Patent application title: DNA BARCODING-BASED METHOD FOR RAPID IDENTIFICATION OF LYCIUM CHINENSIS
Inventors:
IPC8 Class: AC12Q16895FI
USPC Class:
1 1
Class name:
Publication date: 2021-07-08
Patent application number: 20210207226
Abstract:
Disclosed in the present invention is a trnL-trnF barcode and a DNA
barcoding-based method for rapid identification of Lycium chinensis,
relating to the technical field of identification of Lycium chinensis
varieties. A Lycium chinensis phylogenetic tree is constructed based on
the present DNA barcodes, and used in the study of the intraspecific and
interspecific phylogeny of Lycium chinensis. The present invention
further provides trnL-trnF barcode database of Lycium chinensis samples.
By performing sequence alignment of trnL-trnF sequence of the sample to
be identified and the trnL-trnF barcode database of Lycium chinensis
samples, the Lycium chinensis varieties can be effectively identified and
their interspecific relationship can be determined, providing an
effective basis for the classification and identification of Lycium
chinensis varieties.Claims:
1. A DNA barcoding-based method for rapid identification of Lycium
chinensis, wherein the DNA barcoding is trnL-trnF barcoding.
2. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 1, wherein, a trnL-trnF barcode database of Lycium chinensis samples is constructed comprising 34 groups of trnL-trnF barcode, the nucleotide sequence thereof is shown in SEQ ID NO. 1-34.
3. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 1, comprising the following steps: 1) extracting genomic DNA from Lycium chinensis samples; 2) amplifying trnL-trnF barcode sequence fragments using the genomic DNA as a template and the primers with nucleotide sequence shown in SEQ ID NO. 35 and SEQ ID NO. 36 to obtain a PCR product; 3) sequencing the PCR product; and 4) constructing a phylogenetic tree and identifying Lycium chinensis.
4. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 3, wherein the genomic DNA is extracted using a kit in the step 1).
5. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 3, wherein in the step 2), the PCR amplification reaction system is: i) pre-denaturizing at 94.degree. C. for 2 min; ii) denaturizing at 94.degree. C. for 30 s, annealing at 55.degree. C. for 30 s, extending at 72.degree. C. for 2 min, 35 cycles; iii) preservation at 72.degree. C. for 2 min; and iv) storing at 4.degree. C.; performing detection of PCR product by 1.0% agarose gel electrophoresis, and observing the amplification results under a UV gel imaging system.
6. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 3, wherein, a trnL-trnF barcode database of Lycium chinensis samples is constructed comprising 34 groups of trnL-trnF barcode, the nucleotide sequence thereof is shown in SEQ ID NO. 1-34.
7. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 2, wherein, a trnL-trnF barcode database of Lycium chinensis samples is constructed by the followings: analyzing the base composition of a DNA barcoding gene sequence; constructing the barcode database based on the parameters including the frequency of base variation between sequences and the frequency of transition and transversion between sequences and their ratios.
8. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 2, wherein, obtaining the trnL-trnF sequence of the sample to be identified through genomic DNA extraction, PCR amplification and sequencing of PCR products; comparing sequence alignment of trnL-trnF sequence of the sample to be identified and the trnL-trnF barcode database of Lycium chinensis samples.
9. The DNA barcoding-based method for rapid identification of Lycium chinensis according to claim 6, wherein, obtaining the trnL-trnF sequence of the sample to be identified through genomic DNA extraction, PCR amplification and sequencing of PCR products; comparing sequence alignment of trnL-trnF sequence of the sample to be identified and the trnL-trnF barcode database of Lycium chinensis samples.
Description:
REFERENCE TO AN ELECTRONIC SEQUENCE LISTING
[0001] The contents of the electronic sequence listing (Sequence-List-NXGQUSN-202008061.txt; Size: 53,000 bytes; and Date of Creation: Mar. 14, 2021) is herein incorporated by reference in its entirety.
CROSS REFERENCE TO RELATED APPLICATION
[0002] The present application is based upon and claims priority to Chinese Application No. 2020103478862, filed on Apr. 28, 2020, and entitled "method for rapid identification of Lycium Chinensis based on DNA barcode", the entire contents of which are incorporated herein by reference
REFERENCE
Technical Field
[0003] The present invention generally relates to the technical field of variety identification for Lycium chinensis, and specifically relates to a method for rapid identification of Lycium Chinensis based on DNA barcode.
Background Art
[0004] Lycium Chinensis (Wolfberry) is rich in LBP (lycium barbarum polysaccharide), betaine, carotenoids, and a variety of unsaturated fatty acids, etc. It has the functions of anti-oxidation, anti-tumor, delaying aging, strengthening immunity, softening blood vessels and lowering blood lipid, etc. It is an important medicinal and edible plant resource in China.
[0005] Compared with breeding of other crops, the breeding of Lycium chinensis has the following shortcomings and drawbacks: firstly, there are relatively few practical production varieties, only four new varieties (Ningqi-1, Ningqi-4, Ningqi-5 and Ningqi-7) are widely used in the production; in addition, they have relatively single uses and cannot adapt to the diversified development of Lycium chinensis industry; secondly, the breeding methods are relatively very few, with long breeding cycle. In recent years, with the rapid development of molecular marker technology, it can provide more effective judgment basis for in-depth understanding of plant gene polymorphism, targeted selection of parents, and early identification of hybrid offspring, etc., thereby improving the breeding efficiency. Through population selection, hybrid breeding, and cell fusion technologies, diversified breeding theoretical system and technical system can be established and new multi-purpose varieties of Lycium chinensis can be cultivated, which is of great significance to the improvement of the research level and sustainable development of Lycium chinensis industry.
[0006] DNA barcoding (DNA barcode) can be used to recognize and identify target varieties using one or a few DNA fragments. It is characterized by simple operation, high accuracy, and rapid identification, etc. Presently, it has become a new research area and hotspot of interest in modern biological taxonomy. In recent years, researchers at home and abroad have carried out active exploration and studies on DNA barcode gene sequences suitable for plant identification.
[0007] Chinese patent application CN110229927A titled "a DNA barcoding-based method for identifying Heiguo Lycium chinensis and uses thereof" provides a method for identifying Heiguo Lycium chinensis based on DNA barcoding. The DNA barcode gene sequence for identifying Heiguo Lycium chinensis is LRITS2 (the second internal transcribed spacer of ribosomal RNA)/LRpsbA-trnH (a non-coding region between the chloroplast genes psbA and trnH). The DNA barcode sequence LRITS2/LRpsbA-trnH for identifying Heiguo Lycium chinensis can be used simultaneously or one of them can be selected. The invention can identify Heiguo Lycium chinensis raw materials efficiently and accurately, to prevent similar confusing or counterfeit products, in addition, it can be used for the identification of fruit powder, fruit shreds, etc. It has important application value and great social benefits to guarantee food safety and consumer rights and interests.
[0008] The article titled "Identification of Lycium Germplasm Resources Based on the matK Barcode Sequence" discloses the identification and analysis of 10 test materials of Lycium germplasm resources using the matK gene as the barcode coding sequence through DNA barcode technology, so as to obtain the theoretical basis of identifying Lycium plants at the molecular level. According to the method, sequence alignment is performed using the ClustalX software, the sequence information is obtained by Mega7.0 and the difference between sequences is compared, finally a phylogenetic tree is constructed based on the K2P model. The matK sequence has a total length of 936 bp, with 933 conserved sites and 3 variable sites. The average GC content is 33.3%, and the base transition transversion value is 1.8. Its phylogenetic tree is divided into two branches. Heiguo, Huangguobian and Changji Lycium chinensis are clustered into a branch, and other varieties are clustered into a branch, and each branch has a high Bootstrap value.
SUMMARY OF THE INVENTION
[0009] One object of the present invention is to provide a method for rapid identification of Lycium chinensis based on DNA barcode. The inventors of this present application found, there exist problems of unclear genetic background of Lycium germplasm resources and lagging in excavation and utilization of excellent resources for the variety identification of Lycium chinensis. The present invention provides a DNA barcode--the trnL-trnF barcode and a method based on it for rapid identification of Lycium chinensis. The present invention provides a chloroplast-based spacer sequence, and also provides a rapid molecular marker identification method of Lycium chinensis with representative germplasm sources such as Heiguo Lycium chinensis, Huangguo Lycium chinensis, Yuanguo Lycium chinensis, Hongzhi Lycium chinensis, local varieties of Lycium barbarum, local varieties of Beifang, Xinjiang, Yunnan, Hebei, as well as hybrid populations, space-mutated populations and ploidy populations, etc, which can be used for the identification of Lycium chinensis varieties.
[0010] The present invention provides a method for identifying Lycium chinensis varieties and determining interspecific relationship based on DNA barcoding. In addition, a trnL-trnF barcode database is provided, which can be used to effectively identify the Lycium chinensis varieties and determine the interspecific relationship of Lycium chinensis, providing effective basis for Lycium chinensis varieties.
[0011] The present invention provides a trnL-trnF barcode and a DNA barcoding-based method for rapid identification of Lycium chinensis.
[0012] The identifiable Lycium chinensis varieties include Ningqi-1 (L. barbarum Linn), Ningqi-2, Ningqi-3, Ningqi-4, Ningqi-5, Ningqi-6, Ningqi-7, Ningnongqi-9, Huangguobian Lycium chinensis (L. barbarum Linn. var. auranticarpum K. F. Ching var. nov.), Heiguo Lycium chinensis (Lycium ruthenicum Murr.), Ningnongqi-5 (L. barbarum Linn), Beifang Lycium chinensis (Lycium chinense MilL. var. potaninii (Pojark.) A. M. Lu), Damaye Lycium chinensis (Damaye (L. barbarum Linn), Baihua Lycium chinensis (Baihua (L. barbarum)) Zhongguo Lycium chinensis (L. Chinense Mill. var.), Yunnan Lycium chinensis (Lycium yunnanense Kuang et A. M. Lu), Mansheng Lycium chinensis (Manshenggouqi (L. barbarum)), Zibing Lycium chinensis (Ziguogouqi (L. barbarum)), Hongzhi Lycium chinensis (Lycium dasystemum), Xiaomaye Lycium chinensis (Xiaomaye (L. barbarum Linn)), Xinjiang Lycium chinensis (Lycium dasystemum Pojark), Mengqi-1, Ningqicai-1, black hybrid space-mutated Lycium chinensis, space-mutated Lycium chinensis, Yuanguo Lycium chinensis, Lycium chinensis-9001, Ninggxia Huangguo Lycium chinensis, Changji Lycium chinensis, Hebei Lycium chinensis, etc.
[0013] Preferably, the DNA barcoding-based method for rapid identification of Lycium chinensis, comprising the following steps:
[0014] 1) extracting genomic DNA from Lycium chinensis samples;
[0015] 2) amplifying trnL-trnF barcode sequence fragments using the extracted genomic DNA as a template and the primers with nucleotide sequences shown in SEQ ID NO. 35 and SEQ ID NO. 36 to obtain a PCR product;
[0016] 3) sequencing the PCR product; and
[0017] 4) constructing a phylogenetic tree and identifying Lycium chinensis.
[0018] Further, in step 1), the genomic DNA is extracted using a kit.
[0019] Preferably, a DNA secure Plant Kit is used to extract genomic DNA in the step 1).
[0020] Further, the DNA extraction using the kit includes the following steps:
[0021] (1A) Extraction of DNA
[0022] The fresh and tender leaves of Lycium chinensis samples to be tested are taken as samples, and put into a 5 ml cryotube and marked, then put them into liquid nitrogen immediately, and stored at -80.degree. C. The total DNA is extracted using a new plant genomic DNA extraction kit (DNA secure Plant Kit).
[0023] The extraction method is as follows:
[0024] i) Taking 100 g sample and grinding in a multifunctional high-efficiency biological sample preparation apparatus with a speed of 22 times/s for 2 minutes. Immediately adding 400 ul of buffer LP1 and 6 ul RNase A (10 mg/ml), oscillating for 1 min and placing at room temperature for 10 min.
[0025] ii) Adding 130 ul of buffer LP2, mix well, and oscillating for 1 min.
[0026] iii) Centrifuging at 12000 rpm for 5 min, and transferring the supernatant to a new centrifuge tube.
[0027] iv) Adding 1.5 times the volume of buffer LP3 (make sure that absolute ethanol has been added before use), shaking immediately and mixing thoroughly for 15 sec. At this time, flocculent precipitation may occur.
[0028] v) Adding the solution and flocculent precipitate obtained in the previous step into an adsorption column CB3 (the adsorption column is put into the collection tube), centrifuging at 12000 rpm for 30 s, discarding the waste liquid, and putting the adsorption column CB3 into the collection tube.
[0029] vi) Adding 600 ul of rinse solution PW to the adsorption column CB3 (check if absolute ethanol has been added before use), centrifuging at 12000 rpm for 30 s, discarding the waste liquid, and then putting the adsorption column CB3 into the collection tube. (Note: If the adsorption column membrane is green, add 500 ul of absolute ethanol to the adsorption column CB3, centrifuge at 12000 rpm for 30 seconds, discard the waste liquid, and put the adsorption column CB3 into the collection tube).
[0030] vii) Repeating the step vi).
[0031] viii) Putting the adsorption column CB3 back into the collection tube, centrifuging at 12000 rpm for 2 minutes, and discarding the waste liquid; placing the adsorption column CB3 at room temperature for 15 min to thoroughly remove the remaining rinse solution in the adsorption material.
[0032] ix) Transferring the adsorption column CB3 to a clean centrifuge tube, and adding 100 ul of elution buffer TE into the middle of the adsorption membrane, leaving it at room temperature for 2 minutes, centrifuging at 12000 rpm for 2 minutes, and collecting the solution into the centrifuge tube.
[0033] x) Repeating step ix). The DNA product is stored at -80.degree. C. to prevent DNA degradation.
[0034] (1B) Detection of DNA Concentration and Purity
[0035] i) Detection by Agarose Gel Electrophoresis
[0036] 1.2% agarose gel is prepared with 1.2 g agarose and 100 ml 1*TAE buffer. 4 ul ddH2O+1 ul DNA sample (undiluted)+1 ul 6*loading buffer are added to a PCR tube to perform agarose gel electrophoresis, and the test results are observed under a UV gel imaging system.
[0037] ii) Detection by UV Spectrophotometer
[0038] The UV spectrophotometer is preheated in advance, and 99 ul ddH2O+1 ul DNA sample (undiluted) are added to the PCR tube for detection. The test results show the sample concentration and the ratio of OD.sub.260/OD.sub.280, and the value of OD.sub.260/OD.sub.280 should be 1.7-1.9. If ddH2O instead of elution buffer is used for elution, the ratio will be lower because the pH value and the presence of ions will affect the light absorption value, but it does not indicate low purity.
[0039] Preferably, in the step 2), the PCR amplification reaction system is: i) pre-denaturizing at 94 reaction sys ii) denaturizing at 94t 94 reaction system is: 55.degree. C. for 30 s (the annealing temperature can be adjusted within the range of 58-60.degree. C.), extending at 72.degree. C. for 2 min, 35 cycles; iii) keeping warm at 72.degree. C. for 10 min; and iv) storing at 4.degree. C.; performing detection of PCR product by 1.0% agarose gel electrophoresis, and observing the amplification results under a UV gel imaging system.
[0040] Further, in the DNA barcoding-based method for rapid identification of the present invention, step 3) is sequencing the PCR product obtained in step 2). The sequencing method in the step 3) is as follows:
[0041] (3A) PCR Product Cloning:
[0042] Recovering target band(s) with AxyPrep DNA gel recovery kit, and detecting by 1.2% agarose gel electrophoresis. The purified target DNA is used as a sequencing template. The recovered product is ligated to the T vector (pGEM-T) using pLB zero background rapid cloning kit, then transferred to E. coli DH5a for culture. The blue-white spot screening method is used to screen positive colonies and PCR detection of colonies is carried out. The amplification results are observed under a UV gel imaging system.
[0043] (3B) Sequencing and Analysis:
[0044] Sequencing the DNA sequence of the colony of positive clone, and performing homology sequences alignment with the published sequence in NCBI, to analyze the sequence. The operations are as follows:
[0045] In the present invention, after performing PCR detection on positive colonies, the colonies containing target fragments (positive colony) are cultured in LB liquid medium, and 3 colonies are selected for each material and sent to Sangon Biotech (Shanghai) Co., Ltd. for sequencing by Sanger method, to obtain trnL-trnF sequence.
[0046] The obtained DNA barcode gene sequence is aligned with the published sequence in the NCBI database for homology. The Clustal X program is used to align the Lycium chinensis DNA barcode gene sequence respectively. The base composition of the target sequence, the frequency of base variation between sequences and the frequency of transition and transversion between sequences and their ratios are calculated by the phylogenetic analysis software MEGA7.0, and a phylogenetic tree is constructed to establish a trnL-trnF barcode database for identification of varieties of Lycium chinensis.
[0047] Another object of the present invention is to provide a trnL-trnF barcode database of Lycium chinensis samples constructed by the above method, comprising 34 trnL-trnF barcodes, and the nucleotide sequence thereof is shown in SEQ ID NO. 1-34.
[0048] Another object of the present invention is to provide uses of the trnL-trnF barcode database of Lycium chinensis samples in identifying Lycium chinensis varieties.
[0049] Preferably, uses of the trnL-trnF barcode database of Lycium chinensis samples in identifying Lycium chinensis varieties comprise the following step:
[0050] performing sequence alignment of trnL-trnF sequence of the sample to be identified and the trnL-trnF barcode database of Lycium chinensis samples to identify the Lycium chinensis varieties.
[0051] Preferably, the method for obtaining the trnL-trnF sequence of the sample to be identified involves genomic DNA extraction, PCR amplification, and sequencing of PCR products, to obtain the corresponding sequence, and the operation steps are the same as steps 1), 2) and 3) in the DNA barcoding-based identification method of Lycium chinensis varieties.
[0052] The present invention can achieve the following beneficial effects:
[0053] (1) A method for identification of Lycium chinensis varieties based on trnL-trnF gene is established for the first time. It can be used to identify Lycium barbarum, Huangguobian Lycium chinensis, Heiguo Lycium chinensis, Beifang Lycium chinensis, Damaye Lycium chinensis, Zhongguo Lycium chinensis, Yunnan Lycium chinensis, Mansheng Lycium chinensis, Zibing Lycium chinensis, Hongzhi Lycium chinensis, etc.
[0054] (2) The genetic diversity and genetic relationship of Lycium are revealed based on trnL-trnF gene, to provide an effective basis for the identification, classification and phylogenic study of Lycium chinensis varieties.
[0055] (3) It can identify Lycium chinensis varieties accurately based on trnL-trnF gene.
[0056] (4) The present invention further provides trnL-trnF barcode database of Lycium chinensis samples, covering Heiguo Lycium chinensis, Huangguo Lycium chinensis, Yuanguo Lycium chinensis, Hongzhi Lycium chinensis, local varieties of Lycium barbarum, local varieties of Beifang, Xinjiang, Yunnan, Hebei, as well as hybrid populations, space mutation populations and ploidy populations, etc, all of them are representative germplasms of Lycium chinensis nationwide; Therefore, it can provide an effective basis for the classification and identification of Lycium chinensis varieties.
[0057] By performing sequence alignment of trnL-trnF sequence of the sample to be identified and the trnL-trnF barcode database of Lycium chinensis samples, the Lycium chinensis varieties can be effectively identified and their interspecific relationship can be determined. By identifying the interspecific relationship between Lycium chinensis to be tested and Lycium chinensis in the barcode database, it provides an effective basis for the classification and identification of Lycium chinensis varieties.
BRIEF DESCRIPTION OF THE DRAWINGS
[0058] FIG. 1 shows the DNA extraction and detection result of the Lycium chinensis samples in Example 1 of the present invention, of which, lane M: marker (DL2000 DNA molecular marker); (a) DNA detection results of lanes 1 to 24 corresponding to sample numbers 1 to 24; (b) DNA detection results of lanes 25 to 34 corresponding to sample numbers 25 to 34.
[0059] FIG. 2 shows the PCR amplification result of trnL-trnF sequence of some Lycium chinensis samples in Example 1 of the present invention, of which, lane M: marker (DL2000 DNA molecular marker); lanes 1-2: PCR products of Mansheng Lycium chinensis; lanes 4-5: PCR products of Yuanguo Lycium chinensis; lanes 7-8: PCR products of Zibing. Lanes 1-2, 4-5 and 7-8 show twice PCR results of different samples.
[0060] FIG. 3 shows the trnL-trnF sequence cloning result of Lycium chinensis sample No. 32 in Example 1 of the present invention. Of which, M: marker (DL2000 DNA molecular marker), lane 1: negative clone; lanes 2 to 6: positive clones (results of multiple repeated tests).
[0061] FIG. 4 shows the NJ phylogenetic tree constructed from the trnL-trnF barcodes in the trnL-trnF barcode database of Lycium chinensis samples in Example 1 of the present invention.
[0062] FIG. 5 shows the NJ phylogenetic tree of Lycium chinensis samples to be identified and part of the trnL-trnF barcodes in the database in Example 1 of the present invention.
[0063] FIG. 6 shows the NJ phylogenetic tree of Lycium chinensis samples to be identified and part of the trnL-trnF barcodes in the database in Example 2 of the present invention.
DETAILED DESCRIPTION OF THE EMBODIMENTS
[0064] The present invention is described below through specific embodiments. Unless otherwise specified, the technical means used in the present invention are all methods known to those skilled in the art. In addition, the embodiments should be understood as illustrative rather than limiting the scope of the invention, and the essence and scope of the present invention are only defined by the appended claims. For those skilled in the art, without departing from the essence and scope of the present invention, various changes or modifications to the material components and amount in these embodiments shall also fall into the scope of protection of the present invention. The present invention will be further described below in conjunction with specific embodiments.
Example 1 Identification of Lycium chinensis Samples and Construction of trnL-trnF Barcode Database of Lycium chinensis Samples
[0065] The invention will be further described in conjunction with specific embodiments.
[0066] 1. Samples from trnL-trnF Barcode Database of Lycium chinensis Samples
[0067] In order to construct a trnL-trnF barcode database of Lycium chinensis samples, a total of 34 samples with partial similar morphology from different regions are collected, as shown in Table 1.
TABLE-US-00001 TABLE 1 Lycium plant samples (trnL-trnF barcode database of Lycium chinensis samples) Germplasm Resource No. Latin name name Code type SEQ ID NO 1 Ningqi No. 1 (L. barbarum Ningqi-1 Ningqi1 Bred variety 1 Linn) 2 Ningqi No. 2 (L. barbarum Ningqi-2 Ningqi2 Bred variety 2 Linn) 3 Ningqi No. 3 (L. barbarum Ningqi-3 Ningqi3 Bred variety 3 Linn) 4 Ningqi No. 4 (L. barbarum Ningqi-4 Ningqi4 Bred variety 4 Linn) 5 Ningqi No. 5 (L. barbarum Ningqi-5 Ningqi5 Bred variety 5 Linn) 6 Ningqi No. 6 (L. barbarum Ningqi-6 Ningqi6 Bred variety 6 Linn) 7 Ningqi No. 7 (L. barbarum Ningqi-7 Ningqi7 Bred variety 7 Linn) 8 L. barbarum Linn Ningnongqi-9 Ningnongqi9 Bred variety 8 9 L. barbarum Linn. Huangguobian Huangguobian Bred variety 9 var. auranticarpum K. F. Ching var. nov. 10 Mengqi 1(L. barbarum) Mengqi-1 Mengqi1 Bred variety 10 From printed publication 5 11 Lycium ruthenicum Murr. Heiguo Heiguo Bred variety 11 Lycium chinensis 12 From printed publication 2 Ningqicai-1 Ningqicai1 Bred variety 12 13 L. barbarum Linn Ningnongqi-5 W-12-30 Space mutant 13 14 From printed publication 1 HZ-13-01 HZ-13-01 Black hybrid 14 space mutant 15 From printed publication 1 ZH-13-08 ZH-13-08 Space mutant 15 16 From printed publication 1 W-12-27 W-12-27 Black hybrid 16 space mutant 17 From printed publication 1 W-11-15 W-11-15 Black hybrid 17 space mutant 18 From printed publication 1 W-13-26 W-13-26 Black hybrid 18 space mutant 19 From printed publication 1 W-12-26 W-12-26 Black hybrid 19 space mutant 20 Lycium chinenseMilL. var. Beifang Beifang Introduced 20 potaninii (Pojark.) A. M. Lu Lycium variety chinensis 21 From printed publication 1 Yuanguo Yuanguo Bred variety 21 Lycium chinensis 22 From printed publication 4 9001 9001 Bred variety 22 Ninggxia 23 From printed publication 3 Huangguo Huangguo Bred variety 23 24 Damaye (L. barbarum Linn) Damaye Damaye Bred variety 24 25 Baihua(L. barbarum) Baihua Baihua Introduced 25 variety 26 L. chinenseMill. var. Zhongguo Zhongguo Introduced 26 Lycium variety chinensis 27 Lycium yunnanenseKuang et Yunnan Yunnan Introduced 27 A. M. Lu Lycium variety chinensis 28 Manshenggouqi (L. bararum) Mansheng Mansheng Introduced 28 Lycium variety chinensis 29 Ziguogouqi (L. barbarum) Zibing Zibing Introduced 29 variety 30 Lycium dasystemum Hongzhi Hongzhi Introduced 30 variety 31 From printed publication 1 Hebei Hebei Introduced 31 Lycium variety chinensis 32 Xiaomaye (L. barbarum Linn) Xiaomaye Xiaomaye Bred variety 32 33 From printed publication 1 Changji Changji Introduced 33 Lycium variety chinensis 34 Lycium dasystemumPojark Xinjiang Xinjiang Introduced 34 Lycium variety chinensis Note: (Variety numbers 14-19, 21, 31, and 33 are varieties disclosed in the printed publication 1: "Wan Ru, Wang Yajun, An Wei, et al. Identification of 21 Lycium plants based on psbA-trnH sequence barcodes [J]. Jiangsu Agricultural Sciences, 2019, 47(01): 64-67."; variety number 12 is from Table 1 in the printed publication 2: "a new method of identifying vegetable Lycium chinensis -nrDNA ITS sequencing method (English)[J]. Agricultural Science & Technology(2): 64-65 + 111"; Variety number 23 is from Table 1 in the printed publication 3: "Shi Zhigang. Genetic diversity of 18 Ningxia wolfberry resources based on nrDNA ITS sequence [J]. Anhui Agricultural Sciences (24): 10379-10380"; variety number 22 is from Table 1 in the publication 4: "Shi Zhigang. Genetic diversity of 18 Ningxia wolfberry resources based on nrDNA ITS sequence [J]. Anhui Agricultural Sciences (24): 10379-10380"; variety number 10 is from the publication 5: "Yin Yue, An Wei, Zhao Jianhua, et al. Transcriptome SSR information analysis and molecular marker development Heiguo Lycium chinensis [J]. Journal of Zhejiang Agriculture and Forestry University, 2019, 36(02): 215-221."). 2. Identification of Lycium chinensis samples and construction of the trnL-trnF barcode database of Lycium chinensis samples
[0068] 1) Extraction of DNA
[0069] In the Lycium chinensis germplasm resource nursery of Lycium Engineering Center, Ningxia Academy of Agricultural and Forestry Sciences, 34 parts of fresh and tender leaves of Lycium plants are taken as samples, and put into a 5 ml cryotube and marked, then put them into liquid nitrogen immediately, and stored at -80.degree. C. Sampling time: June 2018, sampling location: National Lycium Chinensis Germplasm Resource Bank in Yinchuan City, Ningxia.
[0070] The total DNA is extracted using a new plant genomic DNA extraction kit (DNA secure Plant Kit). The extraction method is as follows:
[0071] i) 100 g sample was taken and grinded in a multifunctional high-efficiency biological sample preparation apparatus at 22 times/s for 2 minutes. Immediately 400 ul of buffer LP1 and 6 ul RNase A (10 mg/ml) was added. The mixture was oscillate for 1 min and placed at room temperature for 10 min.
[0072] ii) 130 ul of buffer LP2 was added, mixed well, and subjected to oscillate for 1 min. iii) Centrifugation at 12000 rpm for 5 min was performed. The supernatant was transferred to a new centrifuge tube.
[0073] iv) 1.5 times the volume of buffer LP3 (check if absolute ethanol has been added before use) was added. The mixture was immediately shaken and mixed thoroughly for 15 s. At this time, flocculent precipitate may occur.
[0074] v) The solution and flocculent precipitate obtained in the previous step iv) were added into an adsorption column CB3 (the adsorption column is put into the collection tube). After centrifugation at 12000 rpm for 30 s, the waste liquid was discarded, and the adsorption column CB3 was putted into the collection tube.
[0075] vi) 600 ul of rinse solution PW was added to the adsorption column CB3 (check if absolute ethanol has been added before use). After centrifugation at 12000 rpm for 30 s, the waste liquid was discarded, and the adsorption column CB3 was putted into the collection tube. (Note: If the adsorption column membrane was green, added 500 ul of absolute ethanol to the adsorption column CB3, centrifuged at 12000 rpm for 30 seconds, discarded the waste liquid, and putted the adsorption column CB3 into the collection tube).
[0076] vii) Repeated the step vi).
[0077] viii) Putted the adsorption column CB3 back into the collection tube, centrifuged at 12000 rpm for 2 minutes, and discarded the waste liquid. The adsorption column CB3 was placed at room temperature for 15 min to thoroughly remove the remaining rinse solution in the adsorption material.
[0078] ix) Transferred the adsorption column CB3 to a clean centrifuge tube, and added 100 ul of elution buffer TE into the middle of the adsorption membrane, left it at room temperature for 2 minutes, centrifuged at 12000 rpm for 2 minutes, and collected the solution into the centrifuge tube.
[0079] x) Repeated step ix). The DNA product was stored at -80.degree. C. to prevent DNA degradation.
[0080] 2) Detection of DNA Concentration and Purity
[0081] i) Detection by Agarose Gel Electrophoresis
[0082] 1.2% agarose gel is prepared with 1.2 g agarose and 100 ml 1*TAE buffer. 4 ul ddH2O+1 ul DNA sample (undiluted)+1 ul 6*loading buffer were added to a PCR tube to perform agarose gel electrophoresis, and the test results were observed under a UV gel imaging system, as shown in FIG. 1.
[0083] ii) Detection by UV Spectrophotometer
[0084] The UV spectrophotometer was preheated in advance, and 99 ul ddH2O+1 ul DNA sample (undiluted) were added to the PCR tube for detection. The test results showed the sample concentration and the ratio of OD.sub.260/OD.sub.280, and the value of OD.sub.260/OD.sub.280 should be 1.7-1.9. If ddH2O instead of elution buffer was used for elution, the ratio will be lower because the pH value and the presence of ions will affect the light absorption value, but it did not indicate low purity.
[0085] 3) PCR Amplification
[0086] The DNA obtained in the step 1) was used as a template, and primers and other reagents required for amplification were added to perform PCR amplification. Refer to Table 2 and Table 3 for specific primers and amplification systems.
[0087] (1) Primer Design
[0088] The designed primer was as follows:
TABLE-US-00002 TABLE 2 Universal primers for DNA barcode gene trnL-trnF Primer SEQ Primer sequence name ID NO (5' to 3') trnL-trnF-F 35 ATCGGTATCTAATGAATTCAATG trnL-trnF-R 36 CCCATACAAATTAATCATGTGCC
[0089] (2) PCR Reaction System
[0090] The genomic DNAs of the test material were amplified by PCR with the above primers. The amplification system was shown in Table 3.
TABLE-US-00003 TABLE 3 DNA barcode reaction system Amplification system 50 ul system PCR-Grade Water 15.0 ul 2X Ex taq Buffer (takara) 25.0 .mu.l dNTP Mix (10 mM) 1.0 .mu.l Ex taq (takara) 1.0 .mu.l DNA 5.0 .mu.l primer F (10X) 1.5 .mu.l primer R (10X) 1.5 .mu.l
The PCR reaction procedure: i) pre-denaturizing at 94.degree. C. for 2 minutes; ii) denaturizing at 94.degree. C. for 30 s, annealing at 55.degree. C. for 30 s (the annealing temperature can be adjusted within the range of 58-60.degree. C.), extending at 72.degree. C. for 2 min, 35 cycles of denaturizing, annealing and extending; iii) preservation at 72.degree. C. for 2 min; iv) storing at 4.degree. C. Performed detection of PCR product by 1.0% agarose gel electrophoresis, and observed the amplification results under a UV gel imaging system. Taking the PCR products of Mansheng Lycium chinensis, Dahuangguo and Zibing as examples, results are shown in FIG. 2. According to the position of DNA Marker corresponding to the trnL-trnF sequence, the total length of the trnL-trnF sequence is about 1200 bp.
[0091] 4) PCR Product Cloning:
[0092] The target band was recovered with AxyPrep DNA gel recovery kit, and detected by 1.2% agarose gel electrophoresis. The purified target DNA was used as a sequencing template. The recovered product was ligated to the T vector (pGEM-T) using Lethal Based Simple Fast Cloning Kit, then transferred to E. coli DH5a for culture. The blue-white spot screening method was used to screen positive colonies and PCR detection of colonies was carried out. The amplification results were observed under a UV gel imaging system. Taken Xiaomaye Lycium chinensis (No. 32) as an example, as shown in FIG. 3, the trnL-trnF gene had good amplification results, with clear bands and obvious cloning results.
[0093] 5) Sequencing and Analysis:
[0094] The DNA sequencing of the screened bacteria liquid with positive colonies was performed, and the homology sequences alignment was performed with the published sequence in NCBI (National Center for Biotechnology Information) database. The Clustal X program was used to align the Lycium chinensis DNA barcode gene sequence, respectively. The operations were as follows:
[0095] after performing PCR detection on positive colonies, the colonies containing target fragments were cultured in LB liquid medium, and 3 colonies were selected for each material and sent to Sangon Biotech (Shanghai) Co., Ltd. for sequencing, to obtain 34 parts of trnL-trnF sequence.
[0096] The obtained DNA barcode gene sequence was aligned with the published sequence in the NCBI database for homology. The Clustal X program was used to align the Lycium chinensis DNA barcode gene sequence respectively, and the primer area was removed. The phylogenetic analysis software MEGA7.0 was used to conduct analysis, the obtained trnL-trnF sequence had a total length of 1156 bp, 1138 conservative sites, accounting for 98.4%, and 18 variation sites, accounting for 1.6%, including 9 information sites and 9 singleton sites. The base transition and transversion value is 1.2 and the average GC content is 35.7%.
[0097] After sequence alignment analysis, for 12 samples (Huangguobian, Heiguo Lycium chinensis, Ningnongqi-5, HZ-13-01, ZH-13-08, W-12-27, W-11-15, W-13-26, W-12-26, Zhongguo Lycium chinensis, Yunnan Lycium chinensis, Changji Lycium chinensis), a sequence segment with the length of 40 bp is inserted at 61 bp, namely, TGACATCACAACGAGATCCTAATCTCAAAACAAAAAGAAA, and a base A is deleted at 791 bp. Except for Zhongguo Lycium chinensis and Yunnan Lycium chinensis, base transitions happen at 38 bp, 44 bp, 49 bp, 50 bp, 323 bp, 569 bp, and 731 bp, and base transversions happen at 762 bp for the remaining 10 samples. In addition, 3 bases (TCT) are inserted at 45 bp for the 10 samples. Except for 4 samples of Huangguobian, Zhongguo Lycium chinensis, Yunnan Lycium chinensis, and Changji Lycium chinensis, the other 8 samples have a 24 bp sequence inserted at 487 bp, namely, GAATTGGTGTGAATCGATTCTACA. The base transitions happen at 1025 bp for Heiguo Lycium chinensis, and base transitions happen at 236 bp and 263 bp for Beifang Lycium chinensis. The base transitions happen at 253 bp and 1131 bp for Mansheng Lycium chinensis, transition from T to C. Ningqi-4 and Yuananguo Lycium chinensis have sequence deletion of 6 bp (AAGGAA) at 55 bp, and sequence deletion of 10 bp (CCGACCCCCT) at 732 bp. Xinjiang Lycium chinensis has transition from A to G at 605 bp. Ningqicai-1 has transversion of 3 bases from TAT to ATA at 1151 bp.
[0098] Through sequence alignment and clustering analysis, the phylogenetic tree is constructed as shown in FIG. 4. The clustering graph of trnL-trnF barcode sequence is divided into two branches, Zhongguo Lycium chinensis, Yunnan Lycium chinensis, space mutant of Heiguo hybrids, Huangguobian, Heiguo Lycium chinensis and Changji Lycium chinensis and Changji Lycium chinensis are clustered into one branch, among which, Zhongguo Lycium chinensis, Yunnan Lycium chinensis are separate groups, which have far genetic relationship with the other varieties. The remaining 22 germplasms are clustered together, among which Ningqi-4 and Yuanguo are clustered together, with the closest genetic relationship. According to the trnL-trnF sequence, 34 germplasm materials can be basically identified (shown in FIG. 4), and each branch obtains a bootstrap value greater than 50%. This result is consistent with the actual genetic relationship of 34 samples, indicating that trnL-trnF sequence can be used to identify Lycium chinensis varieties.
[0099] This proves that the DNA barcode provided by the present invention can be used to construct a Lycium chinensis phylogenetic tree, and then used in the study of the intraspecific and interspecific phylogeny of Lycium chinensis. It further proves the effectiveness and feasibility of the DNA barcode provided by the present invention in identification, classification and phylogenetic study of Lycium chinensis varieties. In addition, in the embodiments of the present invention, trnL-trnF barcode database is constructed based on the barcode trnL-trnF sequences. The database covers Heiguo Lycium chinensis, Huangguo Lycium chinensis, Yuanguo Lycium chinensis, Hongzhi Lycium chinensis, local varieties of Lycium barbarum, local varieties of Beifang, Xinjiang, Yunnan, Hebei, as well as hybrid populations, space mutation populations and ploidy populations, etc, all of them are representative germplasms of Lycium chinensis nationwide; Therefore, it can provide an effective basis for the classification and identification of Lycium chinensis varieties.
[0100] By performing sequence alignment of trnL-trnF sequence of the sample to be identified and the trnL-trnF barcode database of Lycium chinensis samples, the Lycium chinensis varieties can be effectively identified and their interspecific relationship can be determined. By identifying the interspecific relationship between Lycium chinensis to be tested and Lycium chinensis in the barcode database, it provides an effective basis for the classification and identification of Lycium chinensis varieties.
Experimental Example 1 Identification of Lycium chinensis Varieties Using Barcode Database
[0101] 1. Sampling
[0102] Three samples of Lycium chinensis to be tested (Nos. Tianjing-3, Zhutong, Baitiao) were selected, and sequence alignment was performed with barcodes of part of Lycium chinensis samples trnL-trnF barcode database in Example 1 for identification. The Lycium chinensis variety cannot be identified by morphological methods. In this experimental example, DNA barcode based method of the present invention was used for identification.
TABLE-US-00004 TABLE 4 Number and origin of Lycium chinensis samples to be tested Type of sample Origin Tianjing-3 Hebei Zhutong Ningxia Zhongning (Xinyang) Baitiao Ningxia
[0103] 2. The procedures for DNA extraction and concentration detection, PCR amplification, PCR product cloning, sequence sequencing and analysis are the same as those in Example 1.
[0104] 3. Analysis of Sequence Results
[0105] The sequence alignment and clustering analysis were performed by MEGA7.0 software. The phylogenetic tree was constructed using NJ method. The cluster graph of trnL-trnF barcode sequence was divided into two branches. The sample to be tested Baitiao and Yuananguo Lycium chinensis (barcode database, No. 21) were clustered together, with the closest genetic relationship, indicating that Baitiao has a closer genetic relationship with Yuananguo Lycium chinensis and Ningqi-4 (barcode database, No. 4) in the 34 trnL-trnF barcode databases, and has close genetic relationship with Ningqi-1 (barcode database, No. 1). The samples to be tested Zhutong and Tianjing-3 are separate groups. Zhutong and Ningqi-1 have close genetic relationship; Tianjing-3 and Huangguobian (barcode database, No. 9) and Heiguo (barcode database, No. 11) have close genetic relationship. The Bootstrap value of each branch is greater than 60, which has a high credibility, indicating that the barcode database constructed based on trnL-trnF barcode sequence and the method of the present invention can be used to perform classification and identification of varieties for samples from different regions.
[0106] The genetic distance calculation using MEGA7.0 and K2P model (Kimura 2-parameter model) is shown in Table 5. The minimum genetic distance between Ningqi-1 and Yuananguo Lycium chinensis is 0.00093, and the maximum genetic distance between Baitiao and Heiguo Lycium chinensis is 0.0110186.
TABLE-US-00005 TABLE 5 The genetic distance analysis of Lycium chinensis varieties identified by trnL-trnF Yuanguo Heiguo Lycium Lycium Ningqi-1 chinensis Huangguobian chinensis Tianjing-3 Zhutong Baitiao Ningqi-1 Yuanguo 0.000933 Lycium chinensis Huangguobian 0.007390 0.008446 Heiguo 0.008321 0.009392 0.000885 Lycium chinensis Tianjing-3 0.001842 0.002806 0.008922 0.009822 Zhutong 0.001839 0.002802 0.009250 0.010183 0.003687 Baitiao 0.001840 0.001867 0.009253 0.010186 0.003690 0.003684
Experimental Example 2 Identification of Heiguo Lycium chinensis Varieties Using Barcode Database
[0107] 1. Sampling
[0108] Three samples of Lycium chinensis to be tested (Nos. B2, B3, H-13-08-05) are selected. The DNA barcode technology is used for identification in this exoerimental example, and sequence alignment is performed with barcodes of part of Lycium chinensis samples trnL-trnF barcode database in Example 1. The Lycium chinensis varieties cannot be identified by morphological methods.
TABLE-US-00006 TABLE 6 Number and origin of Lycium chinensis samples to be tested Sample type Origin B2 Qinghai B3 Qinghai H-13-08-05 Ningxia
[0109] 2. The procedures for DNA extraction and concentration detection, PCR amplification, PCR product cloning, sequence sequencing and analysis are the same as those in Example 1.
[0110] 3. Analysis of Sequence Results
[0111] The sequence alignment and clustering analysis are performed by MEGA7.0 software. The phylogenetic tree is constructed using NJ method as shown in FIG. 6. The cluster graph of trnL-trnF barcode sequence is divided into two branches. The Hongguo Lycium chinensis and Heiguo Lycium chinensis are clearly identified. Ningqi-1 and Zhongguo Lycium chinensis are clustered together, with the closest genetic relationship, belonging to Hongguo Lycium chinensis, and their bootstrap value with other six Heiguo Lycium chinensis is 100, with high degree of credibility.
[0112] Among the 6 Heiguo Lycium chinensis samples, the test samples B2 and H-13-08-05 are clustered together, with the closest genetic relationship, and their bootstrap value with Heiguo Lycium chinensis (barcode database, No. 11) is 60, with credibility. Heiguo Lycium chinensis, W-12-27 (barcode database, No. 16), test sample B3 are separate groups. The bootstrap value between the test sample B3 and W-12-27 is 63, with credibility, and the bootstrap value with Heiguo Lycium chinensis is 39, indicating that Heiguo Lycium chinensis samples that cannot be morphologically identified in different regions can be classified and identified based on the trnL-trnF barcode sequence and the barcode database constructed by the method of the present invention, but the samples have high similarity, so it is only used as preliminary identification.
[0113] The genetic distance calculation using MEGA7.0 and K2P model (Kimura 2-parameter model) is shown in Table 7. The minimum genetic distance between Ningqi-1 and Zhongguo Lycium chinensis is 0.00000, and the maximum genetic distance between Ningqi-1 and H-13-08-05 is 0.011122.
TABLE-US-00007 TABLE 7 Genetic distance analysis of Heiguo Lycium chinensis identified by trnL-trnF Zhongguo Heiguo Lycium Lycium Ningqi-1 chinensis chinensis W-12-27 B3 B2 H-13-08-05 Ningqi-1 Zhongguo 0.000000 Lycium chinensis Heiguo 0.008321 0.008024 Lycium chinensis W-12-27 0.007390 0.007127 0.000885 B3 0.008321 0.008024 0.001771 0.000885 B2 0.009250 0.008920 0.002658 0.001771 0.002658 H-13-08-05 0.011122 0.010724 0.004441 0.003549 0.004441 0.005329
Sequence CWU
1
1
3611089DNANingqi No.1 (L. barbarum Linn) 1atcggtatct aatgaattca atggttccag
tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga
cttaattgga ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga
aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac
aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga
gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt
gaaggataaa cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg
aatccgtatt ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga
aagaatcgaa tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga
actgattaat cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca
atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc
tctatcccca aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca
aattacttat ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc
tttttcttat cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc
aaggaatccc tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt
acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg
acttttgtcc ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt
gggaatagcc gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag
ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
108921089DNANingqi No.2 (L. barbarum
Linn) 2atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg
60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac
120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc
180tgagccaaat cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga
240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca
300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga
360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag
420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt
480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga
540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc
600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc
660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc
720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata
780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc
840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa
900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc
960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga
1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat
1080ttgtatggg
108931089DNANingqi No.3 (L. barbarum Linn) 3atcggtatct aatgaattca
atggttccag tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag
acgctacgga cttaattgga ttgagccttg gtatggaaac 120ttactaagtg atcactttca
aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct
gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg aagctattct
aacaaatgga gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa
agaatgaagt gaaggataaa cgtatataca tacgtattga 360atactctatc aaatgattaa
tgacgacccg aatccgtatt ttttctataa aaaatagaag 420aattggtgtg aatcgattct
acattgaaga aagaatcgaa tattcattga tcaaatcatt 480cactccatag tctgatagat
cttttgaaga actgattaat cggacgagaa taaagataga 540gtcccgttct acatgtcaat
accggcaaca atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg
ttcaagtccc tctatcccca aaaagactat ttcactcccc 660aactccgacc ccctttcctt
agcggttcca aattacttat ctttctcatt cactctattc 720tttatagaaa tggatttgag
cgtaaatggc tttttcttat cacaagtctt gtgatatata 780tgatacacat agaaatgaac
atctttgagc aaggaatccc tagttgaatg attcccgatc 840aatacaatat cattactcat
actgaaactt acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat
tttttaatcg acttttgtcc ttttaattga catagacccc 960agttctctaa taaaatgagg
atactacatt gggaatagcc gggatagctc agttggtaga 1020gcagaggact gaaaatcctc
gtgtcaccag ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
108941073DNANingqi No.4 (L.
barbarum Linn) 4atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagga
agggggatat 60ggcgaaatcg gtagacgcta cggacttaat tggattgagc cttggtatgg
aaacttacta 120agtgatcact ttcaaattca gagaaaccct ggaattaaca aaaatgggca
atcctgagcc 180aaatcctgtt ttctgaaaac aaacaaaggt tcagaaaaaa aggataggtg
cagagactca 240atggaagcta ttctaacaaa tggagttaaa tgcgttggta gaggaatctt
tacatcgaaa 300cttcagaaag aaaaagaatg aagtgaagga taaacgtata tacatacgta
ttgaatactc 360tatcaaatga ttaatgacga cccgaatccg tattttttct ataaaaaata
gaagaattgg 420tgtgaatcga ttctacattg aagaaagaat cgaatattca ttgatcaaat
cattcactcc 480atagtctgat agatcttttg aagaactgat taatcggacg agaataaaga
tagagtcccg 540ttctacatgt caataccggc aacaatgaaa tttatagtaa gaggaaaatc
cgtcgacttt 600aaaaatcgtg agggttcaag tccctctatc cccaaaaaga ctatttcact
ccccaacttt 660ccttagcggt tccaaattac ttatctttct cattcactct attctttata
gaaatggatt 720tgagcgtaaa tggctttttc ttatcacaag tcttgtgata tatatgatac
acatagaaat 780gaacatcttt gagcaaggaa tccctagttg aatgattccc gatcaataca
atatcattac 840tcatactgaa acttacaaag tcatcttttt gaagatcgaa gaaattcccc
ggctttgata 900aaatttttta atcgactttt gtccttttaa ttgacataga ccccagttct
ctaataaaat 960gaggatacta cattgggaat agccgggata gctcagttgg tagagcagag
gactgaaaat 1020cctcgtgtca ccagttcaaa tctggttcct ggcacatgat taatttgtat
ggg 107351089DNANingqi No.5 (L. barbarum Linn) 5atcggtatct
aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg
aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac 120ttactaagtg
atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat
cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg
aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc
agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga 360atactctatc
aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag 420aattggtgtg
aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt 480cactccatag
tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga 540gtcccgttct
acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa
atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc 660aactccgacc
ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc 720tttatagaaa
tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata 780tgatacacat
agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc 840aatacaatat
cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct
ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc 960agttctctaa
taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga 1020gcagaggact
gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
108961089DNANingqi
No.6 (L. barbarum Linn) 6atcggtatct aatgaattca atggttccag tataaatgaa
agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga cttaattgga
ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga aaccctggaa
ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac aaaggttcag
aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga gttaaatgcg
ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa
cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg aatccgtatt
ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga aagaatcgaa
tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga actgattaat
cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca atgaaattta
tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca
aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca aattacttat
ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc tttttcttat
cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc aaggaatccc
tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt acaaagtcat
ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg acttttgtcc
ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt gggaatagcc
gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg
gttcctggca catgattaat 1080ttgtatggg
108971089DNANingqi No.7 (L. barbarum Linn)
7atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg
60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac
120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc
180tgagccaaat cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga
240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca
300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga
360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag
420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt
480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga
540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc
600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc
660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc
720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata
780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc
840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa
900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc
960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga
1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat
1080ttgtatggg
108981089DNAL. barbarum Linn 8atcggtatct aatgaattca atggttccag tataaatgaa
agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga cttaattgga
ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga aaccctggaa
ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac aaaggttcag
aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga gttaaatgcg
ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa
cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg aatccgtatt
ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga aagaatcgaa
tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga actgattaat
cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca atgaaattta
tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca
aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca aattacttat
ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc tttttcttat
cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc aaggaatccc
tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt acaaagtcat
ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg acttttgtcc
ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt gggaatagcc
gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg
gttcctggca catgattaat 1080ttgtatggg
108991131DNAL. barbarum Linn. var.auranticarpum
K.F.Ching var. nov. 9atcggtatct aatgaattca atggttccag tataaataaa
agattctatt gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa caaaaagaaa
gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc ttggtatgga
aacttactaa gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa aaatgggcaa
tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa ggataggtgc
agagactcaa tggaagctat 300tctaacaaat ggagttaaat gcattggtag aggaatcttt
acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat acatacgtat
tgaatactct atcaaatgat 420taatgacgac ccgaatccgt attttttcta taaaaaatag
aagaattggt gtgaatcgat 480tctacattga agaaagaatc gaatattcat tgatcaaatc
attcactcca tagtctgata 540gatcctttga agaactgatt aatcggacga gaataaagat
agagtcccgt tctacatgtc 600aataccggca acaatgaaat ttatagtaag aggaaaatcc
gtcgacttta aaaatcgtga 660gggttcaagt ccctctatcc ccaaaaagac tatttcactc
cccaaccccg accccctttc 720cttagcggtt ccaaattcct tatctttctc attcactcta
ttcttttaga aatggatttg 780agcgtaaatg gctttttctt atcacaagtc ttgtgatata
tatgatacac atagaaatga 840acatctttga gcaaggaatc cctagttgaa tgattcccga
tcaatacaat atcattactc 900atactgaaac ttacaaagtc atctttttga agatcgaaga
aattccccgg ctttgataaa 960attttttaat cgacttttgt ccttttaatt gacatagacc
ccagttctct aataaaatga 1020ggatactaca ttgggaatag ccgggatagc tcagttggta
gagcagagga ctgaaaatcc 1080tcgtgtcacc agttcaaatc tggttcctgg cacatgatta
atttgtatgg g 1131101089DNAMengqi 1L. barbarum 10atcggtatct
aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg
aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac 120ttactaagtg
atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat
cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg
aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc
agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga 360atactctatc
aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag 420aattggtgtg
aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt 480cactccatag
tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga 540gtcccgttct
acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa
atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc 660aactccgacc
ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc 720tttatagaaa
tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata 780tgatacacat
agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc 840aatacaatat
cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct
ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc 960agttctctaa
taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga 1020gcagaggact
gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
1089111131DNALycium ruthenicum Murr. 11atcggtatct aatgaattca atggttccag
tataaataaa agattctatt gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa
caaaaagaaa gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc
ttggtatgga aacttactaa gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa
aaatgggcaa tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa
ggataggtgc agagactcaa tggaagctat 300tctaacaaat ggagttaaat gcattggtag
aggaatcttt acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat
acatacgtat tgaatactct atcaaatgat 420taatgacgac ccgaatccgt attttttcta
taaaaaatag aagaattggt gtgaatcgat 480tctacattga agaaagaatc gaatattcat
tgatcaaatc attcactcca tagtctgata 540gatcctttga agaactgatt aatcggacga
gaataaagat agagtcccgt tctacatgtc 600aataccggca acaatgaaat ttatagtaag
aggaaaatcc gtcgacttta aaaatcgtga 660gggttcaagt ccctctatcc ccaaaaagac
tatttcactc cccaaccccg accccctttc 720cttagcggtt ccaaattcct tatctttctc
attcactcta ttcttttaga aatggatttg 780agcgtaaatg gctttttctt atcacaagtc
ttgtgatata tatgatacac atagaaatga 840acatctttga gcaaggaatc cctagttgaa
tgattcccga tcaatacaat atcattactc 900atactgaaac ttacaaagtc atctttttga
agatcgaaga aattccccgg ctttgataaa 960attttttaat cgacttttgt ccttttaatt
gacatagact ccagttctct aataaaatga 1020ggatactaca ttgggaatag ccgggatagc
tcagttggta gagcagagga ctgaaaatcc 1080tcgtgtcacc agttcaaatc tggttcctgg
cacatgatta atttgtatgg g 1131121089DNAlycium 12atcggtatct
aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg
aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac 120ttactaagtg
atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat
cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg
aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc
agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga 360atactctatc
aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag 420aattggtgtg
aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt 480cactccatag
tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga 540gtcccgttct
acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa
atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc 660aactccgacc
ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc 720tttatagaaa
tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata 780tgatacacat
agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc 840aatacaatat
cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct
ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc 960agttctctaa
taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga 1020gcagaggact
gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat 1080ttgataggg
1089131155DNAL.
barbarum Linn 13atcggtatct aatgaattca atggttccag tataaataaa agattctatt
gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa caaaaagaaa gggggatatg
gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc ttggtatgga aacttactaa
gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa aaatgggcaa tcctgagcca
aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa ggataggtgc agagactcaa
tggaagctat 300tctaacaaat ggagttaaat gcattggtag aggaatcttt acatcgaaac
ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat acatacgtat tgaatactct
atcaaatgat 420taatgacgac ccgaatccgt attttttcta taaaaaatag aagaattggt
gtgaatcgat 480tctacagaat tggtgtgaat cgattctaca ttgaagaaag aatcgaatat
tcattgatca 540aatcattcac tccatagtct gatagatcct ttgaagaact gattaatcgg
acgagaataa 600agatagagtc ccgttctaca tgtcaatacc ggcaacaatg aaatttatag
taagaggaaa 660atccgtcgac tttaaaaatc gtgagggttc aagtccctct atccccaaaa
agactatttc 720actccccaac cccgaccccc tttccttagc ggttccaaat tccttatctt
tctcattcac 780tctattcttt tagaaatgga tttgagcgta aatggctttt tcttatcaca
agtcttgtga 840tatatatgat acacatagaa atgaacatct ttgagcaagg aatccctagt
tgaatgattc 900ccgatcaata caatatcatt actcatactg aaacttacaa agtcatcttt
ttgaagatcg 960aagaaattcc ccggctttga taaaattttt taatcgactt ttgtcctttt
aattgacata 1020gaccccagtt ctctaataaa atgaggatac tacattggga atagccggga
tagctcagtt 1080ggtagagcag aggactgaaa atcctcgtgt caccagttca aatctggttc
ctggcacatg 1140attaatttgt atggg
1155141155DNAlycium 14atcggtatct aatgaattca atggttccag
tataaataaa agattctatt gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa
caaaaagaaa gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc
ttggtatgga aacttactaa gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa
aaatgggcaa tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa
ggataggtgc agagactcaa tggaagctat 300tctaacaaat ggagttaaat gcattggtag
aggaatcttt acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat
acatacgtat tgaatactct atcaaatgat 420taatgacgac ccgaatccgt attttttcta
taaaaaatag aagaattggt gtgaatcgat 480tctacagaat tggtgtgaat cgattctaca
ttgaagaaag aatcgaatat tcattgatca 540aatcattcac tccatagtct gatagatcct
ttgaagaact gattaatcgg acgagaataa 600agatagagtc ccgttctaca tgtcaatacc
ggcaacaatg aaatttatag taagaggaaa 660atccgtcgac tttaaaaatc gtgagggttc
aagtccctct atccccaaaa agactatttc 720actccccaac cccgaccccc tttccttagc
ggttccaaat tccttatctt tctcattcac 780tctattcttt tagaaatgga tttgagcgta
aatggctttt tcttatcaca agtcttgtga 840tatatatgat acacatagaa atgaacatct
ttgagcaagg aatccctagt tgaatgattc 900ccgatcaata caatatcatt actcatactg
aaacttacaa agtcatcttt ttgaagatcg 960aagaaattcc ccggctttga taaaattttt
taatcgactt ttgtcctttt aattgacata 1020gaccccagtt ctctaataaa atgaggatac
tacattggga atagccggga tagctcagtt 1080ggtagagcag aggactgaaa atcctcgtgt
caccagttca aatctggttc ctggcacatg 1140attaatttgt atggg
1155151155DNAlycium 15atcggtatct
aatgaattca atggttccag tataaataaa agattctatt gaaaaaggaa 60tgacatcaca
acgagatcct aatctcaaaa caaaaagaaa gggggatatg gcgaaatcgg 120tagacgctac
ggacttaatt ggattgagcc ttggtatgga aacttactaa gtgatcactt 180tcaaattcag
agaaaccctg gaattaacaa aaatgggcaa tcctgagcca aatcctgttt 240tctgaaaaca
aacaaaggtt cagaaaaaaa ggataggtgc agagactcaa tggaagctat 300tctaacaaat
ggagttaaat gcattggtag aggaatcttt acatcgaaac ttcagaaaga 360aaaagaatga
agtgaaggat aaacgtatat acatacgtat tgaatactct atcaaatgat 420taatgacgac
ccgaatccgt attttttcta taaaaaatag aagaattggt gtgaatcgat 480tctacagaat
tggtgtgaat cgattctaca ttgaagaaag aatcgaatat tcattgatca 540aatcattcac
tccatagtct gatagatcct ttgaagaact gattaatcgg acgagaataa 600agatagagtc
ccgttctaca tgtcaatacc ggcaacaatg aaatttatag taagaggaaa 660atccgtcgac
tttaaaaatc gtgagggttc aagtccctct atccccaaaa agactatttc 720actccccaac
cccgaccccc tttccttagc ggttccaaat tccttatctt tctcattcac 780tctattcttt
tagaaatgga tttgagcgta aatggctttt tcttatcaca agtcttgtga 840tatatatgat
acacatagaa atgaacatct ttgagcaagg aatccctagt tgaatgattc 900ccgatcaata
caatatcatt actcatactg aaacttacaa agtcatcttt ttgaagatcg 960aagaaattcc
ccggctttga taaaattttt taatcgactt ttgtcctttt aattgacata 1020gaccccagtt
ctctaataaa atgaggatac tacattggga atagccggga tagctcagtt 1080ggtagagcag
aggactgaaa atcctcgtgt caccagttca aatctggttc ctggcacatg 1140attaatttgt
atggg
1155161155DNAlycium 16atcggtatct aatgaattca atggttccag tataaataaa
agattctatt gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa caaaaagaaa
gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc ttggtatgga
aacttactaa gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa aaatgggcaa
tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa ggataggtgc
agagactcaa tggaagctat 300tctaacaaat ggagttaaat gcattggtag aggaatcttt
acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat acatacgtat
tgaatactct atcaaatgat 420taatgacgac ccgaatccgt attttttcta taaaaaatag
aagaattggt gtgaatcgat 480tctacagaat tggtgtgaat cgattctaca ttgaagaaag
aatcgaatat tcattgatca 540aatcattcac tccatagtct gatagatcct ttgaagaact
gattaatcgg acgagaataa 600agatagagtc ccgttctaca tgtcaatacc ggcaacaatg
aaatttatag taagaggaaa 660atccgtcgac tttaaaaatc gtgagggttc aagtccctct
atccccaaaa agactatttc 720actccccaac cccgaccccc tttccttagc ggttccaaat
tccttatctt tctcattcac 780tctattcttt tagaaatgga tttgagcgta aatggctttt
tcttatcaca agtcttgtga 840tatatatgat acacatagaa atgaacatct ttgagcaagg
aatccctagt tgaatgattc 900ccgatcaata caatatcatt actcatactg aaacttacaa
agtcatcttt ttgaagatcg 960aagaaattcc ccggctttga taaaattttt taatcgactt
ttgtcctttt aattgacata 1020gaccccagtt ctctaataaa atgaggatac tacattggga
atagccggga tagctcagtt 1080ggtagagcag aggactgaaa atcctcgtgt caccagttca
aatctggttc ctggcacatg 1140attaatttgt atggg
1155171155DNAlycium 17atcggtatct aatgaattca
atggttccag tataaataaa agattctatt gaaaaaggaa 60tgacatcaca acgagatcct
aatctcaaaa caaaaagaaa gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt
ggattgagcc ttggtatgga aacttactaa gtgatcactt 180tcaaattcag agaaaccctg
gaattaacaa aaatgggcaa tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt
cagaaaaaaa ggataggtgc agagactcaa tggaagctat 300tctaacaaat ggagttaaat
gcattggtag aggaatcttt acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat
aaacgtatat acatacgtat tgaatactct atcaaatgat 420taatgacgac ccgaatccgt
attttttcta taaaaaatag aagaattggt gtgaatcgat 480tctacagaat tggtgtgaat
cgattctaca ttgaagaaag aatcgaatat tcattgatca 540aatcattcac tccatagtct
gatagatcct ttgaagaact gattaatcgg acgagaataa 600agatagagtc ccgttctaca
tgtcaatacc ggcaacaatg aaatttatag taagaggaaa 660atccgtcgac tttaaaaatc
gtgagggttc aagtccctct atccccaaaa agactatttc 720actccccaac cccgaccccc
tttccttagc ggttccaaat tccttatctt tctcattcac 780tctattcttt tagaaatgga
tttgagcgta aatggctttt tcttatcaca agtcttgtga 840tatatatgat acacatagaa
atgaacatct ttgagcaagg aatccctagt tgaatgattc 900ccgatcaata caatatcatt
actcatactg aaacttacaa agtcatcttt ttgaagatcg 960aagaaattcc ccggctttga
taaaattttt taatcgactt ttgtcctttt aattgacata 1020gaccccagtt ctctaataaa
atgaggatac tacattggga atagccggga tagctcagtt 1080ggtagagcag aggactgaaa
atcctcgtgt caccagttca aatctggttc ctggcacatg 1140attaatttgt atggg
1155181155DNAlycium
18atcggtatct aatgaattca atggttccag tataaataaa agattctatt gaaaaaggaa
60tgacatcaca acgagatcct aatctcaaaa caaaaagaaa gggggatatg gcgaaatcgg
120tagacgctac ggacttaatt ggattgagcc ttggtatgga aacttactaa gtgatcactt
180tcaaattcag agaaaccctg gaattaacaa aaatgggcaa tcctgagcca aatcctgttt
240tctgaaaaca aacaaaggtt cagaaaaaaa ggataggtgc agagactcaa tggaagctat
300tctaacaaat ggagttaaat gcattggtag aggaatcttt acatcgaaac ttcagaaaga
360aaaagaatga agtgaaggat aaacgtatat acatacgtat tgaatactct atcaaatgat
420taatgacgac ccgaatccgt attttttcta taaaaaatag aagaattggt gtgaatcgat
480tctacagaat tggtgtgaat cgattctaca ttgaagaaag aatcgaatat tcattgatca
540aatcattcac tccatagtct gatagatcct ttgaagaact gattaatcgg acgagaataa
600agatagagtc ccgttctaca tgtcaatacc ggcaacaatg aaatttatag taagaggaaa
660atccgtcgac tttaaaaatc gtgagggttc aagtccctct atccccaaaa agactatttc
720actccccaac cccgaccccc tttccttagc ggttccaaat tccttatctt tctcattcac
780tctattcttt tagaaatgga tttgagcgta aatggctttt tcttatcaca agtcttgtga
840tatatatgat acacatagaa atgaacatct ttgagcaagg aatccctagt tgaatgattc
900ccgatcaata caatatcatt actcatactg aaacttacaa agtcatcttt ttgaagatcg
960aagaaattcc ccggctttga taaaattttt taatcgactt ttgtcctttt aattgacata
1020gaccccagtt ctctaataaa atgaggatac tacattggga atagccggga tagctcagtt
1080ggtagagcag aggactgaaa atcctcgtgt caccagttca aatctggttc ctggcacatg
1140attaatttgt atggg
1155191155DNAlycium 19atcggtatct aatgaattca atggttccag tataaataaa
agattctatt gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa caaaaagaaa
gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc ttggtatgga
aacttactaa gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa aaatgggcaa
tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa ggataggtgc
agagactcaa tggaagctat 300tctaacaaat ggagttaaat gcattggtag aggaatcttt
acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat acatacgtat
tgaatactct atcaaatgat 420taatgacgac ccgaatccgt attttttcta taaaaaatag
aagaattggt gtgaatcgat 480tctacagaat tggtgtgaat cgattctaca ttgaagaaag
aatcgaatat tcattgatca 540aatcattcac tccatagtct gatagatcct ttgaagaact
gattaatcgg acgagaataa 600agatagagtc ccgttctaca tgtcaatacc ggcaacaatg
aaatttatag taagaggaaa 660atccgtcgac tttaaaaatc gtgagggttc aagtccctct
atccccaaaa agactatttc 720actccccaac cccgaccccc tttccttagc ggttccaaat
tccttatctt tctcattcac 780tctattcttt tagaaatgga tttgagcgta aatggctttt
tcttatcaca agtcttgtga 840tatatatgat acacatagaa atgaacatct ttgagcaagg
aatccctagt tgaatgattc 900ccgatcaata caatatcatt actcatactg aaacttacaa
agtcatcttt ttgaagatcg 960aagaaattcc ccggctttga taaaattttt taatcgactt
ttgtcctttt aattgacata 1020gaccccagtt ctctaataaa atgaggatac tacattggga
atagccggga tagctcagtt 1080ggtagagcag aggactgaaa atcctcgtgt caccagttca
aatctggttc ctggcacatg 1140attaatttgt atggg
1155201089DNALycium chinense MilL. var. potaninii
(Pojark.) A. M. Lu 20atcggtatct aatgaattca atggttccag tataaatgaa
agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga cttaattgga
ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga aaccctggaa
ttaacaaaaa tgggcaatcc 180tgagccaaat cccgttttct gaaaacaaac aaaggttcaa
aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga gttaaatgcg
ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa
cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg aatccgtatt
ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga aagaatcgaa
tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga actgattaat
cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca atgaaattta
tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca
aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca aattacttat
ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc tttttcttat
cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc aaggaatccc
tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt acaaagtcat
ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg acttttgtcc
ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt gggaatagcc
gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg
gttcctggca catgattaat 1080ttgtatggg
1089211073DNAlycium 21atcggtatct aatgaattca
atggttccag tataaatgaa agaaaaagga agggggatat 60ggcgaaatcg gtagacgcta
cggacttaat tggattgagc cttggtatgg aaacttacta 120agtgatcact ttcaaattca
gagaaaccct ggaattaaca aaaatgggca atcctgagcc 180aaatcctgtt ttctgaaaac
aaacaaaggt tcagaaaaaa aggataggtg cagagactca 240atggaagcta ttctaacaaa
tggagttaaa tgcgttggta gaggaatctt tacatcgaaa 300cttcagaaag aaaaagaatg
aagtgaagga taaacgtata tacatacgta ttgaatactc 360tatcaaatga ttaatgacga
cccgaatccg tattttttct ataaaaaata gaagaattgg 420tgtgaatcga ttctacattg
aagaaagaat cgaatattca ttgatcaaat cattcactcc 480atagtctgat agatcttttg
aagaactgat taatcggacg agaataaaga tagagtcccg 540ttctacatgt caataccggc
aacaatgaaa tttatagtaa gaggaaaatc cgtcgacttt 600aaaaatcgtg agggttcaag
tccctctatc cccaaaaaga ctatttcact ccccaacttt 660ccttagcggt tccaaattac
ttatctttct cattcactct attctttata gaaatggatt 720tgagcgtaaa tggctttttc
ttatcacaag tcttgtgata tatatgatac acatagaaat 780gaacatcttt gagcaaggaa
tccctagttg aatgattccc gatcaataca atatcattac 840tcatactgaa acttacaaag
tcatcttttt gaagatcgaa gaaattcccc ggctttgata 900aaatttttta atcgactttt
gtccttttaa ttgacataga ccccagttct ctaataaaat 960gaggatacta cattgggaat
agccgggata gctcagttgg tagagcagag gactgaaaat 1020cctcgtgtca ccagttcaaa
tctggttcct ggcacatgat taatttgtat ggg 1073221089DNAlycium
22atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg
60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac
120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc
180tgagccaaat cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga
240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca
300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga
360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag
420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt
480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga
540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc
600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc
660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc
720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata
780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc
840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa
900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc
960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga
1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat
1080ttgtatggg
1089231089DNAlycium 23atcggtatct aatgaattca atggttccag tataaatgaa
agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga cttaattgga
ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga aaccctggaa
ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac aaaggttcag
aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga gttaaatgcg
ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa
cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg aatccgtatt
ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga aagaatcgaa
tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga actgattaat
cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca atgaaattta
tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca
aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca aattacttat
ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc tttttcttat
cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc aaggaatccc
tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt acaaagtcat
ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg acttttgtcc
ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt gggaatagcc
gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg
gttcctggca catgattaat 1080ttgtatggg
1089241089DNADamaye (L. barbarum Linn) 24atcggtatct
aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg
aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac 120ttactaagtg
atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat
cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg
aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc
agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga 360atactctatc
aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag 420aattggtgtg
aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt 480cactccatag
tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga 540gtcccgttct
acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa
atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc 660aactccgacc
ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc 720tttatagaaa
tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata 780tgatacacat
agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc 840aatacaatat
cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct
ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc 960agttctctaa
taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga 1020gcagaggact
gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
1089251089DNABaihua(L. barbarum) 25atcggtatct aatgaattca atggttccag
tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga
cttaattgga ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga
aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac
aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga
gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt
gaaggataaa cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg
aatccgtatt ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga
aagaatcgaa tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga
actgattaat cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca
atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc
tctatcccca aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca
aattacttat ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc
tttttcttat cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc
aaggaatccc tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt
acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg
acttttgtcc ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt
gggaatagcc gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag
ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
1089261128DNAL. chinenseMill. var.
26atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaatga
60catcacaacg agatcctaat ctcaaaacaa aaagaaaggg ggatatggcg aaatcggtag
120acgctacgga cttaattgga ttgagccttg gtatggaaac ttactaagtg atcactttca
180aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc tgagccaaat cctgttttct
240gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga gactcaatgg aagctattct
300aacaaatgga gttaaatgcg ttggtagagg aatctttaca tcgaaacttc agaaagaaaa
360agaatgaagt gaaggataaa cgtatataca tacgtattga atactctatc aaatgattaa
420tgacgacccg aatccgtatt ttttctataa aaaatagaag aattggtgtg aatcgattct
480acattgaaga aagaatcgaa tattcattga tcaaatcatt cactccatag tctgatagat
540cttttgaaga actgattaat cggacgagaa taaagataga gtcccgttct acatgtcaat
600accggcaaca atgaaattta tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg
660ttcaagtccc tctatcccca aaaagactat ttcactcccc aactccgacc ccctttcctt
720agcggttcca aattacttat ctttctcatt cactctattc ttttagaaat ggatttgagc
780gtaaatggct ttttcttatc acaagtcttg tgatatatat gatacacata gaaatgaaca
840tctttgagca aggaatccct agttgaatga ttcccgatca atacaatatc attactcata
900ctgaaactta caaagtcatc tttttgaaga tcgaagaaat tccccggctt tgataaaatt
960ttttaatcga cttttgtcct tttaattgac atagacccca gttctctaat aaaatgagga
1020tactacattg ggaatagccg ggatagctca gttggtagag cagaggactg aaaatcctcg
1080tgtcaccagt tcaaatctgg ttcctggcac atgattaatt tgtatggg
1128271128DNALycium yunnanense Kuang et A.M.Lu 27atcggtatct aatgaattca
atggttccag tataaatgaa agaaaaagaa aaaggaatga 60catcacaacg agatcctaat
ctcaaaacaa aaagaaaggg ggatatggcg aaatcggtag 120acgctacgga cttaattgga
ttgagccttg gtatggaaac ttactaagtg atcactttca 180aattcagaga aaccctggaa
ttaacaaaaa tgggcaatcc tgagccaaat cctgttttct 240gaaaacaaac aaaggttcag
aaaaaaagga taggtgcaga gactcaatgg aagctattct 300aacaaatgga gttaaatgcg
ttggtagagg aatctttaca tcgaaacttc agaaagaaaa 360agaatgaagt gaaggataaa
cgtatataca tacgtattga atactctatc aaatgattaa 420tgacgacccg aatccgtatt
ttttctataa aaaatagaag aattggtgtg aatcgattct 480acattgaaga aagaatcgaa
tattcattga tcaaatcatt cactccatag tctgatagat 540cttttgaaga actgattaat
cggacgagaa taaagataga gtcccgttct acatgtcaat 600accggcaaca atgaaattta
tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg 660ttcaagtccc tctatcccca
aaaagactat ttcactcccc aactccgacc ccctttcctt 720agcggttcca aattacttat
ctttctcatt cactctattc ttttagaaat ggatttgagc 780gtaaatggct ttttcttatc
acaagtcttg tgatatatat gatacacata gaaatgaaca 840tctttgagca aggaatccct
agttgaatga ttcccgatca atacaatatc attactcata 900ctgaaactta caaagtcatc
tttttgaaga tcgaagaaat tccccggctt tgataaaatt 960ttttaatcga cttttgtcct
tttaattgac atagacccca gttctctaat aaaatgagga 1020tactacattg ggaatagccg
ggatagctca gttggtagag cagaggactg aaaatcctcg 1080tgtcaccagt tcaaatctgg
ttcctggcac atgattaatt tgtatggg 1128281089DNAManshenggouqi
(L.bararum) 28atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa
aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg
gtatggaaac 120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa
tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaat aaaggttcag aaaaaaagga
taggtgcaga 240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg
aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca
tacgtattga 360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa
aaaatagaag 420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga
tcaaatcatt 480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa
taaagataga 540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg
aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat
ttcactcccc 660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt
cactctattc 720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt
gtgatatata 780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg
attcccgatc 840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag
atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga
catagacccc 960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc
agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gtttctggca
catgattaat 1080ttgtatggg
1089291089DNAZiguogouqi (L.barbarum) 29atcggtatct aatgaattca
atggttccag tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag
acgctacgga cttaattgga ttgagccttg gtatggaaac 120ttactaagtg atcactttca
aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct
gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg aagctattct
aacaaatgga gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa
agaatgaagt gaaggataaa cgtatataca tacgtattga 360atactctatc aaatgattaa
tgacgacccg aatccgtatt ttttctataa aaaatagaag 420aattggtgtg aatcgattct
acattgaaga aagaatcgaa tattcattga tcaaatcatt 480cactccatag tctgatagat
cttttgaaga actgattaat cggacgagaa taaagataga 540gtcccgttct acatgtcaat
accggcaaca atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg
ttcaagtccc tctatcccca aaaagactat ttcactcccc 660aactccgacc ccctttcctt
agcggttcca aattacttat ctttctcatt cactctattc 720tttatagaaa tggatttgag
cgtaaatggc tttttcttat cacaagtctt gtgatatata 780tgatacacat agaaatgaac
atctttgagc aaggaatccc tagttgaatg attcccgatc 840aatacaatat cattactcat
actgaaactt acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat
tttttaatcg acttttgtcc ttttaattga catagacccc 960agttctctaa taaaatgagg
atactacatt gggaatagcc gggatagctc agttggtaga 1020gcagaggact gaaaatcctc
gtgtcaccag ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
1089301089DNALycium
dasystemum 30atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa
aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg
gtatggaaac 120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa
tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac aaaggttcag aaaaaaagga
taggtgcaga 240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg
aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca
tacgtattga 360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa
aaaatagaag 420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga
tcaaatcatt 480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa
taaagataga 540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg
aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat
ttcactcccc 660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt
cactctattc 720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt
gtgatatata 780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg
attcccgatc 840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag
atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga
catagacccc 960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc
agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca
catgattaat 1080ttgtatggg
1089311089DNAlycium 31atcggtatct aatgaattca atggttccag
tataaatgaa agaaaaagaa aaaggaaggg 60ggatatggcg aaatcggtag acgctacgga
cttaattgga ttgagccttg gtatggaaac 120ttactaagtg atcactttca aattcagaga
aaccctggaa ttaacaaaaa tgggcaatcc 180tgagccaaat cctgttttct gaaaacaaac
aaaggttcag aaaaaaagga taggtgcaga 240gactcaatgg aagctattct aacaaatgga
gttaaatgcg ttggtagagg aatctttaca 300tcgaaacttc agaaagaaaa agaatgaagt
gaaggataaa cgtatataca tacgtattga 360atactctatc aaatgattaa tgacgacccg
aatccgtatt ttttctataa aaaatagaag 420aattggtgtg aatcgattct acattgaaga
aagaatcgaa tattcattga tcaaatcatt 480cactccatag tctgatagat cttttgaaga
actgattaat cggacgagaa taaagataga 540gtcccgttct acatgtcaat accggcaaca
atgaaattta tagtaagagg aaaatccgtc 600gactttaaaa atcgtgaggg ttcaagtccc
tctatcccca aaaagactat ttcactcccc 660aactccgacc ccctttcctt agcggttcca
aattacttat ctttctcatt cactctattc 720tttatagaaa tggatttgag cgtaaatggc
tttttcttat cacaagtctt gtgatatata 780tgatacacat agaaatgaac atctttgagc
aaggaatccc tagttgaatg attcccgatc 840aatacaatat cattactcat actgaaactt
acaaagtcat ctttttgaag atcgaagaaa 900ttccccggct ttgataaaat tttttaatcg
acttttgtcc ttttaattga catagacccc 960agttctctaa taaaatgagg atactacatt
gggaatagcc gggatagctc agttggtaga 1020gcagaggact gaaaatcctc gtgtcaccag
ttcaaatctg gttcctggca catgattaat 1080ttgtatggg
1089321089DNAXiaomaye (L. barbarum Linn)
32atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg
60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac
120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc
180tgagccaaat cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga
240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca
300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga
360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag
420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt
480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa taaagataga
540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc
600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc
660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc
720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata
780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc
840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa
900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc
960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga
1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat
1080ttgtatggg
1089331131DNAlycium 33atcggtatct aatgaattca atggttccag tataaataaa
agattctatt gaaaaaggaa 60tgacatcaca acgagatcct aatctcaaaa caaaaagaaa
gggggatatg gcgaaatcgg 120tagacgctac ggacttaatt ggattgagcc ttggtatgga
aacttactaa gtgatcactt 180tcaaattcag agaaaccctg gaattaacaa aaatgggcaa
tcctgagcca aatcctgttt 240tctgaaaaca aacaaaggtt cagaaaaaaa ggataggtgc
agagactcaa tggaagctat 300tctaacaaat ggagttaaat gcattggtag aggaatcttt
acatcgaaac ttcagaaaga 360aaaagaatga agtgaaggat aaacgtatat acatacgtat
tgaatactct atcaaatgat 420taatgacgac ccgaatccgt attttttcta taaaaaatag
aagaattggt gtgaatcgat 480tctacattga agaaagaatc gaatattcat tgatcaaatc
attcactcca tagtctgata 540gatcctttga agaactgatt aatcggacga gaataaagat
agagtcccgt tctacatgtc 600aataccggca acaatgaaat ttatagtaag aggaaaatcc
gtcgacttta aaaatcgtga 660gggttcaagt ccctctatcc ccaaaaagac tatttcactc
cccaaccccg accccctttc 720cttagcggtt ccaaattcct tatctttctc attcactcta
ttcttttaga aatggatttg 780agcgtaaatg gctttttctt atcacaagtc ttgtgatata
tatgatacac atagaaatga 840acatctttga gcaaggaatc cctagttgaa tgattcccga
tcaatacaat atcattactc 900atactgaaac ttacaaagtc atctttttga agatcgaaga
aattccccgg ctttgataaa 960attttttaat cgacttttgt ccttttaatt gacatagacc
ccagttctct aataaaatga 1020ggatactaca ttgggaatag ccgggatagc tcagttggta
gagcagagga ctgaaaatcc 1080tcgtgtcacc agttcaaatc tggttcctgg cacatgatta
atttgtatgg g 1131341089DNALycium dasystemum Pojark
34atcggtatct aatgaattca atggttccag tataaatgaa agaaaaagaa aaaggaaggg
60ggatatggcg aaatcggtag acgctacgga cttaattgga ttgagccttg gtatggaaac
120ttactaagtg atcactttca aattcagaga aaccctggaa ttaacaaaaa tgggcaatcc
180tgagccaaat cctgttttct gaaaacaaac aaaggttcag aaaaaaagga taggtgcaga
240gactcaatgg aagctattct aacaaatgga gttaaatgcg ttggtagagg aatctttaca
300tcgaaacttc agaaagaaaa agaatgaagt gaaggataaa cgtatataca tacgtattga
360atactctatc aaatgattaa tgacgacccg aatccgtatt ttttctataa aaaatagaag
420aattggtgtg aatcgattct acattgaaga aagaatcgaa tattcattga tcaaatcatt
480cactccatag tctgatagat cttttgaaga actgattaat cggacgagaa taaagatgga
540gtcccgttct acatgtcaat accggcaaca atgaaattta tagtaagagg aaaatccgtc
600gactttaaaa atcgtgaggg ttcaagtccc tctatcccca aaaagactat ttcactcccc
660aactccgacc ccctttcctt agcggttcca aattacttat ctttctcatt cactctattc
720tttatagaaa tggatttgag cgtaaatggc tttttcttat cacaagtctt gtgatatata
780tgatacacat agaaatgaac atctttgagc aaggaatccc tagttgaatg attcccgatc
840aatacaatat cattactcat actgaaactt acaaagtcat ctttttgaag atcgaagaaa
900ttccccggct ttgataaaat tttttaatcg acttttgtcc ttttaattga catagacccc
960agttctctaa taaaatgagg atactacatt gggaatagcc gggatagctc agttggtaga
1020gcagaggact gaaaatcctc gtgtcaccag ttcaaatctg gttcctggca catgattaat
1080ttgtatggg
10893523DNAArtificial SequenceThe sequence is synthesized. 35atcggtatct
aatgaattca atg
233623DNAArtificial SequenceThe sequence is synthesized. 36cccatacaaa
ttaatcatgt gcc 23
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