro Gly Ser Ala225
230 235 240Leu Gly Asn Pro
Gly Gly Pro Glu Gln Gln Val Pro Thr Asp Glu Ala 245
250 255Glu Ala Gln Met Leu Gly Ser Ala Asp Leu
Asp Asp Met Lys Ser His 260 265
270Arg Leu Glu Asp Asn Pro Gly Val Arg Arg His Leu Val Lys Lys Pro
275 280 285Ser Arg Thr Gln Gly Gly Arg
Gly Ser Pro Ser Gly Leu Ala Pro Ile 290 295
300Leu Arg Arg Lys Lys Lys Lys Lys Lys Leu Asp Arg Arg Pro His
Glu305 310 315 320Val Phe
Val Glu Leu Asn Glu Leu Met Leu Asp Arg Ser Gln Glu Pro
325 330 335His Trp Arg Glu Thr Ala Arg
Trp Ile Lys Phe Glu Glu Asp Val Glu 340 345
350Glu Glu Thr Glu Arg Trp Gly Lys Pro His Val Ala Ser Leu
Ser Phe 355 360 365Arg Ser Leu Leu
Glu Leu Arg Arg Thr Ile Ala His Gly Ala Ala Leu 370
375 380Leu Asp Leu Glu Gln Thr Thr Leu Pro Gly Ile Ala
His Leu Val Val385 390 395
400Glu Thr Met Ile Val Ser Asp Gln Ile Arg Pro Glu Asp Arg Ala Ser
405 410 415Val Leu Arg Thr Leu
Leu Leu Lys His Ser His Pro Asn Asp Asp Lys 420
425 430Asp Ser Gly Phe Phe Pro Arg Asn Pro Ser Ser Ser
Ser Met Asn Ser 435 440 445Val Leu
Gly Asn His His Pro Thr Pro Ser His Gly Pro Asp Gly Ala 450
455 460Val Pro Thr Met Ala Asp Asp Leu Gly Glu Pro
Ala Pro Leu Trp Pro465 470 475
480His Asp Pro Asp Ala Lys Glu Lys Pro Leu His Met Pro Gly Gly Asp
485 490 495Gly His Arg Gly
Lys Ser Leu Lys Leu Leu Glu Lys Ile Pro Glu Asp 500
505 510Ala Glu Ala Thr Val Val Leu Val Gly Cys Val
Pro Phe Leu Glu Gln 515 520 525Pro
Ala Ala Ala Phe Val Arg Leu Asn Glu Ala Val Leu Leu Glu Ser 530
535 540Val Leu Glu Val Pro Val Pro Val Arg Phe
Leu Phe Val Met Leu Gly545 550 555
560Pro Ser His Thr Ser Thr Asp Tyr His Glu Leu Gly Arg Ser Ile
Ala 565 570 575Thr Leu Met
Ser Asp Lys Leu Phe His Glu Ala Ala Tyr Gln Ala Asp 580
585 590Asp Arg Gln Asp Leu Leu Ser Ala Ile Ser
Glu Phe Leu Asp Gly Ser 595 600
605Ile Val Ile Pro Pro Ser Glu Val Glu Gly Arg Asp Leu Leu Arg Ser 610
615 620Val Ala Ala Phe Gln Arg Glu Leu
Leu Arg Lys Arg Arg Glu Arg Glu625 630
635 640Gln Thr Lys Val Glu Met Thr Thr Arg Gly Gly Tyr
Thr Ala Pro Gly 645 650
655Lys Glu Leu Ser Leu Glu Leu Gly Gly Ser Glu Ala Thr Pro Glu Asp
660 665 670Asp Pro Leu Leu Arg Thr
Gly Ser Val Phe Gly Gly Leu Val Arg Asp 675 680
685Val Arg Arg Arg Tyr Pro His Tyr Pro Ser Asp Leu Arg Asp
Ala Leu 690 695 700His Ser Gln Cys Val
Ala Ala Val Leu Phe Ile Tyr Phe Ala Ala Leu705 710
715 720Ser Pro Ala Ile Thr Phe Gly Gly Leu Leu
Gly Glu Lys Thr Glu Gly 725 730
735Leu Met Gly Val Ser Glu Leu Ile Val Ser Thr Ala Val Leu Gly Val
740 745 750Leu Phe Ser Leu Leu
Gly Ala Gln Pro Leu Leu Val Val Gly Phe Ser 755
760 765Gly Pro Leu Leu Val Phe Glu Glu Ala Phe Phe Lys
Phe Cys Arg Ala 770 775 780Gln Asp Leu
Glu Tyr Leu Thr Gly Arg Val Trp Val Gly Leu Trp Leu785
790 795 800Val Val Phe Val Leu Ala Leu
Val Ala Ala Glu Gly Ser Phe Leu Val 805
810 815Arg Tyr Ile Ser Pro Phe Thr Gln Glu Ile Phe Ala
Phe Leu Ile Ser 820 825 830Leu
Ile Phe Ile Tyr Glu Thr Phe Tyr Lys Leu Tyr Lys Val Phe Thr 835
840 845Glu His Pro Leu Leu Pro Phe Tyr Pro
Pro Glu Gly Ala Leu Glu Gly 850 855
860Ser Leu Ala Ala Gly Leu Glu Pro Asn Gly Ser Ala Leu Pro Pro Thr865
870 875 880Glu Gly Pro Pro
Ser Pro Arg Asn Gln Pro Asn Thr Ala Leu Leu Ser 885
890 895Leu Ile Leu Met Leu Gly Thr Phe Phe Ile
Ala Phe Phe Leu Arg Lys 900 905
910Phe Arg Asn Ser Arg Phe Leu Gly Gly Lys Ala Arg Arg Ile Ile Gly
915 920 925Asp Phe Gly Ile Pro Ile Ser
Ile Leu Val Met Val Leu Val Asp Tyr 930 935
940Ser Ile Thr Asp Thr Tyr Thr Gln Lys Leu Thr Val Pro Thr Gly
Leu945 950 955 960Ser Val
Thr Ser Pro Asp Lys Arg Ser Trp Phe Ile Pro Pro Leu Gly
965 970 975Ser Ala Arg Pro Phe Pro Pro
Trp Met Met Val Ala Ala Ala Val Pro 980 985
990Ala Leu Leu Val Leu Ile Leu Ile Phe Met Glu Thr Gln Ile
Thr Ala 995 1000 1005Leu Ile Val
Ser Gln Lys Ala Arg Arg Leu Leu Lys Gly Ser Gly 1010
1015 1020Phe His Leu Asp Leu Leu Leu Ile Gly Ser Leu
Gly Gly Leu Cys 1025 1030 1035Gly Leu
Phe Gly Leu Pro Trp Leu Thr Ala Ala Thr Val Arg Ser 1040
1045 1050Val Thr His Val Asn Ala Leu Thr Val Met
Arg Thr Ala Ile Ala 1055 1060 1065Pro
Gly Asp Lys Pro Gln Ile Gln Glu Val Arg Glu Gln Arg Val 1070
1075 1080Thr Gly Val Leu Ile Ala Ser Leu Val
Gly Leu Ser Ile Val Met 1085 1090
1095Gly Ala Val Leu Arg Arg Ile Pro Leu Ala Val Leu Phe Gly Ile
1100 1105 1110Phe Leu Tyr Met Gly Val
Thr Ser Leu Ser Gly Ile Gln Leu Ser 1115 1120
1125Gln Arg Leu Leu Leu Ile Leu Met Pro Ala Lys His His Pro
Glu 1130 1135 1140Gln Pro Tyr Val Thr
Lys Val Lys Thr Trp Arg Met His Leu Phe 1145 1150
1155Thr Cys Ile Gln Leu Gly Cys Ile Ala Leu Leu Trp Val
Val Lys 1160 1165 1170Ser Thr Ala Ala
Ser Leu Ala Phe Pro Phe Leu Leu Leu Leu Thr 1175
1180 1185Val Pro Leu Arg His Cys Leu Leu Pro Arg Leu
Phe Gln Asp Arg 1190 1195 1200Glu Leu
Gln Ala Leu Asp Ser Glu Asp Ala Glu Pro Asn Phe Asp 1205
1210 1215Glu Asp Gly Gln Asp Glu Tyr Asn Glu Leu
His Met Pro Val 1220 1225
123064268PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 64Met Ala Asn
Gly Val Ile Pro Pro Pro Gly Gly Ala Ser Pro Leu Pro1 5
10 15Gln Val Arg Val Pro Leu Glu Glu Pro
Pro Leu Ser Pro Asp Val Glu 20 25
30Glu Glu Asp Asp Asp Leu Gly Lys Thr Leu Ala Val Ser Arg Phe Gly
35 40 45Asp Leu Ile Ser Lys Pro Pro
Ala Trp Asp Pro Glu Lys Pro Ser Arg 50 55
60Ser Tyr Ser Glu Arg Asp Phe Glu Phe His Arg His Thr Ser His His65
70 75 80Thr His His Pro
Leu Ser Ala Arg Leu Pro Pro Pro His Lys Leu Arg 85
90 95Arg Leu Pro Pro Thr Ser Ala Arg His Thr
Arg Arg Lys Arg Lys Lys 100 105
110Glu Lys Thr Ser Ala Pro Pro Ser Glu Gly Thr Pro Pro Ile Gln Glu
115 120 125Glu Gly Gly Ala Gly Val Asp
Glu Glu Glu Glu Glu Glu Glu Glu Glu 130 135
140Glu Gly Glu Ser Glu Ala Glu Pro Val Glu Pro Pro Pro Gln Gly
Pro145 150 155 160His Arg
Arg Gln Ser Ser Pro Leu Glu Val Thr Arg Met Thr Val Gln
165 170 175Ala Ser Leu Gly Gly Leu Leu
Ser Pro Ser Pro Cys Pro Arg Trp Ala 180 185
190His Thr Leu Thr Arg Ala Pro Ser Thr Pro Ala Ala Pro Pro
Ala Pro 195 200 205Gly Pro Gly Pro
Pro Asp Ser Leu Gly Arg Lys Ala Gly Pro Gly Ala 210
215 220His Arg Pro Val Met Thr Cys Gly Ser Asp Cys Ala
Gln Ala Val Pro225 230 235
240Trp Ala Thr Gln Val Val Gln Ser Ser Arg Cys Pro Gln Met Arg Arg
245 250 255Arg Pro Arg Cys Trp
Val Leu Gln Thr Trp Thr Thr 260
26565170PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 65Met Ala Asn
Gly Val Ile Pro Pro Pro Gly Gly Ala Ser Pro Leu Pro1 5
10 15Gln Val Arg Val Pro Leu Glu Glu Pro
Pro Leu Ser Pro Asp Val Glu 20 25
30Glu Glu Asp Asp Asp Leu Gly Lys Thr Leu Ala Val Ser Arg Phe Gly
35 40 45Asp Leu Ile Ser Lys Pro Pro
Ala Trp Asp Pro Glu Lys Pro Ser Arg 50 55
60Ser Tyr Ser Glu Arg Asp Phe Glu Phe His Arg His Thr Ser His His65
70 75 80Thr His His Pro
Leu Ser Ala Arg Leu Pro Pro Pro His Lys Leu Arg 85
90 95Arg Leu Pro Pro Thr Ser Ala Arg His Thr
Arg Arg Lys Arg Lys Lys 100 105
110Glu Lys Thr Ser Ala Pro Pro Ser Glu Gly Thr Pro Pro Ile Gln Glu
115 120 125Glu Gly Gly Ala Gly Val Asp
Glu Glu Glu Glu Glu Glu Glu Glu Glu 130 135
140Glu Gly Glu Ser Glu Ala Glu Pro Val Glu Pro Pro Pro Leu Arg
Asp145 150 155 160Pro Thr
Glu Gly Lys Val Leu His Trp Lys 165
17066686PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 66Met Ala Gly
Ser Gly Ala Gly Val Arg Cys Ser Leu Leu Arg Leu Gln1 5
10 15Glu Thr Leu Ser Ala Ala Asp Arg Cys
Gly Ala Ala Leu Ala Gly His 20 25
30Gln Leu Ile Arg Gly Leu Gly Gln Glu Cys Val Leu Ser Ser Ser Pro
35 40 45Ala Val Leu Ala Leu Gln Thr
Ser Leu Val Phe Ser Arg Asp Phe Gly 50 55
60Leu Leu Val Phe Val Arg Lys Ser Leu Asn Ser Ile Glu Phe Arg Glu65
70 75 80Cys Arg Glu Glu
Ile Leu Lys Phe Leu Cys Ile Phe Leu Glu Lys Met 85
90 95Gly Gln Lys Ile Ala Pro Tyr Ser Val Glu
Ile Lys Asn Thr Cys Thr 100 105
110Ser Val Tyr Thr Lys Asp Arg Ala Ala Lys Cys Lys Ile Pro Ala Leu
115 120 125Asp Leu Leu Ile Lys Leu Leu
Gln Thr Phe Arg Ser Ser Arg Leu Met 130 135
140Asp Glu Phe Lys Ile Gly Glu Leu Phe Ser Lys Phe Tyr Gly Glu
Leu145 150 155 160Ala Leu
Lys Lys Lys Ile Pro Asp Thr Val Leu Glu Lys Val Tyr Glu
165 170 175Leu Leu Gly Leu Leu Gly Glu
Val His Pro Ser Glu Met Ile Asn Asn 180 185
190Ala Glu Asn Leu Phe Arg Ala Phe Leu Gly Glu Leu Lys Thr
Gln Met 195 200 205Thr Ser Ala Val
Arg Glu Pro Lys Leu Pro Val Leu Ala Gly Cys Leu 210
215 220Lys Gly Leu Ser Ser Leu Leu Cys Asn Phe Thr Lys
Ser Met Glu Glu225 230 235
240Asp Pro Gln Thr Ser Arg Glu Ile Phe Asn Phe Val Leu Lys Ala Ile
245 250 255Arg Pro Gln Ile Asp
Leu Lys Arg Tyr Ala Val Pro Ser Ala Gly Leu 260
265 270Arg Leu Phe Ala Leu His Ala Ser Gln Phe Ser Thr
Cys Leu Leu Asp 275 280 285Asn Tyr
Val Ser Leu Phe Glu Val Leu Leu Lys Trp Cys Ala His Thr 290
295 300Asn Val Glu Leu Lys Lys Ala Ala Leu Ser Ala
Leu Glu Ser Phe Leu305 310 315
320Lys Gln Val Ser Asn Met Val Ala Lys Asn Ala Glu Met His Lys Asn
325 330 335Lys Leu Gln Tyr
Phe Met Glu Gln Phe Tyr Gly Ile Ile Arg Asn Val 340
345 350Asp Ser Asn Asn Lys Glu Leu Ser Ile Ala Ile
Arg Gly Tyr Gly Leu 355 360 365Phe
Ala Gly Pro Cys Lys Val Ile Asn Ala Lys Asp Val Asp Phe Met 370
375 380Tyr Val Glu Leu Ile Gln Arg Cys Lys Gln
Met Phe Leu Thr Gln Thr385 390 395
400Asp Thr Gly Asp Asp Arg Val Tyr Gln Met Pro Ser Phe Leu Gln
Ser 405 410 415Val Ala Ser
Val Leu Leu Tyr Leu Asp Thr Val Pro Glu Val Tyr Thr 420
425 430Pro Val Leu Glu His Leu Val Val Met Gln
Ile Asp Ser Phe Pro Gln 435 440
445Tyr Ser Pro Lys Met Gln Leu Val Cys Cys Arg Ala Ile Val Lys Val 450
455 460Phe Leu Ala Leu Ala Ala Lys Gly
Pro Val Leu Arg Asn Cys Ile Ser465 470
475 480Thr Val Val His Gln Gly Leu Ile Arg Ile Cys Ser
Lys Pro Val Val 485 490
495Leu Pro Lys Gly Pro Glu Ser Glu Ser Glu Asp His Arg Ala Ser Gly
500 505 510Glu Val Arg Thr Gly Lys
Trp Lys Val Pro Thr Tyr Lys Asp Tyr Val 515 520
525Asp Leu Phe Arg His Leu Leu Ser Ser Asp Gln Met Met Asp
Ser Ile 530 535 540Leu Ala Asp Glu Ala
Phe Phe Ser Val Asn Ser Ser Ser Glu Ser Leu545 550
555 560Asn His Leu Leu Tyr Asp Glu Phe Val Lys
Ser Val Leu Lys Ile Val 565 570
575Glu Lys Leu Asp Leu Thr Leu Glu Ile Gln Thr Val Gly Glu Gln Glu
580 585 590Asn Gly Asp Glu Ala
Pro Gly Val Trp Met Ile Pro Thr Ser Asp Pro 595
600 605Ala Ala Asn Leu His Pro Ala Lys Pro Lys Asp Phe
Ser Ala Phe Ile 610 615 620Asn Leu Val
Glu Phe Cys Arg Glu Ile Leu Pro Glu Lys Gln Ala Glu625
630 635 640Phe Phe Glu Pro Trp Val Tyr
Ser Phe Ser Tyr Glu Leu Ile Leu Gln 645
650 655Ser Thr Arg Leu Pro Leu Ile Ser Gly Phe Tyr Lys
Leu Leu Ser Ile 660 665 670Thr
Val Arg Asn Ala Lys Lys Ile Lys Tyr Phe Glu Gly Ser 675
680 68567170PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 67Met Ala Gly Ser Gly Ala Gly Val Arg Cys Ser Leu Leu Arg
Leu Gln1 5 10 15Glu Thr
Leu Ser Ala Ala Asp Arg Cys Gly Ala Ala Leu Ala Gly His 20
25 30Gln Leu Ile Arg Gly Leu Gly Gln Glu
Cys Val Leu Ser Ser Ser Pro 35 40
45Ala Val Leu Ala Leu Gln Thr Ser Leu Val Phe Ser Arg Asp Phe Gly 50
55 60Leu Leu Val Phe Val Arg Lys Ser Leu
Asn Ser Ile Glu Phe Arg Glu65 70 75
80Cys Arg Glu Glu Ile Leu Lys Phe Leu Cys Ile Phe Leu Glu
Lys Met 85 90 95Gly Gln
Lys Ile Ala Pro Tyr Ser Val Glu Ile Lys Asn Thr Cys Thr 100
105 110Ser Val Tyr Thr Lys Asp Arg Ala Ala
Lys Cys Lys Ile Pro Ala Leu 115 120
125Asp Leu Leu Ile Lys Leu Leu Gln Thr Phe Arg Ser Ser Arg Leu Met
130 135 140Asp Glu Phe Lys Ile Gly Glu
Leu Phe Ser Lys Phe Tyr Gly Glu Leu145 150
155 160Ala Leu Lys Lys Lys Tyr Gln Ile Gln Phe
165 17068175PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 68Met Ala Gly Ser Gly Ala Gly Val Arg Cys Ser Leu Leu Arg
Leu Gln1 5 10 15Glu Thr
Leu Ser Ala Ala Asp Arg Cys Gly Ala Ala Leu Ala Gly His 20
25 30Gln Leu Ile Arg Gly Leu Gly Gln Glu
Cys Val Leu Ser Ser Ser Pro 35 40
45Ala Val Leu Ala Leu Gln Thr Ser Leu Val Phe Ser Arg Asp Phe Gly 50
55 60Leu Leu Val Phe Val Arg Lys Ser Leu
Asn Ser Ile Glu Phe Arg Glu65 70 75
80Cys Arg Glu Glu Ile Leu Lys Phe Leu Cys Ile Phe Leu Glu
Lys Met 85 90 95Gly Gln
Lys Ile Ala Pro Tyr Ser Val Glu Ile Lys Asn Thr Cys Thr 100
105 110Ser Val Tyr Thr Lys Asp Arg Ala Ala
Lys Cys Lys Ile Pro Ala Leu 115 120
125Asp Leu Leu Ile Lys Leu Leu Gln Thr Phe Arg Ser Ser Arg Leu Met
130 135 140Asp Glu Phe Lys Ile Gly Glu
Leu Phe Ser Lys Phe Tyr Gly Glu Leu145 150
155 160Ala Leu Lys Lys Lys Asn Thr Arg Tyr Ser Phe Arg
Lys Ser Ile 165 170
17569648PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 69Met Ser Ala
Ser Ala Ser Val Gly Gly Pro Val Pro Gln Pro Pro Pro1 5
10 15Gly Pro Ala Ala Ala Leu Pro Pro Gly
Ser Ala Ala Arg Ala Leu His 20 25
30Val Glu Leu Pro Ser Gln Gln Arg Arg Leu Arg His Leu Arg Asn Ile
35 40 45Ala Ala Arg Asn Ile Val Asn
Arg Asn Gly His Gln Leu Leu Asp Thr 50 55
60Tyr Phe Thr Leu His Leu Cys Ser Thr Glu Lys Ile Tyr Lys Glu Phe65
70 75 80Tyr Arg Ser Glu
Val Ile Lys Asn Ser Leu Asn Pro Thr Trp Arg Ser 85
90 95Leu Asp Phe Gly Ile Met Pro Asp Arg Leu
Asp Thr Ser Val Ser Cys 100 105
110Phe Val Val Lys Ile Trp Gly Gly Lys Glu Asn Ile Tyr Gln Leu Leu
115 120 125Ile Glu Trp Lys Val Cys Leu
Asp Gly Leu Lys Tyr Leu Gly Gln Gln 130 135
140Ile His Ala Arg Asn Gln Asn Glu Ile Ile Phe Gly Leu Asn Asp
Gly145 150 155 160Tyr Tyr
Gly Ala Pro Phe Glu His Lys Gly Tyr Ser Asn Ala Gln Lys
165 170 175Thr Ile Leu Leu Gln Val Asp
Gln Asn Cys Val Arg Asn Ser Tyr Asp 180 185
190Val Phe Ser Leu Leu Arg Leu His Arg Ala Gln Cys Ala Ile
Lys Gln 195 200 205Thr Gln Val Thr
Val Gln Lys Ile Gly Lys Glu Ile Glu Glu Lys Leu 210
215 220Arg Leu Thr Ser Thr Ser Asn Glu Leu Lys Lys Lys
Ser Glu Cys Leu225 230 235
240Gln Leu Lys Ile Leu Val Leu Gln Asn Glu Leu Glu Arg Gln Lys Lys
245 250 255Ala Leu Gly Arg Glu
Val Ala Leu Leu His Lys Gln Gln Ile Ala Leu 260
265 270Gln Asp Lys Gly Ser Ala Phe Ser Ala Glu His Leu
Lys Leu Gln Leu 275 280 285Gln Lys
Glu Ser Leu Asn Glu Leu Arg Lys Glu Cys Thr Ala Lys Arg 290
295 300Glu Leu Phe Leu Lys Thr Asn Ala Gln Leu Thr
Ile Arg Cys Arg Gln305 310 315
320Leu Leu Ser Glu Leu Ser Tyr Ile Tyr Pro Ile Asp Leu Asn Glu His
325 330 335Lys Asp Tyr Phe
Val Cys Gly Val Lys Leu Pro Asn Ser Glu Asp Phe 340
345 350Gln Ala Lys Asp Asp Gly Ser Ile Ala Val Ala
Leu Gly Tyr Thr Ala 355 360 365His
Leu Val Ser Met Ile Ser Phe Phe Leu Gln Val Pro Leu Arg Tyr 370
375 380Pro Ile Ile His Lys Gly Ser Arg Ser Thr
Ile Lys Asp Asn Ile Asn385 390 395
400Asp Lys Leu Thr Glu Lys Glu Arg Glu Phe Pro Leu Tyr Pro Lys
Gly 405 410 415Gly Glu Lys
Leu Gln Phe Asp Tyr Gly Val Tyr Leu Leu Asn Lys Asn 420
425 430Ile Ala Gln Leu Arg Tyr Gln His Gly Leu
Gly Thr Pro Asp Leu Arg 435 440
445Gln Thr Leu Pro Asn Leu Lys Asn Phe Met Glu His Gly Leu Met Val 450
455 460Arg Cys Asp Arg His His Thr Ser
Ser Ala Ile Pro Val Pro Lys Arg465 470
475 480Gln Ser Ser Ile Phe Gly Gly Ala Asp Val Gly Phe
Ser Gly Gly Ile 485 490
495Pro Ser Pro Asp Lys Gly His Arg Lys Arg Ala Ser Ser Glu Asn Glu
500 505 510Arg Leu Gln Tyr Lys Thr
Pro Pro Pro Ser Tyr Asn Ser Ala Leu Ala 515 520
525Gln Pro Val Thr Thr Val Pro Ser Met Gly Glu Thr Glu Arg
Lys Ile 530 535 540Thr Ser Leu Ser Ser
Ser Leu Asp Thr Ser Leu Asp Phe Ser Lys Glu545 550
555 560Asn Lys Lys Lys Gly Glu Asp Leu Val Gly
Ser Leu Asn Gly Gly His 565 570
575Ala Asn Val His Pro Ser Gln Glu Gln Gly Glu Ala Leu Ser Gly His
580 585 590Arg Ala Thr Val Asn
Gly Thr Leu Leu Pro Ser Glu Gln Ala Gly Ser 595
600 605Ala Ser Val Gln Leu Pro Gly Glu Phe His Pro Val
Ser Glu Ala Glu 610 615 620Leu Cys Cys
Thr Val Glu Gln Ala Glu Glu Ile Ile Gly Leu Glu Ala625
630 635 640Gln Val Ser Pro Gln Val Ile
Ser 64570241PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 70Met Ser Ala Ser Ala Ser Val Gly Gly Pro Val Pro Gln Pro
Pro Pro1 5 10 15Gly Pro
Ala Ala Ala Leu Pro Pro Gly Ser Ala Ala Arg Ala Leu His 20
25 30Val Glu Leu Pro Ser Gln Gln Arg Arg
Leu Arg His Leu Arg Asn Ile 35 40
45Ala Ala Arg Asn Ile Val Asn Arg Asn Gly His Gln Leu Leu Asp Thr 50
55 60Tyr Phe Thr Leu His Leu Cys Ser Thr
Glu Lys Ile Tyr Lys Glu Phe65 70 75
80Tyr Arg Ser Glu Val Ile Lys Asn Ser Leu Asn Pro Thr Trp
Arg Ser 85 90 95Leu Asp
Phe Gly Ile Met Pro Asp Arg Leu Asp Thr Ser Val Ser Cys 100
105 110Phe Val Val Lys Ile Trp Gly Gly Lys
Glu Asn Ile Tyr Gln Leu Leu 115 120
125Ile Glu Trp Lys Val Cys Leu Asp Gly Leu Lys Tyr Leu Gly Gln Gln
130 135 140Ile His Ala Arg Asn Gln Asn
Glu Ile Ile Phe Gly Leu Asn Asp Gly145 150
155 160Tyr Tyr Gly Ala Pro Phe Glu His Lys Gly Tyr Ser
Asn Ala Gln Lys 165 170
175Thr Ile Leu Leu Gln Val Asp Gln Asn Cys Val Arg Asn Ser Tyr Asp
180 185 190Val Phe Ser Leu Leu Arg
Leu His Arg Ala Gln Cys Ala Ile Lys Gln 195 200
205Thr Gln Val Thr Val Gln Lys Ile Gly Lys Glu Ile Glu Glu
Lys Leu 210 215 220Arg Leu Thr Ser Thr
Ser Asn Glu Leu Lys Lys Lys Val Asn Ala Cys225 230
235 240Ser71237PRTArtificial SequenceDescription
of Artificial Sequence polypeptides encoded by genes with coding
microsatellites 71Met Ser Ala Ser Ala Ser Val Gly Gly Pro Val Pro Gln Pro
Pro Pro1 5 10 15Gly Pro
Ala Ala Ala Leu Pro Pro Gly Ser Ala Ala Arg Ala Leu His 20
25 30Val Glu Leu Pro Ser Gln Gln Arg Arg
Leu Arg His Leu Arg Asn Ile 35 40
45Ala Ala Arg Asn Ile Val Asn Arg Asn Gly His Gln Leu Leu Asp Thr 50
55 60Tyr Phe Thr Leu His Leu Cys Ser Thr
Glu Lys Ile Tyr Lys Glu Phe65 70 75
80Tyr Arg Ser Glu Val Ile Lys Asn Ser Leu Asn Pro Thr Trp
Arg Ser 85 90 95Leu Asp
Phe Gly Ile Met Pro Asp Arg Leu Asp Thr Ser Val Ser Cys 100
105 110Phe Val Val Lys Ile Trp Gly Gly Lys
Glu Asn Ile Tyr Gln Leu Leu 115 120
125Ile Glu Trp Lys Val Cys Leu Asp Gly Leu Lys Tyr Leu Gly Gln Gln
130 135 140Ile His Ala Arg Asn Gln Asn
Glu Ile Ile Phe Gly Leu Asn Asp Gly145 150
155 160Tyr Tyr Gly Ala Pro Phe Glu His Lys Gly Tyr Ser
Asn Ala Gln Lys 165 170
175Thr Ile Leu Leu Gln Val Asp Gln Asn Cys Val Arg Asn Ser Tyr Asp
180 185 190Val Phe Ser Leu Leu Arg
Leu His Arg Ala Gln Cys Ala Ile Lys Gln 195 200
205Thr Gln Val Thr Val Gln Lys Ile Gly Lys Glu Ile Glu Glu
Lys Leu 210 215 220Arg Leu Thr Ser Thr
Ser Asn Glu Leu Lys Lys Lys Lys225 230
235721137PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 72Met Ser Arg
Arg Lys Pro Ala Ser Gly Gly Leu Ala Ala Ser Ser Ser1 5
10 15Ala Pro Ala Arg Gln Ala Val Leu Ser
Arg Phe Phe Gln Ser Thr Gly 20 25
30Ser Leu Lys Ser Thr Ser Ser Ser Thr Gly Ala Ala Asp Gln Val Asp
35 40 45Pro Gly Ala Ala Ala Ala Ala
Ala Ala Ala Ala Ala Ala Ala Pro Pro 50 55
60Ala Pro Pro Ala Pro Ala Phe Pro Pro Gln Leu Pro Pro His Val Ala65
70 75 80Thr Glu Ile Asp
Arg Arg Lys Lys Arg Pro Leu Glu Asn Asp Gly Pro 85
90 95Val Lys Lys Lys Val Lys Lys Val Gln Gln
Lys Glu Gly Gly Ser Asp 100 105
110Leu Gly Met Ser Gly Asn Ser Glu Pro Lys Lys Cys Leu Arg Thr Arg
115 120 125Asn Val Ser Lys Ser Leu Glu
Lys Leu Lys Glu Phe Cys Cys Asp Ser 130 135
140Ala Leu Pro Gln Ser Arg Val Gln Thr Glu Ser Leu Gln Glu Arg
Phe145 150 155 160Ala Val
Leu Pro Lys Cys Thr Asp Phe Asp Asp Ile Ser Leu Leu His
165 170 175Ala Lys Asn Ala Val Ser Ser
Glu Asp Ser Lys Arg Gln Ile Asn Gln 180 185
190Lys Asp Thr Thr Leu Phe Asp Leu Ser Gln Phe Gly Ser Ser
Asn Thr 195 200 205Ser His Glu Asn
Leu Gln Lys Thr Ala Ser Lys Ser Ala Asn Lys Arg 210
215 220Ser Lys Ser Ile Tyr Thr Pro Leu Glu Leu Gln Tyr
Ile Glu Met Lys225 230 235
240Gln Gln His Lys Asp Ala Val Leu Cys Val Glu Cys Gly Tyr Lys Tyr
245 250 255Arg Phe Phe Gly Glu
Asp Ala Glu Ile Ala Ala Arg Glu Leu Asn Ile 260
265 270Tyr Cys His Leu Asp His Asn Phe Met Thr Ala Ser
Ile Pro Thr His 275 280 285Arg Leu
Phe Val His Val Arg Arg Leu Val Ala Lys Gly Tyr Lys Val 290
295 300Gly Val Val Lys Gln Thr Glu Thr Ala Ala Leu
Lys Ala Ile Gly Asp305 310 315
320Asn Arg Ser Ser Leu Phe Ser Arg Lys Leu Thr Ala Leu Tyr Thr Lys
325 330 335Ser Thr Leu Ile
Gly Glu Asp Val Asn Pro Leu Ile Lys Leu Asp Asp 340
345 350Ala Val Asn Val Asp Glu Ile Met Thr Asp Thr
Ser Thr Ser Tyr Leu 355 360 365Leu
Cys Ile Ser Glu Asn Lys Glu Asn Val Arg Asp Lys Lys Lys Gly 370
375 380Asn Ile Phe Ile Gly Ile Val Gly Val Gln
Pro Ala Thr Gly Glu Val385 390 395
400Val Phe Asp Ser Phe Gln Asp Ser Ala Ser Arg Ser Glu Leu Glu
Thr 405 410 415Arg Met Ser
Ser Leu Gln Pro Val Glu Leu Leu Leu Pro Ser Ala Leu 420
425 430Ser Glu Gln Thr Glu Ala Leu Ile His Arg
Ala Thr Ser Val Ser Val 435 440
445Gln Asp Asp Arg Ile Arg Val Glu Arg Met Asp Asn Ile Tyr Phe Glu 450
455 460Tyr Ser His Ala Phe Gln Ala Val
Thr Glu Phe Tyr Ala Lys Asp Thr465 470
475 480Val Asp Ile Lys Gly Ser Gln Ile Ile Ser Gly Ile
Val Asn Leu Glu 485 490
495Lys Pro Val Ile Cys Ser Leu Ala Ala Ile Ile Lys Tyr Leu Lys Glu
500 505 510Phe Asn Leu Glu Lys Met
Leu Ser Lys Pro Glu Asn Phe Lys Gln Leu 515 520
525Ser Ser Lys Met Glu Phe Met Thr Ile Asn Gly Thr Thr Leu
Arg Asn 530 535 540Leu Glu Ile Leu Gln
Asn Gln Thr Asp Met Lys Thr Lys Gly Ser Leu545 550
555 560Leu Trp Val Leu Asp His Thr Lys Thr Ser
Phe Gly Arg Arg Lys Leu 565 570
575Lys Lys Trp Val Thr Gln Pro Leu Leu Lys Leu Arg Glu Ile Asn Ala
580 585 590Arg Leu Asp Ala Val
Ser Glu Val Leu His Ser Glu Ser Ser Val Phe 595
600 605Gly Gln Ile Glu Asn His Leu Arg Lys Leu Pro Asp
Ile Gly Arg Gly 610 615 620Leu Cys Ser
Ile Tyr His Lys Lys Cys Ser Thr Gln Glu Phe Phe Leu625
630 635 640Ile Val Lys Thr Leu Tyr His
Leu Lys Ser Glu Phe Gln Ala Ile Ile 645
650 655Pro Ala Val Asn Ser His Ile Gln Ser Asp Leu Leu
Arg Thr Val Ile 660 665 670Leu
Glu Ile Pro Glu Leu Leu Ser Pro Val Glu His Tyr Leu Lys Ile 675
680 685Leu Asn Glu Gln Ala Ala Lys Val Gly
Asp Lys Thr Glu Leu Phe Lys 690 695
700Asp Leu Ser Asp Phe Pro Leu Ile Lys Lys Arg Lys Asp Glu Ile Gln705
710 715 720Gly Val Ile Asp
Glu Ile Arg Met His Leu Gln Glu Ile Arg Lys Ile 725
730 735Leu Lys Asn Pro Ser Ala Gln Tyr Val Thr
Val Ser Gly Gln Glu Phe 740 745
750Met Ile Glu Ile Lys Asn Ser Ala Val Ser Cys Ile Pro Thr Asp Trp
755 760 765Val Lys Val Gly Ser Thr Lys
Ala Val Ser Arg Phe His Ser Pro Phe 770 775
780Ile Val Glu Asn Tyr Arg His Leu Asn Gln Leu Arg Glu Gln Leu
Val785 790 795 800Leu Asp
Cys Ser Ala Glu Trp Leu Asp Phe Leu Glu Lys Phe Ser Glu
805 810 815His Tyr His Ser Leu Cys Lys
Ala Val His His Leu Ala Thr Val Asp 820 825
830Cys Ile Phe Ser Leu Ala Lys Val Ala Lys Gln Gly Asp Tyr
Cys Arg 835 840 845Pro Thr Val Gln
Glu Glu Arg Lys Ile Val Ile Lys Asn Gly Arg His 850
855 860Pro Val Ile Asp Val Leu Leu Gly Glu Gln Asp Gln
Tyr Val Pro Asn865 870 875
880Asn Thr Asp Leu Ser Glu Asp Ser Glu Arg Val Met Ile Ile Thr Gly
885 890 895Pro Asn Met Gly Gly
Lys Ser Ser Tyr Ile Lys Gln Val Ala Leu Ile 900
905 910Thr Ile Met Ala Gln Ile Gly Ser Tyr Val Pro Ala
Glu Glu Ala Thr 915 920 925Ile Gly
Ile Val Asp Gly Ile Phe Thr Arg Met Gly Ala Ala Asp Asn 930
935 940Ile Tyr Lys Gly Arg Ser Thr Phe Met Glu Glu
Leu Thr Asp Thr Ala945 950 955
960Glu Ile Ile Arg Lys Ala Thr Ser Gln Ser Leu Val Ile Leu Asp Glu
965 970 975Leu Gly Arg Gly
Thr Ser Thr His Asp Gly Ile Ala Ile Ala Tyr Ala 980
985 990Thr Leu Glu Tyr Phe Ile Arg Asp Val Lys Ser
Leu Thr Leu Phe Val 995 1000
1005Thr His Tyr Pro Pro Val Cys Glu Leu Glu Lys Asn Tyr Ser His
1010 1015 1020Gln Val Gly Asn Tyr His
Met Gly Phe Leu Val Ser Glu Asp Glu 1025 1030
1035Ser Lys Leu Asp Pro Gly Thr Ala Glu Gln Val Pro Asp Phe
Val 1040 1045 1050Thr Phe Leu Tyr Gln
Ile Thr Arg Gly Ile Ala Ala Arg Ser Tyr 1055 1060
1065Gly Leu Asn Val Ala Lys Leu Ala Asp Val Pro Gly Glu
Ile Leu 1070 1075 1080Lys Lys Ala Ala
His Lys Ser Lys Glu Leu Glu Gly Leu Ile Asn 1085
1090 1095Thr Lys Arg Lys Arg Leu Lys Tyr Phe Ala Lys
Leu Trp Thr Met 1100 1105 1110His Asn
Ala Gln Asp Leu Gln Lys Trp Thr Glu Glu Phe Asn Met 1115
1120 1125Glu Glu Thr Gln Thr Ser Leu Leu His
1130 113573413PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 73Met Ser Arg Arg Lys Pro Ala Ser Gly Gly Leu Ala Ala Ser
Ser Ser1 5 10 15Ala Pro
Ala Arg Gln Ala Val Leu Ser Arg Phe Phe Gln Ser Thr Gly 20
25 30Ser Leu Lys Ser Thr Ser Ser Ser Thr
Gly Ala Ala Asp Gln Val Asp 35 40
45Pro Gly Ala Ala Ala Ala Ala Ala Ala Ala Ala Ala Ala Ala Pro Pro 50
55 60Ala Pro Pro Ala Pro Ala Phe Pro Pro
Gln Leu Pro Pro His Val Ala65 70 75
80Thr Glu Ile Asp Arg Arg Lys Lys Arg Pro Leu Glu Asn Asp
Gly Pro 85 90 95Val Lys
Lys Lys Val Lys Lys Val Gln Gln Lys Glu Gly Gly Ser Asp 100
105 110Leu Gly Met Ser Gly Asn Ser Glu Pro
Lys Lys Cys Leu Arg Thr Arg 115 120
125Asn Val Ser Lys Ser Leu Glu Lys Leu Lys Glu Phe Cys Cys Asp Ser
130 135 140Ala Leu Pro Gln Ser Arg Val
Gln Thr Glu Ser Leu Gln Glu Arg Phe145 150
155 160Ala Val Leu Pro Lys Cys Thr Asp Phe Asp Asp Ile
Ser Leu Leu His 165 170
175Ala Lys Asn Ala Val Ser Ser Glu Asp Ser Lys Arg Gln Ile Asn Gln
180 185 190Lys Asp Thr Thr Leu Phe
Asp Leu Ser Gln Phe Gly Ser Ser Asn Thr 195 200
205Ser His Glu Asn Leu Gln Lys Thr Ala Ser Lys Ser Ala Asn
Lys Arg 210 215 220Ser Lys Ser Ile Tyr
Thr Pro Leu Glu Leu Gln Tyr Ile Glu Met Lys225 230
235 240Gln Gln His Lys Asp Ala Val Leu Cys Val
Glu Cys Gly Tyr Lys Tyr 245 250
255Arg Phe Phe Gly Glu Asp Ala Glu Ile Ala Ala Arg Glu Leu Asn Ile
260 265 270Tyr Cys His Leu Asp
His Asn Phe Met Thr Ala Ser Ile Pro Thr His 275
280 285Arg Leu Phe Val His Val Arg Arg Leu Val Ala Lys
Gly Tyr Lys Val 290 295 300Gly Val Val
Lys Gln Thr Glu Thr Ala Ala Leu Lys Ala Ile Gly Asp305
310 315 320Asn Arg Ser Ser Leu Phe Ser
Arg Lys Leu Thr Ala Leu Tyr Thr Lys 325
330 335Ser Thr Leu Ile Gly Glu Asp Val Asn Pro Leu Ile
Lys Leu Asp Asp 340 345 350Ala
Val Asn Val Asp Glu Ile Met Thr Asp Thr Ser Thr Ser Tyr Leu 355
360 365Leu Cys Ile Ser Glu Asn Lys Glu Asn
Val Arg Asp Lys Lys Arg Ala 370 375
380Thr Phe Leu Leu Ala Leu Trp Glu Cys Ser Leu Pro Gln Ala Arg Leu385
390 395 400Cys Leu Ile Val
Ser Arg Thr Leu Leu Leu Val Gln Ser 405
41074402PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 74Met Ser Arg
Arg Lys Pro Ala Ser Gly Gly Leu Ala Ala Ser Ser Ser1 5
10 15Ala Pro Ala Arg Gln Ala Val Leu Ser
Arg Phe Phe Gln Ser Thr Gly 20 25
30Ser Leu Lys Ser Thr Ser Ser Ser Thr Gly Ala Ala Asp Gln Val Asp
35 40 45Pro Gly Ala Ala Ala Ala Ala
Ala Ala Ala Ala Ala Ala Ala Pro Pro 50 55
60Ala Pro Pro Ala Pro Ala Phe Pro Pro Gln Leu Pro Pro His Val Ala65
70 75 80Thr Glu Ile Asp
Arg Arg Lys Lys Arg Pro Leu Glu Asn Asp Gly Pro 85
90 95Val Lys Lys Lys Val Lys Lys Val Gln Gln
Lys Glu Gly Gly Ser Asp 100 105
110Leu Gly Met Ser Gly Asn Ser Glu Pro Lys Lys Cys Leu Arg Thr Arg
115 120 125Asn Val Ser Lys Ser Leu Glu
Lys Leu Lys Glu Phe Cys Cys Asp Ser 130 135
140Ala Leu Pro Gln Ser Arg Val Gln Thr Glu Ser Leu Gln Glu Arg
Phe145 150 155 160Ala Val
Leu Pro Lys Cys Thr Asp Phe Asp Asp Ile Ser Leu Leu His
165 170 175Ala Lys Asn Ala Val Ser Ser
Glu Asp Ser Lys Arg Gln Ile Asn Gln 180 185
190Lys Asp Thr Thr Leu Phe Asp Leu Ser Gln Phe Gly Ser Ser
Asn Thr 195 200 205Ser His Glu Asn
Leu Gln Lys Thr Ala Ser Lys Ser Ala Asn Lys Arg 210
215 220Ser Lys Ser Ile Tyr Thr Pro Leu Glu Leu Gln Tyr
Ile Glu Met Lys225 230 235
240Gln Gln His Lys Asp Ala Val Leu Cys Val Glu Cys Gly Tyr Lys Tyr
245 250 255Arg Phe Phe Gly Glu
Asp Ala Glu Ile Ala Ala Arg Glu Leu Asn Ile 260
265 270Tyr Cys His Leu Asp His Asn Phe Met Thr Ala Ser
Ile Pro Thr His 275 280 285Arg Leu
Phe Val His Val Arg Arg Leu Val Ala Lys Gly Tyr Lys Val 290
295 300Gly Val Val Lys Gln Thr Glu Thr Ala Ala Leu
Lys Ala Ile Gly Asp305 310 315
320Asn Arg Ser Ser Leu Phe Ser Arg Lys Leu Thr Ala Leu Tyr Thr Lys
325 330 335Ser Thr Leu Ile
Gly Glu Asp Val Asn Pro Leu Ile Lys Leu Asp Asp 340
345 350Ala Val Asn Val Asp Glu Ile Met Thr Asp Thr
Ser Thr Ser Tyr Leu 355 360 365Leu
Cys Ile Ser Glu Asn Lys Glu Asn Val Arg Asp Lys Lys Lys Gly 370
375 380Gln His Phe Tyr Trp His Cys Gly Ser Ala
Ala Cys His Arg Arg Gly385 390 395
400Cys Val759PRTArtificial SequenceDescription of Artificial
Sequence Frameshift Peptide 75Ser Leu Val Arg Leu Ser Ser Cys Val1
5769PRTArtificial SequenceDescription of Artificial Sequence
Frameshift Peptide 76Arg Leu Ser Ser Cys Val Pro Val Ala1
5779PRTArtificial SequenceDescription of Artificial Sequence
Frameshift Peptide 77Cys Val Pro Val Ala Leu Met Ser Ala1
57810PRTArtificial SequenceDescription of Artificial Sequence
Frameshift Peptide 78Leu Leu His Ser Ala Pro Thr Pro Ser Leu1
5 10799PRTArtificial SequenceDescription of
Artificial Sequence Frameshift Peptide 79Phe Leu Ser Ala Ser His Phe
Leu Leu1 5809PRTArtificial SequenceDescription of
Artificial Sequence Frameshift Peptide 80Arg Val Phe Phe Phe Tyr Gln
His Leu1 58110PRTArtificial SequenceDescription of
Artificial Sequence Frameshift Peptide 81Ser Leu Tyr Lys Phe Ser Pro
Phe Pro Leu1 5 10829PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 82Lys
Ile Phe Thr Phe Phe Phe Gln Leu1 5839PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 83Ala
Leu Leu Pro Ala Gly Pro Leu Thr1 58410PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 84Leu
Leu Pro Ala Gly Pro Leu Thr Gln Thr1 5
10859PRTArtificial SequenceDescription of Artificial Sequence Frameshift
Peptide 85Thr Leu Ser Pro Gly Trp Ser Ala Val1
58610PRTArtificial SequenceDescription of Artificial Sequence Frameshift
Peptide 86Ile Leu Leu Pro Gln Pro Pro Glu Trp Leu1 5
108710PRTArtificial SequenceDescription of Artificial
Sequence Frameshift Peptide 87Arg Gln Met Glu Ser Leu Gly Met Lys
Leu1 5 10889PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 88Val
Glu Met Pro Thr Gly Trp Leu Leu1 58910PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 89Val
Glu Met Pro Thr Gly Trp Leu Leu Val1 5
10909PRTArtificial SequenceDescription of Artificial Sequence Frameshift
Peptide 90Phe Gln Pro Pro Pro Ala Val Phe Ala1
59110PRTArtificial SequenceDescription of Artificial Sequence Frameshift
Peptide 91Ala Leu Trp Glu Cys Ser Leu Pro Gln Ala1 5
109210PRTArtificial SequenceDescription of Artificial
Sequence Frameshift Peptide 92Phe Leu Leu Ala Leu Trp Glu Cys Ser
Leu1 5 10939PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 93Leu
Leu Ala Leu Trp Glu Cys Ser Leu1 5949PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 94Ser
Leu Pro Gln Ala Arg Leu Cys Leu1 5959PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 95Leu
Ile Val Ser Arg Thr Leu Leu Leu1 5969PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 96Cys
Leu Ile Val Ser Arg Thr Leu Leu1 5979PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 97Ile
Val Ser Arg Thr Leu Leu Leu Val1 5989PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 98Lys
Arg Ala Thr Phe Leu Leu Ala Leu1 5999PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 99Lys
Met Phe Phe Met Val Phe Leu Ile1 51009PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 100Phe
Leu Ile Ile Trp Gln Asn Thr Met1 51019PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 101Gly
Met Cys Val Lys Val Ser Ser Ile1 51029PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 102Val
Leu Arg Thr Glu Gly Glu Pro Leu1 510310PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 103Leu
Ile Val Ser Arg Thr Leu Leu Leu Val1 5
1010410PRTArtificial SequenceDescription of Artificial Sequence
Frameshift Peptide 104Ser Leu Pro Gln Ala Arg Leu Cys Leu Ile1
5 1010510PRTArtificial SequenceDescription of
Artificial Sequence Frameshift Peptide 105Cys Leu Ile Val Ser Arg
Thr Leu Leu Leu1 5 1010610PRTArtificial
SequenceDescription of Artificial Sequence Frameshift Peptide 106Arg
Leu Cys Leu Ile Val Ser Arg Thr Leu1 5
10107513PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 107Met Gly Ala
Ala Ala Lys Leu Ala Phe Ala Val Phe Leu Ile Ser Cys1 5
10 15Ser Ser Gly Ala Ile Leu Gly Arg Ser
Glu Thr Gln Glu Cys Leu Phe 20 25
30Phe Asn Ala Asn Trp Glu Lys Asp Arg Thr Asn Gln Thr Gly Val Glu
35 40 45Pro Cys Tyr Gly Asp Lys Asp
Lys Arg Arg His Cys Phe Ala Thr Trp 50 55
60Lys Asn Ile Ser Gly Ser Ile Glu Ile Val Lys Gln Gly Cys Trp Leu65
70 75 80Asp Asp Ile Asn
Cys Tyr Asp Arg Thr Asp Cys Val Glu Lys Lys Asp 85
90 95Ser Pro Glu Val Tyr Phe Cys Cys Cys Glu
Gly Asn Met Cys Asn Glu 100 105
110Lys Phe Ser Tyr Phe Pro Glu Met Glu Val Thr Gln Pro Thr Ser Asn
115 120 125Pro Val Thr Pro Lys Pro Pro
Tyr Tyr Asn Ile Leu Leu Tyr Ser Leu 130 135
140Val Pro Leu Met Leu Ile Ala Gly Ile Val Ile Cys Ala Phe Trp
Val145 150 155 160Tyr Arg
His His Lys Met Ala Tyr Pro Pro Val Leu Val Pro Thr Gln
165 170 175Asp Pro Gly Pro Pro Pro Pro
Ser Pro Leu Leu Gly Leu Lys Pro Leu 180 185
190Gln Leu Leu Glu Val Lys Ala Arg Gly Arg Phe Gly Cys Val
Trp Lys 195 200 205Ala Gln Leu Leu
Asn Glu Tyr Val Ala Val Lys Ile Phe Pro Ile Gln 210
215 220Asp Lys Gln Ser Trp Gln Asn Glu Tyr Glu Val Tyr
Ser Leu Pro Gly225 230 235
240Met Lys His Glu Asn Ile Leu Gln Phe Ile Gly Ala Glu Lys Arg Gly
245 250 255Thr Ser Val Asp Val
Asp Leu Trp Leu Ile Thr Ala Phe His Glu Lys 260
265 270Gly Ser Leu Ser Asp Phe Leu Lys Ala Asn Val Val
Ser Trp Asn Glu 275 280 285Leu Cys
His Ile Ala Glu Thr Met Ala Arg Gly Leu Ala Tyr Leu His 290
295 300Glu Asp Ile Pro Gly Leu Lys Asp Gly His Lys
Pro Ala Ile Ser His305 310 315
320Arg Asp Ile Lys Ser Lys Asn Val Leu Leu Lys Asn Asn Leu Thr Ala
325 330 335Cys Ile Ala Asp
Phe Gly Leu Ala Leu Lys Phe Glu Ala Gly Lys Ser 340
345 350Ala Gly Asp Thr His Gly Gln Val Gly Thr Arg
Arg Tyr Met Ala Pro 355 360 365Glu
Val Leu Glu Gly Ala Ile Asn Phe Gln Arg Asp Ala Phe Leu Arg 370
375 380Ile Asp Met Tyr Ala Met Gly Leu Val Leu
Trp Glu Leu Ala Ser Arg385 390 395
400Cys Thr Ala Ala Asp Gly Pro Val Asp Glu Tyr Met Leu Pro Phe
Glu 405 410 415Glu Glu Ile
Gly Gln His Pro Ser Leu Glu Asp Met Gln Glu Val Val 420
425 430Val His Lys Lys Lys Arg Pro Val Leu Arg
Asp Tyr Trp Gln Lys His 435 440
445Ala Gly Met Ala Met Leu Cys Glu Thr Ile Glu Glu Cys Trp Asp His 450
455 460Asp Ala Glu Ala Arg Leu Ser Ala
Gly Cys Val Gly Glu Arg Ile Thr465 470
475 480Gln Met Gln Arg Leu Thr Asn Ile Ile Thr Thr Glu
Asp Ile Val Thr 485 490
495Val Val Thr Met Val Thr Asn Val Asp Phe Pro Pro Lys Glu Ser Ser
500 505 510Leu108148PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 108Met Gly Ala Ala Ala Lys Leu Ala Phe
Ala Val Phe Leu Ile Ser Cys1 5 10
15Ser Ser Gly Ala Ile Leu Gly Arg Ser Glu Thr Gln Glu Cys Leu
Phe 20 25 30Phe Asn Ala Asn
Trp Glu Lys Asp Arg Thr Asn Gln Thr Gly Val Glu 35
40 45Pro Cys Tyr Gly Asp Lys Asp Lys Arg Arg His Cys
Phe Ala Thr Trp 50 55 60Lys Asn Ile
Ser Gly Ser Ile Glu Ile Val Lys Gln Gly Cys Trp Leu65 70
75 80Asp Asp Ile Asn Cys Tyr Asp Arg
Thr Asp Cys Val Glu Lys Lys Thr 85 90
95Ala Leu Lys Tyr Ile Phe Val Ala Val Arg Ala Ile Cys Val
Met Lys 100 105 110Ser Phe Leu
Ile Phe Arg Arg Trp Lys Ser His Ser Pro Leu Gln Ile 115
120 125Gln Leu His Leu Ser His Pro Ile Thr Thr Ser
Cys Ser Ile Pro Trp 130 135 140Cys His
Leu Cys145109440PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 109Met Gly
Ala Ala Ala Lys Leu Ala Phe Ala Val Phe Leu Ile Ser Cys1 5
10 15Ser Ser Gly Ala Ile Leu Gly Arg
Ser Glu Thr Gln Glu Cys Leu Phe 20 25
30Phe Asn Ala Asn Trp Glu Lys Asp Arg Thr Asn Gln Thr Gly Val
Glu 35 40 45Pro Cys Tyr Gly Asp
Lys Asp Lys Arg Arg His Cys Phe Ala Thr Trp 50 55
60Lys Asn Ile Ser Gly Ser Ile Glu Ile Val Lys Gln Gly Cys
Trp Leu65 70 75 80Asp
Asp Ile Asn Cys Tyr Asp Arg Thr Asp Cys Val Glu Lys Lys Asp
85 90 95Ser Pro Glu Val Tyr Phe Cys
Cys Cys Glu Gly Asn Met Cys Asn Glu 100 105
110Lys Phe Ser Tyr Phe Pro Glu Met Glu Val Thr Gln Pro Thr
Ser Asn 115 120 125Pro Val Thr Pro
Lys Pro Pro Tyr Tyr Asn Ile Leu Leu Tyr Ser Leu 130
135 140Val Pro Leu Met Leu Ile Ala Gly Ile Val Ile Cys
Ala Phe Trp Val145 150 155
160Tyr Arg His His Lys Met Ala Tyr Pro Pro Val Leu Val Pro Thr Gln
165 170 175Asp Pro Gly Pro Pro
Pro Pro Ser Pro Leu Leu Gly Leu Lys Pro Leu 180
185 190Gln Leu Leu Glu Val Lys Ala Arg Gly Arg Phe Gly
Cys Val Trp Lys 195 200 205Ala Gln
Leu Leu Asn Glu Tyr Val Ala Val Lys Ile Phe Pro Ile Gln 210
215 220Asp Lys Gln Ser Trp Gln Asn Glu Tyr Glu Val
Tyr Ser Leu Pro Gly225 230 235
240Met Lys His Glu Asn Ile Leu Gln Phe Ile Gly Ala Glu Lys Arg Gly
245 250 255Thr Ser Val Asp
Val Asp Leu Trp Leu Ile Thr Ala Phe His Glu Lys 260
265 270Gly Ser Leu Ser Asp Phe Leu Lys Ala Asn Val
Val Ser Trp Asn Glu 275 280 285Leu
Cys His Ile Ala Glu Thr Met Ala Arg Gly Leu Ala Tyr Leu His 290
295 300Glu Asp Ile Pro Gly Leu Lys Asp Gly His
Lys Pro Ala Ile Ser His305 310 315
320Arg Asp Ile Lys Ser Lys Asn Val Leu Leu Lys Asn Asn Leu Thr
Ala 325 330 335Cys Ile Ala
Asp Phe Gly Leu Ala Leu Lys Phe Glu Ala Gly Lys Ser 340
345 350Ala Gly Asp Thr His Gly Gln Val Gly Thr
Arg Arg Tyr Met Ala Pro 355 360
365Glu Val Leu Glu Gly Ala Ile Asn Phe Gln Arg Asp Ala Phe Leu Arg 370
375 380Ile Asp Met Tyr Ala Met Gly Leu
Val Leu Trp Glu Leu Ala Ser Arg385 390
395 400Cys Thr Ala Ala Asp Gly Pro Val Asp Glu Tyr Met
Leu Pro Phe Glu 405 410
415Glu Glu Ile Gly Gln His Pro Ser Leu Glu Asp Met Gln Glu Val Val
420 425 430Val His Lys Lys Arg Gly
Leu Phe 435 440110630PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 110Met Val Leu Arg Lys Leu Ser Lys Lys
Asp Val Thr Thr Lys Leu Lys1 5 10
15Ala Met Gln Glu Phe Gly Thr Met Cys Thr Glu Arg Asp Thr Glu
Thr 20 25 30Val Lys Gly Val
Leu Pro Tyr Trp Pro Arg Ile Phe Cys Lys Ile Ser 35
40 45Leu Asp His Asp Arg Arg Val Arg Glu Ala Thr Gln
Gln Ala Phe Glu 50 55 60Lys Leu Thr
Leu Lys Val Lys Lys Gln Leu Ala Pro Tyr Leu Lys Ser65 70
75 80Leu Met Gly Tyr Trp Leu Met Ala
Gln Cys Asp Thr Tyr Thr Pro Ala 85 90
95Ala Phe Ala Ala Lys Asp Ala Phe Glu Ala Ala Phe Pro Pro
Ser Lys 100 105 110Gln Pro Glu
Ala Ile Ala Phe Cys Lys Asp Glu Ile Thr Ser Val Leu 115
120 125Gln Asp His Leu Ile Lys Glu Thr Pro Asp Thr
Leu Ser Asp Pro Gln 130 135 140Thr Val
Pro Glu Glu Glu Arg Glu Ala Lys Phe Tyr Arg Val Val Thr145
150 155 160Cys Ser Leu Leu Ala Leu Lys
Arg Leu Leu Cys Leu Leu Pro Asp Asn 165
170 175Glu Leu Asp Ser Leu Glu Glu Lys Phe Lys Ser Leu
Leu Ser Gln Asn 180 185 190Lys
Phe Trp Lys Tyr Gly Lys His Ser Val Pro Gln Ile Arg Ser Ala 195
200 205Tyr Phe Glu Leu Val Ser Ala Leu Cys
Gln Arg Ile Pro Gln Leu Met 210 215
220Lys Glu Glu Ala Ser Lys Val Ser Pro Ser Val Leu Leu Ser Ile Asp225
230 235 240Asp Ser Asp Pro
Ile Val Cys Pro Ala Leu Trp Glu Ala Val Leu Tyr 245
250 255Thr Leu Thr Thr Ile Glu Asp Cys Trp Leu
His Val Asn Ala Lys Lys 260 265
270Ser Val Phe Pro Lys Leu Ser Thr Val Ile Arg Glu Gly Gly Arg Gly
275 280 285Leu Ala Thr Val Ile Tyr Pro
Tyr Leu Leu Pro Phe Ile Ser Lys Leu 290 295
300Pro His Ser Ile Thr Asn Pro Lys Leu Asp Phe Phe Lys Asn Phe
Leu305 310 315 320Thr Ser
Leu Val Ala Gly Leu Ser Thr Glu Arg Thr Lys Thr Ser Ser
325 330 335Ser Glu Ser Ser Ala Val Ile
Ser Ala Phe Tyr Glu Cys Leu Arg Phe 340 345
350Ile Met Gln Gln Asn Leu Gly Glu Glu Glu Ile Glu Gln Met
Leu Val 355 360 365Asn Asp Gln Leu
Ile Pro Phe Ile Asp Ala Val Leu Lys Asp Pro Gly 370
375 380Leu Gln His Gly Gln Leu Phe Asn His Leu Ala Glu
Thr Leu Ser Ser385 390 395
400Trp Glu Ala Lys Ala Asp Thr Glu Lys Asp Glu Lys Thr Ala His Asn
405 410 415Leu Glu Asn Val Leu
Ile His Phe Trp Glu Arg Leu Ser Glu Ile Cys 420
425 430Val Ala Lys Ile Ser Glu Pro Glu Ala Asp Val Glu
Ser Val Leu Gly 435 440 445Val Ser
Asn Leu Leu Gln Val Leu Gln Lys Pro Lys Ser Ser Leu Lys 450
455 460Ser Ser Lys Lys Lys Asn Gly Lys Val Arg Phe
Ala Asp Glu Ile Leu465 470 475
480Glu Ser Asn Lys Glu Asn Glu Lys Cys Val Ser Ser Glu Gly Glu Lys
485 490 495Ile Glu Gly Trp
Glu Leu Thr Thr Glu Pro Ser Leu Thr His Asn Ser 500
505 510Ser Gly Leu Leu Ser Pro Leu Arg Lys Lys Pro
Leu Glu Asp Leu Val 515 520 525Cys
Lys Leu Ala Asp Ile Ser Ile Asn Tyr Val Asn Glu Arg Lys Ser 530
535 540Glu Gln His Leu Arg Phe Leu Ser Thr Leu
Leu Asp Ser Phe Ser Ser545 550 555
560Ser Arg Val Phe Lys Met Leu Leu Gly Asp Glu Lys Gln Ser Ile
Val 565 570 575Gln Ala Lys
Pro Leu Glu Ile Ala Lys Leu Val Gln Lys Asn Pro Ala 580
585 590Val Gln Phe Leu Tyr Gln Lys Leu Ile Gly
Trp Leu Asn Glu Asp Gln 595 600
605Arg Lys Asp Phe Gly Phe Leu Val Asp Ile Leu Tyr Ser Ala Leu Arg 610
615 620Cys Cys Asp Asn Asp Met625
630111501PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 111Met Val
Leu Arg Lys Leu Ser Lys Lys Asp Val Thr Thr Lys Leu Lys1 5
10 15Ala Met Gln Glu Phe Gly Thr Met
Cys Thr Glu Arg Asp Thr Glu Thr 20 25
30Val Lys Gly Val Leu Pro Tyr Trp Pro Arg Ile Phe Cys Lys Ile
Ser 35 40 45Leu Asp His Asp Arg
Arg Val Arg Glu Ala Thr Gln Gln Ala Phe Glu 50 55
60Lys Leu Thr Leu Lys Val Lys Lys Gln Leu Ala Pro Tyr Leu
Lys Ser65 70 75 80Leu
Met Gly Tyr Trp Leu Met Ala Gln Cys Asp Thr Tyr Thr Pro Ala
85 90 95Ala Phe Ala Ala Lys Asp Ala
Phe Glu Ala Ala Phe Pro Pro Ser Lys 100 105
110Gln Pro Glu Ala Ile Ala Phe Cys Lys Asp Glu Ile Thr Ser
Val Leu 115 120 125Gln Asp His Leu
Ile Lys Glu Thr Pro Asp Thr Leu Ser Asp Pro Gln 130
135 140Thr Val Pro Glu Glu Glu Arg Glu Ala Lys Phe Tyr
Arg Val Val Thr145 150 155
160Cys Ser Leu Leu Ala Leu Lys Arg Leu Leu Cys Leu Leu Pro Asp Asn
165 170 175Glu Leu Asp Ser Leu
Glu Glu Lys Phe Lys Ser Leu Leu Ser Gln Asn 180
185 190Lys Phe Trp Lys Tyr Gly Lys His Ser Val Pro Gln
Ile Arg Ser Ala 195 200 205Tyr Phe
Glu Leu Val Ser Ala Leu Cys Gln Arg Ile Pro Gln Leu Met 210
215 220Lys Glu Glu Ala Ser Lys Val Ser Pro Ser Val
Leu Leu Ser Ile Asp225 230 235
240Asp Ser Asp Pro Ile Val Cys Pro Ala Leu Trp Glu Ala Val Leu Tyr
245 250 255Thr Leu Thr Thr
Ile Glu Asp Cys Trp Leu His Val Asn Ala Lys Lys 260
265 270Ser Val Phe Pro Lys Leu Ser Thr Val Ile Arg
Glu Gly Gly Arg Gly 275 280 285Leu
Ala Thr Val Ile Tyr Pro Tyr Leu Leu Pro Phe Ile Ser Lys Leu 290
295 300Pro His Ser Ile Thr Asn Pro Lys Leu Asp
Phe Phe Lys Asn Phe Leu305 310 315
320Thr Ser Leu Val Ala Gly Leu Ser Thr Glu Arg Thr Lys Thr Ser
Ser 325 330 335Ser Glu Ser
Ser Ala Val Ile Ser Ala Phe Tyr Glu Cys Leu Arg Phe 340
345 350Ile Met Gln Gln Asn Leu Gly Glu Glu Glu
Ile Glu Gln Met Leu Val 355 360
365Asn Asp Gln Leu Ile Pro Phe Ile Asp Ala Val Leu Lys Asp Pro Gly 370
375 380Leu Gln His Gly Gln Leu Phe Asn
His Leu Ala Glu Thr Leu Ser Ser385 390
395 400Trp Glu Ala Lys Ala Asp Thr Glu Lys Asp Glu Lys
Thr Ala His Asn 405 410
415Leu Glu Asn Val Leu Ile His Phe Trp Glu Arg Leu Ser Glu Ile Cys
420 425 430Val Ala Lys Ile Ser Glu
Pro Glu Ala Asp Val Glu Ser Val Leu Gly 435 440
445Val Ser Asn Leu Leu Gln Val Leu Gln Lys Pro Lys Ser Ser
Leu Lys 450 455 460Ser Ser Lys Lys Lys
Met Val Arg Leu Asp Leu Leu Met Arg Tyr Leu465 470
475 480Lys Ala Ile Lys Arg Met Lys Asn Val Tyr
Leu Gln Lys Glu Arg Arg 485 490
495Leu Lys Ala Gly Asn 500112470PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 112Met Val Leu Arg Lys Leu Ser Lys Lys
Asp Val Thr Thr Lys Leu Lys1 5 10
15Ala Met Gln Glu Phe Gly Thr Met Cys Thr Glu Arg Asp Thr Glu
Thr 20 25 30Val Lys Gly Val
Leu Pro Tyr Trp Pro Arg Ile Phe Cys Lys Ile Ser 35
40 45Leu Asp His Asp Arg Arg Val Arg Glu Ala Thr Gln
Gln Ala Phe Glu 50 55 60Lys Leu Thr
Leu Lys Val Lys Lys Gln Leu Ala Pro Tyr Leu Lys Ser65 70
75 80Leu Met Gly Tyr Trp Leu Met Ala
Gln Cys Asp Thr Tyr Thr Pro Ala 85 90
95Ala Phe Ala Ala Lys Asp Ala Phe Glu Ala Ala Phe Pro Pro
Ser Lys 100 105 110Gln Pro Glu
Ala Ile Ala Phe Cys Lys Asp Glu Ile Thr Ser Val Leu 115
120 125Gln Asp His Leu Ile Lys Glu Thr Pro Asp Thr
Leu Ser Asp Pro Gln 130 135 140Thr Val
Pro Glu Glu Glu Arg Glu Ala Lys Phe Tyr Arg Val Val Thr145
150 155 160Cys Ser Leu Leu Ala Leu Lys
Arg Leu Leu Cys Leu Leu Pro Asp Asn 165
170 175Glu Leu Asp Ser Leu Glu Glu Lys Phe Lys Ser Leu
Leu Ser Gln Asn 180 185 190Lys
Phe Trp Lys Tyr Gly Lys His Ser Val Pro Gln Ile Arg Ser Ala 195
200 205Tyr Phe Glu Leu Val Ser Ala Leu Cys
Gln Arg Ile Pro Gln Leu Met 210 215
220Lys Glu Glu Ala Ser Lys Val Ser Pro Ser Val Leu Leu Ser Ile Asp225
230 235 240Asp Ser Asp Pro
Ile Val Cys Pro Ala Leu Trp Glu Ala Val Leu Tyr 245
250 255Thr Leu Thr Thr Ile Glu Asp Cys Trp Leu
His Val Asn Ala Lys Lys 260 265
270Ser Val Phe Pro Lys Leu Ser Thr Val Ile Arg Glu Gly Gly Arg Gly
275 280 285Leu Ala Thr Val Ile Tyr Pro
Tyr Leu Leu Pro Phe Ile Ser Lys Leu 290 295
300Pro His Ser Ile Thr Asn Pro Lys Leu Asp Phe Phe Lys Asn Phe
Leu305 310 315 320Thr Ser
Leu Val Ala Gly Leu Ser Thr Glu Arg Thr Lys Thr Ser Ser
325 330 335Ser Glu Ser Ser Ala Val Ile
Ser Ala Phe Tyr Glu Cys Leu Arg Phe 340 345
350Ile Met Gln Gln Asn Leu Gly Glu Glu Glu Ile Glu Gln Met
Leu Val 355 360 365Asn Asp Gln Leu
Ile Pro Phe Ile Asp Ala Val Leu Lys Asp Pro Gly 370
375 380Leu Gln His Gly Gln Leu Phe Asn His Leu Ala Glu
Thr Leu Ser Ser385 390 395
400Trp Glu Ala Lys Ala Asp Thr Glu Lys Asp Glu Lys Thr Ala His Asn
405 410 415Leu Glu Asn Val Leu
Ile His Phe Trp Glu Arg Leu Ser Glu Ile Cys 420
425 430Val Ala Lys Ile Ser Glu Pro Glu Ala Asp Val Glu
Ser Val Leu Gly 435 440 445Val Ser
Asn Leu Leu Gln Val Leu Gln Lys Pro Lys Ser Ser Leu Lys 450
455 460Ser Ser Lys Lys Lys Trp465
470113471PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 113Met Val Leu
Arg Lys Leu Ser Lys Lys Asp Val Thr Thr Lys Leu Lys1 5
10 15Ala Met Gln Glu Phe Gly Thr Met Cys
Thr Glu Arg Asp Thr Glu Thr 20 25
30Val Lys Gly Val Leu Pro Tyr Trp Pro Arg Ile Phe Cys Lys Ile Ser
35 40 45Leu Asp His Asp Arg Arg Val
Arg Glu Ala Thr Gln Gln Ala Phe Glu 50 55
60Lys Leu Thr Leu Lys Val Lys Lys Gln Leu Ala Pro Tyr Leu Lys Ser65
70 75 80Leu Met Gly Tyr
Trp Leu Met Ala Gln Cys Asp Thr Tyr Thr Pro Ala 85
90 95Ala Phe Ala Ala Lys Asp Ala Phe Glu Ala
Ala Phe Pro Pro Ser Lys 100 105
110Gln Pro Glu Ala Ile Ala Phe Cys Lys Asp Glu Ile Thr Ser Val Leu
115 120 125Gln Asp His Leu Ile Lys Glu
Thr Pro Asp Thr Leu Ser Asp Pro Gln 130 135
140Thr Val Pro Glu Glu Glu Arg Glu Ala Lys Phe Tyr Arg Val Val
Thr145 150 155 160Cys Ser
Leu Leu Ala Leu Lys Arg Leu Leu Cys Leu Leu Pro Asp Asn
165 170 175Glu Leu Asp Ser Leu Glu Glu
Lys Phe Lys Ser Leu Leu Ser Gln Asn 180 185
190Lys Phe Trp Lys Tyr Gly Lys His Ser Val Pro Gln Ile Arg
Ser Ala 195 200 205Tyr Phe Glu Leu
Val Ser Ala Leu Cys Gln Arg Ile Pro Gln Leu Met 210
215 220Lys Glu Glu Ala Ser Lys Val Ser Pro Ser Val Leu
Leu Ser Ile Asp225 230 235
240Asp Ser Asp Pro Ile Val Cys Pro Ala Leu Trp Glu Ala Val Leu Tyr
245 250 255Thr Leu Thr Thr Ile
Glu Asp Cys Trp Leu His Val Asn Ala Lys Lys 260
265 270Ser Val Phe Pro Lys Leu Ser Thr Val Ile Arg Glu
Gly Gly Arg Gly 275 280 285Leu Ala
Thr Val Ile Tyr Pro Tyr Leu Leu Pro Phe Ile Ser Lys Leu 290
295 300Pro His Ser Ile Thr Asn Pro Lys Leu Asp Phe
Phe Lys Asn Phe Leu305 310 315
320Thr Ser Leu Val Ala Gly Leu Ser Thr Glu Arg Thr Lys Thr Ser Ser
325 330 335Ser Glu Ser Ser
Ala Val Ile Ser Ala Phe Tyr Glu Cys Leu Arg Phe 340
345 350Ile Met Gln Gln Asn Leu Gly Glu Glu Glu Ile
Glu Gln Met Leu Val 355 360 365Asn
Asp Gln Leu Ile Pro Phe Ile Asp Ala Val Leu Lys Asp Pro Gly 370
375 380Leu Gln His Gly Gln Leu Phe Asn His Leu
Ala Glu Thr Leu Ser Ser385 390 395
400Trp Glu Ala Lys Ala Asp Thr Glu Lys Asp Glu Lys Thr Ala His
Asn 405 410 415Leu Glu Asn
Val Leu Ile His Phe Trp Glu Arg Leu Ser Glu Ile Cys 420
425 430Val Ala Lys Ile Ser Glu Pro Glu Ala Asp
Val Glu Ser Val Leu Gly 435 440
445Val Ser Asn Leu Leu Gln Val Leu Gln Lys Pro Lys Ser Ser Leu Lys 450
455 460Ser Ser Lys Lys Lys Lys Trp465
4701141455PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
114Met Ala Gly Arg Pro Leu Arg Ile Gly Asp Gln Leu Val Leu Glu Glu1
5 10 15Asp Tyr Asp Glu Thr Tyr
Ile Pro Ser Glu Gln Glu Ile Leu Glu Phe 20 25
30Ala Arg Glu Ile Gly Ile Asp Pro Ile Lys Glu Pro Glu
Leu Met Trp 35 40 45Leu Ala Arg
Glu Gly Ile Val Ala Pro Leu Pro Gly Glu Trp Lys Pro 50
55 60Cys Gln Asp Ile Thr Gly Asp Ile Tyr Tyr Phe Asn
Phe Ala Asn Gly65 70 75
80Gln Ser Met Trp Asp His Pro Cys Asp Glu His Tyr Arg Ser Leu Val
85 90 95Ile Gln Glu Arg Ala Lys
Leu Ser Thr Ser Gly Ala Ile Lys Lys Lys 100
105 110Lys Lys Lys Lys Glu Lys Lys Asp Lys Lys Asp Arg
Asp Pro Pro Lys 115 120 125Ser Ser
Leu Ala Leu Gly Ser Ser Leu Ala Pro Val His Val Pro Leu 130
135 140Gly Gly Leu Ala Pro Leu Arg Gly Leu Val Asp
Thr Pro Pro Ser Ala145 150 155
160Leu Arg Gly Ser Gln Ser Val Ser Leu Gly Ser Ser Val Glu Ser Gly
165 170 175Arg Gln Leu Gly
Glu Leu Met Leu Pro Ser Gln Gly Leu Lys Thr Ser 180
185 190Ala Tyr Thr Lys Gly Leu Leu Gly Ser Ile Tyr
Glu Asp Lys Thr Ala 195 200 205Leu
Ser Leu Leu Gly Leu Gly Glu Glu Thr Asn Glu Glu Asp Glu Glu 210
215 220Glu Ser Asp Asn Gln Ser Val His Ser Ser
Ser Glu Pro Leu Arg Asn225 230 235
240Leu His Leu Asp Ile Gly Ala Leu Gly Gly Asp Phe Glu Tyr Glu
Glu 245 250 255Ser Leu Arg
Thr Ser Gln Pro Glu Glu Lys Lys Asp Val Ser Leu Asp 260
265 270Ser Asp Ala Ala Gly Pro Pro Thr Pro Cys
Lys Pro Ser Ser Pro Gly 275 280
285Ala Asp Ser Ser Leu Ser Ser Ala Val Gly Lys Gly Arg Gln Gly Ser 290
295 300Gly Ala Arg Pro Gly Leu Pro Glu
Lys Glu Glu Asn Glu Lys Ser Glu305 310
315 320Pro Lys Ile Cys Arg Asn Leu Val Thr Pro Lys Ala
Asp Pro Thr Gly 325 330
335Ser Glu Pro Ala Lys Ala Ser Glu Lys Glu Ala Pro Glu Asp Thr Val
340 345 350Asp Ala Gly Glu Glu Gly
Ser Arg Arg Glu Glu Ala Ala Lys Glu Pro 355 360
365Lys Lys Lys Ala Ser Ala Leu Glu Glu Gly Ser Ser Asp Ala
Ser Gln 370 375 380Glu Leu Glu Ile Ser
Glu His Met Lys Glu Pro Gln Leu Ser Asp Ser385 390
395 400Ile Ala Ser Asp Pro Lys Ser Phe His Gly
Leu Asp Phe Gly Phe Arg 405 410
415Ser Arg Ile Ser Glu His Leu Leu Asp Val Asp Val Leu Ser Pro Val
420 425 430Leu Gly Gly Ala Cys
Arg Gln Ala Gln Gln Pro Leu Gly Ile Glu Asp 435
440 445Lys Asp Asp Ser Gln Ser Ser Gln Asp Glu Leu Gln
Ser Lys Gln Ser 450 455 460Lys Gly Leu
Glu Glu Arg Tyr His Arg Leu Ser Pro Pro Leu Pro His465
470 475 480Glu Glu Arg Ala Gln Ser Pro
Pro Arg Ser Leu Ala Thr Glu Glu Glu 485
490 495Pro Pro Gln Gly Pro Glu Gly Gln Pro Glu Trp Lys
Glu Ala Glu Glu 500 505 510Leu
Gly Glu Asp Ser Ala Ala Ser Leu Ser Leu Gln Leu Ser Leu Gln 515
520 525Arg Glu Gln Ala Pro Ser Pro Pro Ala
Ala Cys Glu Lys Gly Lys Glu 530 535
540Gln His Ser Gln Ala Glu Glu Leu Gly Pro Gly Gln Glu Glu Ala Glu545
550 555 560Asp Pro Glu Glu
Lys Val Ala Val Ser Pro Thr Pro Pro Val Ser Pro 565
570 575Glu Val Arg Ser Thr Glu Pro Val Ala Pro
Pro Glu Gln Leu Ser Glu 580 585
590Ala Ala Leu Lys Ala Met Glu Glu Ala Val Ala Gln Val Leu Glu Gln
595 600 605Asp Gln Arg His Leu Leu Glu
Ser Lys Gln Glu Lys Met Gln Gln Leu 610 615
620Arg Glu Lys Leu Cys Gln Glu Glu Glu Glu Glu Ile Leu Arg Leu
His625 630 635 640Gln Gln
Lys Glu Gln Ser Leu Ser Ser Leu Arg Glu Arg Leu Gln Lys
645 650 655Ala Ile Glu Glu Glu Glu Ala
Arg Met Arg Glu Glu Glu Ser Gln Arg 660 665
670Leu Ser Trp Leu Arg Ala Gln Val Gln Ser Ser Thr Gln Ala
Asp Glu 675 680 685Asp Gln Ile Arg
Ala Glu Gln Glu Ala Ser Leu Gln Lys Leu Arg Glu 690
695 700Glu Leu Glu Ser Gln Gln Lys Ala Glu Arg Ala Ser
Leu Glu Gln Lys705 710 715
720Asn Arg Gln Met Leu Glu Gln Leu Lys Glu Glu Ile Glu Ala Ser Glu
725 730 735Lys Ser Glu Gln Ala
Ala Leu Asn Ala Ala Lys Glu Lys Ala Leu Gln 740
745 750Gln Leu Arg Glu Gln Leu Glu Gly Glu Arg Lys Glu
Ala Val Ala Thr 755 760 765Leu Glu
Lys Glu His Ser Ala Glu Leu Glu Arg Leu Cys Ser Ser Leu 770
775 780Glu Ala Lys His Arg Glu Val Val Ser Ser Leu
Gln Lys Lys Ile Gln785 790 795
800Glu Ala Gln Gln Lys Glu Glu Ala Gln Leu Gln Lys Cys Leu Gly Gln
805 810 815Val Glu His Arg
Val His Gln Lys Ser Tyr His Val Ala Gly Tyr Glu 820
825 830His Glu Leu Ser Ser Leu Leu Arg Glu Lys Arg
Gln Glu Val Glu Gly 835 840 845Glu
His Glu Arg Arg Leu Asp Lys Met Lys Glu Glu His Gln Gln Val 850
855 860Met Ala Lys Ala Arg Glu Gln Tyr Glu Ala
Glu Glu Arg Lys Gln Arg865 870 875
880Ala Glu Leu Leu Gly His Leu Thr Gly Glu Leu Glu Arg Leu Gln
Arg 885 890 895Ala His Glu
Arg Glu Leu Glu Thr Val Arg Gln Glu Gln His Lys Arg 900
905 910Leu Glu Asp Leu Arg Arg Arg His Arg Glu
Gln Glu Arg Lys Leu Gln 915 920
925Asp Leu Glu Leu Asp Leu Glu Thr Arg Ala Lys Asp Val Lys Ala Arg 930
935 940Leu Ala Leu Leu Glu Val Gln Glu
Glu Thr Ala Arg Arg Glu Lys Gln945 950
955 960Gln Leu Leu Asp Val Gln Arg Gln Val Ala Leu Lys
Ser Glu Glu Ala 965 970
975Thr Ala Thr His Gln Gln Leu Glu Glu Ala Gln Lys Glu His Thr His
980 985 990Leu Leu Gln Ser Asn Gln
Gln Leu Arg Glu Ile Leu Asp Glu Leu Gln 995 1000
1005Ala Arg Lys Leu Lys Leu Glu Ser Gln Val Asp Leu
Leu Gln Ala 1010 1015 1020Gln Ser Gln
Gln Leu Gln Lys His Phe Ser Ser Leu Glu Ala Glu 1025
1030 1035Ala Gln Lys Lys Gln His Leu Leu Arg Glu Val
Thr Val Glu Glu 1040 1045 1050Asn Asn
Ala Ser Pro His Phe Glu Pro Asp Leu His Ile Glu Asp 1055
1060 1065Leu Arg Lys Ser Leu Gly Thr Asn Gln Thr
Lys Glu Val Ser Ser 1070 1075 1080Ser
Leu Ser Gln Ser Lys Glu Asp Leu Tyr Leu Asp Ser Leu Ser 1085
1090 1095Ser His Asn Val Trp His Leu Leu Ser
Ala Glu Gly Val Ala Leu 1100 1105
1110Arg Ser Ala Lys Glu Phe Leu Val Gln Gln Thr Arg Ser Met Arg
1115 1120 1125Arg Arg Gln Thr Ala Leu
Lys Ala Ala Gln Gln His Trp Arg His 1130 1135
1140Glu Leu Ala Ser Ala Gln Glu Val Ala Lys Asp Pro Pro Gly
Ile 1145 1150 1155Lys Ala Leu Glu Asp
Met Arg Lys Asn Leu Glu Lys Glu Thr Arg 1160 1165
1170His Leu Asp Glu Met Lys Ser Ala Met Arg Lys Gly His
Asn Leu 1175 1180 1185Leu Lys Lys Lys
Glu Glu Lys Leu Asn Gln Leu Glu Ser Ser Leu 1190
1195 1200Trp Glu Glu Ala Ser Asp Glu Gly Thr Leu Gly
Gly Ser Pro Thr 1205 1210 1215Lys Lys
Ala Val Thr Phe Asp Leu Ser Asp Met Asp Ser Leu Ser 1220
1225 1230Ser Glu Ser Ser Glu Ser Phe Ser Pro Pro
His Leu Asp Ser Thr 1235 1240 1245Pro
Ser Leu Thr Ser Arg Lys Ile His Gly Leu Ser His Ser Leu 1250
1255 1260Arg Gln Ile Ser Ser Gln Leu Ser Ser
Val Leu Ser Ile Leu Asp 1265 1270
1275Ser Leu Asn Pro Gln Ser Pro Pro Pro Leu Leu Ala Ser Met Pro
1280 1285 1290Ala Gln Leu Pro Pro Arg
Asp Pro Lys Ser Thr Pro Thr Pro Thr 1295 1300
1305Tyr Tyr Gly Ser Leu Ala Arg Phe Ser Ala Leu Ser Ser Ala
Thr 1310 1315 1320Pro Thr Ser Thr Gln
Trp Ala Trp Asp Ser Gly Gln Gly Pro Arg 1325 1330
1335Leu Pro Ser Ser Val Ala Gln Thr Val Asp Asp Phe Leu
Leu Glu 1340 1345 1350Lys Trp Arg Lys
Tyr Phe Pro Ser Gly Ile Pro Leu Leu Ser Asn 1355
1360 1365Ser Pro Thr Pro Leu Glu Ser Arg Leu Gly Tyr
Met Ser Ala Ser 1370 1375 1380Glu Gln
Leu Arg Leu Leu Gln His Ser His Ser Gln Val Pro Glu 1385
1390 1395Ala Gly Ser Thr Thr Phe Gln Gly Ile Ile
Glu Ala Asn Arg Arg 1400 1405 1410Trp
Leu Glu Arg Val Lys Asn Asp Pro Arg Leu Pro Leu Phe Ser 1415
1420 1425Ser Thr Pro Lys Pro Lys Ala Thr Leu
Ser Leu Leu Gln Leu Gly 1430 1435
1440Leu Asp Glu His Asn Arg Val Lys Val Tyr Arg Phe 1445
1450 1455115136PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 115Met Ala Gly Arg Pro Leu Arg Ile Gly Asp Gln Leu Val
Leu Glu Glu1 5 10 15Asp
Tyr Asp Glu Thr Tyr Ile Pro Ser Glu Gln Glu Ile Leu Glu Phe 20
25 30Ala Arg Glu Ile Gly Ile Asp Pro
Ile Lys Glu Pro Glu Leu Met Trp 35 40
45Leu Ala Arg Glu Gly Ile Val Ala Pro Leu Pro Gly Glu Trp Lys Pro
50 55 60Cys Gln Asp Ile Thr Gly Asp Ile
Tyr Tyr Phe Asn Phe Ala Asn Gly65 70 75
80Gln Ser Met Trp Asp His Pro Cys Asp Glu His Tyr Arg
Ser Leu Val 85 90 95Ile
Gln Glu Arg Ala Lys Leu Ser Thr Ser Gly Ala Ile Lys Lys Lys
100 105 110Lys Lys Lys Arg Lys Arg Lys
Thr Arg Arg Thr Glu Thr Pro Pro Lys 115 120
125Val Arg Trp Pro Trp Val Pro His 130
135116202PRTArtificial SequenceDescription of Artificial Sequence
polypeptides encoded by genes with coding microsatellites 116Met Ala Gly
Arg Pro Leu Arg Ile Gly Asp Gln Leu Val Leu Glu Glu1 5
10 15Asp Tyr Asp Glu Thr Tyr Ile Pro Ser
Glu Gln Glu Ile Leu Glu Phe 20 25
30Ala Arg Glu Ile Gly Ile Asp Pro Ile Lys Glu Pro Glu Leu Met Trp
35 40 45Leu Ala Arg Glu Gly Ile Val
Ala Pro Leu Pro Gly Glu Trp Lys Pro 50 55
60Cys Gln Asp Ile Thr Gly Asp Ile Tyr Tyr Phe Asn Phe Ala Asn Gly65
70 75 80Gln Ser Met Trp
Asp His Pro Cys Asp Glu His Tyr Arg Ser Leu Val 85
90 95Ile Gln Glu Arg Ala Lys Leu Ser Thr Ser
Gly Ala Ile Lys Lys Lys 100 105
110Lys Lys Lys Gly Lys Glu Arg Gln Glu Gly Gln Arg Pro Pro Gln Lys
115 120 125Phe Ala Gly Leu Gly Phe Leu
Ile Ser Pro Ser Ser Cys Ser Ser Trp 130 135
140Gly Pro Gly Ser Phe Thr Arg Ser Cys Gly Tyr Pro Thr Leu Cys
Ser145 150 155 160Ser Trp
Ile Ser Lys Arg Glu Pro Gly Glu Leu Ser Gly Val Trp Thr
165 170 175Ser Ala Trp Arg Thr His Ala
Ala Phe Thr Gly Ser Gln Asp Leu Cys 180 185
190Leu Tyr Lys Gly Ser Leu Gly Leu His Ile 195
200117203PRTArtificial SequenceDescription of Artificial
Sequence polypeptides encoded by genes with coding microsatellites
117Met Ala Gly Arg Pro Leu Arg Ile Gly Asp Gln Leu Val Leu Glu Glu1
5 10 15Asp Tyr Asp Glu Thr Tyr
Ile Pro Ser Glu Gln Glu Ile Leu Glu Phe 20 25
30Ala Arg Glu Ile Gly Ile Asp Pro Ile Lys Glu Pro Glu
Leu Met Trp 35 40 45Leu Ala Arg
Glu Gly Ile Val Ala Pro Leu Pro Gly Glu Trp Lys Pro 50
55 60Cys Gln Asp Ile Thr Gly Asp Ile Tyr Tyr Phe Asn
Phe Ala Asn Gly65 70 75
80Gln Ser Met Trp Asp His Pro Cys Asp Glu His Tyr Arg Ser Leu Val
85 90 95Ile Gln Glu Arg Ala Lys
Leu Ser Thr Ser Gly Ala Ile Lys Lys Lys 100
105 110Lys Lys Lys Lys Gly Lys Glu Arg Gln Glu Gly Gln
Arg Pro Pro Gln 115 120 125Lys Phe
Ala Gly Leu Gly Phe Leu Ile Ser Pro Ser Ser Cys Ser Ser 130
135 140Trp Gly Pro Gly Ser Phe Thr Arg Ser Cys Gly
Tyr Pro Thr Leu Cys145 150 155
160Ser Ser Trp Ile Ser Lys Arg Glu Pro Gly Glu Leu Ser Gly Val Trp
165 170 175Thr Ser Ala Trp
Arg Thr His Ala Ala Phe Thr Gly Ser Gln Asp Leu 180
185 190Cys Leu Tyr Lys Gly Ser Leu Gly Leu His Ile
195 200118281PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 118Met Gln Arg Pro Asn Ala His Arg Ile Ser Gln Pro Ile
Arg Gln Ile1 5 10 15Ile
Tyr Gly Leu Leu Leu Asn Ala Ser Pro His Leu Asp Lys Thr Ser 20
25 30Trp Asn Ala Leu Pro Pro Gln Pro
Leu Ala Phe Ser Glu Val Glu Arg 35 40
45Ile Asn Lys Asn Ile Arg Thr Ser Ile Ile Asp Ala Val Glu Leu Ala
50 55 60Lys Asp His Ser Asp Leu Ser Arg
Leu Thr Glu Leu Ser Leu Arg Arg65 70 75
80Arg Gln Met Leu Leu Leu Glu Thr Leu Lys Val Lys Gln
Thr Ile Leu 85 90 95Glu
Pro Ile Pro Thr Ser Leu Lys Leu Pro Ile Ala Val Ser Cys Tyr
100 105 110Trp Leu Gln His Thr Glu Thr
Lys Ala Lys Leu His His Leu Gln Ser 115 120
125Leu Leu Leu Thr Met Leu Val Gly Pro Leu Ile Ala Ile Ile Asn
Ser 130 135 140Pro Gly Lys Glu Glu Leu
Gln Glu Asp Gly Ala Lys Met Leu Tyr Ala145 150
155 160Glu Phe Gln Arg Val Lys Ala Gln Thr Arg Leu
Gly Thr Arg Leu Asp 165 170
175Leu Asp Thr Ala His Ile Phe Cys Gln Trp Gln Ser Cys Leu Gln Met
180 185 190Gly Met Tyr Leu Asn Gln
Leu Leu Ser Thr Pro Leu Pro Glu Pro Asp 195 200
205Leu Thr Arg Leu Tyr Ser Gly Ser Leu Val His Gly Leu Cys
Gln Gln 210 215 220Leu Leu Ala Ser Thr
Ser Val Glu Ser Leu Leu Ser Ile Cys Pro Glu225 230
235 240Ala Lys Gln Leu Tyr Glu Tyr Leu Phe Asn
Ala Thr Arg Ser Tyr Ala 245 250
255Pro Ala Glu Ile Phe Leu Pro Lys Gly Arg Ser Asn Ser Lys Lys Lys
260 265 270Ala Glu Glu Thr Glu
Tyr Gln Leu Phe 275 280119129PRTArtificial
SequenceDescription of Artificial Sequence polypeptides encoded by
genes with coding microsatellites 119Met Gly Arg Gly Leu Leu Arg Gly Leu
Trp Pro Leu His Ile Val Leu1 5 10
15Trp Thr Arg Ile Ala Ser Thr Ile Pro Pro His Val Gln Lys Ser
Val 20 25 30Asn Asn Asp Met
Ile Val Thr Asp Asn Asn Gly Ala Val Lys Phe Pro 35
40 45Gln Leu Cys Lys Phe Cys Asp Val Arg Phe Ser Thr
Cys Asp Asn Gln 50 55 60Lys Ser Cys
Met Ser Asn Cys Ser Ile Thr Ser Ile Cys Glu Lys Pro65 70
75 80Gln Glu Val Cys Val Ala Val Trp
Arg Lys Asn Asp Glu Asn Ile Thr 85 90
95Leu Glu Thr Val Cys His Asp Pro Lys Leu Pro Tyr His Asp
Phe Ile 100 105 110Leu Glu Asp
Ala Ala Ser Pro Lys Cys Ile Met Lys Glu Lys Lys Ala 115
120 125Trp120101PRTArtificial SequenceDescription of
Artificial Sequence polypeptides encoded by genes with coding
microsatellites 120Ile Pro Ala Phe Pro Ala Gly Thr Val Leu Gln Pro Phe
Pro Glu Ala1 5 10 15Ala
Leu Ala Thr Arg Val Thr Val Pro Ala Val Glu Ala Pro Ala Ala 20
25 30Pro Arg Leu Asp Leu Glu Glu Ser
Glu Glu Phe Lys Glu Arg Cys Thr 35 40
45Gln Cys Ala Ala Val Ser Trp Gly Leu Thr Asp Glu Gly Lys Tyr Tyr
50 55 60Cys Thr Ser Cys His Asn Val Thr
Glu Arg Tyr Gln Glu Val Thr Asn65 70 75
80Thr Asp Leu Ile Pro Asn Thr Gln Ile Lys Ala Leu Asn
Arg Gly Leu 85 90 95Lys
Lys Lys Gln Tyr 100
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