Patent application title: MALARIA VACCINE
Inventors:
IPC8 Class: AA61K39015FI
USPC Class:
1 1
Class name:
Publication date: 2019-11-21
Patent application number: 20190351041
Abstract:
The present invention provides a particle comprising a polypeptide and at
least one malaria antigen, and a composition or vaccine comprising
thereof, its use in medicine, particularly in the prevention or treatment
of malaria infections.Claims:
1-44. (canceled)
45. A virus-like particle comprising a virus structural polypeptide and at least one malaria antigen, wherein said virus structural polypeptide is a polypeptide derived from alphavirus.
46. The virus-like particle according to claim 45, wherein said virus structural polypeptide comprises the capsid and/or the envelope proteins E1 and E2.
47. The virus-like particle according to claim 46, wherein said at least one malaria antigen is inserted into E2 of the envelope protein.
48. The virus-like particle according to claim 45, wherein said virus structural polypeptide is a polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV).
49. The virus-like particle according to claim 45, wherein said at least one malaria antigen is a fragment derived from the circumsporozoite protein.
50. The virus-like particle according to claim 45, wherein said at least one malaria antigen is an antigen comprising (NPNA).sub.n wherein n is from 4 to 30 and/or an antigen comprising (EYLNKIQSLSTEWSPCSVT).sub.y wherein y is from 1 to 6.
51. The virus-like particle according to claim 48, wherein said at least one malaria antigen is inserted between 509-510, 510-511, 511-512, 519-520, 529-530, 530-531 or 531-532 of SEQ ID NO: 1 or 2, or between residues 515-516, 516-517, 517-518, 518-519, 519-520, 536-537, 537-538 or 538-539 of SEQ ID NO: 3.
52. The virus-like particle according to claim 48, wherein the particle is Chikungunya virus-like particle consisting of one or more envelope protein E2 into which the antigen is inserted, one or more envelope protein E1 and one or more capsid, and wherein the envelope protein E2 into which the antigen is inserted consists of an amino acid sequence represented by SEQ ID NO: 50; the envelope protein E1 consists of an amino acid sequence represented by SEQ ID NO: 51; and the capsid consists of an amino acid sequence represented by SEQ ID NO: 52.
53. The virus-like particle according to claim 48, wherein the particle is Venezuelan equine encephalitis virus-like particle consisting of one or more envelope protein E2 into which the antigen is inserted, one or more envelope protein E1 and one or more capsid, and wherein the envelope protein E2 into which the antigen is inserted consists of an amino acid sequence represented by SEQ ID NO: 53; the envelope protein E1 consists of an amino acid sequence represented by SEQ ID NO: 54; and the capsid consists of an amino acid sequence represented by SEQ ID NO: 55.
54. An isolated nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45.
55. A vector comprising the nucleic acid molecule according to claim 54, wherein the vector optionally comprises an expression control sequence operably linked to the nucleic acid molecule.
56. A pharmaceutical composition comprising: (a) the virus-like particle according to claim 45 and/or a nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45; and (b) a pharmaceutically acceptable carrier.
57. A vaccine composition comprising the virus-like particle according to claim 45.
58. A method of treating malaria in a mammal, comprising administering an effective amount of the virus-like particle according to claim 45 and/or a nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45 to the mammal in need thereof.
59. A method of treating malaria in a mammal, comprising administering a priming composition comprising at least one first malaria antigen or at least one polynucleotide encoding at least one first malaria antigen; and a boosting composition comprising at least one polypeptide comprising at least one second malaria antigen or at least one polynucleotide encoding at least one second malaria antigen, wherein at least one of said compositions comprises the virus-like particle according to claim 45 and/or a nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45 to the mammal in need thereof.
60. The method according to claim 59, wherein the polynucleotide encodes substantially all of the circumsporozoite protein.
61. The vaccine composition according to claim 57 for use in the prevention or treatment of malaria, comprising a plurality of malaria-derived antigens.
62. A kit comprising (a) a vaccine composition comprising the virus-like particle according to claim 45; and (b) another vaccine composition comprising the virus-like particle according to claim 45, wherein the particle contained in (a) is a virus-like particle which is different from the particle contained in (b).
63. The kit according to claim 62, further comprising (c) a third vaccine composition comprising a virus-like comprising a virus structural polypeptide and at least one malaria antigen, wherein said virus structural polypeptide is a polypeptide derived from alphavirus or flavivirus, wherein said first vaccine composition is used for priming immunization and said second and third vaccine compositions are used for boosting immunization, and wherein the virus-like particle contained in said third vaccine composition is different from the virus-like particle contained in said first and second vaccine compositions, or is the same as a virus-like particle contained in either said first or second vaccine composition.
64. A DNA vaccine composition comprising the nucleic acid molecule according to claim 54.
Description:
CROSS-REFERENCE TO RELATED APPLICATIONS
[0001] This is a continuation of U.S. application Ser. No. 15/299,859 filed Oct. 21, 2016, which is a continuation of U.S. application Ser. No. 14/294,968 filed Jun. 3, 2014, now U.S. Pat. No. 9,512,190 issued Dec. 6, 2016, which claims benefit from U.S. Provisional Application No. 61/830,436, filed Jun. 3, 2013, and U.S. Provisional Application No. 61/906,583, filed Nov. 20, 2013. The entire disclosures of the prior applications are considered part of the disclosure of the accompanying continuation, and are hereby incorporated by reference.
TECHNICAL FIELD
[0002] The present invention relates to a particle comprising a polypeptide and at least one malaria antigen, and a composition or vaccine comprising thereof, its use in medicine, particularly in the prevention or treatment of malaria.
BACKGROUND
[0003] Malaria is one of the world's most prevalent serious infectious diseases, with approximately 250 million cases and 1 million deaths per year (WHO, 2009). Mortality is primarily in children under the age of five and in pregnant women. Every 45 seconds, an African child dies of malaria. The disease is transmitted from person to person by infected mosquitoes, so past eradication efforts involved massive insecticide campaigns. These were successful in the Southeast U.S. for example, but failed in most poorly developed tropical countries. Current efforts involve distribution of bednets, particularly bednets impregnated with insecticide, to prevent mosquito bites at night. However, resistance to insecticides and to anti-malarial drugs for both prevention and treatment is rapidly rising. Thus, the need for a malaria vaccine is imperative for protection of millions of people from disease (http://www.globalvaccines.org/content/malaria+vaccine+program/19614).
[0004] Malaria caused by Plasmodium falciparum remains a major public health threat, especially among children and pregnant women in Africa. An effective malaria vaccine would be a valuable tool to reduce the disease burden and could contribute to elimination of malaria in some regions of the world. Current malaria vaccine candidates are directed against human and mosquito stages of the parasite life cycle, but thus far, relatively few proteins have been studied for potential vaccine development.
[0005] The most advanced vaccine candidate, RTS,S, conferred partial protection against malaria in phase II clinical trials and is currently being evaluated in a phase III trial in Africa. (The Journal of Clinical Investigation 120(12) 4168-4178, 2010).
[0006] The CSP is the predominant surface antigen on sporozoites. CSP is composed of an N-terminal region that binds heparin sulfate proteoglycans (RI), a central region containing a four-amino-acid (NPNA) repeat, and a GPI-anchored C-terminal region containing a thrombospondin-like domain (RII). The region of the CSP included in the RTS,S vaccine includes the last 16 NPNA repeats and the entire flanking C-terminus. HBsAg particles serve as the matrix carrier for RTS,S, 25% of which is fused to the CSP segment (The Journal of Clinical Investigation 120(12) 4168-4178, 2010).
[0007] In a series of phase II clinical trials for RTS,S, 30%-50% of malaria-naive adults immunized with RTS,S were protected against challenge by mosquitoes infected with the homologous P. falciparum clone. In phase II field trials in the Gambia and Kenya, RTS,S conferred short-lived protection against malaria infection in approximately 35% of adults, although results from the Kenya trial did not reach statistical significance. Approximately 30%-50% of children and infants immunized with RTS,S in phase II trials conducted in Mozambique, Tanzania, and Kenya were protected from clinical malaria, however, protection was generally short-lived (The Journal of Clinical Investigation 120(12) 4168-4178, 2010). Results from a pivotal, large-scale Phase III trial, published Nov. 9, 2012, online in the New England Journal of Medicine (NEJM), show that the RTS,S malaria vaccine candidate can help protect African infants against malaria. When compared to immunization with a control vaccine, infants (aged 6-12 weeks at first vaccination) vaccinated with RTS,S had one-third fewer episodes of both clinical and severe malaria and had similar reactions to the injection.
[0008] There are currently no licensed vaccines against malaria. Highly effective malaria vaccine is strongly desired.
[0009] Virus-like particles (VLPs) are multiprotein structures that mimic the organization and conformation of authentic native viruses but lack the viral genome, potentially yielding safer and cheaper vaccine candidates. A handful of prophylactic VLP-based vaccines is currently commercialized worldwide: GlaxoSmithKline's Engerix.RTM. (hepatitis B virus) and Cervarix.RTM. (human papillomavirus), and Merck and Co., Inc.'s Recombivax HB.RTM. (hepatitis B virus) and Gardasil.RTM. (human papillomavirus) are some examples. Other VLP-based vaccine candidates are in clinical trials or undergoing preclinical evaluation, such as, influenza virus, parvovirus, Norwalk and various chimeric VLPs. Many others are still restricted to small-scale fundamental research, despite their success in preclinical tests. The implications of large-scale VLP production are discussed in the context of process control, monitorization and optimization. The main up- and down-stream technical challenges are identified and discussed accordingly. Successful VLP-based vaccine blockbusters are briefly presented concomitantly with the latest results from clinical trials and the recent developments in chimeric VLP-based technology for either therapeutic or prophylactic vaccination (Expert Rev. Vaccines 9(10), 1149-1176, 2010).
[0010] Chikungunya virus (CHIKV) has infected millions of people in Africa, Europe and Asia since this alphavirus reemerged from Kenya in 2004. The severity of the disease and the spread of this epidemic virus present a serious public health threat in the absence of vaccines or antiviral therapies. It is reported that a VLP vaccine for epidemic Chikungunya virus protects non-human primates against infection (Nat Med. 2010 March; 16(3): 334-338). US patent publication No. 2012/0003266 discloses a virus-like particle (VLP) comprising one or more Chikungunya virus structural polypeptides which is useful for formulating a vaccine or antigenic composition for Chikungunya that induces immunity to an infection or at least one symptom thereof. WO2012/106356 discloses modified alphavirus or flavivirus virus-like particles (VLPs) and methods for enhancing production of modified VLPs for use in the prevention or treatment of alphavirus and flavivirus-mediated diseases. (these cited references are herein incorporated by reference).
SUMMARY OF THE INVENTION
[0011] In the first aspect, the present invention provides a particle which is capable of being self-assembled, comprising a polypeptide and at least one malaria antigen, wherein said polypeptide comprises at least one first attachment site and said at least one malaria antigen comprises at least one second attachment site, and wherein said polypeptide and said malaria antigen are linked through said at least one first and said at least one second attachment site.
[0012] In the second aspect, the present invention provides a nucleic acid molecule which is designed for expression of a particle provided in the first aspect of the present invention.
[0013] In the third aspect, the present invention provides a composition or vaccine comprising the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention.
[0014] In the fourth aspect, the present invention provides a method of producing an antibody, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0015] In the fifth aspect, the present invention provides a method of immunomodulation, a method of treating malaria, a method of inducing and/or enhancing immune response against a malaria antigen in a mammal, comprising administering the composition provided in the third aspect of the present invention to a mammal.
[0016] In sixth aspect, the present invention provides a method of passive immunization against a malaria-causing pathogen, comprising administering the antibody provided in the fourth aspect of the present invention to a mammal.
[0017] In seventh aspect, the present invention provides a method of presenting an antigen on macrophage, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0018] In eighth aspect, the present invention provides a method for producing the particle provided in the first aspect of the present invention, comprising preparing a vector which is designed for expression of said particle; culturing a cell which is transfected with said vector to express said particle; and recovering said particle.
BRIEF DESCRIPTION OF THE INVENTION
[0019] FIG. 1 shows pVLP74_15 (VLP_CHI 532 NPNAx6) vector.
[0020] FIG. 2 shows pVLP78_15 (VLP_CHI 532 NPNAx25) vector.
[0021] FIG. 3 shows pVLP74_25 (VLP_VEEV 519 NPNAx6) vector.
[0022] FIG. 4 shows that the serum from individual monkeys immunized with Malaria VLPs after 2 weeks induced high titer of antibodies against CSP.
[0023] FIG. 5 shows mean value and SD of the data shown in FIG. 4.
[0024] FIG. 6 shows effects of combined immunization of CHIKV VLP and VEEV VLP on induction of antibodies against CSP. In the figure, Adj indicates adjuvant.
[0025] FIG. 7 shows effects of administered VLP fused with no malaria antigen on induction of antibodies against CSP. In the figure, 4 w, 6 w, 10 w and 14 w indicate 4 weeks after immunization, 6 weeks after immunization, 10 weeks after immunization and 14 weeks after immunization, respectively.
[0026] FIG. 8 shows effects of administered VLP fused with malaria antigen on induction of antibodies against CSP. In the figure, 4 w, 6 w, 10 w and 14 w indicate 4 weeks after immunization, 6 weeks after immunization, 10 weeks after immunization and 14 weeks after immunization, respectively.
[0027] FIG. 9 shows effects of administered VLP fused with malaria antigen together with adjuvant on induction of antibodies against CSP. In the figure, 4 w, 6 w, 10 w and 14 w indicate 4 weeks after immunization, 6 weeks after immunization, 10 weeks after immunization and 14 weeks after immunization, respectively.
[0028] FIG. 10 shows schedule of the experiment.
[0029] FIG. 11 shows detection of 18S malaria DNA by means of PCR.
DETAILED DESCRIPTION OF THE INVENTION
(1) A Particle Comprising a Polypeptide and at Least One Malaria Antigen
[0030] In the first aspect, the present invention provides a particle which is capable of being self-assembled, comprising a polypeptide and at least one malaria antigen, wherein said polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said polypeptide and said malaria antigen are linked through said at least one first and said at least one second attachment site.
[0031] As used herein, "a particle which is capable of being self-assembled" refers to a particle formed by at least one constituent which is spontaneously assembled. The constituent may be a polypeptide or non-peptide chemical compound. In one embodiment, "a particle which is capable of being self-assembled" may be a particle comprising or consisting of at least one polypeptide. The at least one polypeptide consists of one or more kinds of peptide. In one embodiment, said particle has a diameter of at least 10 nm, for example, at least 20 nm, preferably at least 50 nm. In one embodiment, molecular weight of said particle is from 100 kDa to 100,000 kDa, preferably from 400 kDa to 30,000 kDa.
[0032] A polypeptide used for the present invention may be spontaneously assembled. The polypeptide may be a virus structural polypeptide. Thus, the particle provided by the present invention may be a virus like particle.
[0033] A virus structural polypeptide may be a naturally occurring viral polypeptide or modified polypeptide thereof. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring viral structural polypeptide including capsid and envelope protein. In one embodiment, the modified polypeptide is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added to a naturally occurring viral structural polypeptide including capsid and envelope protein.
[0034] In one embodiment, virus structural polypeptide used for the present invention consists of or comprises capsid and/or envelope protein or fragment thereof. For example, virus structural polypeptide used for the present invention consists of or comprises capsid and E2 and E1. An antigen may be inserted into E2. In one embodiment, a particle provided by the first aspect of the present invention can be formed by assembling 240 capsids, 240 E1 proteins and 240 E2 proteins where a malaria antigen is inserted into each of E2 proteins.
[0035] Virus structural polypeptide used for the present invention may be derived from Alphavirus or Flavivirus. Thus, the particle provided by the present invention may be a virus like particle derived from Alphavirus or Flavivirus. Examples of Alphavirus and Flavivirus include, but not limited to, Aura virus, Babanki virus, Barmah Forest virus (BFV), Bebaru virus, Cabassou virus, Chikungunya virus (CHIKV), Eastern equine encephalitis virus (EEEV), Eilat virus, Everglades virus, Fort Morgan virus, Getah virus, Highlands J virus, Kyzylagach virus, Mayaro virus, Me Tri virus, Middelburg virus, Mosso das Pedras virus, Mucambo virus, Ndumu virus, O'nyong-nyong virus, Pixuna virus, Rio Negro virus, Ross River virus (RRV), Salmon pancreas disease virus, Semliki Forest virus, Sindbis virus, Southern elephant seal virus, Tonate virus, Trocara virus, Una virus, Venezuelan equine encephalitis virus (VEEV), Western equine encephalitis virus (WEEV), Whataroa virus, West Nile virus, dengue virus, tick-borne encephalitis virus and yellow fever virus.
[0036] Malaria is a disease which human or other animal (e.g. mouse) suffers from. Example of malaria include, but are not limited to, a disease caused by Plasmodium (P.) species including P. falciparum, P. malariae, P. ovale, P. vivax, P. knowlesi, P. berghei, P. chabaudi and P. yoelii
[0037] As used herein, the term "malaria antigen" refers to any antigen or fragment thereof. The term antigen or fragment thereof, means any peptide-based sequence that can be recognized by the immune system and/or that stimulates a cell-mediated immune response and/or stimulates the generation of antibodies.
[0038] According to Scand. J. Immunol. 56, 327-343, 2002, considering the whole parasite life cycle, there are essentially six targets for a malaria vaccine: (1) sporozoites; (2) liver stages; (3) merozoites; (4) infected RBC; (5) parasite toxins; (6) sexual stages.
[0039] Table summarizes the main candidate antigens of each stage identified.
TABLE-US-00001 TABLE 1 Main vaccine candidates from the different phases of Plasmodium life cycle Targets Candidate antigens Sporozoite Circumsporozoite protein (CSP) Thrombospondin-related adhesive protein (TRAP) Sporozoite and liver-stage antigen (SALSA) Sporozoite threonine- and asparagine-rich protein (STARP) CSP Liver stage Liver-stage antigen (LSA)-1 and -3 SALSA STARP Merozoite Merozoite surface protein (MSP)-1, -2, -3, -4 and -5 Erythrocyte-binding antigen (EBA)-175 Apical membrane antigen (AMA)-1 Rhoptry-associated protein (RAP)-1 and -2 Blood stage Acidic-basic repeat antigen (ABRA) Duffy-binding protein (DBP) (Plasmodium vivax) Ring erythrocyte surface antigen (RESA) Serine-rich protein (SERP) Erythrocyte membrane protein (EMP)-1, -2 and -3 Glutamate-rich protein (GLURP) Toxins Glycosilphosphatidylinositol (GPI) Sexual stages Ps25, Ps28, Ps48/45 and Ps230 (Scand. J. Immunol. 56, 327-343, 2002)
[0040] According to the present invention, one or more antigens listed above can be used as long as it is formed to a particle. For example, a circumsporozoite protein and a fragment thereof can be used as an antigen. Examples of circumsporozoite protein include, but are not limited to, Plasmodium falciparum circumsporozoite protein consisting of amino acid sequence described below (SEQ ID No.56):
TABLE-US-00002 Mmrklailsvssflfvealfqeyqcygsssntrvlnelnydnagtnlyne lemnyygkqenwyslkknsrslgenddgnnnngdngregkdedkrdgnne dneklrkpkhkklkqpgdgnpdpnanpnvdpnanpnvdpnanpnvdpnan pnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpn anpnanpnvdpnanpnanpnanpnanpnanpnanpnanpnanpnanpnan pnanpnanpnanpnanpnanpnanpnanpnanpnanpnknnqgngqghnm pndpnrnvdenanannavknnnneepsdkhieqylkkiknsistewspcs vtcgngiqvrikpgsankpkdeldyendiekkickmekcssvfnvvnssi glimvlsflflntr.
[0041] In one embodiment, malaria antigen is a Plasmodium falciparum circumsporozoite protein B cell epitope. Example of Plasmodium falciparum circumsporozoite protein B cell epitope may be a repeat sequence of NPNA, including (NPNA).sub.4-30 (i.e. 4xNPNA, 5xNPNA, 6xNPNA, 7xNPNA, 8xNPNA, 9xNPNA, 10xNPNA, 11xNPNA, 12xNPNA, 13xNPNA 14xNPNA, 15xNPNA, 16xNPNA, 17xNPNA, 18xNPNA, 19xNPNA, 20xNPNA, 21xNPNA, 22xNPNA, 23xNPNA, 24xNPNA, 25xNPNA, 26xNPNA, 27xNPNA, 28xNPNA, 29xNPNA or 30xNPNA).
[0042] In one embodiment, malaria antigen is a Plasmodium yoelii circumsporozoite protein B cell epitope including (QGPGAP).sub.3-12.
[0043] In one embodiment, malaria antigen is a Plasmodium vivax circumsporozoite protein B cell epitope including (ANGAGNQPG).sub.1-12.
[0044] In one embodiment, malaria antigen is a Plasmodium malariae circumsporozoite protein B cell epitope including (NAAG).sub.4-30.
[0045] In one embodiment, malaria antigen is a Plasmodium falciparum circumsporozoite protein T cell epitope. Example of Plasmodium falciparum circumsporozoite protein T cell epitope may be EYLNKIQNSLSTEWSPCSVT (SEQ ID No.44). (EYLNKIQNSLSTEWSPCSVT).sub.1-6 may be also used as a malaria antigen.
[0046] In one embodiment, malaria antigen is a Plasmodium yoelii circumsporozoite protein T cell epitope which is YNRNIVNRLLGDALNGPEEK (SEQ ID No.45). (YNRNIVNRLLGDALNGPEEK).sub.1-6 may be also used as a malaria antigen.
[0047] The present invention addresses one or more of the above needs by providing antigens, vectors encoding the antigens, and antibodies (and antibody-like molecules including aptamers and peptides) that specifically bind to the antigen, together with the uses thereof (either alone or in combination) in the prevention or treatment of malaria infections. As used herein, the term "antibody" refers to molecules which are capable of binding an epitope or antigenic determinant. The term is meant to include whole antibodies and antigen-binding fragments thereof, including single-chain antibodies. Such antibodies include human antigen binding antibody fragments and include, but are not limited to, Fab, Fab' and F(ab')2, Fd, single-chain Fvs (scFv), single-chain antibodies, disulfide-linked Fvs (sdFv) and fragments comprising either a VL or VH domain. The antibodies can be from any animal origin including birds and mammals. Preferably, the antibodies are mammalian e.g. human, murine, rabbit, goat, guinea pig, camel, horse and the like, or other suitable animals e.g. chicken. As used herein, "human" antibodies include antibodies having the amino acid sequence of a human immunoglobulin and include antibodies isolated from human immunoglobulin libraries or from animals transgenic for one or more human immunoglobulins and that do not express endogenous immunoglobulins, as described, for example, in U.S. Pat. No. 5,939,598, the disclosure of which is incorporated herein by reference in its entirety.
[0048] The antigen used for the present invention can be modified polypeptide derived from a naturally occurring protein. The modified polypeptide may be a fragment of the naturally occurring protein. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a polypeptide derived from a naturally occurring protein. In one embodiment, the modified polypeptide derived is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a polypeptide derived from naturally occurring protein.
[0049] In the particle as provided by the present invention, a polypeptide and an antigen may be linked through at least one first attachment site which is present in the polypeptide and at least one second attachment site which is present in the antigen.
[0050] As used herein, each of "a first attachment site" and "a second attachment site" refers to a site where more than one substance is linked each other.
[0051] In one embodiment, the polypeptide and the antigen are directly fused. Alternatively, one or two linkers may intervene between N-terminal residue of the antigen and the polypeptide and/or between C-terminal residue of the antigen and the polypeptide.
[0052] The antigen or the polypeptide can be truncated and replaced by short linkers. In some embodiments, the antigen or the polypeptide include one or more peptide linkers. Typically, a linker consists of from 2 to 25 amino acids. Usually, it is from 2 to 15 amino acids in length, although in certain circumstances, it can be only one, such as a single glycine residue.
[0053] In one embodiment, a nucleic acid molecule, in which polynucleotide encoding the polypeptide is genetically fused with polynucleotide encoding the antigen, is expressed in a host cell so that the first attachment site and the second attachment site are linked through a peptide bond. In this case, the polypeptide and the antigen are linked through a peptide bond. Relating to this embodiment, the first attachment site and/or the second attachment site may be genetically modified from the original polypeptide or antigen. For example, the first attachment site is modified from the polypeptide so that through a linker peptide including SG, GS, SGG, GGS and SGSG, the polypeptide is conjugated with the antigen.
[0054] When the polypeptide are chemically conjugated with the antigen, the first attachment site and the second attachment site may be linked through a chemical cross-linker which is a chemical compound.
[0055] Examples of the cross-linker include, but are not limited to, SMPH, Sulfo-MBS, Sulfo-EMCS, Sulfo-GMBS, Sulfo-SIAB, Sulfo-SMPB, Sulfo-SMCC, SVSB, SIA and other cross-linkers available from the Pierce Chemical Company.
[0056] In one embodiment, the particle provided by the present invention comprises a polypeptide linked to an antigen, wherein spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 .ANG. or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom.
[0057] The antigen used for the present invention can be designed by a person skilled in the art. For example, the antigen used for the present invention may be a naturally occurring protein or a fragment thereof. Alternatively, the antigen used for the present invention may be a protein modified from a naturally occurring protein or a fragment thereof. A person skilled in the art can design the antigen so that spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 .ANG. or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom. For example, the antigen used for the particle provided by the present invention can be designed using a free software including PyMOL (e.g. PyMOL v0.99: http:/www.pymol.org). In one embodiment, the spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 .ANG. (angstrom) or less, 20 .ANG. or less, or 10 .ANG. or less (e.g. from 5 .ANG. to 15 .ANG., from 5 .ANG. to 12 .ANG., from 5 .ANG. to 11 .ANG., from 5 .ANG. to 10 .ANG., from 5 .ANG. to 8 .ANG., from 8 .ANG. to 15 .ANG., from 8 .ANG. to 13 .ANG., from 8 .ANG. to 12 .ANG., from 8 .ANG. to 11 .ANG., from 9 .ANG. to 12 .ANG., from 9 .ANG. to 11 .ANG., from 9 .ANG. to 10 .ANG. or from 10 .ANG. to 11 .ANG.).
Chikungunya Virus Like Particle or a Venezuelan Equine Encephalitis Virus Like Particle
[0058] In one embodiment, the present invention provides a
[0059] Chikungunya virus like particle or a Venezuelan equine encephalitis virus like particle comprising a Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and at least one malaria antigen, wherein said Chikungunya virus structural polypeptide or said Venezuelan equine encephalitis virus structural polypeptide comprises at least one first attachment site and said at least one malaria antigen comprises at least one second attachment site, and wherein said Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and said at least one antigen are linked through said at least one first and said at least one second attachment site.
[0060] In one embodiment, a spatial distance between the N-terminal residue and C-terminal residue of the malaria antigen may be 30 .ANG. or less; 25 .ANG. or less; 20 .ANG. or less; 15 .ANG. or less; 14 .ANG. or less; 13 .ANG. or less; 12 .ANG. or less; 11 .ANG. or less; 10 .ANG. or less; 9 .ANG. or less; or 8 .ANG. or less (e.g. from 5 .ANG. to 15 .ANG., from 5 .ANG. to 12 .ANG., from 5 .ANG. to 11 .ANG., from 5 .ANG. to 10 .ANG., from 5 .ANG. to 8 .ANG., from 8 .ANG. to 15 .ANG., from 8 .ANG. to 13 .ANG., from 8 .ANG. to 12 .ANG., from 8 .ANG. to 11 .ANG., from 9 .ANG. to 12 .ANG., from 9 .ANG. to 11 .ANG., from 9 .ANG. to 10 .ANG. or from 10 .ANG. to 11 .ANG.) when the distance is determined in a crystal of the malaria antigen or a naturally occurring protein containing the malaria antigen or modified protein therefrom.
[0061] In one embodiment, the malaria antigen is linked to the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide by way of chemical cross-linking or as a fusion protein produced by way of genetic engineering.
[0062] A Chikungunya or Venezuelan equine encephalitis virus structural polypeptide used in the present invention may comprise a Chikungunya or Venezuelan equine encephalitis virus envelope protein and/or a capsid.
[0063] Examples of Chikungunya virus include, but are not limited to, strains of 37997 and LR2006 OPY-1.
[0064] Examples of Venezuelan equine encephalitis virus include, but are not limited to, TC-83.
[0065] Chikungunya or Venezuelan equine encephalitis virus structural polypeptide used in the present invention may naturally occurring virus structural polypeptide or modified polypeptide thereof. The modified polypeptide may be a fragment of the naturally occurring virus structural polypeptide. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring viral capsid and/or envelope protein. In one embodiment, the modified polypeptide is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a naturally occurring viral capsid and/or envelope protein. For example, K64A or K64N mutatation may be introduced into a capsid of Venezuelan equine encephalitis virus structural polypeptide used in the present invention.
[0066] Chikungunya or Venezuelan equine encephalitis virus structural polypeptide may consist of or comprise a capsid, E2 and E1.
[0067] Examples of Chikungunya virus structural polypeptide include, but are not limited to, Capsid-E2-E1 of Chikungunya virus Strain 37997, and Capsid-E2-E1 of Chikungunya virus LR2006 OPY-1.
[0068] Examples of Venezuelan equine encephalitis virus structural polypeptide include, but are not limited to, Capsid-E2-E1 of Venezuelan equine encephalitis virus Strain TC-83.
[0069] An exemplary Chikungunya virus structural polypeptide sequence is provided at Genbank Accession No. ABX40006.1, which is described below (SEQ ID No.1):
TABLE-US-00003 mefiptqtfynrryqprpwtprptiqvirprprpqrqagqlaqlisavnk ltmravpqqkprrnrknkkqkqkqqapqnntnqkkqppkkkpaqkkkkpg rrermcmkiendcifevkhegkvtgyaclvgdkvmkpahvkgtidnadla klafkrsskydlecaqipvhmksdaskfthekpegyynwhhgavqysggr ftiptgagkpgdsgrpifdnkgrvvaivlgganegartalsvvtwnkdiv tkitpegaeewslaipvmcllanttfpcsqppctpccyekepeetlrmle dnvmrpgyyqllqasltcsphrqrrstkdnfnvykatrpylahcpdcgeg hschspvalerirneatdgtlkiqvslqigiktddshdwtklrymdnhmp adaeraglfvrtsapctitgtmghfilarcpkgetltvgftdsrkishsc thpfhhdppvigrekfhsrpqhgkelpcstyvqstaatteeievhmppdt pdrtlmsqqsgnvkitvngqtvrykcncggsnegltttdkvinnckvdqc haavtnhkkwqynsplvprnaelgdrkgkihipfplanvtcrvpkarnpt vtygknqvimllypdhptllsyrnmgeepnyqeewvmhkkevvltvpteg levtwgnnepykywpqlstngtahghpheiilyyyelyptmtvvvvsvat fillsmvgmaagmcmcarrrcitpyeltpgatvpfllsliccirtakaat yqeaaiylwneqqplfwlqaliplaalivlcnclrllpcccktlaflavm svgahtvsayehvtvipntvgvpyktlvnrpgyspmvlemellsvtlept lsldyitceyktvipspyvkccgtaeckdknlpdysckvftgvypfmwgg aycfcdaentqlseahveksescktefasayrahtasasaklrvlyqgnn itvtayangdhavtvkdakfivgpmssawtpfdnkivvykgdvynmdypp fgagrpgqfgdiqsrtpeskdvyantqlvlqrpavgtvhvpysqapsgfk ywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvv dapsltdmscevpacthssdfggvaiikyaaskkgkcavhsmtnavtire aeievegnsqlqisfstalasaefrvqvcstqvhcaaechppkdhivnyp ashttlgvqdisatamswvqkitggvglvvavaalilivvlcvsfsrh
[0070] Another exemplary Chikungunya virus structural polypeptide sequence is provided at Genbank Accession No. ABX40011.1, which is described below (SEQ ID No.2):
TABLE-US-00004 mefiptqtfynrryqprpwaprptiqvirprprpqrqagqlaqlisavnk ltmravpqqkprrnrknkkqrqkkqapqndpkqkkqppqkkpaqkkkkpg rrermcmkiendcifevkhegkvmgyaclvgdkvmkpahvkgtidnadla klafkrsskydlecaqipvhmksdaskfthekpegyynwhhgavqysggr ftiptgagkpgdsgrpifdnkgrvvaivlgganegartalsvvtwnkdiv tkitpegaeewslalpvlcllanttfpcsqppctpccyekepestlrmle dnvmrpgyyqllkasltcsphrqrrstkdnfnvykatrpylahcpdcgeg hschspialerirneatdgtlkiqvslqigiktddshdwtklrymdshtp adaeragllvrtsapctitgtmghfilarcpkgetltvgftdsrkishtc thpfhheppvigrerfhsrpqhgkelpcstyvqstaataeeievhmppdt pdrtlmtqqsgnvkitvngqtvrykcncggsnegltttdkvinnckidqc haavtnhknwqynsplvprnaelgdrkgkihipfplanvtcrvpkarnpt vtygknqvtmllypdhptllsyrnmgqepnyheewvthkkevtltvpteg levtwgnnepykywpqmstngtahghpheiilyyyelyptmtvvivsvas fvllsmvgtavgmcvcarrrcitpyeltpgatvpfllsllccvrttkaat yyeaaaylwneqqplfwlqaliplaalivlcnclkllpcccktlaflavm sigahtvsayehvtvipntvgvpyktlvnrpgyspmvlemelqsvtlept lsldyitceyktvipspyvkccgtaeckdkslpdyschvftgvypfmwgg aycfcdaentqlseahveksescktefasayrahtasasaklrvlyqgnn itvaayangdhavtvkdakfvvgpmssawtpfdnkivvykgdvynmdypp fgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsgfk ywlkergaslqhtapfgcqiatnpvravncavgnipisidipdaaftrvv dapsvtdmscevpacthssdfggvaiikytaskkgkcavhsmtnavtire advevegnsqlqisfstalasaefrvqvcstqvhcaaachppkdhivnyp ashttlgvqdisttamswvqkitggvglivavaalilivvlcvsfsrh.
[0071] An exemplary Venezuelan equine encephalitis virus structural polypeptide described below (SEQ ID NO.3):
TABLE-US-00005 mfpfqpmypmqpmpyrnpfaaprrpwfprtdpflamqvqeltrsmanltf kqrrdappegpsaakpkkeasqkqkgggqgkkkknqgkkkaktgppnpka qngnkkktnkkpgkrqrmvmklesdktfpimlegkingyacvvggklfrp mhvegkidndvlaalktkkaskydleyadvpqnmradtfkythekpqgyy swhhgavqyengrftvpkgvgakgdsgrpildnqgrvvaivlggvnegsr talsvvmwnekgvtvkytpenceqwslvttmcllanvtfpcaqppicydr kpaetlamlsvnvdnpgydelleaavkcpgrkrrsteelfneykltrpym arcircavgschspiaieavksdghdgyvrlqtssqygldssgnlkgrtm rydmhgtikeiplhqvslytsrpchivdghgyfllarcpagdsitmefkk dsvrhscsvpyevkfnpvgrelythppehgveqacqvyahdaqnrgayve mhlpgsevdsslvslsgssvtvtppdgtsalvececggtkisetinktkq fsqctkkeqcrayrlqndkwvynsdklpkaagatlkgklhvpflladgkc tvplapepmitfgfrsvslklhpknptylitrqladephythelisepav rnftvtekgwefvwgnhppkrfwaqetapgnphglphevithyyhrypms tilglsicaaiatvsvaastwlfcrsrvacltpyritpnaripfclavlc cartaraettwesldhlwnnnqqmfwiqlliplaalivvtrllrcvccvv pflvmagaagagayehattmpsqagisyntivnragyaplpisitptkik liptvnleyvtchyktgmdspaikccgsqectptyrpdeqckvftgvypf mwggaycfcdtentqvskayvmksddcladhaeaykahtasvqaflnitv gehsivttvyvngetpvnfngvkitagplstawtpfdrkivqyageiyny dfpeygagqpgafgdiqsrtvsssdlyantnlvlqrpkagaihvpytqap sgfeqwkkdkapslkftapfgceiytnpiraencavgsiplafdipdalf trvsetptlsaaectlnecvyssdfggiatvkysasksgkcavhvpsgta tlkeaavelteqgsatihfstanihpefrlqictsyvtckgdchppkdhi vthpqyhaqtftaavsktawtwltsllggsaviiiiglvlativamyvlt nqkhn.
[0072] In one embodiment, a first attachment site comprises an amino group, preferably an amino group of a lysine residue. In one embodiment, the second attachment site comprises sulfhydryl group, preferably, a sulfhydryl group of a cysteine.
[0073] In one embodiment, a conjugation of more than two substances (e.g. antigen and Chikungunya or Venezuelan equine encephalitis virus structural polypeptide) through a first attachment site or a second attachment site is achieved using chemical cross linker. Examples of the cross-linker include, but are not limited to, SMPH, Sulfo-MBS, Sulfo-EMCS, Sulfo-GMBS, Sulfo-SIAB, Sulfo-SMPB, Sulfo-SMCC, SVSB, SIA and other cross-linkers available from the Pierce Chemical Company.
[0074] According to the present invention, a Chikungunya or Venezuelan equine encephalitis virus like particle comprising a Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and an antigen, wherein said Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and said antigen are expressed as a fusion protein can be provided.
[0075] In one embodiment, the antigen can be fused with any site of the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide. For example, the antigen may be directly or indirectly linked to N- or C-terminal of the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide, or the antigen may be inserted into Chikungunya or Venezuelan equine encephalitis virus structural protein.
[0076] In one embodiment, at least one antigen is inserted into E2 of Chikungunya or Venezuelan equine encephalitis virus structural protein. For example, regarding Chikungunya virus structural protein, at least one antigen is inserted between residues 519 and 520 of SEQ ID Nos.1 or 2 (i.e. between G at 519-position and Q at 520-position of SEQ ID Nos.1 or 2); between residues 530 and 531 of SEQ ID Nos.1 or 2 (i.e. between G at 530-position and S at 531-position of SEQ ID Nos.1 or 2); between residues 531 and 532 of SEQ ID Nos.1 or 2 (i.e. between S at 531-position and N at 532-position of SEQ ID Nos.1 or 2); between residues 529 and 530 of SEQ ID Nos.1 or 2(i.e. between G at 529-position and G at 530-position of SEQ ID Nos.1 or 2); or between residues 510 and 511 of SEQ ID Nos.1 or 2(i.e. between S at 510-position and G at 511-position of SEQ ID Nos.1 or 2); or between residues 511 and 512 of SEQ ID Nos.1 or 2(i.e. between G at 511-position and N at 512-position of SEQ ID Nos.1 or 2); or between residues 509 and 510 of SEQ ID Nos.1 or 2(i.e. between Q at 509-position and S at 510-position of SEQ ID Nos.1 or 2).
[0077] For example, regarding Venezuelan equine encephalitis virus structural protein, at least one antigen is inserted between residues 517 and 518 of SEQ ID No.3 (i.e. between G at 517-position and S at 518-position of SEQ ID No.3); between residues 518 and 519 of SEQ ID No.3 (i.e. between S at 518-position and S at 519-position of SEQ ID No.3); between residues 519 and 520 of SEQ ID No.3 (i.e. between S at 519-position and V at 520-position of SEQ ID No.3); between residues 515 and 516 of SEQ ID No.3(i.e. between L at 515-position and S at 516-position of SEQ ID No.3); between residues 516 and 517 of SEQ ID No.3(i.e. between S at 516-position and G at 517-position of SEQ ID No.3); between residues 536 and 537 of SEQ ID No.3(i.e. between C at 536-position and G at 537-position of SEQ ID No.3) ; between residues 537 and 538 of SEQ ID No.3(i.e. between G at 537-position and G at 538-position of SEQ ID No.3) ; between residues 538 and 539 of SEQ ID No.3(i.e. between G at 538-position and T at 539-position of SEQ ID No.3).
[0078] The fusion protein may be expressed using a conventional technique in the art. A variety of expression systems can be used for the expression of the fusion protein. For example, the fusion protein can be expressed in 293 cells, Sf9 cells or E. coli.
[0079] A polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be a naturally occurring viral polypeptide or modified polypeptide thereof. In addition, a polypeptide derived from malaria antigen may be a naturally occurring polypeptide or modified polypeptide of the naturally occurring polypeptide or a fragment of the naturally occurring polypeptide or the modified peptide. The modified polypeptide may be a fragment of the naturally occurring virus structural polypeptide.
[0080] In one embodiment, the modified polypeptide derived from malaria antigen has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring polypeptide. In one embodiment, the modified peptide derived from malaria antigen is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a naturally occurring polypeptide derived from malaria antigen.
[0081] When a polypeptide derived from a virus is conjugated with a polypeptide derived from an antigen, a linker peptide including SG, GS, SGG, GGS SGSG and TRGGS may be used. Examples of conjugation of the polypeptide derived from a virus (referred to as "PFV" below) with the polypeptide derived from the antigen (referred to as "PFA" below) include, but not limited to: PFV-SG-PFA-GS-PFV; PFV-SG-PFA-GGS-PFV; PFV-SSG-PFA-GS-PFV; PFV-SGG-PFA-GGS-PFV; PFV-SGSG-PFA-GS-PFV; and PFA-SGG-PFA-TRGGS-PFV.
[0082] In one embodiment, the present invention provides a virus like particle comprising a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from malaria antigen, wherein the virus like particle is prepared by transfecting an expression vector comprising a nucleic acid molecule corresponding to the amino acid sequence represented by SEQ ID NO. 28, 31, 34, 37, 39, 41 or 43 into a mammalian cell (e.g. 293F cell). Regarding this embodiment, modified fusion protein can be also used for a virus like particle provided by the present invention, which can be prepared by transfecting an expression vector comprising a nucleic acid molecule corresponding to the amino acid sequence having at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to SEQ ID NO. 28, 31, 34, 37, 39, 41 or 43 into a mammalian cell (e.g. 293F cell).
[0083] In one embodiment, the present invention provides a virus like particle comprising or consisting of:
[0084] one or more capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV);
[0085] one or more E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); and
[0086] one or more E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), wherein malaria antigen is inserted into E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV). For example, present invention provides a virus like particle comprising or consisting of:
[0087] 240 capsids of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV);
[0088] 240 E1 s of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); and
[0089] 240 E2s of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), wherein malaria antigen is inserted into each of E2s of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV).
[0090] In this embodiment, the E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID No.50; the E1 may consist of an amino acid sequence represented by SEQ ID No.51; and the capsid may consist of an amino acid sequence represented by SEQ ID NO. 52; or
[0091] the E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID NO.53; the E1 may consist of an amino acid sequence represented by SEQ ID NO.54; and the capsid may consist of an amino acid sequence represented by SEQ ID NO. 55.
[0092] Further, regarding this embodiment, modified capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), modified E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) and modified E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be used for the virus like particle. For example, the modified capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the amino acid sequence represented by SEQ ID NO. 52 or SEQ ID No.55; the modified E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the amino acid sequence represented by SEQ ID NO. 51 or SEQ ID No.54; and/or the modified E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the amino acid sequence represented by SEQ ID NO. 50 or SEQ ID No.53.
[0093] Also, the modified capsid, E1 or E2 may be a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on the capsid consisting of an amino acid sequence represented by SEQ ID NO. 52 or SEQ ID No.55; E1 consisting of an amino acid sequence represented by SEQ ID NO. 51 or SEQ ID No.54; and/or E2 consisting of an amino acid sequence represented by SEQ ID NO. 50 or SEQ ID No.53.
(2) Nucleotide, Vector, Host Cell
[0094] In the second aspect, the present invention provides a nucleic acid molecule which is designed for expression of a particle as provided in the first aspect of the present invention.
[0095] In one embodiment, the present invention provides a nucleic acid molecule comprising a nucleotide sequence that encodes the Chikungunya or Venezuelan equine encephalitis virus like particle as described above.
[0096] Examples of the nucleotide sequence that encodes the Chikungunya or Venezuelan equine encephalitis virus like particle include, but are not limited to, a nucleotide sequence encoding envelope of Chikungunya virus Strain 37997, a nucleotide sequence encoding Capsid-envelope of Chikungunya virus Strain 37997, a nucleotide sequence encoding envelope of Chikungunya virus Strain LR2006 OPY-1, a nucleotide sequence encoding Capsid-envelope of Chikungunya virus LR2006 OPY-1, a nucleotide sequence encoding envelope of Venezuelan equine encephalitis virus Strain TC-83 and a nucleotide sequence encoding Capsid-envelope of Venezuelan equine encephalitis virus TC-83.
[0097] Regarding Chikungunya virus, an exemplary nucleotide sequence that encodes envelope is described below (SEQ ID No.4):
TABLE-US-00006 Atgagcctcgccctcccggtcttgtgcctgttggcaaacactacattccc ctgctctcagccgccttgcacaccctgctgctacgaaaaggaaccggaaa gcaccttgcgcatgcttgaggacaacgtgatgagacccggatactaccag ctactaaaagcatcgctgacttgctctccccaccgccaaagacgcagtac taaggacaattttaatgtctataaagccacaagaccatatctagctcatt gtcctgactgcggagaagggcattcgtgccacagccctatcgcattggag cgcatcagaaatgaagcaacggacggaacgctgaaaatccaggtctcttg cagatcgggataaagacagatgacagccacgattggaccaagctgcgcta tatggatagccatacgccagcggacgcggagcgagccggattgcttgtaa ggacttcagcaccgtgcacgatcaccgggaccatgggacactttattctc gcccgatgcccgaaaggagagacgctgacagtgggatttacggacagcag aaagatcagccacacatgcacacacccgttccatcatgaaccacctgtga taggtagggagaggttccactctcgaccacaacatggtaaagagttacct tgcagcacgtacgtgcagagcaccgctgccactgctgaggagatagaggt gcatatgcccccagatactcctgaccgcacgctgatgacgcagcagtctg gcaacgtgaagatcacagttaatgggcagacggtgcggtacaagtgcaac tgcggtggctcaaacgagggactgacaaccacagacaaagtgatcaataa ctgcaaaattgatcagtgccatgctgcagtcactaatcacaagaattggc aatacaactcccctttagtcccgcgcaacgctgaactcggggaccgtaaa ggaaagatccacatcccattcccattggcaaacgtgacttgcagagtgcc aaaagcaagaaaccctacagtaacttacggaaaaaaccaagtcaccatgc tgctgtatcctgaccatccgacactcttgtcttaccgtaacatgggacag gaaccaaattaccacgaggagtgggtgacacacaagaaggaggttacctt gaccgtgcctactgagggtctggaggtcacttggggcaacaacgaaccat acaagtactggccgcagatgtctacgaacggtactgctcatggtcaccca catgagataatcttgtactattatgagctgtaccccactatgactgtagt cattgtgtcggtggcctcgttcgtgcttctgtcgatggtgggcacagcag tgggaatgtgtgtgtgcgcacggcgcagatgcattacaccatatgaatta acaccaggagccactgttcccttcctgctcagcctgctatgctgcgtcag aacgaccaaggcggccacatattacgaggctgcggcatatctatggaacg aacagcagcccctgttctggttgcaggctcttatcccgctggccgccttg atcgtcctgtgcaactgtctgaaactcttgccatgctgctgtaagaccct ggcttttttagccgtaatgagcatcggtgcccacactgtgagcgcgtacg aacacgtaacagtgatcccgaacacggtgggagtaccgtataagactctt gtcaacagaccgggttacagccccatggtgttggagatggagctacaatc agtcaccttggaaccaacactgtcacttgactacatcacgtgcgagtaca aaactgtcatcccctccccgtacgtgaagtgctgtggtacagcagagtgc aaggacaagagcctaccagactacagctgcaaggtctttactggagtcta cccatttatgtggggcggcgcctactgcttttgcgacgccgaaaatacgc aattgagcgaggcacatgtagagaaatctgaatcttgcaaaacagagttt gcatcggcctacagagcccacaccgcatcggcgtcggcgaagctccgcgt cctttaccaaggaaacaacattaccgtagctgcctacgctaacggtgacc atgccgtcacagtaaaggacgccaagtttgtcgtgggcccaatgtcctcc gcctggacaccttttgacaacaaaatcgtggtgtacaaaggcgacgtcta caacatggactacccaccttttggcgcaggaagaccaggacaatttggtg acattcaaagtcgtacaccggaaagtaaagacgtttatgccaacactcag ttggtactacagaggccagcagcaggcacggtacatgtaccatactctca ggcaccatctggcttcaagtattggctgaaggaacgaggagcatcgctac agcacacggcaccgttcggttgccagattgcgacaaacccggtaagagct gtaaattgcgctgtggggaacataccaatttccatcgacataccggatgc ggcctttactagggttgtcgatgcaccctctgtaacggacatgtcatgcg aagtaccagcctgcactcactcctccgactttgggggcgtcgccatcatc aaatacacagctagcaagaaaggtaaatgtgcagtacattcgatgaccaa cgccgttaccattcgagaagccgacgtagaagtagaggggaactcccagc tgcaaatatccttctcaacagccctggcaagcgccgagtttcgcgtgcaa gtgtgctccacacaagtacactgcgcagccgcatgccaccctccaaagga ccacatagtcaattacccagcatcacacaccacccttggggtccaggata tatccacaacggcaatgtcttgggtgcagaagattacgggaggagtagga ttaattgttgctgttgctgccttaattttaattgtggtgctatgcgtgtc gtttagcaggcac .
[0098] Regarding Chikungunya virus, another exemplary nucleotide sequence that encodes envelope is described below (SEQ ID No.5):
TABLE-US-00007 Atgagtcttgccatcccagttatgtgcctgttggcaaacaccacgttccc ctgctcccagcccccttgcacgccctgctgctacgaaaaggaaccggagg aaaccctacgcatgcttgaggacaacgtcatgagacctgggtactatcag ctgctacaagcatccttaacatgttctccccaccgccagcgacgcagcac caaggacaacttcaatgtctataaagccacaagaccatacttagctcact gtcccgactgtggagaagggcactcgtgccatagtcccgtagcactagaa cgcatcagaaatgaagcgacagacgggacgctgaaaatccaggtctcctt gcaaatcggaataaagacggatgacagccacgattggaccaagctgcgtt atatggacaaccacatgccagcagacgcagagagggcggggctatttgta agaacatcagcaccgtgtacgattactggaacaatgggacacttcatcct ggcccgatgtccaaaaggggaaactctgacggtgggattcactgacagta ggaagattagtcactcatgtacgcacccatttcaccacgaccctcctgtg ataggtcgggaaaaattccattcccgaccgcagcacggtaaagagctacc ttgcagcacgtacgtgcagagcaccgccgcaactaccgaggagatagagg tacacatgcccccagacacccctgatcgcacattaatgtcacaacagtcc ggcaacgtaaagatcacagtcaatggccagacggtgcggtacaagtgtaa ttgcggtggctcaaatgaaggactaacaactacagacaaagtgattaata actgcaaggttgatcaatgtcatgccgcggtcaccaatcacaaaaagtgg cagtataactcccctctggtcccgcgtaatgctgaacttggggaccgaaa aggaaaaattcacatcccgtttccgctggcaaatgtaacatgcagggtgc ctaaagcaaggaaccccaccgtgacgtacgggaaaaaccaagtcatcatg ctactgtatcctgaccacccaacactcctgtcctaccggaatatgggaga agaaccaaactatcaagaagagtgggtgatgcataagaaggaagtcgtgc taaccgtgccgactgaagggctcgaggtcacgtggggcaacaacgagccg tataagtattggccgcagttatctacaaacggtacagcccatggccaccc gcatgagataattctgtattattatgagctgtaccccactatgactgtag tagttgtgtcagtggccacgttcatactcctgtcgatggtgggtatggca gcggggatgtgcatgtgtgcacgacgcagatgcatcacaccgtatgaact gacaccaggagctaccgtccctttcctgcttagcctaatatgctgcatca gaacagctaaagcggccacataccaagaggctgcgatatacctgtggaac gagcagcaacctttgttttggctacaagcccttattccgctggcagccct gattgttctatgcaactgtctgagactcttaccatgctgctgtaaaacgt tggcttttttagccgtaatgagcgtcggtgcccacactgtgagcgcgtac gaacacgtaacagtgatcccgaacacggtgggagtaccgtataagactct agtcaatagacctggctacagccccatggtattggagatggaactactgt cagtcactttggagccaacactatcgcttgattacatcacgtgcgagtac aaaaccgtcatcccgtctccgtacgtgaagtgctgcggtacagcagagtg caaggacaaaaacctacctgactacagctgtaaggtcttcaccggcgtct acccatttatgtggggcggcgcctactgcttctgcgacgctgaaaacacg cagttgagcgaagcacacgtggagaagtccgaatcatgcaaaacagaatt tgcatcagcatacagggctcataccgcatctgcatcagctaagctccgcg tcctttaccaaggaaataacatcactgtaactgcctatgcaaacggcgac catgccgtcacagttaaggacgccaaattcattgtggggccaatgtcttc agcctggacacctttcgacaacaaaattgtggtgtacaaaggtgacgtct ataacatggactacccgccctttggcgcaggaagaccaggacaatttggc gatatccaaagtcgcacacctgagagtaaagacgtctatgctaatacaca actggtactgcagagaccggctgtgggtacggtacacgtgccatactctc aggcaccatctggctttaagtattggctaaaagaacgcggggcgtcgctg cagcacacagcaccatttggctgccaaatagcaacaaacccggtaagagc ggtgaactgcgccgtagggaacatgcccatctccatcgacataccggaag cggccttcactagggtcgtcgacgcgccctctttaacggacatgtcgtgc gaggtaccagcctgcacccattcctcagactttgggggcgtcgccattat taaatatgcagccagcaagaaaggcaagtgtgcggtgcattcgatgacta acgccgtcactattcgggaagctgagatagaagttgaagggaattctcag ctgcaaatctctttctcgacggccttagccagcgccgaattccgcgtaca agtctgttctacacaagtacactgtgcagccgagtgccaccccccgaagg accacatagtcaactacccggcgtcacataccaccctcggggtccaggac atctccgctacggcgatgtcatgggtgcagaagatcacgggaggtgtggg actggttgttgctgttgccgcactgattctaatcgtggtgctatgcgtgt cgttcagcaggcac .
[0099] Regarding Chikungunya virus, an exemplary nucleotide sequence that encodes a Capsid-envelope is described below (SEQ ID No.6):
TABLE-US-00008 atggagttcatcccgacgcaaactttctataacagaaggtaccaaccccg accctgggccccacgccctacaattcaagtaattagacctagaccacgtc cacagaggcaggctgggcaactcgcccagctgatctccgcagtcaacaaa ttgaccatgcgcgcggtacctcaacagaagcctcgcagaaatcggaaaaa caagaagcaaaggcagaagaagcaggcgccgcaaaacgacccaaagcaaa agaagcaaccaccacaaaagaagccggctcaaaagaagaagaaaccaggc cgtagggagagaatgtgcatgaaaattgaaaatgattgcatcttcgaagt caagcatgaaggcaaagtgatgggctacgcatgcctggtgggggataaag taatgaaaccagcacatgtgaagggaactatcgacaataccgatctggct aaactggcctttaagcggtcgtctaaatacgatcttgaatgtgcacagat accggtgcacatgaagtctgatgcctcgaagtttacccacgagaaacccg aggggtactataactggcatcacggagcagtgcagtattcaggaggccgg ttcactatcccgacgggtgcaggcaagccgggagacagcggcagaccgat cttcgacaacaaaggacgggtggtggccatcgtcctaggaggggccaacg aaggtgcccgcacggccctctccgtggtgacgtggaacaaagacatcgtc acaaaaattacccctgagggagccgaagagtggagcctcgccctcccggt cttgtgcctgttggcaaacactacattcccctgctctcagccgccttgca caccctgctgctacgaaaaggaaccggaaagcaccttgcgcatgcttgag gacaacgtgatgagacccggatactaccagctactaaaagcatcgctgac ttgctctccccaccgccaaagacgcagtactaaggacaattttaatgtct ataaagccacaagaccatatctagctcattgtcctgactgcggagaaggg cattcgtgccacagccctatcgcattggagcgcatcagaaatgaagcaac ggacggaacgctgaaaatccaggtctctttgcagatcgggataaagacag atgacagccacgattggaccaagctgcgctatatggatagccatacgcca gcggacgcggagcgagccggattgcttgtaaggacttcagcaccgtgcac gatcaccgggaccatgggacactttattctcgcccgatgcccgaaaggag agacgctgacagtgggatttacggacagcagaaagatcagccacacatgc acacacccgttccatcatgaaccacctgtgataggtagggagaggttcca ctctcgaccacaacatggtaaagagttaccttgcagcacgtacgtgcaga gcaccgctgccactgctgaggagatagaggtgcatatgcccccagatact cctgaccgcacgctgatgacgcagcagtctggcaacgtgaagatcacagt taatgggcagacggtgcggtacaagtgcaactgcggtggctcaaacgagg gactgacaaccacagacaaagtgatcaataactgcaaaattgatcagtgc catgctgcagtcactaatcacaagaattggcaatacaactcccctttagt cccgcgcaacgctgaactcggggaccgtaaaggaaagatccacatcccat tcccattggcaaacgtgacttgcagagtgccaaaagcaagaaaccctaca gtaacttacggaaaaaaccaagtcaccatgctgctgtatcctgaccatcc gacactcttgtcttaccgtaacatgggacaggaaccaaattaccacgagg agtgggtgacacacaagaaggaggttaccttgaccgtgcctactgagggt ctggaggtcacttggggcaacaacgaaccatacaagtactggccgcagat gtctacgaacggtactgctcatggtcacccacatgagataatcttgtact attatgagctgtaccccactatgactgtagtcattgtgtcggtggcctcg ttcgtgcttctgtcgatggtgggcacagcagtgggaatgtgtgtgtgcgc acggcgcagatgcattacaccatatgaattaacaccaggagccactgttc ccttcctgctcagcctgctatgctgcgtcagaacgaccaaggcggccaca tattacgaggctgcggcatatctatggaacgaacagcagcccctgttctg gttgcaggctcttatcccgctggccgccttgatcgtcctgtgcaactgtc tgaaactcttgccatgctgctgtaagaccctggcttttttagccgtaatg agcatcggtgcccacactgtgagcgcgtacgaacacgtaacagtgatccc gaacacggtgggagtaccgtataagactcttgtcaacagaccgggttaca gccccatggtgttggagatggagctacaatcagtcaccttggaaccaaca ctgtcacttgactacatcacgtgcgagtacaaaactgtcatcccctcccc gtacgtgaagtgctgtggtacagcagagtgcaaggacaagagcctaccag actacagctgcaaggtctttactggagtctacccatttatgtggggcggc gcctactgcttttgcgacgccgaaaatacgcaattgagcgaggcacatgt agagaaatctgaatcttgcaaaacagagtttgcatcggcctacagagccc acaccgcatcggcgtcggcgaagctccgcgtcctttaccaaggaaacaac attaccgtagctgcctacgctaacggtgaccatgccgtcacagtaaagga cgccaagtttgtcgtgggcccaatgtcctccgcctggacaccttttgaca acaaaatcgtggtgtacaaaggcgacgtctacaacatggactacccacct tttggcgcaggaagaccaggacaatttggtgacattcaaagtcgtacacc ggaaagtaaagacgtttatgccaacactcagttggtactacagaggccag cagcaggcacggtacatgtaccatactctcaggcaccatctggcttcaag tattggctgaaggaacgaggagcatcgctacagcacacggcaccgttcgg ttgccagattgcgacaaacccggtaagagctgtaaattgcgctgtgggga acataccaatttccatcgacataccggatgcggcctttactagggttgtc gatgcaccctctgtaacggacatgtcatgcgaagtaccagcctgcactca ctcctccgactttgggggcgtcgccatcatcaaatacacagctagcaaga aaggtaaatgtgcagtacattcgatgaccaacgccgttaccattcgagaa gccgacgtagaagtagaggggaactcccagctgcaaatatccttctcaac agccctggcaagcgccgagtttcgcgtgcaagtgtgctccacacaagtac actgcgcagccgcatgccaccctccaaaggaccacatagtcaattaccca gcatcacacaccacccttggggtccaggatatatccacaacggcaatgtc ttgggtgcagaagattacgggaggagtaggattaattgttgctgttgctg ccttaattttaattgtggtgctatgcgtgtcgtttagcaggcactaa.
[0100] Regarding Chikungunya virus, another exemplary nucleotide sequence that encodes a Capsid-envelope is described below (SEQ ID No.7):
TABLE-US-00009 atggagttcatcccaacccaaactttttacaataggaggtaccagcctcg accctggactccgcgccctactatccaagtcatcaggcccagaccgcgcc ctcagaggcaagctgggcaacttgcccagctgatctcagcagttaataaa ctgacaatgcgcgcggtaccacaacagaagccacgcaggaatcggaagaa taagaagcaaaagcaaaaacaacaggcgccacaaaacaacacaaatcaaa agaagcagccacctaaaaagaaaccggctcaaaagaaaaagaagccgggc cgcagagagaggatgtgcatgaaaatcgaaaatgattgtattttcgaagt caagcacgaaggtaaggtaacaggttacgcgtgcctggtgggggacaaag taatgaaaccagcacacgtaaaggggaccatcgataacgcggacctggcc aaactggcctttaagcggtcatctaagtatgaccttgaatgcgcgcagat acccgtgcacatgaagtccgacgcttcgaagttcacccatgagaaaccgg aggggtactacaactggcaccacggagcagtacagtactcaggaggccgg ttcaccatccctacaggtgctggcaaaccaggggacagcggcagaccgat cttcgacaacaagggacgcgtggtggccatagtcttaggaggagctaatg aaggagcccgtacagccctctcggtggtgacctggaataaagacattgtc actaaaatcacccccgagggggccgaagagtggagtcttgccatcccagt tatgtgcctgttggcaaacaccacgttcccctgctcccagcccccttgca cgccctgctgctacgaaaaggaaccggaggaaaccctacgcatgcttgag gacaacgtcatgagacctgggtactatcagctgctacaagcatccttaac atgttctccccaccgccagcgacgcagcaccaaggacaacttcaatgtct ataaagccacaagaccatacttagctcactgtcccgactgtggagaaggg cactcgtgccatagtcccgtagcactagaacgcatcagaaatgaagcgac agacgggacgctgaaaatccaggtctccttgcaaatcggaataaagacgg atgacagccacgattggaccaagctgcgttatatggacaaccacatgcca gcagacgcagagagggcggggctatttgtaagaacatcagcaccgtgtac gattactggaacaatgggacacttcatcctggcccgatgtccaaaagggg aaactctgacggtgggattcactgacagtaggaagattagtcactcatgt acgcacccatttcaccacgaccctcctgtgataggtcgggaaaaattcca ttcccgaccgcagcacggtaaagagctaccttgcagcacgtacgtgcaga gcaccgccgcaactaccgaggagatagaggtacacatgcccccagacacc cctgatcgcacattaatgtcacaacagtccggcaacgtaaagatcacagt caatggccagacggtgcggtacaagtgtaattgcggtggctcaaatgaag gactaacaactacagacaaagtgattaataactgcaaggttgatcaatgt catgccgcggtcaccaatcacaaaaagtggcagtataactcccctctggt cccgcgtaatgctgaacttggggaccgaaaaggaaaaattcacatcccgt ttccgctggcaaatgtaacatgcagggtgcctaaagcaaggaaccccacc gtgacgtacgggaaaaaccaagtcatcatgctactgtatcctgaccaccc aacactcctgtcctaccggaatatgggagaagaaccaaactatcaagaag agtgggtgatgcataagaaggaagtcgtgctaaccgtgccgactgaaggg ctcgaggtcacgtggggcaacaacgagccgtataagtattggccgcagtt atctacaaacggtacagcccatggccacccgcatgagataattctgtatt attatgagctgtaccccactatgactgtagtagttgtgtcagtggccacg ttcatactcctgtcgatggtgggtatggcagcggggatgtgcatgtgtgc acgacgcagatgcatcacaccgtatgaactgacaccaggagctaccgtcc ctttcctgcttagcctaatatgctgcatcagaacagctaaagcggccaca taccaagaggctgcgatatacctgtggaacgagcagcaacctttgttttg gctacaagcccttattccgctggcagccctgattgttctatgcaactgtc tgagactcttaccatgctgctgtaaaacgttggcttttttagccgtaatg agcgtcggtgcccacactgtgagcgcgtacgaacacgtaacagtgatccc gaacacggtgggagtaccgtataagactctagtcaatagacctggctaca gccccatggtattggagatggaactactgtcagtcactttggagccaaca ctatcgcttgattacatcacgtgcgagtacaaaaccgtcatcccgtctcc gtacgtgaagtgctgcggtacagcagagtgcaaggacaaaaacctacctg actacagctgtaaggtcttcaccggcgtctacccatttatgtggggcggc gcctactgcttctgcgacgctgaaaacacgcagttgagcgaagcacacgt ggagaagtccgaatcatgcaaaacagaatttqcatcagcatacagggctc ataccgcatctgcatcagctaagctccgcgtcctttaccaaggaaataac atcactgtaactgcctatgcaaacggcgaccatgccgtcacagttaagga cgccaaattcattgtggggccaatgtcttcagcctggacacctttcgaca acaaaattgtggtgtacaaaggtgacgtctataacatggactacccgccc tttggcgcaggaagaccaggacaatttggcgatatccaaagtcgcacacc tgagagtaaagacgtctatgctaatacacaactggtactgcagagaccgg ctgtgggtacggtacacgtgccatactctcaggcaccatctggctttaag tattggctaaaagaacgcggggcgtcgctgcagcacacagcaccatttgg ctgccaaatagcaacaaacccggtaagagcggtgaactgcgccgtaggga acatgcccatctccatcgacataccggaagcggccttcactagggtcgtc gacgcgccctctttaacggacatgtcgtgcgaggtaccagcctgcaccca ttcctcagactttgggggcgtcgccattattaaatatgcagccagcaaga aaggcaagtgtgcggtgcattcgatgactaacgccgtcactattcgggaa gctgagatagaagttgaagggaattctcagctgcaaatctctttctcgac ggccttagccagcgccgaattccgcgtacaagtctgttctacacaagtac actgtgcagccgagtgccaccccccgaaggaccacatagtcaactacccg gcgtcacataccaccctcggggtccaggacatctccgctacggcgatgtc atgggtgcagaagatcacgggaggtgtgggactggttgttgctgttgccg cactgattctaatcgtggtgctatgcgtgtcgttcagcaggcactaa.
[0101] In one embodiment, the present invention provides a vector comprising the nucleic acid molecule as described above, wherein the vector optionally comprises an expression control sequence operably linked to the nucleic acid molecule.
[0102] Examples of an expression control sequence include, but are not limited to, promoter such as CMV promoter, phage lambda PL promoter, the E. coli lac, phoA and tac promoters, the SV40 early and late promoters, and promoters of retroviral LTRs.
[0103] In this embodiment, the vector comprising an expression control sequence operably linked to the nucleic acid molecule as described above can be used as an expression vector for preparing the particle provided by the first aspect of the present invention.
[0104] The expression vectors can be prepared by a person skilled in the art based on WO/2012/006180, the entire contents of which are incorporated by reference herein.
[0105] Examples of vectors which can be used for expressing a virus like particle comprising a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide of antigen include a vector shown in VLP_CHI 512 vector (SEQ ID No.8) containing CHIKV VLP polynucleotide (SEQ ID No. 13; corresponding amino acid sequence represented by SEQ ID No.14); and VLP_CHI 532 vector (SEQ ID No. 9) containing CHIKV VLP polynucleotide (SEQ ID No. 15; corresponding amino acid sequence represented by SEQ ID No.16).
[0106] The expression vectors can be prepared by a person skilled in the art based on US2012/0003266, the entire contents of which are incorporated by reference herein.
[0107] Examples of vectors which can be used for expressing a virus like particle comprising a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide of antigen include a vector shown in VLP_VEEV VLP 518 vector (SEQ ID No.10) containing VEEV VLP polynucleotide (SEQ ID No. 17; corresponding amino acid sequence represented by SEQ ID No.18); VLP_VEEV VLP 519 vector (SEQ ID No.11) containing VEEV VLP polynucleotide (SEQ ID No. 19; corresponding amino acid sequence represented by SEQ ID No.20); and VLP_VEEV VLP 538 vector (SEQ ID No. 12) containing VEEV VLP polynucleotide (SEQ ID No. 21; corresponding amino acid sequence represented by SEQ ID No.22).
[0108] In one embodiment, the present invention provides a nucleic acid molecule which is designed for expression of a virus like particle comprising a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) or Venezuela equine encephalitis virus (VEEV) and a polypeptide derived from malaria antigen, which consists of a nucleotide sequence represented by SEQ ID Nos.26-27, 29-30, 32-33, 35-36, 38, 40 or 42.
[0109] In one embodiment, the present invention provides a nucleic acid molecule which is modified from the nucleic acid molecule having a nucleotide sequence represented by any one of SEQ ID Nos.26-27, 29-30, 32-33 or 35-36, 38, 40 or 42. The modified nucleic acid molecule may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% nucleotide sequence identity to the nucleic acid molecule having a nucleotide sequence represented by any one of SEQ ID Nos.26-27, 29-30, 32-33, 35-36, 38, 40 or 42. Also, the modified nucleic acid molecule may be a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on the nucleic acid molecule having a nucleotide sequence represented by any one of SEQ ID Nos.26-27, 29-30, 32-33, 35-36, 38, 40 or 42.
(3) Composition or Vaccine
[0110] In the third aspect, the present invention provides a composition or vaccine comprising the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention.
[0111] In one embodiment, the present invention provides a composition or vaccine comprising the Alphavirus or Flavivirus virus like particle (e.g. Chikungunya virus like particle or Venezuelan equine encephalitis virus like particle) as described above or the nucleic acid molecule as described above. The content of the Alphavirus or Flavivirus virus like particle and the content of the nucleic acid molecule may be 0.00001-1 w/w %.
[0112] Dosage amount of the particle provided in the first aspect of the present invention (e.g. CHIKV VLP or VEEV VLP) may be 1-500 .mu.g/day.
[0113] One or more malaria antigens may be used for one composition or one vaccine provided by the third aspect of the present invention.
[0114] The composition or vaccine may further comprise a pharmaceutical acceptable carrier and/or adjuvant. Examples of adjuvant include, but are not limited to, aluminium salts, sodium hydroxide, Freund's complete adjuvant, Freund's incomplete adjuvant and Ribi solution (Sigma Adjuvant system, Sigma-Aldrich). The composition or vaccine provided in the third aspect of the present invention may contain buffering agent such as dibasic sodium phosphate hydrate, sodium dihydrogen phosphate and sodium chloride; and preserving agent such as thimerosal. In one embodiment, the composition or vaccine is an aqueous solution containing 0.001-1 w/w % of the particle provided in the first aspect of the present invention (e.g. CHIKV VLP or VEEV VLP), 1-10 w/w % of buffering agent, 0.01-1 w/w % of adjuvant and 0.00001-0.001 w/w % of preserving agent.
[0115] A skilled person can prepare the pharmaceutical composition and vaccine using conventional technique. For example, the particle provided in the first aspect of the present invention is mixed with buffer solution having physiological pH (e.g. pH 5-9, pH7) to prepare the pharmaceutical composition and vaccine provided in the third aspect of the present invention.
[0116] The pharmaceutical composition of the present invention may contain a single active ingredient or a combination of two or more active ingredients, as far as they are not contrary to the objects of the present invention. For example, cytokines including chemokines, anti-body of cytokines such as anti TNF antibody (e.g. infliximab, adalimumab), anti-VEGF antibody (e.g. bevacizumab and ranibizumab), cytokine receptor antagonist such as anti HER2 antibody (e.g. Trastuzumab), anti EGF receptor antibody (e.g. Cetuximab), anti VEGF aptamer (e.g. Pegaptanib) and immunomodulator such as cyclosporine, tacrolimus, ubenimex may be used for the combination therapy.
[0117] In a combination of plural active ingredients, their respective contents may be suitably increased or decreased in consideration of their therapeutic effects and safety.
[0118] The term "combination" used herein means two or more active ingredient are administered to a patient simultaneously in the form of a single entity or dosage, or are both administered to a patient as separate entities either simultaneously or sequentially with no specific time limits, wherein such administration provides therapeutically effective levels of the two components in the body, preferably at the same time.
[0119] In one embodiment, the composition is a vaccine composition including a DNA vaccine. In one embodiment, the DNA vaccine provided by the present invention comprises CpG containing oligonucleotide.
[0120] The composition or vaccine provided in the third aspect of the present invention can be administered one or more times. When the composition or vaccine provided in the third aspect of the present invention is administered more than one time, different particle provided in the first aspect of the present invention (e.g. CHIKV VLP or VEEV VLP) may be used for each of the administration. In one embodiment, combination of immunization using CHIKV VLP provided in the first aspect of the invention and immunization using VEEV VLP provided in the first aspect of the invention is employed. For example, CHIKV VLP provided in the first aspect of the present invention may be used for the 1st immunization and VEEV VLP provided in the first aspect of the present invention may be used for the 2nd immunization, or VEEV VLP provided in the first aspect of the present invention may be used for the 1st immunization and CHIKV VLP provided in the first aspect of the present invention may be used for the 2nd immunization.
[0121] A skilled person can determine timing of immunization using the composition or vaccine provided in the third aspect of the present invention. For example, 2nd immunization is performed 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 weeks after 1st immunization.
[0122] In one embodiment, the present invention provides a kit comprising
[0123] (a) a vaccine composition comprising the particle provided in the first aspect of the present invention; and
[0124] (b) another vaccine composition comprising the particle provided in the first aspect of the present invention, wherein the particle contained in (a) is a virus like particle which is different from the particle contained in (b). In this embodiment, the particle contained in (a) may be Chikungunya virus like particle and the particle contained in (b) may be Venezuelan equine encephalitis virus like particle.
[0125] In one embodiment, the present invention provides a kit comprising
[0126] (a) a vaccine composition comprising the particle provided in the first aspect of the present invention; and
[0127] (b) another vaccine composition comprising the particle provided in the first aspect of the present invention,
[0128] (c) one or more vaccine composition, each of which comprises the particle provided in the first aspect of the present invention,
[0129] wherein (a) is used for priming immunization and (b) and (c) are used for boosting immunization; and the particle contained in (a) is a virus like particle which is different from the particle contained in (b); and the particle contained in (c) is different from the particle contained in (a) and (b), or the same as the particle contained in (a) or (b).
[0130] The respective vaccine compositions contained in the above-described kit may be administered simultaneously, separately or sequentially.
[0131] The Alphavirus or Flavivirus virus like particle (e.g. Chikungunya virus or Venezuelan equine encephalitis virus) provided in the first aspect of the present invention or the nucleic acid molecule provided by the second aspect of the invention can be used for the composition and vaccine provided in the third aspect of the present invention.
[0132] For example, Chikungunya or Venezuelan equine encephalitis virus like particle comprising or consisting of:
[0133] one or more (e.g. 240) capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV);
[0134] one or more (e.g. 240) E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); and
[0135] one or more (e.g. 240) E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), wherein malaria antigen is inserted into E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be used for preparing the composition or vaccine provided in the third aspect of the present invention. The E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID No.50; the E1 may consist of an amino acid sequence represented by SEQ ID No.51; and the capsid may consist of an amino acid sequence represented by SEQ ID NO. 52; or
[0136] the E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID NO.53; the E1 may consist of an amino acid sequence represented by SEQ ID NO.54; and the capsid may consist of an amino acid sequence represented by SEQ ID NO. 55.
[0137] The composition or vaccine provided in the third aspect of the present invention can be administered to a mammal (e.g. human) intramuscularly (i.m.), intracutaneously (i.c.), subcutaneously (s.c.), intradermally (i.d.) or intraperitoneally (i.p.).
[0138] The composition or vaccine provided in the third aspect of the present invention may be used for treating or preventing malaria.
[0139] Thus, use of the Alphavirus or Flavivirus (e.g. Chikungunya virus or Venezuelan equine encephalitis virus) virus like particle provided in the first aspect of the present invention or the nucleic acid molecule provided by the second aspect of the invention for manufacturing a pharmaceutical composition or vaccine for treating or preventing malaria is also provided by the present invention.
(4) Method of Producing an Antibody, Method of Immunomodulation, Method of Treating Malaria, Method of Inducing and/or Enhancing Immune Response Against a Malaria Antigen in a Mammal, Method of Passive Immunization, Method of Presenting an Antigen on Macrophage, and Method for Producing a Particle
[0140] In the fourth aspect, the present invention provides a method of producing an antibody, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0141] The antibody produced in the fourth aspect of the present invention may be humanized using a conventional technique. Thus, in one embodiment, the method provided in the fourth aspect of the invention further comprises a step of humanizing non-human mammal produced antibody.
[0142] The particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention may be administered directly into the patient, into the affected organ or systemically, or applied ex vivo to cells derived from the patient or a human cell line which are subsequently administered to the patient, or used in vitro to select a subpopulation from immune cells such as B-cell and T-cell derived from the patient, which are then re-administered to the patient.
[0143] According to the present invention, the virus like particle can be applied for the immune therapy.
[0144] In the fifth aspect, the present invention provides a method of immunomodulation, a method of treating malaria, a method of inducing and/or enhancing immune response against a malaria antigen in a mammal comprising administering the composition provided in the third aspect of the present invention to a mammal.
[0145] In sixth aspect, the present invention provides a method of passive immunization against a malaria-causing pathogen, comprising administering the antibody provided in the fourth aspect of the present invention to a mammal.
[0146] In seventh aspect, the present invention provides a method of presenting a malaria antigen on macrophage, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0147] In eighth aspect, the present invention provides a method for producing the particle provided in the first aspect of the present invention, comprising preparing a vector designed for expression of said particle; culturing a cell which is transfected with said vector to express said particle; and recovering said particle.
[0148] Examples of mammal include, but are not limited to, a human.
[0149] In one embodiment, the present invention provides a method of producing an antibody against malaria antigen, comprising contacting the Chikungunya or Venezuelan equine encephalitis virus like particle as described above and/or the nucleic acid molecule as described above to a mammal. The produced antibody may be an antibody which can specifically bind to a malaria antigen comprised in the Chikungunya or Venezuelan equine encephalitis virus like particle or a malaria antigen encoded by the nucleic acid molecule. The method of producing an antibody provided by the present invention may be a useful for producing a monoclonal or polyclonal antibody against a malaria antigen.
[0150] In one embodiment, an antibody against malaria antigen obtained by the method of producing an antibody according to the present invention is used for passive immunization. The method of passive immunization may comprise administering the obtained antibody to a mammal.
[0151] In one preferred embodiment, the immunomodulation provided by the present invention is inducing and/or enhancing immune response against malaria antigen in a mammal. Thus, in one embodiment, the present invention provides a method of inducing and/or enhancing immune response against malaria antigen in a mammal, comprising administering an effective amount of the composition as described above to the mammal.
[0152] Given the symptom of patients infected with Chikungunya or Venezuelan equine encephalitis together with unusual big molecule of Chikungunya or Venezuelan equine encephalitis, this VLP can act effectively and efficiently to target macrophage and its composition such as cytokines and immunomodulative compounds.
[0153] In one aspect, the present invention provides a method of presenting an antigen on macrophage, comprising administering the Chikungunya or Venezuelan equine encephalitis virus like particle as described above and/or the nucleic acid molecule as described above to a mammal. The Chikungunya or Venezuelan equine encephalitis virus like particle provided by the present invention is good to target macrophage. In one embodiment, the Chikungunya or Venezuelan equine encephalitis virus like particle provided by the present invention is a kind of delivery system of the at least one antigen, which is comprised in the Chikungunya or Venezuelan equine encephalitis virus like particle, to macrophage.
[0154] In one embodiment, the present invention provides a method for producing Chikungunya or Venezuelan equine encephalitis virus like particle provided in the first aspect of the present invention, comprising preparing a vector designed for expression of said particle; culturing a cell which is transfected with said vector to express said particle; and recovering said particle. In this embodiment, transfection can be conducted using a conventional method. Cells using for the transfection may be 293 cells. Recovering VLP may include collecting a conditioned medium after cells are transfected with a vector, and may further include purify VLP from the conditioned medium using ultracentrifugation.
[0155] The present invention will be described in detail with reference to the following example, which, however, is not intended to limit the scope of the present invention.
EXAMPLES
Example 1
Preparation of Chikungunya Virus (CHIKV) Like Particle Comprising a Virus Structural Polypeptide and a Fragment of Malaria Antigen
[0156] The following polynucleotides of malaria CSP1 proteins are used. N terminal linker is SGG and C terminal linker is GGS.
VLP74 (6 Repeat of NPNA Amino Acid Sequence)
TABLE-US-00010
[0157] (SEQ ID No.: 46) Sggnpnanpnanpnanpnanpnanpnaggs (SEQ ID No.: 47) (Tccggaggaaacccgaatgccaatcccaacgcgaaccccaatgctaacc caaatgccaacccaaacgccaaccccaacgctggtggatcc)
VLP78 (25 Repeat of NPNA Amino Acid Sequence)
TABLE-US-00011
[0158] (SEQ ID No.: 48) Sggnpnanpnanpnanpnanpnanpnvdpnanpnanpnanpnanpnanpn anpnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpnan pnaggs (SEQ ID No.: 49) (tccggaggaaacccgaatgccaatcccaacgcgaaccccaacgctaacc ccaacgccaatccgaatgcaaacccgaacgttgacccaaacgccaacccg aatgccaatcccaacgcgaaccccaatgctaacccaaatgccaacccaaa cgccaaccccaacgctaatccaaacgccaaccctaacgccaatcccaacg cgaatcctaacgctaatcccaacgcaaatcccaatgctaatccgaacgcg aaccctaatgcaaaccccaacgccaacccgaacgctaacccgaacgctaa tcccaacgccggtggatcc)
[0159] The respective polynucleotides was inserted between the codons encoding Ser at 531-position and Asn at 532-position of SEQ ID Nos.15 or 16 (SEQ ID Nos.1 or 2) to construct a plasmid (hereinafter referred to as CHIKV-VLP74 or 78) for expressing Chikungunya virus like particle where the modified VLP74 or 78-derived peptide is inserted into E2 of Chikungunya virus structural polypeptide.
[0160] 293F cells (Lifetechnology) were transfected with the plasmid using PEI (GE Healthcare) or GeneX (ATCC). 4 days after the transfection, the conditioned medium was collected and centrifuged at 3000 rpm for 15 minutes to separate it from cells. The supernatant was filtrated using 0.45 .mu.m filter to obtain virus like particles. The virus like particles were concentrated using TFF column and purified using QXL column (GE Healthcare) to obtain purified virus like particles. When animals were immunized with virus like particles, the purified virus like particles were further concentrated using spin column (Molecular Weight-cutoff: 100 kDa) to prepare the virus like particles for the immunization.
[0161] The expression of VLP comprising VLP74 or 78 conjugated with Chikungunya virus structural polypeptide was confirmed by Western Blot using an antibody specific for CHIKV (ATCC: VR-1241AF) and an antibody specific for VLP74 or 78.
Example 2
Preparation of Venezuelan Equine Encephalitis Virus (VEEV) Like Particle Comprising a Virus Structural Polypeptide and a Fragment of Malaria Antigen
[0162] The same polynucleotides of malaria CSP1 proteins (VLP74 and VLP78) used in EXAMPLE 1 are used. N terminal linker is SGG and C terminal linker is GGS.
[0163] The respective polynucleotides was inserted between the codons encoding Ser at 518-position and Ser at 519-position of SEQ ID Nos.19 or 20 (SEQ ID No.3) to construct a plasmid (hereinafter referred to as VEEV-VLP74 or 78) for expressing Venezuelan equine encephalitis virus like particle where the modified VLP74 or 78 -derived peptide is inserted into E2 of Venezuelan equine encephalitis virus structural polypeptide.
[0164] 293F cells (Lifetechnology) were transfected with the plasmid using PEI (GE Healthcare) or GeneX (ATCC). 4 days after the transfection, the conditioned medium was collected and centrifuged at 3000 rpm for 15 minutes to separate it from cells. The supernatant was filtrated using 0.45 .mu.m filter to obtain virus like particles. The virus like particles were concentrated using TFF column and purified using QXL column (GE Healthcare) to obtain purified virus like particles. When animals were immunized with virus like particles, the purified virus like particles were further concentrated using spin column (Molecular Weight-cutoff: 100 kDa) to prepare the virus like particles for the immunization.
[0165] The expression of VLP comprising VLP 74 or 78 conjugated with Venezuelan equine encephalitis virus structural polypeptide was confirmed by Western Blot using an antibody specific for VEEV and an antibody specific for VLP74 or 78.
Example 3
Immunogenicity in Non-Human Primate (Monkey)
[0166] The monkeys were immunized with x25-CHI (80 ug) at 0 week and x6-VEE (80 ug) at 3 week by intramuscular injection with or without adjuvant (Sigma Adjuvant System, Sigma, S6322). X25-CHI means 25 times malaria CSP repeat amino acid NPNA on CHIKV VLP particle (VLP78_15). X6-VEE means 6 times malaria CSP repeat amino acid NPNA on VEEV VLP particle (VLP74_25). The blood is taken at 2 and 5 weeks after the first immunization.
[0167] 96 well ELISA plate were coated with 50 ng of Recombinant Circumsporozoite Protein (rCSP) (Reagent Proteins, ATG-422) in 100 ul PBS buffer pre well. The Plates after 2 hours incubation were washed three times TBS buffer containing 0.05% Tween-20 and blocked with TBS buffer containing 0.05% Tween-20 and 5% dry milk. The heat inactivated diluted serum from monkeys were added in the blocking buffer and incubated for 1 h at room temperature. After washing three times, peroxidase labeled goat anti-human IgG or anti-mouse IgG was added at 1:4000 dilution and incubated for 1 h at room temperature. After washing three times, Peroxidase substrate was added for development and incubated for 10 mins and 2N H2SO4 was added to stop the development. The data were analyzed using Gen5 (BioTek) and GraphPad Prism6 (GraphPad software Inc).
[0168] The Immunogenicities are shown in FIGS. 4 to 6.
[0169] Induction of antibodies against CSP was found in the serum of all monkeys immunized with Malaria VLPs (see FIG. 4). The mean OD values indicating titer of antibodies against CSP is shown in FIG. 5. FIG. 5 shows that the serum from immunized monkeys induced high titer of antibodies against CSP.
[0170] As seen in FIG. 6, higher titer of antibodies against CSP was achieved when CHIKV VLP particle comprising NPNA and VEEV VLP particle comprising NPNA were used for the priming immunization and boosting immunization, respectively, compared to when only CHIKV VLP particle comprising NPNA was used for both of the priming immunization and the boosting immunization. In addition, FIG. 6 shows that use of adjuvant further enhanced the titer of antibodies against CSP. Further, FIG. 6 shows that administration of 25-repeats of NPNA induces higher titer of antibodies against CSP compared to administration of 6-repeats of NPNA.
[0171] The anti-Pf CSP antibody titer in the serum from the monkeys immunized with x25-CHI (80 ug) at 0 week and x6-VEE (80 ug) at 3 week without using adjuvant was measured by ELISA at Malaria Serology Lab Malaria Vaccine Branch, WRAIR. In the ELISA performed at Malaria Serology Lab Malaria Vaccine Branch, WRAIR, the plates were coated with CSPrp ((NPNA)6 Peptide) [0.2 .mu.g/.mu.L] (Supplier: Eurogentec EP070034) and Goat .alpha.-Human IgG (KPL/074-1002 LOT #120714) was used as 2nd antibody. The final titer was determined by the dilution factor that yields an OD of 1.0 (414 nm).
[0172] As a result, the anti-Pf CSP antibody titer in the serum from the monkeys was enhanced after 2nd immunization compared to 1st immunization (see Table 2). Compared to the anti-Pf CSP antibody titer in the serum from the monkeys immunized with RTS,S (GlaxoSmithKline), the anti-Pf CSP antibody titer in the serum from the monkeys immunized with x25-CHI (80 ug) and x6-VEE (80 ug) in the absence of adjuvant was considered to be higher even though RTS,S (GlaxoSmithKline) contains adjuvant.
TABLE-US-00012 TABLE 2 After 1st After 2nd immunization immunization Animal No. Week 2 Week 5 1 8990 29420 2 48210 44100 3 80400 51230 4 16260 19640 Geometric mean 27359 33801
Example 4
Immunogenicity in Mouse
[0173] The mice immunized with 10 ug of VLP78_15 at week 0, 10 ug of VLP74_25 at week 3 and 10 ug of VLP78_15 at week 6 with or without adjuvant (Sigma Adjuvant System, Sigma, S6322) by intramuscular injection.
[0174] The anti-Pf CSP antibody titer in the serum from the immunized mice were measured by ELISA at Malaria Serology Lab Malaria Vaccine Branch, WRAIR, where plates were coated with CSPrp ((NPNA)6 Peptide) [0.2 .mu.g/.mu.L] (Supplier: Eurogentec EP070034) and Goat .alpha.-Mouse IgG (KPL/074-1806 LOT #100737) is used as 2nd antibody to detect the antibodies in the serum.
[0175] The final titer was determined by the dilution factor that yields an OD of 1.0 (414 nm).
[0176] The Immunogenicity are shown in Tables 3 and 4.
[0177] Tables 3 and 4 show that higher titer of antibodies against CSP was achieved after immunizing virus like particle three times. In addition, Tables 3 and 4 show that use of adjuvant enhanced the titer of antibodies against CSP.
TABLE-US-00013 TABLE 3 Mouse Week 3 (after 1.sup.st immunization) Mouse No. VLP VLP + Adjuvant 1 6070 QNS 2 5850 13680 3 9610 7610 4 5440 23370 5 16320 27390 Geometric Mean 7875 16066 QNS = Quantity not sufficient to test
TABLE-US-00014 TABLE 4 Mouse Week 9 (after 1st immunization) Mouse No. VLP VLP + Adjuvant 1 35510 729000 2 15040 197800 3 41650 106700 4 37250 436000 5 48200 497600 Geometric Mean 33134 319666
Example 5
Immunogenicity of P. yoelii CSP Inserted VLP in Mice
[0178] QGPGAP seen in the rodent malaria CSP (P. yoelii CSP) was used as an antigen. 6.times.QGPGAP was inserted into CHIKV VLP. The mice were immunized with the CHIKV VLP 2 times at 0 and 8 week (20 ug VLP per mouse) by intramuscle injection with or without Adjuvant Ribi.
[0179] Immunogenicity was confirmed at 4, 6, 10 and 14 weeks after the first immunization. The anti-P. yoelii CSP antibody were measured by ELISA. The ELISA was performed in the same way as ELISA described in Example 3 except that the plates were coated with P. Yoelii CSP repeat sequence peptide at 0.1 ng/.mu.l. The secondary antibody was anti-mouse IgG HRP (Cell signal, #7076S). The results are shown in FIGS. 7-9.
[0180] FIGS. 7-9 show that higher titer of antibodies against CSP was achieved by intramuscler administration of CHIKV VLP comprising 6.times.QGPGAP. In addition, FIGS. 7-9 show that use of adjuvant enhanced the titer of antibodies against CSP.
Example 6
Protection of Mice Against Malaria by Intramuscle Injection of CHIKV VLP Comprising P. yoelii CSP Epitope: 6.times.QGPGAP
[0181] 6.times.QGPGAP was inserted into CHIKV VLP. The mice (n=5) were immunized with the CHIKV VLP 2 times at 0 and 8 week (20 ug VLP per mouse) by intramuscle injection with or without Adjuvant Ribi (see FIG. 10). Rodent malaria: P. yoelii-challenge (i.v.) was conducted at 17 weeks (see FIG. 10).
[0182] Malaria infection was confirmed by PCR. Genomic DNA was purified from the mice blood day 6 after challenge. 18S malaria DNA was amplified by PCR. FIG. 11 shows results of the PCR, indicating that all of 5 control mice (PBS injection) were infected with malaria; all of 5 mice immunized with Control VLP were infected with malaria; among 5 mice immunized with CHIKV VLP comprising 6.times.QGPGAP, 2 mice were infected with malaria and 3 mice were not infected with malaria; and among 5 mice immunized with CHIKV VLP comprising 6.times.QGPGAP with adjuvant: Ribi, 1 mouse was infected with malaria and 4 mice were not infected with malaria.
Example 7
Preparation of Vaccine Composition Comprising Chikungunya Virus (CHIKV) Like Particle Comprising NPNA Repeat or Venezuelan Equine Encephalitis Virus (VEEV) Like Particle Comprising NPNA Repeat
[0183] Chikungunya virus (CHIKV) like particle comprising 6.times. or 25.times.NPNA was prepared according to Example 1, and Venezuelan equine encephalitis virus (VEEV) like particle comprising 6.times.NPNA was prepared according to Example 2. To prepare a vaccine composition, 80 .mu.g of each of the prepared particles was mixed with 1 ml of Sucrose Phosphate Solution, pH 7.2, Endotoxin Free (Teknova, SP buffer).
Sequence CWU
1
1
5611248PRTChikungunya virus 1Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn
Arg Arg Tyr Gln Pro1 5 10
15Arg Pro Trp Thr Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro
20 25 30Arg Pro Gln Arg Gln Ala Gly
Gln Leu Ala Gln Leu Ile Ser Ala Val 35 40
45Asn Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg
Asn 50 55 60Arg Lys Asn Lys Lys Gln
Lys Gln Lys Gln Gln Ala Pro Gln Asn Asn65 70
75 80Thr Asn Gln Lys Lys Gln Pro Pro Lys Lys Lys
Pro Ala Gln Lys Lys 85 90
95Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp
100 105 110Cys Ile Phe Glu Val Lys
His Glu Gly Lys Val Thr Gly Tyr Ala Cys 115 120
125Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly
Thr Ile 130 135 140Asp Asn Ala Asp Leu
Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr145 150
155 160Asp Leu Glu Cys Ala Gln Ile Pro Val His
Met Lys Ser Asp Ala Ser 165 170
175Lys Phe Thr His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly
180 185 190Ala Val Gln Tyr Ser
Gly Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly 195
200 205Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn
Lys Gly Arg Val 210 215 220Val Ala Ile
Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu225
230 235 240Ser Val Val Thr Trp Asn Lys
Asp Ile Val Thr Lys Ile Thr Pro Glu 245
250 255Gly Ala Glu Glu Trp Ser Leu Ala Ile Pro Val Met
Cys Leu Leu Ala 260 265 270Asn
Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys Tyr 275
280 285Glu Lys Glu Pro Glu Glu Thr Leu Arg
Met Leu Glu Asp Asn Val Met 290 295
300Arg Pro Gly Tyr Tyr Gln Leu Leu Gln Ala Ser Leu Thr Cys Ser Pro305
310 315 320His Arg Gln Arg
Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala 325
330 335Thr Arg Pro Tyr Leu Ala His Cys Pro Asp
Cys Gly Glu Gly His Ser 340 345
350Cys His Ser Pro Val Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp
355 360 365Gly Thr Leu Lys Ile Gln Val
Ser Leu Gln Ile Gly Ile Lys Thr Asp 370 375
380Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp Asn His Met
Pro385 390 395 400Ala Asp
Ala Glu Arg Ala Gly Leu Phe Val Arg Thr Ser Ala Pro Cys
405 410 415Thr Ile Thr Gly Thr Met Gly
His Phe Ile Leu Ala Arg Cys Pro Lys 420 425
430Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys Ile
Ser His 435 440 445Ser Cys Thr His
Pro Phe His His Asp Pro Pro Val Ile Gly Arg Glu 450
455 460Lys Phe His Ser Arg Pro Gln His Gly Lys Glu Leu
Pro Cys Ser Thr465 470 475
480Tyr Val Gln Ser Thr Ala Ala Thr Thr Glu Glu Ile Glu Val His Met
485 490 495Pro Pro Asp Thr Pro
Asp Arg Thr Leu Met Ser Gln Gln Ser Gly Asn 500
505 510Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr
Lys Cys Asn Cys 515 520 525Gly Gly
Ser Asn Glu Gly Leu Thr Thr Thr Asp Lys Val Ile Asn Asn 530
535 540Cys Lys Val Asp Gln Cys His Ala Ala Val Thr
Asn His Lys Lys Trp545 550 555
560Gln Tyr Asn Ser Pro Leu Val Pro Arg Asn Ala Glu Leu Gly Asp Arg
565 570 575Lys Gly Lys Ile
His Ile Pro Phe Pro Leu Ala Asn Val Thr Cys Arg 580
585 590Val Pro Lys Ala Arg Asn Pro Thr Val Thr Tyr
Gly Lys Asn Gln Val 595 600 605Ile
Met Leu Leu Tyr Pro Asp His Pro Thr Leu Leu Ser Tyr Arg Asn 610
615 620Met Gly Glu Glu Pro Asn Tyr Gln Glu Glu
Trp Val Met His Lys Lys625 630 635
640Glu Val Val Leu Thr Val Pro Thr Glu Gly Leu Glu Val Thr Trp
Gly 645 650 655Asn Asn Glu
Pro Tyr Lys Tyr Trp Pro Gln Leu Ser Thr Asn Gly Thr 660
665 670Ala His Gly His Pro His Glu Ile Ile Leu
Tyr Tyr Tyr Glu Leu Tyr 675 680
685Pro Thr Met Thr Val Val Val Val Ser Val Ala Thr Phe Ile Leu Leu 690
695 700Ser Met Val Gly Met Ala Ala Gly
Met Cys Met Cys Ala Arg Arg Arg705 710
715 720Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly Ala Thr
Val Pro Phe Leu 725 730
735Leu Ser Leu Ile Cys Cys Ile Arg Thr Ala Lys Ala Ala Thr Tyr Gln
740 745 750Glu Ala Ala Ile Tyr Leu
Trp Asn Glu Gln Gln Pro Leu Phe Trp Leu 755 760
765Gln Ala Leu Ile Pro Leu Ala Ala Leu Ile Val Leu Cys Asn
Cys Leu 770 775 780Arg Leu Leu Pro Cys
Cys Cys Lys Thr Leu Ala Phe Leu Ala Val Met785 790
795 800Ser Val Gly Ala His Thr Val Ser Ala Tyr
Glu His Val Thr Val Ile 805 810
815Pro Asn Thr Val Gly Val Pro Tyr Lys Thr Leu Val Asn Arg Pro Gly
820 825 830Tyr Ser Pro Met Val
Leu Glu Met Glu Leu Leu Ser Val Thr Leu Glu 835
840 845Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys Glu Tyr
Lys Thr Val Ile 850 855 860Pro Ser Pro
Tyr Val Lys Cys Cys Gly Thr Ala Glu Cys Lys Asp Lys865
870 875 880Asn Leu Pro Asp Tyr Ser Cys
Lys Val Phe Thr Gly Val Tyr Pro Phe 885
890 895Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp Ala Glu
Asn Thr Gln Leu 900 905 910Ser
Glu Ala His Val Glu Lys Ser Glu Ser Cys Lys Thr Glu Phe Ala 915
920 925Ser Ala Tyr Arg Ala His Thr Ala Ser
Ala Ser Ala Lys Leu Arg Val 930 935
940Leu Tyr Gln Gly Asn Asn Ile Thr Val Thr Ala Tyr Ala Asn Gly Asp945
950 955 960His Ala Val Thr
Val Lys Asp Ala Lys Phe Ile Val Gly Pro Met Ser 965
970 975Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile
Val Val Tyr Lys Gly Asp 980 985
990Val Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg Pro Gly Gln
995 1000 1005Phe Gly Asp Ile Gln Ser
Arg Thr Pro Glu Ser Lys Asp Val Tyr 1010 1015
1020Ala Asn Thr Gln Leu Val Leu Gln Arg Pro Ala Val Gly Thr
Val 1025 1030 1035His Val Pro Tyr Ser
Gln Ala Pro Ser Gly Phe Lys Tyr Trp Leu 1040 1045
1050Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe
Gly Cys 1055 1060 1065Gln Ile Ala Thr
Asn Pro Val Arg Ala Val Asn Cys Ala Val Gly 1070
1075 1080Asn Met Pro Ile Ser Ile Asp Ile Pro Glu Ala
Ala Phe Thr Arg 1085 1090 1095Val Val
Asp Ala Pro Ser Leu Thr Asp Met Ser Cys Glu Val Pro 1100
1105 1110Ala Cys Thr His Ser Ser Asp Phe Gly Gly
Val Ala Ile Ile Lys 1115 1120 1125Tyr
Ala Ala Ser Lys Lys Gly Lys Cys Ala Val His Ser Met Thr 1130
1135 1140Asn Ala Val Thr Ile Arg Glu Ala Glu
Ile Glu Val Glu Gly Asn 1145 1150
1155Ser Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu
1160 1165 1170Phe Arg Val Gln Val Cys
Ser Thr Gln Val His Cys Ala Ala Glu 1175 1180
1185Cys His Pro Pro Lys Asp His Ile Val Asn Tyr Pro Ala Ser
His 1190 1195 1200Thr Thr Leu Gly Val
Gln Asp Ile Ser Ala Thr Ala Met Ser Trp 1205 1210
1215Val Gln Lys Ile Thr Gly Gly Val Gly Leu Val Val Ala
Val Ala 1220 1225 1230Ala Leu Ile Leu
Ile Val Val Leu Cys Val Ser Phe Ser Arg His 1235
1240 124521248PRTChikungunya virus 2Met Glu Phe Ile Pro
Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1 5
10 15Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val
Ile Arg Pro Arg Pro 20 25
30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val
35 40 45Asn Lys Leu Thr Met Arg Ala Val
Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp65
70 75 80Pro Lys Gln Lys Lys
Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys 85
90 95Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met
Lys Ile Glu Asn Asp 100 105
110Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys
115 120 125Leu Val Gly Asp Lys Val Met
Lys Pro Ala His Val Lys Gly Thr Ile 130 135
140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys
Tyr145 150 155 160Asp Leu
Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175Lys Phe Thr His Glu Lys Pro
Glu Gly Tyr Tyr Asn Trp His His Gly 180 185
190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly
Ala Gly 195 200 205Lys Pro Gly Asp
Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala
Arg Thr Ala Leu225 230 235
240Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255Gly Ala Glu Glu Trp
Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr
Pro Cys Cys Tyr 275 280 285Glu Lys
Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala Ser
Leu Thr Cys Ser Pro305 310 315
320His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala
325 330 335Thr Arg Pro Tyr
Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350Cys His Ser Pro Ile Ala Leu Glu Arg Ile Arg
Asn Glu Ala Thr Asp 355 360 365Gly
Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380Asp Ser His Asp Trp Thr Lys Leu Arg Tyr
Met Asp Ser His Thr Pro385 390 395
400Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro
Cys 405 410 415Thr Ile Thr
Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430Gly Glu Thr Leu Thr Val Gly Phe Thr Asp
Ser Arg Lys Ile Ser His 435 440
445Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile Gly Arg Glu 450
455 460Arg Phe His Ser Arg Pro Gln His
Gly Lys Glu Leu Pro Cys Ser Thr465 470
475 480Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu Glu Ile
Glu Val His Met 485 490
495Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn
500 505 510Val Lys Ile Thr Val Asn
Gly Gln Thr Val Arg Tyr Lys Cys Asn Cys 515 520
525Gly Gly Ser Asn Glu Gly Leu Thr Thr Thr Asp Lys Val Ile
Asn Asn 530 535 540Cys Lys Ile Asp Gln
Cys His Ala Ala Val Thr Asn His Lys Asn Trp545 550
555 560Gln Tyr Asn Ser Pro Leu Val Pro Arg Asn
Ala Glu Leu Gly Asp Arg 565 570
575Lys Gly Lys Ile His Ile Pro Phe Pro Leu Ala Asn Val Thr Cys Arg
580 585 590Val Pro Lys Ala Arg
Asn Pro Thr Val Thr Tyr Gly Lys Asn Gln Val 595
600 605Thr Met Leu Leu Tyr Pro Asp His Pro Thr Leu Leu
Ser Tyr Arg Asn 610 615 620Met Gly Gln
Glu Pro Asn Tyr His Glu Glu Trp Val Thr His Lys Lys625
630 635 640Glu Val Thr Leu Thr Val Pro
Thr Glu Gly Leu Glu Val Thr Trp Gly 645
650 655Asn Asn Glu Pro Tyr Lys Tyr Trp Pro Gln Met Ser
Thr Asn Gly Thr 660 665 670Ala
His Gly His Pro His Glu Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr 675
680 685Pro Thr Met Thr Val Val Ile Val Ser
Val Ala Ser Phe Val Leu Leu 690 695
700Ser Met Val Gly Thr Ala Val Gly Met Cys Val Cys Ala Arg Arg Arg705
710 715 720Cys Ile Thr Pro
Tyr Glu Leu Thr Pro Gly Ala Thr Val Pro Phe Leu 725
730 735Leu Ser Leu Leu Cys Cys Val Arg Thr Thr
Lys Ala Ala Thr Tyr Tyr 740 745
750Glu Ala Ala Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp Leu
755 760 765Gln Ala Leu Ile Pro Leu Ala
Ala Leu Ile Val Leu Cys Asn Cys Leu 770 775
780Lys Leu Leu Pro Cys Cys Cys Lys Thr Leu Ala Phe Leu Ala Val
Met785 790 795 800Ser Ile
Gly Ala His Thr Val Ser Ala Tyr Glu His Val Thr Val Ile
805 810 815Pro Asn Thr Val Gly Val Pro
Tyr Lys Thr Leu Val Asn Arg Pro Gly 820 825
830Tyr Ser Pro Met Val Leu Glu Met Glu Leu Gln Ser Val Thr
Leu Glu 835 840 845Pro Thr Leu Ser
Leu Asp Tyr Ile Thr Cys Glu Tyr Lys Thr Val Ile 850
855 860Pro Ser Pro Tyr Val Lys Cys Cys Gly Thr Ala Glu
Cys Lys Asp Lys865 870 875
880Ser Leu Pro Asp Tyr Ser Cys Lys Val Phe Thr Gly Val Tyr Pro Phe
885 890 895Met Trp Gly Gly Ala
Tyr Cys Phe Cys Asp Ala Glu Asn Thr Gln Leu 900
905 910Ser Glu Ala His Val Glu Lys Ser Glu Ser Cys Lys
Thr Glu Phe Ala 915 920 925Ser Ala
Tyr Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val 930
935 940Leu Tyr Gln Gly Asn Asn Ile Thr Val Ala Ala
Tyr Ala Asn Gly Asp945 950 955
960His Ala Val Thr Val Lys Asp Ala Lys Phe Val Val Gly Pro Met Ser
965 970 975Ser Ala Trp Thr
Pro Phe Asp Asn Lys Ile Val Val Tyr Lys Gly Asp 980
985 990Val Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala
Gly Arg Pro Gly Gln 995 1000
1005Phe Gly Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr
1010 1015 1020Ala Asn Thr Gln Leu Val
Leu Gln Arg Pro Ala Ala Gly Thr Val 1025 1030
1035His Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp
Leu 1040 1045 1050Lys Glu Arg Gly Ala
Ser Leu Gln His Thr Ala Pro Phe Gly Cys 1055 1060
1065Gln Ile Ala Thr Asn Pro Val Arg Ala Val Asn Cys Ala
Val Gly 1070 1075 1080Asn Ile Pro Ile
Ser Ile Asp Ile Pro Asp Ala Ala Phe Thr Arg 1085
1090 1095Val Val Asp Ala Pro Ser Val Thr Asp Met Ser
Cys Glu Val Pro 1100 1105 1110Ala Cys
Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys 1115
1120 1125Tyr Thr Ala Ser Lys Lys Gly Lys Cys Ala
Val His Ser Met Thr 1130 1135 1140Asn
Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn 1145
1150 1155Ser Gln Leu Gln Ile Ser Phe Ser Thr
Ala Leu Ala Ser Ala Glu 1160 1165
1170Phe Arg Val Gln Val Cys Ser Thr Gln Val His Cys Ala Ala Ala
1175 1180 1185Cys His Pro Pro Lys Asp
His Ile Val Asn Tyr Pro Ala Ser His 1190 1195
1200Thr Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser
Trp 1205 1210 1215Val Gln Lys Ile Thr
Gly Gly Val Gly Leu Ile Val Ala Val Ala 1220 1225
1230Ala Leu Ile Leu Ile Val Val Leu Cys Val Ser Phe Ser
Arg His 1235 1240
124531255PRTVenesuelan equine encephalitis virus 3Met Phe Pro Phe Gln Pro
Met Tyr Pro Met Gln Pro Met Pro Tyr Arg1 5
10 15Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro
Arg Thr Asp Pro 20 25 30Phe
Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn Leu 35
40 45Thr Phe Lys Gln Arg Arg Asp Ala Pro
Pro Glu Gly Pro Ser Ala Ala 50 55
60Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly65
70 75 80Lys Lys Lys Lys Asn
Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro 85
90 95Asn Pro Lys Ala Gln Asn Gly Asn Lys Lys Lys
Thr Asn Lys Lys Pro 100 105
110Gly Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys Thr Phe
115 120 125Pro Ile Met Leu Glu Gly Lys
Ile Asn Gly Tyr Ala Cys Val Val Gly 130 135
140Gly Lys Leu Phe Arg Pro Met His Val Glu Gly Lys Ile Asp Asn
Asp145 150 155 160Val Leu
Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175Tyr Ala Asp Val Pro Gln Asn
Met Arg Ala Asp Thr Phe Lys Tyr Thr 180 185
190His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala
Val Gln 195 200 205Tyr Glu Asn Gly
Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly Arg
Val Val Ala Ile225 230 235
240Val Leu Gly Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val
245 250 255Met Trp Asn Glu Lys
Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys 260
265 270Glu Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu
Ala Asn Val Thr 275 280 285Phe Pro
Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290
295 300Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn
Pro Gly Tyr Asp Glu305 310 315
320Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr
325 330 335Glu Glu Leu Phe
Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg 340
345 350Cys Ile Arg Cys Ala Val Gly Ser Cys His Ser
Pro Ile Ala Ile Glu 355 360 365Ala
Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg Leu Gln Thr Ser 370
375 380Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn
Leu Lys Gly Arg Thr Met385 390 395
400Arg Tyr Asp Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln
Val 405 410 415Ser Leu Tyr
Thr Ser Arg Pro Cys His Ile Val Asp Gly His Gly Tyr 420
425 430Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp
Ser Ile Thr Met Glu Phe 435 440
445Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460Phe Asn Pro Val Gly Arg Glu Leu
Tyr Thr His Pro Pro Glu His Gly465 470
475 480Val Glu Gln Ala Cys Gln Val Tyr Ala His Asp Ala
Gln Asn Arg Gly 485 490
495Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val Asp Ser Ser Leu
500 505 510Val Ser Leu Ser Gly Ser
Ser Val Thr Val Thr Pro Pro Asp Gly Thr 515 520
525Ser Ala Leu Val Glu Cys Glu Cys Gly Gly Thr Lys Ile Ser
Glu Thr 530 535 540Ile Asn Lys Thr Lys
Gln Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys545 550
555 560Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp
Val Tyr Asn Ser Asp Lys 565 570
575Leu Pro Lys Ala Ala Gly Ala Thr Leu Lys Gly Lys Leu His Val Pro
580 585 590Phe Leu Leu Ala Asp
Gly Lys Cys Thr Val Pro Leu Ala Pro Glu Pro 595
600 605Met Ile Thr Phe Gly Phe Arg Ser Val Ser Leu Lys
Leu His Pro Lys 610 615 620Asn Pro Thr
Tyr Leu Ile Thr Arg Gln Leu Ala Asp Glu Pro His Tyr625
630 635 640Thr His Glu Leu Ile Ser Glu
Pro Ala Val Arg Asn Phe Thr Val Thr 645
650 655Glu Lys Gly Trp Glu Phe Val Trp Gly Asn His Pro
Pro Lys Arg Phe 660 665 670Trp
Ala Gln Glu Thr Ala Pro Gly Asn Pro His Gly Leu Pro His Glu 675
680 685Val Ile Thr His Tyr Tyr His Arg Tyr
Pro Met Ser Thr Ile Leu Gly 690 695
700Leu Ser Ile Cys Ala Ala Ile Ala Thr Val Ser Val Ala Ala Ser Thr705
710 715 720Trp Leu Phe Cys
Arg Ser Arg Val Ala Cys Leu Thr Pro Tyr Arg Leu 725
730 735Thr Pro Asn Ala Arg Ile Pro Phe Cys Leu
Ala Val Leu Cys Cys Ala 740 745
750Arg Thr Ala Arg Ala Glu Thr Thr Trp Glu Ser Leu Asp His Leu Trp
755 760 765Asn Asn Asn Gln Gln Met Phe
Trp Ile Gln Leu Leu Ile Pro Leu Ala 770 775
780Ala Leu Ile Val Val Thr Arg Leu Leu Arg Cys Val Cys Cys Val
Val785 790 795 800Pro Phe
Leu Val Met Ala Gly Ala Ala Gly Ala Gly Ala Tyr Glu His
805 810 815Ala Thr Thr Met Pro Ser Gln
Ala Gly Ile Ser Tyr Asn Thr Ile Val 820 825
830Asn Arg Ala Gly Tyr Ala Pro Leu Pro Ile Ser Ile Thr Pro
Thr Lys 835 840 845Ile Lys Leu Ile
Pro Thr Val Asn Leu Glu Tyr Val Thr Cys His Tyr 850
855 860Lys Thr Gly Met Asp Ser Pro Ala Ile Lys Cys Cys
Gly Ser Gln Glu865 870 875
880Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys Lys Val Phe Thr Gly
885 890 895Val Tyr Pro Phe Met
Trp Gly Gly Ala Tyr Cys Phe Cys Asp Thr Glu 900
905 910Asn Thr Gln Val Ser Lys Ala Tyr Val Met Lys Ser
Asp Asp Cys Leu 915 920 925Ala Asp
His Ala Glu Ala Tyr Lys Ala His Thr Ala Ser Val Gln Ala 930
935 940Phe Leu Asn Ile Thr Val Gly Glu His Ser Ile
Val Thr Thr Val Tyr945 950 955
960Val Asn Gly Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr Ala
965 970 975Gly Pro Leu Ser
Thr Ala Trp Thr Pro Phe Asp Arg Lys Ile Val Gln 980
985 990Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro
Glu Tyr Gly Ala Gly 995 1000
1005Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg Thr Val Ser Ser
1010 1015 1020Ser Asp Leu Tyr Ala Asn
Thr Asn Leu Val Leu Gln Arg Pro Lys 1025 1030
1035Ala Gly Ala Ile His Val Pro Tyr Thr Gln Ala Pro Ser Gly
Phe 1040 1045 1050Glu Gln Trp Lys Lys
Asp Lys Ala Pro Ser Leu Lys Phe Thr Ala 1055 1060
1065Pro Phe Gly Cys Glu Ile Tyr Thr Asn Pro Ile Arg Ala
Glu Asn 1070 1075 1080Cys Ala Val Gly
Ser Ile Pro Leu Ala Phe Asp Ile Pro Asp Ala 1085
1090 1095Leu Phe Thr Arg Val Ser Glu Thr Pro Thr Leu
Ser Ala Ala Glu 1100 1105 1110Cys Thr
Leu Asn Glu Cys Val Tyr Ser Ser Asp Phe Gly Gly Ile 1115
1120 1125Ala Thr Val Lys Tyr Ser Ala Ser Lys Ser
Gly Lys Cys Ala Val 1130 1135 1140His
Val Pro Ser Gly Thr Ala Thr Leu Lys Glu Ala Ala Val Glu 1145
1150 1155Leu Thr Glu Gln Gly Ser Ala Thr Ile
His Phe Ser Thr Ala Asn 1160 1165
1170Ile His Pro Glu Phe Arg Leu Gln Ile Cys Thr Ser Tyr Val Thr
1175 1180 1185Cys Lys Gly Asp Cys His
Pro Pro Lys Asp His Ile Val Thr His 1190 1195
1200Pro Gln Tyr His Ala Gln Thr Phe Thr Ala Ala Val Ser Lys
Thr 1205 1210 1215Ala Trp Thr Trp Leu
Thr Ser Leu Leu Gly Gly Ser Ala Val Ile 1220 1225
1230Ile Ile Ile Gly Leu Val Leu Ala Thr Ile Val Ala Met
Tyr Val 1235 1240 1245Leu Thr Asn Gln
Lys His Asn 1250 125542964DNAChikungunya virus
4atgagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
60ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
120gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
180caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
240ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
300cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
360ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
420gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
480accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
540acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
600ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
660tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
720cctgaccgca cgctgatgac gcagcagtct ggcaacgtga agatcacagt taatgggcag
780acggtgcggt acaagtgcaa ctgcggtggc tcaaacgagg gactgacaac cacagacaaa
840gtgatcaata actgcaaaat tgatcagtgc catgctgcag tcactaatca caagaattgg
900caatacaact cccctttagt cccgcgcaac gctgaactcg gggaccgtaa aggaaagatc
960cacatcccat tcccattggc aaacgtgact tgcagagtgc caaaagcaag aaaccctaca
1020gtaacttacg gaaaaaacca agtcaccatg ctgctgtatc ctgaccatcc gacactcttg
1080tcttaccgta acatgggaca ggaaccaaat taccacgagg agtgggtgac acacaagaag
1140gaggttacct tgaccgtgcc tactgagggt ctggaggtca cttggggcaa caacgaacca
1200tacaagtact ggccgcagat gtctacgaac ggtactgctc atggtcaccc acatgagata
1260atcttgtact attatgagct gtaccccact atgactgtag tcattgtgtc ggtggcctcg
1320ttcgtgcttc tgtcgatggt gggcacagca gtgggaatgt gtgtgtgcgc acggcgcaga
1380tgcattacac catatgaatt aacaccagga gccactgttc ccttcctgct cagcctgcta
1440tgctgcgtca gaacgaccaa ggcggccaca tattacgagg ctgcggcata tctatggaac
1500gaacagcagc ccctgttctg gttgcaggct cttatcccgc tggccgcctt gatcgtcctg
1560tgcaactgtc tgaaactctt gccatgctgc tgtaagaccc tggctttttt agccgtaatg
1620agcatcggtg cccacactgt gagcgcgtac gaacacgtaa cagtgatccc gaacacggtg
1680ggagtaccgt ataagactct tgtcaacaga ccgggttaca gccccatggt gttggagatg
1740gagctacaat cagtcacctt ggaaccaaca ctgtcacttg actacatcac gtgcgagtac
1800aaaactgtca tcccctcccc gtacgtgaag tgctgtggta cagcagagtg caaggacaag
1860agcctaccag actacagctg caaggtcttt actggagtct acccatttat gtggggcggc
1920gcctactgct tttgcgacgc cgaaaatacg caattgagcg aggcacatgt agagaaatct
1980gaatcttgca aaacagagtt tgcatcggcc tacagagccc acaccgcatc ggcgtcggcg
2040aagctccgcg tcctttacca aggaaacaac attaccgtag ctgcctacgc taacggtgac
2100catgccgtca cagtaaagga cgccaagttt gtcgtgggcc caatgtcctc cgcctggaca
2160ccttttgaca acaaaatcgt ggtgtacaaa ggcgacgtct acaacatgga ctacccacct
2220tttggcgcag gaagaccagg acaatttggt gacattcaaa gtcgtacacc ggaaagtaaa
2280gacgtttatg ccaacactca gttggtacta cagaggccag cagcaggcac ggtacatgta
2340ccatactctc aggcaccatc tggcttcaag tattggctga aggaacgagg agcatcgcta
2400cagcacacgg caccgttcgg ttgccagatt gcgacaaacc cggtaagagc tgtaaattgc
2460gctgtgggga acataccaat ttccatcgac ataccggatg cggcctttac tagggttgtc
2520gatgcaccct ctgtaacgga catgtcatgc gaagtaccag cctgcactca ctcctccgac
2580tttgggggcg tcgccatcat caaatacaca gctagcaaga aaggtaaatg tgcagtacat
2640tcgatgacca acgccgttac cattcgagaa gccgacgtag aagtagaggg gaactcccag
2700ctgcaaatat ccttctcaac agccctggca agcgccgagt ttcgcgtgca agtgtgctcc
2760acacaagtac actgcgcagc cgcatgccac cctccaaagg accacatagt caattaccca
2820gcatcacaca ccacccttgg ggtccaggat atatccacaa cggcaatgtc ttgggtgcag
2880aagattacgg gaggagtagg attaattgtt gctgttgctg ccttaatttt aattgtggtg
2940ctatgcgtgt cgtttagcag gcac
296452964DNAChikungunya virus 5atgagtcttg ccatcccagt tatgtgcctg
ttggcaaaca ccacgttccc ctgctcccag 60cccccttgca cgccctgctg ctacgaaaag
gaaccggagg aaaccctacg catgcttgag 120gacaacgtca tgagacctgg gtactatcag
ctgctacaag catccttaac atgttctccc 180caccgccagc gacgcagcac caaggacaac
ttcaatgtct ataaagccac aagaccatac 240ttagctcact gtcccgactg tggagaaggg
cactcgtgcc atagtcccgt agcactagaa 300cgcatcagaa atgaagcgac agacgggacg
ctgaaaatcc aggtctcctt gcaaatcgga 360ataaagacgg atgacagcca cgattggacc
aagctgcgtt atatggacaa ccacatgcca 420gcagacgcag agagggcggg gctatttgta
agaacatcag caccgtgtac gattactgga 480acaatgggac acttcatcct ggcccgatgt
ccaaaagggg aaactctgac ggtgggattc 540actgacagta ggaagattag tcactcatgt
acgcacccat ttcaccacga ccctcctgtg 600ataggtcggg aaaaattcca ttcccgaccg
cagcacggta aagagctacc ttgcagcacg 660tacgtgcaga gcaccgccgc aactaccgag
gagatagagg tacacatgcc cccagacacc 720cctgatcgca cattaatgtc acaacagtcc
ggcaacgtaa agatcacagt caatggccag 780acggtgcggt acaagtgtaa ttgcggtggc
tcaaatgaag gactaacaac tacagacaaa 840gtgattaata actgcaaggt tgatcaatgt
catgccgcgg tcaccaatca caaaaagtgg 900cagtataact cccctctggt cccgcgtaat
gctgaacttg gggaccgaaa aggaaaaatt 960cacatcccgt ttccgctggc aaatgtaaca
tgcagggtgc ctaaagcaag gaaccccacc 1020gtgacgtacg ggaaaaacca agtcatcatg
ctactgtatc ctgaccaccc aacactcctg 1080tcctaccgga atatgggaga agaaccaaac
tatcaagaag agtgggtgat gcataagaag 1140gaagtcgtgc taaccgtgcc gactgaaggg
ctcgaggtca cgtggggcaa caacgagccg 1200tataagtatt ggccgcagtt atctacaaac
ggtacagccc atggccaccc gcatgagata 1260attctgtatt attatgagct gtaccccact
atgactgtag tagttgtgtc agtggccacg 1320ttcatactcc tgtcgatggt gggtatggca
gcggggatgt gcatgtgtgc acgacgcaga 1380tgcatcacac cgtatgaact gacaccagga
gctaccgtcc ctttcctgct tagcctaata 1440tgctgcatca gaacagctaa agcggccaca
taccaagagg ctgcgatata cctgtggaac 1500gagcagcaac ctttgttttg gctacaagcc
cttattccgc tggcagccct gattgttcta 1560tgcaactgtc tgagactctt accatgctgc
tgtaaaacgt tggctttttt agccgtaatg 1620agcgtcggtg cccacactgt gagcgcgtac
gaacacgtaa cagtgatccc gaacacggtg 1680ggagtaccgt ataagactct agtcaataga
cctggctaca gccccatggt attggagatg 1740gaactactgt cagtcacttt ggagccaaca
ctatcgcttg attacatcac gtgcgagtac 1800aaaaccgtca tcccgtctcc gtacgtgaag
tgctgcggta cagcagagtg caaggacaaa 1860aacctacctg actacagctg taaggtcttc
accggcgtct acccatttat gtggggcggc 1920gcctactgct tctgcgacgc tgaaaacacg
cagttgagcg aagcacacgt ggagaagtcc 1980gaatcatgca aaacagaatt tgcatcagca
tacagggctc ataccgcatc tgcatcagct 2040aagctccgcg tcctttacca aggaaataac
atcactgtaa ctgcctatgc aaacggcgac 2100catgccgtca cagttaagga cgccaaattc
attgtggggc caatgtcttc agcctggaca 2160cctttcgaca acaaaattgt ggtgtacaaa
ggtgacgtct ataacatgga ctacccgccc 2220tttggcgcag gaagaccagg acaatttggc
gatatccaaa gtcgcacacc tgagagtaaa 2280gacgtctatg ctaatacaca actggtactg
cagagaccgg ctgtgggtac ggtacacgtg 2340ccatactctc aggcaccatc tggctttaag
tattggctaa aagaacgcgg ggcgtcgctg 2400cagcacacag caccatttgg ctgccaaata
gcaacaaacc cggtaagagc ggtgaactgc 2460gccgtaggga acatgcccat ctccatcgac
ataccggaag cggccttcac tagggtcgtc 2520gacgcgccct ctttaacgga catgtcgtgc
gaggtaccag cctgcaccca ttcctcagac 2580tttgggggcg tcgccattat taaatatgca
gccagcaaga aaggcaagtg tgcggtgcat 2640tcgatgacta acgccgtcac tattcgggaa
gctgagatag aagttgaagg gaattctcag 2700ctgcaaatct ctttctcgac ggccttagcc
agcgccgaat tccgcgtaca agtctgttct 2760acacaagtac actgtgcagc cgagtgccac
cccccgaagg accacatagt caactacccg 2820gcgtcacata ccaccctcgg ggtccaggac
atctccgcta cggcgatgtc atgggtgcag 2880aagatcacgg gaggtgtggg actggttgtt
gctgttgccg cactgattct aatcgtggtg 2940ctatgcgtgt cgttcagcag gcac
296463747DNAChikungunya virus
6atggagttca tcccgacgca aactttctat aacagaaggt accaaccccg accctgggcc
60ccacgcccta caattcaagt aattagacct agaccacgtc cacagaggca ggctgggcaa
120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag
180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac
240ccaaagcaaa agaagcaacc accacaaaag aagccggctc aaaagaagaa gaaaccaggc
300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt caagcatgaa
360ggcaaagtga tgggctacgc atgcctggtg ggggataaag taatgaaacc agcacatgtg
420aagggaacta tcgacaatgc cgatctggct aaactggcct ttaagcggtc gtctaaatac
480gatcttgaat gtgcacagat accggtgcac atgaagtctg atgcctcgaa gtttacccac
540gagaaacccg aggggtacta taactggcat cacggagcag tgcagtattc aggaggccgg
600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg gcagaccgat cttcgacaac
660aaaggacggg tggtggccat cgtcctagga ggggccaacg aaggtgcccg cacggccctc
720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta cccctgaggg agccgaagag
780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
900gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
960caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
1140ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
1200gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
1260accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
1320acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
1380ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
1500cctgaccgca cgctgatgac gcagcagtct ggcaacgtga agatcacagt taatgggcag
1560acggtgcggt acaagtgcaa ctgcggtggc tcaaacgagg gactgacaac cacagacaaa
1620gtgatcaata actgcaaaat tgatcagtgc catgctgcag tcactaatca caagaattgg
1680caatacaact cccctttagt cccgcgcaac gctgaactcg gggaccgtaa aggaaagatc
1740cacatcccat tcccattggc aaacgtgact tgcagagtgc caaaagcaag aaaccctaca
1800gtaacttacg gaaaaaacca agtcaccatg ctgctgtatc ctgaccatcc gacactcttg
1860tcttaccgta acatgggaca ggaaccaaat taccacgagg agtgggtgac acacaagaag
1920gaggttacct tgaccgtgcc tactgagggt ctggaggtca cttggggcaa caacgaacca
1980tacaagtact ggccgcagat gtctacgaac ggtactgctc atggtcaccc acatgagata
2040atcttgtact attatgagct gtaccccact atgactgtag tcattgtgtc ggtggcctcg
2100ttcgtgcttc tgtcgatggt gggcacagca gtgggaatgt gtgtgtgcgc acggcgcaga
2160tgcattacac catatgaatt aacaccagga gccactgttc ccttcctgct cagcctgcta
2220tgctgcgtca gaacgaccaa ggcggccaca tattacgagg ctgcggcata tctatggaac
2280gaacagcagc ccctgttctg gttgcaggct cttatcccgc tggccgcctt gatcgtcctg
2340tgcaactgtc tgaaactctt gccatgctgc tgtaagaccc tggctttttt agccgtaatg
2400agcatcggtg cccacactgt gagcgcgtac gaacacgtaa cagtgatccc gaacacggtg
2460ggagtaccgt ataagactct tgtcaacaga ccgggttaca gccccatggt gttggagatg
2520gagctacaat cagtcacctt ggaaccaaca ctgtcacttg actacatcac gtgcgagtac
2580aaaactgtca tcccctcccc gtacgtgaag tgctgtggta cagcagagtg caaggacaag
2640agcctaccag actacagctg caaggtcttt actggagtct acccatttat gtggggcggc
2700gcctactgct tttgcgacgc cgaaaatacg caattgagcg aggcacatgt agagaaatct
2760gaatcttgca aaacagagtt tgcatcggcc tacagagccc acaccgcatc ggcgtcggcg
2820aagctccgcg tcctttacca aggaaacaac attaccgtag ctgcctacgc taacggtgac
2880catgccgtca cagtaaagga cgccaagttt gtcgtgggcc caatgtcctc cgcctggaca
2940ccttttgaca acaaaatcgt ggtgtacaaa ggcgacgtct acaacatgga ctacccacct
3000tttggcgcag gaagaccagg acaatttggt gacattcaaa gtcgtacacc ggaaagtaaa
3060gacgtttatg ccaacactca gttggtacta cagaggccag cagcaggcac ggtacatgta
3120ccatactctc aggcaccatc tggcttcaag tattggctga aggaacgagg agcatcgcta
3180cagcacacgg caccgttcgg ttgccagatt gcgacaaacc cggtaagagc tgtaaattgc
3240gctgtgggga acataccaat ttccatcgac ataccggatg cggcctttac tagggttgtc
3300gatgcaccct ctgtaacgga catgtcatgc gaagtaccag cctgcactca ctcctccgac
3360tttgggggcg tcgccatcat caaatacaca gctagcaaga aaggtaaatg tgcagtacat
3420tcgatgacca acgccgttac cattcgagaa gccgacgtag aagtagaggg gaactcccag
3480ctgcaaatat ccttctcaac agccctggca agcgccgagt ttcgcgtgca agtgtgctcc
3540acacaagtac actgcgcagc cgcatgccac cctccaaagg accacatagt caattaccca
3600gcatcacaca ccacccttgg ggtccaggat atatccacaa cggcaatgtc ttgggtgcag
3660aagattacgg gaggagtagg attaattgtt gctgttgctg ccttaatttt aattgtggtg
3720ctatgcgtgt cgtttagcag gcactaa
374773747DNAChikungunya virus 7atggagttca tcccaaccca aactttttac
aataggaggt accagcctcg accctggact 60ccgcgcccta ctatccaagt catcaggccc
agaccgcgcc ctcagaggca agctgggcaa 120cttgcccagc tgatctcagc agttaataaa
ctgacaatgc gcgcggtacc acaacagaag 180ccacgcagga atcggaagaa taagaagcaa
aagcaaaaac aacaggcgcc acaaaacaac 240acaaatcaaa agaagcagcc acctaaaaag
aaaccggctc aaaagaaaaa gaagccgggc 300cgcagagaga ggatgtgcat gaaaatcgaa
aatgattgta ttttcgaagt caagcacgaa 360ggtaaggtaa caggttacgc gtgcctggtg
ggggacaaag taatgaaacc agcacacgta 420aaggggacca tcgataacgc ggacctggcc
aaactggcct ttaagcggtc atctaagtat 480gaccttgaat gcgcgcagat acccgtgcac
atgaagtccg acgcttcgaa gttcacccat 540gagaaaccgg aggggtacta caactggcac
cacggagcag tacagtactc aggaggccgg 600ttcaccatcc ctacaggtgc tggcaaacca
ggggacagcg gcagaccgat cttcgacaac 660aagggacgcg tggtggccat agtcttagga
ggagctaatg aaggagcccg tacagccctc 720tcggtggtga cctggaataa agacattgtc
actaaaatca cccccgaggg ggccgaagag 780tggagtcttg ccatcccagt tatgtgcctg
ttggcaaaca ccacgttccc ctgctcccag 840cccccttgca cgccctgctg ctacgaaaag
gaaccggagg aaaccctacg catgcttgag 900gacaacgtca tgagacctgg gtactatcag
ctgctacaag catccttaac atgttctccc 960caccgccagc gacgcagcac caaggacaac
ttcaatgtct ataaagccac aagaccatac 1020ttagctcact gtcccgactg tggagaaggg
cactcgtgcc atagtcccgt agcactagaa 1080cgcatcagaa atgaagcgac agacgggacg
ctgaaaatcc aggtctcctt gcaaatcgga 1140ataaagacgg atgacagcca cgattggacc
aagctgcgtt atatggacaa ccacatgcca 1200gcagacgcag agagggcggg gctatttgta
agaacatcag caccgtgtac gattactgga 1260acaatgggac acttcatcct ggcccgatgt
ccaaaagggg aaactctgac ggtgggattc 1320actgacagta ggaagattag tcactcatgt
acgcacccat ttcaccacga ccctcctgtg 1380ataggtcggg aaaaattcca ttcccgaccg
cagcacggta aagagctacc ttgcagcacg 1440tacgtgcaga gcaccgccgc aactaccgag
gagatagagg tacacatgcc cccagacacc 1500cctgatcgca cattaatgtc acaacagtcc
ggcaacgtaa agatcacagt caatggccag 1560acggtgcggt acaagtgtaa ttgcggtggc
tcaaatgaag gactaacaac tacagacaaa 1620gtgattaata actgcaaggt tgatcaatgt
catgccgcgg tcaccaatca caaaaagtgg 1680cagtataact cccctctggt cccgcgtaat
gctgaacttg gggaccgaaa aggaaaaatt 1740cacatcccgt ttccgctggc aaatgtaaca
tgcagggtgc ctaaagcaag gaaccccacc 1800gtgacgtacg ggaaaaacca agtcatcatg
ctactgtatc ctgaccaccc aacactcctg 1860tcctaccgga atatgggaga agaaccaaac
tatcaagaag agtgggtgat gcataagaag 1920gaagtcgtgc taaccgtgcc gactgaaggg
ctcgaggtca cgtggggcaa caacgagccg 1980tataagtatt ggccgcagtt atctacaaac
ggtacagccc atggccaccc gcatgagata 2040attctgtatt attatgagct gtaccccact
atgactgtag tagttgtgtc agtggccacg 2100ttcatactcc tgtcgatggt gggtatggca
gcggggatgt gcatgtgtgc acgacgcaga 2160tgcatcacac cgtatgaact gacaccagga
gctaccgtcc ctttcctgct tagcctaata 2220tgctgcatca gaacagctaa agcggccaca
taccaagagg ctgcgatata cctgtggaac 2280gagcagcaac ctttgttttg gctacaagcc
cttattccgc tggcagccct gattgttcta 2340tgcaactgtc tgagactctt accatgctgc
tgtaaaacgt tggctttttt agccgtaatg 2400agcgtcggtg cccacactgt gagcgcgtac
gaacacgtaa cagtgatccc gaacacggtg 2460ggagtaccgt ataagactct agtcaataga
cctggctaca gccccatggt attggagatg 2520gaactactgt cagtcacttt ggagccaaca
ctatcgcttg attacatcac gtgcgagtac 2580aaaaccgtca tcccgtctcc gtacgtgaag
tgctgcggta cagcagagtg caaggacaaa 2640aacctacctg actacagctg taaggtcttc
accggcgtct acccatttat gtggggcggc 2700gcctactgct tctgcgacgc tgaaaacacg
cagttgagcg aagcacacgt ggagaagtcc 2760gaatcatgca aaacagaatt tgcatcagca
tacagggctc ataccgcatc tgcatcagct 2820aagctccgcg tcctttacca aggaaataac
atcactgtaa ctgcctatgc aaacggcgac 2880catgccgtca cagttaagga cgccaaattc
attgtggggc caatgtcttc agcctggaca 2940cctttcgaca acaaaattgt ggtgtacaaa
ggtgacgtct ataacatgga ctacccgccc 3000tttggcgcag gaagaccagg acaatttggc
gatatccaaa gtcgcacacc tgagagtaaa 3060gacgtctatg ctaatacaca actggtactg
cagagaccgg ctgtgggtac ggtacacgtg 3120ccatactctc aggcaccatc tggctttaag
tattggctaa aagaacgcgg ggcgtcgctg 3180cagcacacag caccatttgg ctgccaaata
gcaacaaacc cggtaagagc ggtgaactgc 3240gccgtaggga acatgcccat ctccatcgac
ataccggaag cggccttcac tagggtcgtc 3300gacgcgccct ctttaacgga catgtcgtgc
gaggtaccag cctgcaccca ttcctcagac 3360tttgggggcg tcgccattat taaatatgca
gccagcaaga aaggcaagtg tgcggtgcat 3420tcgatgacta acgccgtcac tattcgggaa
gctgagatag aagttgaagg gaattctcag 3480ctgcaaatct ctttctcgac ggccttagcc
agcgccgaat tccgcgtaca agtctgttct 3540acacaagtac actgtgcagc cgagtgccac
cccccgaagg accacatagt caactacccg 3600gcgtcacata ccaccctcgg ggtccaggac
atctccgcta cggcgatgtc atgggtgcag 3660aagatcacgg gaggtgtggg actggttgtt
gctgttgccg cactgattct aatcgtggtg 3720ctatgcgtgt cgttcagcag gcactaa
374788404DNAArtificial SequenceSynthetic
vector VLP_CHI512 8gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat
tggctcatgt 60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta
atcaattacg 120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac
ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac
gtatgttccc 240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt
acggtaaact 300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat
tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga
ctttcctact 420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt
ttggcagtac 480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca
ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg
tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta
tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt
tgacctccat 720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta
gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac
agactgttcc 840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat
atcgcggccg 900ccaccatgga gttcatcccg acgcaaactt tctataacag aaggtaccaa
ccccgaccct 960gggccccacg ccctacaatt caagtaatta gacctagacc acgtccacag
aggcaggctg 1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac catgcgcgcg
gtacctcaac 1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag
gcgccgcaaa 1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag
aagaagaaac 1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc
gaagtcaagc 1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga taaagtaatg
aaaccagcac 1320atgtgaaggg aactatcgac aatgccgatc tggctaaact ggcctttaag
cggtcgtcta 1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc
tcgaagttta 1440cccacgagaa acccgagggg tactataact ggcatcacgg agcagtgcag
tattcaggag 1500gccggttcac tatcccgacg ggtgcaggca agccgggaga cagcggcaga
ccgatcttcg 1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc caacgaaggt
gcccgcacgg 1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct
gagggagccg 1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc aaacactaca
ttcccctgct 1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc
ttgcgcatgc 1800ttgaggacaa cgtgatgaga cccggatact accagctact aaaagcatcg
ctgacttgct 1860ctccccaccg ccaaagacgc agtactaagg acaattttaa tgtctataaa
gccacaagac 1920catatctagc tcattgtcct gactgcggag aagggcattc gtgccacagc
cctatcgcat 1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc
tctttgcaga 2040tcgggataaa gacagatgac agccacgatt ggaccaagct gcgctatatg
gatagccata 2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac ttcagcaccg
tgcacgatca 2160ccgggaccat gggacacttt attctcgccc gatgcccgaa aggagagacg
ctgacagtgg 2220gatttacgga cagcagaaag atcagccaca catgcacaca cccgttccat
catgaaccac 2280ctgtgatagg tagggagagg ttccactctc gaccacaaca tggtaaagag
ttaccttgca 2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat agaggtgcat
atgcccccag 2400atactcctga ccgcacgctg atgacgcagc agtccggagg atccaacgtg
aagatcacag 2460ttaatgggca gacggtgcgg tacaagtgca actgcggtgg ctcaaacgag
ggactgacaa 2520ccacagacaa agtgatcaat aactgcaaaa ttgatcagtg ccatgctgca
gtcactaatc 2580acaagaattg gcaatacaac tcccctttag tcccgcgcaa cgctgaactc
ggggaccgta 2640aaggaaagat ccacatccca ttcccattgg caaacgtgac ttgcagagtg
ccaaaagcaa 2700gaaaccctac agtaacttac ggaaaaaacc aagtcaccat gctgctgtat
cctgaccatc 2760cgacactctt gtcttaccgt aacatgggac aggaaccaaa ttaccacgag
gagtgggtga 2820cacacaagaa ggaggttacc ttgaccgtgc ctactgaggg tctggaggtc
acttggggca 2880acaacgaacc atacaagtac tggccgcaga tgtctacgaa cggtactgct
catggtcacc 2940cacatgagat aatcttgtac tattatgagc tgtaccccac tatgactgta
gtcattgtgt 3000cggtggcctc gttcgtgctt ctgtcgatgg tgggcacagc agtgggaatg
tgtgtgtgcg 3060cacggcgcag atgcattaca ccatatgaat taacaccagg agccactgtt
cccttcctgc 3120tcagcctgct atgctgcgtc agaacgacca aggcggccac atattacgag
gctgcggcat 3180atctatggaa cgaacagcag cccctgttct ggttgcaggc tcttatcccg
ctggccgcct 3240tgatcgtcct gtgcaactgt ctgaaactct tgccatgctg ctgtaagacc
ctggcttttt 3300tagccgtaat gagcatcggt gcccacactg tgagcgcgta cgaacacgta
acagtgatcc 3360cgaacacggt gggagtaccg tataagactc ttgtcaacag accgggttac
agccccatgg 3420tgttggagat ggagctacaa tcagtcacct tggaaccaac actgtcactt
gactacatca 3480cgtgcgagta caaaactgtc atcccctccc cgtacgtgaa gtgctgtggt
acagcagagt 3540gcaaggacaa gagcctacca gactacagct gcaaggtctt tactggagtc
tacccattta 3600tgtggggcgg cgcctactgc ttttgcgacg ccgaaaatac gcaattgagc
gaggcacatg 3660tagagaaatc tgaatcttgc aaaacagagt ttgcatcggc ctacagagcc
cacaccgcat 3720cggcgtcggc gaagctccgc gtcctttacc aaggaaacaa cattaccgta
gctgcctacg 3780ctaacggtga ccatgccgtc acagtaaagg acgccaagtt tgtcgtgggc
ccaatgtcct 3840ccgcctggac accttttgac aacaaaatcg tggtgtacaa aggcgacgtc
tacaacatgg 3900actacccacc ttttggcgca ggaagaccag gacaatttgg tgacattcaa
agtcgtacac 3960cggaaagtaa agacgtttat gccaacactc agttggtact acagaggcca
gcagcaggca 4020cggtacatgt accatactct caggcaccat ctggcttcaa gtattggctg
aaggaacgag 4080gagcatcgct acagcacacg gcaccgttcg gttgccagat tgcgacaaac
ccggtaagag 4140ctgtaaattg cgctgtgggg aacataccaa tttccatcga cataccggat
gcggccttta 4200ctagggttgt cgatgcaccc tctgtaacgg acatgtcatg cgaagtacca
gcctgcactc 4260actcctccga ctttgggggc gtcgccatca tcaaatacac agctagcaag
aaaggtaaat 4320gtgcagtaca ttcgatgacc aacgccgtta ccattcgaga agccgacgta
gaagtagagg 4380ggaactccca gctgcaaata tccttctcaa cagccctggc aagcgccgag
tttcgcgtgc 4440aagtgtgctc cacacaagta cactgcgcag ccgcatgcca ccctccaaag
gaccacatag 4500tcaattaccc agcatcacac accacccttg gggtccagga tatatccaca
acggcaatgt 4560cttgggtgca gaagattacg ggaggagtag gattaattgt tgctgttgct
gccttaattt 4620taattgtggt gctatgcgtg tcgtttagca ggcactaagg atctagatct
gctgtgcctt 4680ctagttgcca gccatctgtt gtttgcccct cccccgtgcc ttccttgacc
ctggaaggtg 4740ccactcccac tgtcctttcc taataaaatg aggaaattgc atcgcattgt
ctgagtaggt 4800gtcattctat tctggggggt ggggtggggc aggacagcaa gggggaggat
tgggaagaca 4860atagcaggca tgctggggat gcggtgggct ctatgggtac ccaggtgctg
aagaattgac 4920ccggttcctc ctgggccaga aagaagcagg cacatcccct tctctgtgac
acaccctgtc 4980cacgcccctg gttcttagtt ccagccccac tcataggaca ctcatagctc
aggagggctc 5040cgccttcaat cccacccgct aaagtacttg gagcggtctc tccctccctc
atcagcccac 5100caaaccaaac ctagcctcca agagtgggaa gaaattaaag caagataggc
tattaagtgc 5160agagggagag aaaatgcctc caacatgtga ggaagtaatg agagaaatca
tagaatttta 5220aggccatgat ttaaggccat catggcctaa gcttgaaagg agataggatc
aaagcttggc 5280gtaatcatgg tcatagctgt ttcctgtgtg aaattgttat ccgctcacaa
ttccacacaa 5340catacgagcc ggaagcataa agtgtaaagc ctggggtgcc taatgagtga
gctaactcac 5400attaattgcg ttgcgctcac tgcccgcttt ccagtcggga aacctgtcgt
gccagctgca 5460ttaatgaatc ggccaacgcg cggggagagg cggtttgcgt attgggcgct
cttccgcttc 5520ctcgctcact gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat
cagctcactc 5580aaaggcggta atacggttat ccacagaatc aggggataac gcaggaaaga
acatgtgagc 5640aaaaggccag caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt
ttttccatag 5700gctccgcccc cctgacgagc atcacaaaaa tcgacgctca agtcagaggt
ggcgaaaccc 5760gacaggacta taaagatacc aggcgtttcc ccctggaagc tccctcgtgc
gctctcctgt 5820tccgaccctg ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa
gcgtggcgct 5880ttctcatagc tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct
ccaagctggg 5940ctgtgtgcac gaaccccccg ttcagcccga ccgctgcgcc ttatccggta
actatcgtct 6000tgagtccaac ccggtaagac acgacttatc gccactggca gcagccactg
gtaacaggat 6060tagcagagcg aggtatgtag gcggtgctac agagttcttg aagtggtggc
ctaactacgg 6120ctacactaga agaacagtat ttggtatctg cgctctgctg aagccagtta
ccttcggaaa 6180aagagttggt agctcttgat ccggcaaaca aaccaccgct ggtagcggtg
gtttttttgt 6240ttgcaagcag cagattacgc gcagaaaaaa aggatctcaa gaagatcctt
tgatcttttc 6300tacggggtct gacgctcagt ggaacgaaaa ctcacgttaa gggattttgg
tcatgagatt 6360atcaaaaagg atcttcacct agatcctttt aaattaaaaa tgaagtttta
aatcaatcta 6420aagtatatat gagtaaactt ggtctgacag ttaccaatgc ttaatcagtg
aggcacctat 6480ctcagcgatc tgtctatttc gttcatccat agttgcctga ctccccgtcg
tgtagataac 6540tacgatacgg gagggcttac catctggccc cagtgctgca atgataccgc
gagaaccacg 6600ctcaccggct ccagatttat cagcaataaa ccagccagcc ggaagggccg
agcgcagaag 6660tggtcctgca actttatccg cctccatcca gtctattaat tgttgccggg
aagctagagt 6720aagtagttcg ccagttaata gtttgcgcaa cgttgttgcc attgctacag
gcatcgtggt 6780gtcacgctcg tcgtttggta tggcttcatt cagctccggt tcccaacgat
caaggcgagt 6840tacatgatcc cccatgttgt gcaaaaaagc ggttagctcc ttcggtcctc
cgatcgttgt 6900cagaagtaag ttggccgcag tgttatcact catggttatg gcagcactgc
ataattctct 6960tactgtcatg ccatccgtaa gatgcttttc tgtgactggt gagtactcaa
ccaagtcatt 7020ctgagaatag tgtatgcggc gaccgagttg ctcttgcccg gcgtcaatac
gggataatac 7080cgcgccacat agcagaactt taaaagtgct catcattgga aaacgttctt
cggggcgaaa 7140actctcaagg atcttaccgc tgttgagatc cagttcgatg taacccactc
gtgcacccaa 7200ctgatcttca gcatctttta ctttcaccag cgtttctggg tgagcaaaaa
caggaaggca 7260aaatgccgca aaaaagggaa taagggcgac acggaaatgt tgaatactca
tactcttcct 7320ttttcaatat tattgaagca tttatcaggg ttattgtctc atgagcggat
acatatttga 7380atgtatttag aaaaataaac aaataggggt tccgcgcaca tttccccgaa
aagtgccacc 7440tgacgtctaa gaaaccatta ttatcatgac attaacctat aaaaataggc
gtatcacgag 7500gccctttcgg gtcgcgcgtt tcggtgatga cggtgaaaac ctctgacaca
tgcagctccc 7560gttgacggtc acagcttgtc tgtaagcgga tgccgggagc agacaagccc
gtcagggcgc 7620gtcagcgggt gttggcgggt gtcggggctg gcttaactat gcggcatcag
agcagattgt 7680actgagagtg caccataaaa ttgtaaacgt taatattttg ttaaaattcg
cgttaaattt 7740ttgttaaatc agctcatttt ttaaccaata ggccgaaatc ggcaaaatcc
cttataaatc 7800aaaagaatag cccgagatag ggttgagtgt tgttccagtt tggaacaaga
gtccactatt 7860aaagaacgtg gactccaacg tcaaagggcg aaaaaccgtc tatcagggcg
atggcccact 7920acgtgaacca tcacccaaat caagtttttt ggggtcgagg tgccgtaaag
cactaaatcg 7980gaaccctaaa gggagccccc gatttagagc ttgacgggga aagccggcga
acgtggcgag 8040aaaggaaggg aagaaagcga aaggagcggg cgctagggcg ctggcaagtg
tagcggtcac 8100gctgcgcgta accaccacac ccgccgcgct taatgcgccg ctacagggcg
cgtactatgg 8160ttgctttgac gtatgcggtg tgaaataccg cacagatgcg taaggagaaa
ataccgcatc 8220aggcgccatt cgccattcag gctgcgcaac tgttgggaag ggcgatcggt
gcgggcctct 8280tcgctattac gccagctggc gaaaggggga tgtgctgcaa ggcgattaag
ttgggtaacg 8340ccagggtttt cccagtcacg acgttgtaaa acgacggcca gtgaattcca
tggtctcaac 8400tttc
840498410DNAArtificial SequenceSynthetic vector VLP_CHI 532
9gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgga gttcatcccg acgcaaactt tctataacag aaggtaccaa ccccgaccct
960gggccccacg ccctacaatt caagtaatta gacctagacc acgtccacag aggcaggctg
1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac catgcgcgcg gtacctcaac
1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag gcgccgcaaa
1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag aagaagaaac
1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc gaagtcaagc
1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga taaagtaatg aaaccagcac
1320atgtgaaggg aactatcgac aatgccgatc tggctaaact ggcctttaag cggtcgtcta
1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc tcgaagttta
1440cccacgagaa acccgagggg tactataact ggcatcacgg agcagtgcag tattcaggag
1500gccggttcac tatcccgacg ggtgcaggca agccgggaga cagcggcaga ccgatcttcg
1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc caacgaaggt gcccgcacgg
1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct gagggagccg
1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc aaacactaca ttcccctgct
1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc ttgcgcatgc
1800ttgaggacaa cgtgatgaga cccggatact accagctact aaaagcatcg ctgacttgct
1860ctccccaccg ccaaagacgc agtactaagg acaattttaa tgtctataaa gccacaagac
1920catatctagc tcattgtcct gactgcggag aagggcattc gtgccacagc cctatcgcat
1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc tctttgcaga
2040tcgggataaa gacagatgac agccacgatt ggaccaagct gcgctatatg gatagccata
2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac ttcagcaccg tgcacgatca
2160ccgggaccat gggacacttt attctcgccc gatgcccgaa aggagagacg ctgacagtgg
2220gatttacgga cagcagaaag atcagccaca catgcacaca cccgttccat catgaaccac
2280ctgtgatagg tagggagagg ttccactctc gaccacaaca tggtaaagag ttaccttgca
2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat agaggtgcat atgcccccag
2400atactcctga ccgcacgctg atgacgcagc agtctggcaa cgtgaagatc acagttaatg
2460ggcagacggt gcggtacaag tgcaactgcg gtggctccgg aagtggatcc aacgagggac
2520tgacaaccac agacaaagtg atcaataact gcaaaattga tcagtgccat gctgcagtca
2580ctaatcacaa gaattggcaa tacaactccc ctttagtccc gcgcaacgct gaactcgggg
2640accgtaaagg aaagatccac atcccattcc cattggcaaa cgtgacttgc agagtgccaa
2700aagcaagaaa ccctacagta acttacggaa aaaaccaagt caccatgctg ctgtatcctg
2760accatccgac actcttgtct taccgtaaca tgggacagga accaaattac cacgaggagt
2820gggtgacaca caagaaggag gttaccttga ccgtgcctac tgagggtctg gaggtcactt
2880ggggcaacaa cgaaccatac aagtactggc cgcagatgtc tacgaacggt actgctcatg
2940gtcacccaca tgagataatc ttgtactatt atgagctgta ccccactatg actgtagtca
3000ttgtgtcggt ggcctcgttc gtgcttctgt cgatggtggg cacagcagtg ggaatgtgtg
3060tgtgcgcacg gcgcagatgc attacaccat atgaattaac accaggagcc actgttccct
3120tcctgctcag cctgctatgc tgcgtcagaa cgaccaaggc ggccacatat tacgaggctg
3180cggcatatct atggaacgaa cagcagcccc tgttctggtt gcaggctctt atcccgctgg
3240ccgccttgat cgtcctgtgc aactgtctga aactcttgcc atgctgctgt aagaccctgg
3300cttttttagc cgtaatgagc atcggtgccc acactgtgag cgcgtacgaa cacgtaacag
3360tgatcccgaa cacggtggga gtaccgtata agactcttgt caacagaccg ggttacagcc
3420ccatggtgtt ggagatggag ctacaatcag tcaccttgga accaacactg tcacttgact
3480acatcacgtg cgagtacaaa actgtcatcc cctccccgta cgtgaagtgc tgtggtacag
3540cagagtgcaa ggacaagagc ctaccagact acagctgcaa ggtctttact ggagtctacc
3600catttatgtg gggcggcgcc tactgctttt gcgacgccga aaatacgcaa ttgagcgagg
3660cacatgtaga gaaatctgaa tcttgcaaaa cagagtttgc atcggcctac agagcccaca
3720ccgcatcggc gtcggcgaag ctccgcgtcc tttaccaagg aaacaacatt accgtagctg
3780cctacgctaa cggtgaccat gccgtcacag taaaggacgc caagtttgtc gtgggcccaa
3840tgtcctccgc ctggacacct tttgacaaca aaatcgtggt gtacaaaggc gacgtctaca
3900acatggacta cccacctttt ggcgcaggaa gaccaggaca atttggtgac attcaaagtc
3960gtacaccgga aagtaaagac gtttatgcca acactcagtt ggtactacag aggccagcag
4020caggcacggt acatgtacca tactctcagg caccatctgg cttcaagtat tggctgaagg
4080aacgaggagc atcgctacag cacacggcac cgttcggttg ccagattgcg acaaacccgg
4140taagagctgt aaattgcgct gtggggaaca taccaatttc catcgacata ccggatgcgg
4200cctttactag ggttgtcgat gcaccctctg taacggacat gtcatgcgaa gtaccagcct
4260gcactcactc ctccgacttt gggggcgtcg ccatcatcaa atacacagct agcaagaaag
4320gtaaatgtgc agtacattcg atgaccaacg ccgttaccat tcgagaagcc gacgtagaag
4380tagaggggaa ctcccagctg caaatatcct tctcaacagc cctggcaagc gccgagtttc
4440gcgtgcaagt gtgctccaca caagtacact gcgcagccgc atgccaccct ccaaaggacc
4500acatagtcaa ttacccagca tcacacacca cccttggggt ccaggatata tccacaacgg
4560caatgtcttg ggtgcagaag attacgggag gagtaggatt aattgttgct gttgctgcct
4620taattttaat tgtggtgcta tgcgtgtcgt ttagcaggca ctaaggatct agatctgctg
4680tgccttctag ttgccagcca tctgttgttt gcccctcccc cgtgccttcc ttgaccctgg
4740aaggtgccac tcccactgtc ctttcctaat aaaatgagga aattgcatcg cattgtctga
4800gtaggtgtca ttctattctg gggggtgggg tggggcagga cagcaagggg gaggattggg
4860aagacaatag caggcatgct ggggatgcgg tgggctctat gggtacccag gtgctgaaga
4920attgacccgg ttcctcctgg gccagaaaga agcaggcaca tccccttctc tgtgacacac
4980cctgtccacg cccctggttc ttagttccag ccccactcat aggacactca tagctcagga
5040gggctccgcc ttcaatccca cccgctaaag tacttggagc ggtctctccc tccctcatca
5100gcccaccaaa ccaaacctag cctccaagag tgggaagaaa ttaaagcaag ataggctatt
5160aagtgcagag ggagagaaaa tgcctccaac atgtgaggaa gtaatgagag aaatcataga
5220attttaaggc catgatttaa ggccatcatg gcctaagctt gaaaggagat aggatccaag
5280cttggcgtaa tcatggtcat agctgtttcc tgtgtgaaat tgttatccgc tcacaattcc
5340acacaacata cgagccggaa gcataaagtg taaagcctgg ggtgcctaat gagtgagcta
5400actcacatta attgcgttgc gctcactgcc cgctttccag tcgggaaacc tgtcgtgcca
5460gctgcattaa tgaatcggcc aacgcgcggg gagaggcggt ttgcgtattg ggcgctcttc
5520cgcttcctcg ctcactgact cgctgcgctc ggtcgttcgg ctgcggcgag cggtatcagc
5580tcactcaaag gcggtaatac ggttatccac agaatcaggg gataacgcag gaaagaacat
5640gtgagcaaaa ggccagcaaa aggccaggaa ccgtaaaaag gccgcgttgc tggcgttttt
5700ccataggctc cgcccccctg acgagcatca caaaaatcga cgctcaagtc agaggtggcg
5760aaacccgaca ggactataaa gataccaggc gtttccccct ggaagctccc tcgtgcgctc
5820tcctgttccg accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt
5880ggcgctttct catagctcac gctgtaggta tctcagttcg gtgtaggtcg ttcgctccaa
5940gctgggctgt gtgcacgaac cccccgttca gcccgaccgc tgcgccttat ccggtaacta
6000tcgtcttgag tccaacccgg taagacacga cttatcgcca ctggcagcag ccactggtaa
6060caggattagc agagcgaggt atgtaggcgg tgctacagag ttcttgaagt ggtggcctaa
6120ctacggctac actagaagaa cagtatttgg tatctgcgct ctgctgaagc cagttacctt
6180cggaaaaaga gttggtagct cttgatccgg caaacaaacc accgctggta gcggtggttt
6240ttttgtttgc aagcagcaga ttacgcgcag aaaaaaagga tctcaagaag atcctttgat
6300cttttctacg gggtctgacg ctcagtggaa cgaaaactca cgttaaggga ttttggtcat
6360gagattatca aaaaggatct tcacctagat ccttttaaat taaaaatgaa gttttaaatc
6420aatctaaagt atatatgagt aaacttggtc tgacagttac caatgcttaa tcagtgaggc
6480acctatctca gcgatctgtc tatttcgttc atccatagtt gcctgactcc ccgtcgtgta
6540gataactacg atacgggagg gcttaccatc tggccccagt gctgcaatga taccgcgaga
6600accacgctca ccggctccag atttatcagc aataaaccag ccagccggaa gggccgagcg
6660cagaagtggt cctgcaactt tatccgcctc catccagtct attaattgtt gccgggaagc
6720tagagtaagt agttcgccag ttaatagttt gcgcaacgtt gttgccattg ctacaggcat
6780cgtggtgtca cgctcgtcgt ttggtatggc ttcattcagc tccggttccc aacgatcaag
6840gcgagttaca tgatccccca tgttgtgcaa aaaagcggtt agctccttcg gtcctccgat
6900cgttgtcaga agtaagttgg ccgcagtgtt atcactcatg gttatggcag cactgcataa
6960ttctcttact gtcatgccat ccgtaagatg cttttctgtg actggtgagt actcaaccaa
7020gtcattctga gaatagtgta tgcggcgacc gagttgctct tgcccggcgt caatacggga
7080taataccgcg ccacatagca gaactttaaa agtgctcatc attggaaaac gttcttcggg
7140gcgaaaactc tcaaggatct taccgctgtt gagatccagt tcgatgtaac ccactcgtgc
7200acccaactga tcttcagcat cttttacttt caccagcgtt tctgggtgag caaaaacagg
7260aaggcaaaat gccgcaaaaa agggaataag ggcgacacgg aaatgttgaa tactcatact
7320cttccttttt caatattatt gaagcattta tcagggttat tgtctcatga gcggatacat
7380atttgaatgt atttagaaaa ataaacaaat aggggttccg cgcacatttc cccgaaaagt
7440gccacctgac gtctaagaaa ccattattat catgacatta acctataaaa ataggcgtat
7500cacgaggccc tttcgggtcg cgcgtttcgg tgatgacggt gaaaacctct gacacatgca
7560gctcccgttg acggtcacag cttgtctgta agcggatgcc gggagcagac aagcccgtca
7620gggcgcgtca gcgggtgttg gcgggtgtcg gggctggctt aactatgcgg catcagagca
7680gattgtactg agagtgcacc ataaaattgt aaacgttaat attttgttaa aattcgcgtt
7740aaatttttgt taaatcagct cattttttaa ccaataggcc gaaatcggca aaatccctta
7800taaatcaaaa gaatagcccg agatagggtt gagtgttgtt ccagtttgga acaagagtcc
7860actattaaag aacgtggact ccaacgtcaa agggcgaaaa accgtctatc agggcgatgg
7920cccactacgt gaaccatcac ccaaatcaag ttttttgggg tcgaggtgcc gtaaagcact
7980aaatcggaac cctaaaggga gcccccgatt tagagcttga cggggaaagc cggcgaacgt
8040ggcgagaaag gaagggaaga aagcgaaagg agcgggcgct agggcgctgg caagtgtagc
8100ggtcacgctg cgcgtaacca ccacacccgc cgcgcttaat gcgccgctac agggcgcgta
8160ctatggttgc tttgacgtat gcggtgtgaa ataccgcaca gatgcgtaag gagaaaatac
8220cgcatcaggc gccattcgcc attcaggctg cgcaactgtt gggaagggcg atcggtgcgg
8280gcctcttcgc tattacgcca gctggcgaaa gggggatgtg ctgcaaggcg attaagttgg
8340gtaacgccag ggttttccca gtcacgacgt tgtaaaacga cggccagtga attccatggt
8400ctcaactttc
8410108431DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 518
10gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggctccg
2460gaggatccag ttcagtcacc gtgacacctc ctgatgggac tagcgccctg gtggaatgcg
2520agtgtggcgg cacaaagatc tccgagacca tcaacaagac aaaacagttc agccagtgca
2580caaagaagga gcagtgcaga gcatatcggc tgcagaacga taagtgggtg tataattctg
2640acaaactgcc caaagcagcg ggagccacct taaaaggaaa actgcatgtc ccattcttgc
2700tggcagacgg caaatgcacc gtgcctctag caccagaacc tatgataacc ttcggtttca
2760gatcagtgtc actgaaactg caccctaaga atcccacata tctaatcacc cgccaacttg
2820ctgatgagcc tcactacacg cacgagctca tatctgaacc agctgttagg aattttaccg
2880tcaccgaaaa agggtgggag tttgtatggg gaaaccaccc gccgaaaagg ttttgggcac
2940aggaaacagc acccggaaat ccacatgggc taccgcacga ggtgataact cattattacc
3000acagataccc tatgtccacc atcctgggtt tgtcaatttg tgccgccatt gcaaccgttt
3060ccgttgcagc gtctacctgg ctgttttgca gatcaagagt tgcgtgccta actccttacc
3120ggctaacacc taacgctagg ataccatttt gtctggctgt gctttgctgc gcccgcactg
3180cccgggccga gaccacctgg gagtccttgg atcacctatg gaacaataac caacagatgt
3240tctggattca attgctgatc cctctggccg ccttgatcgt agtgactcgc ctgctcaggt
3300gcgtgtgctg tgtcgtgcct tttttagtca tggccggcgc cgcaggcgcc ggcgcctacg
3360agcacgcgac cacgatgccg agccaagcgg gaatctcgta taacactata gtcaacagag
3420caggctacgc accactccct atcagcataa caccaacaaa gatcaagctg atacctacag
3480tgaacttgga gtacgtcacc tgccactaca aaacaggaat ggattcacca gccatcaaat
3540gctgcggatc tcaggaatgc actccaactt acaggcctga tgaacagtgc aaagtcttca
3600caggggttta cccgttcatg tggggtggtg catattgctt ttgcgacact gagaacaccc
3660aagtcagcaa ggcctacgta atgaaatctg acgactgcct tgcggatcat gctgaagcat
3720ataaagcgca cacagcctca gtgcaggcgt tcctcaacat cacagtggga gaacactcta
3780ttgtgactac cgtgtatgtg aatggagaaa ctcctgtgaa tttcaatggg gtcaaaataa
3840ctgcaggtcc gctttccaca gcttggacac cctttgatcg caaaatcgtg cagtatgccg
3900gggagatcta taattatgat tttcctgagt atggggcagg acaaccagga gcatttggag
3960atatacaatc cagaacagtc tcaagctctg atctgtatgc caataccaac ctagtgctgc
4020agagacccaa agcaggagcg atccacgtgc catacactca ggcaccttcg ggttttgagc
4080aatggaagaa agataaagct ccatcattga aatttaccgc ccctttcgga tgcgaaatat
4140atacaaaccc cattcgcgcc gaaaactgtg ctgtagggtc aattccatta gcctttgaca
4200ttcccgacgc cttgttcacc agggtgtcag aaacaccgac actttcagcg gccgaatgca
4260ctcttaacga gtgcgtgtat tcttccgact ttggtgggat cgccacggtc aagtactcgg
4320ccagcaagtc aggcaagtgc gcagtccatg tgccatcagg gactgctacc ctaaaagaag
4380cagcagtcga gctaaccgag caagggtcgg cgactatcca tttctcgacc gcaaatatcc
4440acccggagtt caggctccaa atatgcacat catatgttac gtgcaaaggt gattgtcacc
4500ccccgaaaga ccatattgtg acacaccctc agtatcacgc ccaaacattt acagccgcgg
4560tgtcaaaaac cgcgtggacg tggttaacat ccctgctggg aggatcagcc gtaattatta
4620taattggctt ggtgctggct actattgtgg ccatgtacgt gctgaccaac cagaaacata
4680attaaggatc tagatctgct gtgccttcta gttgccagcc atctgttgtt tgcccctccc
4740ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa taaaatgagg
4800aaattgcatc gcattgtctg agtaggtgtc attctattct ggggggtggg gtggggcagg
4860acagcaaggg ggaggattgg gaagacaata gcaggcatgc tggggatgcg gtgggctcta
4920tgggtaccca ggtgctgaag aattgacccg gttcctcctg ggccagaaag aagcaggcac
4980atccccttct ctgtgacaca ccctgtccac gcccctggtt cttagttcca gccccactca
5040taggacactc atagctcagg agggctccgc cttcaatccc acccgctaaa gtacttggag
5100cggtctctcc ctccctcatc agcccaccaa accaaaccta gcctccaaga gtgggaagaa
5160attaaagcaa gataggctat taagtgcaga gggagagaaa atgcctccaa catgtgagga
5220agtaatgaga gaaatcatag aattttaagg ccatgattta aggccatcat ggcctaagct
5280tgaaaggaga taggatcaaa gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa
5340ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg
5400gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca
5460gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
5520tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
5580gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg
5640ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
5700ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg
5760acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc
5820tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc
5880ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc
5940ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
6000ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc
6060actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga
6120gttcttgaag tggtggccta actacggcta cactagaaga acagtatttg gtatctgcgc
6180tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
6240caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg
6300atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc
6360acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa
6420ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta
6480ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt
6540tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag
6600tgctgcaatg ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca
6660gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc
6720tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt
6780tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag
6840ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt
6900tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat
6960ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt
7020gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc
7080ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat
7140cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag
7200ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt
7260ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg
7320gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta
7380ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc
7440gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt
7500aacctataaa aataggcgta tcacgaggcc ctttcgggtc gcgcgtttcg gtgatgacgg
7560tgaaaacctc tgacacatgc agctcccgtt gacggtcaca gcttgtctgt aagcggatgc
7620cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct
7680taactatgcg gcatcagagc agattgtact gagagtgcac cataaaattg taaacgttaa
7740tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
7800cgaaatcggc aaaatccctt ataaatcaaa agaatagccc gagatagggt tgagtgttgt
7860tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
7920aaccgtctat cagggcgatg gcccactacg tgaaccatca cccaaatcaa gttttttggg
7980gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
8040acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
8100tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
8160tgcgccgcta cagggcgcgt actatggttg ctttgacgta tgcggtgtga aataccgcac
8220agatgcgtaa ggagaaaata ccgcatcagg cgccattcgc cattcaggct gcgcaactgt
8280tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt
8340gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg
8400acggccagtg aattccatgg tctcaacttt c
8431118431DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 519
11gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggcagtt
2460ccggaggatc ctcagtcacc gtgacacctc ctgatgggac tagcgccctg gtggaatgcg
2520agtgtggcgg cacaaagatc tccgagacca tcaacaagac aaaacagttc agccagtgca
2580caaagaagga gcagtgcaga gcatatcggc tgcagaacga taagtgggtg tataattctg
2640acaaactgcc caaagcagcg ggagccacct taaaaggaaa actgcatgtc ccattcttgc
2700tggcagacgg caaatgcacc gtgcctctag caccagaacc tatgataacc ttcggtttca
2760gatcagtgtc actgaaactg caccctaaga atcccacata tctaatcacc cgccaacttg
2820ctgatgagcc tcactacacg cacgagctca tatctgaacc agctgttagg aattttaccg
2880tcaccgaaaa agggtgggag tttgtatggg gaaaccaccc gccgaaaagg ttttgggcac
2940aggaaacagc acccggaaat ccacatgggc taccgcacga ggtgataact cattattacc
3000acagataccc tatgtccacc atcctgggtt tgtcaatttg tgccgccatt gcaaccgttt
3060ccgttgcagc gtctacctgg ctgttttgca gatcaagagt tgcgtgccta actccttacc
3120ggctaacacc taacgctagg ataccatttt gtctggctgt gctttgctgc gcccgcactg
3180cccgggccga gaccacctgg gagtccttgg atcacctatg gaacaataac caacagatgt
3240tctggattca attgctgatc cctctggccg ccttgatcgt agtgactcgc ctgctcaggt
3300gcgtgtgctg tgtcgtgcct tttttagtca tggccggcgc cgcaggcgcc ggcgcctacg
3360agcacgcgac cacgatgccg agccaagcgg gaatctcgta taacactata gtcaacagag
3420caggctacgc accactccct atcagcataa caccaacaaa gatcaagctg atacctacag
3480tgaacttgga gtacgtcacc tgccactaca aaacaggaat ggattcacca gccatcaaat
3540gctgcggatc tcaggaatgc actccaactt acaggcctga tgaacagtgc aaagtcttca
3600caggggttta cccgttcatg tggggtggtg catattgctt ttgcgacact gagaacaccc
3660aagtcagcaa ggcctacgta atgaaatctg acgactgcct tgcggatcat gctgaagcat
3720ataaagcgca cacagcctca gtgcaggcgt tcctcaacat cacagtggga gaacactcta
3780ttgtgactac cgtgtatgtg aatggagaaa ctcctgtgaa tttcaatggg gtcaaaataa
3840ctgcaggtcc gctttccaca gcttggacac cctttgatcg caaaatcgtg cagtatgccg
3900gggagatcta taattatgat tttcctgagt atggggcagg acaaccagga gcatttggag
3960atatacaatc cagaacagtc tcaagctctg atctgtatgc caataccaac ctagtgctgc
4020agagacccaa agcaggagcg atccacgtgc catacactca ggcaccttcg ggttttgagc
4080aatggaagaa agataaagct ccatcattga aatttaccgc ccctttcgga tgcgaaatat
4140atacaaaccc cattcgcgcc gaaaactgtg ctgtagggtc aattccatta gcctttgaca
4200ttcccgacgc cttgttcacc agggtgtcag aaacaccgac actttcagcg gccgaatgca
4260ctcttaacga gtgcgtgtat tcttccgact ttggtgggat cgccacggtc aagtactcgg
4320ccagcaagtc aggcaagtgc gcagtccatg tgccatcagg gactgctacc ctaaaagaag
4380cagcagtcga gctaaccgag caagggtcgg cgactatcca tttctcgacc gcaaatatcc
4440acccggagtt caggctccaa atatgcacat catatgttac gtgcaaaggt gattgtcacc
4500ccccgaaaga ccatattgtg acacaccctc agtatcacgc ccaaacattt acagccgcgg
4560tgtcaaaaac cgcgtggacg tggttaacat ccctgctggg aggatcagcc gtaattatta
4620taattggctt ggtgctggct actattgtgg ccatgtacgt gctgaccaac cagaaacata
4680attaaggatc tagatctgct gtgccttcta gttgccagcc atctgttgtt tgcccctccc
4740ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa taaaatgagg
4800aaattgcatc gcattgtctg agtaggtgtc attctattct ggggggtggg gtggggcagg
4860acagcaaggg ggaggattgg gaagacaata gcaggcatgc tggggatgcg gtgggctcta
4920tgggtaccca ggtgctgaag aattgacccg gttcctcctg ggccagaaag aagcaggcac
4980atccccttct ctgtgacaca ccctgtccac gcccctggtt cttagttcca gccccactca
5040taggacactc atagctcagg agggctccgc cttcaatccc acccgctaaa gtacttggag
5100cggtctctcc ctccctcatc agcccaccaa accaaaccta gcctccaaga gtgggaagaa
5160attaaagcaa gataggctat taagtgcaga gggagagaaa atgcctccaa catgtgagga
5220agtaatgaga gaaatcatag aattttaagg ccatgattta aggccatcat ggcctaagct
5280tgaaaggaga taggatcaaa gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa
5340ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg
5400gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca
5460gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
5520tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
5580gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg
5640ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
5700ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg
5760acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc
5820tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc
5880ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc
5940ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
6000ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc
6060actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga
6120gttcttgaag tggtggccta actacggcta cactagaaga acagtatttg gtatctgcgc
6180tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
6240caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg
6300atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc
6360acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa
6420ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta
6480ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt
6540tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag
6600tgctgcaatg ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca
6660gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc
6720tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt
6780tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag
6840ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt
6900tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat
6960ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt
7020gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc
7080ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat
7140cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag
7200ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt
7260ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg
7320gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta
7380ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc
7440gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt
7500aacctataaa aataggcgta tcacgaggcc ctttcgggtc gcgcgtttcg gtgatgacgg
7560tgaaaacctc tgacacatgc agctcccgtt gacggtcaca gcttgtctgt aagcggatgc
7620cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct
7680taactatgcg gcatcagagc agattgtact gagagtgcac cataaaattg taaacgttaa
7740tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
7800cgaaatcggc aaaatccctt ataaatcaaa agaatagccc gagatagggt tgagtgttgt
7860tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
7920aaccgtctat cagggcgatg gcccactacg tgaaccatca cccaaatcaa gttttttggg
7980gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
8040acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
8100tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
8160tgcgccgcta cagggcgcgt actatggttg ctttgacgta tgcggtgtga aataccgcac
8220agatgcgtaa ggagaaaata ccgcatcagg cgccattcgc cattcaggct gcgcaactgt
8280tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt
8340gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg
8400acggccagtg aattccatgg tctcaacttt c
8431128431DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 538
12gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggcagtt
2460cagtcaccgt gacacctcct gatgggacta gcgccctggt ggaatgcgag tgtggctccg
2520gaggatccgg cacaaagatc tccgagacca tcaacaagac aaaacagttc agccagtgca
2580caaagaagga gcagtgcaga gcatatcggc tgcagaacga taagtgggtg tataattctg
2640acaaactgcc caaagcagcg ggagccacct taaaaggaaa actgcatgtc ccattcttgc
2700tggcagacgg caaatgcacc gtgcctctag caccagaacc tatgataacc ttcggtttca
2760gatcagtgtc actgaaactg caccctaaga atcccacata tctaatcacc cgccaacttg
2820ctgatgagcc tcactacacg cacgagctca tatctgaacc agctgttagg aattttaccg
2880tcaccgaaaa agggtgggag tttgtatggg gaaaccaccc gccgaaaagg ttttgggcac
2940aggaaacagc acccggaaat ccacatgggc taccgcacga ggtgataact cattattacc
3000acagataccc tatgtccacc atcctgggtt tgtcaatttg tgccgccatt gcaaccgttt
3060ccgttgcagc gtctacctgg ctgttttgca gatcaagagt tgcgtgccta actccttacc
3120ggctaacacc taacgctagg ataccatttt gtctggctgt gctttgctgc gcccgcactg
3180cccgggccga gaccacctgg gagtccttgg atcacctatg gaacaataac caacagatgt
3240tctggattca attgctgatc cctctggccg ccttgatcgt agtgactcgc ctgctcaggt
3300gcgtgtgctg tgtcgtgcct tttttagtca tggccggcgc cgcaggcgcc ggcgcctacg
3360agcacgcgac cacgatgccg agccaagcgg gaatctcgta taacactata gtcaacagag
3420caggctacgc accactccct atcagcataa caccaacaaa gatcaagctg atacctacag
3480tgaacttgga gtacgtcacc tgccactaca aaacaggaat ggattcacca gccatcaaat
3540gctgcggatc tcaggaatgc actccaactt acaggcctga tgaacagtgc aaagtcttca
3600caggggttta cccgttcatg tggggtggtg catattgctt ttgcgacact gagaacaccc
3660aagtcagcaa ggcctacgta atgaaatctg acgactgcct tgcggatcat gctgaagcat
3720ataaagcgca cacagcctca gtgcaggcgt tcctcaacat cacagtggga gaacactcta
3780ttgtgactac cgtgtatgtg aatggagaaa ctcctgtgaa tttcaatggg gtcaaaataa
3840ctgcaggtcc gctttccaca gcttggacac cctttgatcg caaaatcgtg cagtatgccg
3900gggagatcta taattatgat tttcctgagt atggggcagg acaaccagga gcatttggag
3960atatacaatc cagaacagtc tcaagctctg atctgtatgc caataccaac ctagtgctgc
4020agagacccaa agcaggagcg atccacgtgc catacactca ggcaccttcg ggttttgagc
4080aatggaagaa agataaagct ccatcattga aatttaccgc ccctttcgga tgcgaaatat
4140atacaaaccc cattcgcgcc gaaaactgtg ctgtagggtc aattccatta gcctttgaca
4200ttcccgacgc cttgttcacc agggtgtcag aaacaccgac actttcagcg gccgaatgca
4260ctcttaacga gtgcgtgtat tcttccgact ttggtgggat cgccacggtc aagtactcgg
4320ccagcaagtc aggcaagtgc gcagtccatg tgccatcagg gactgctacc ctaaaagaag
4380cagcagtcga gctaaccgag caagggtcgg cgactatcca tttctcgacc gcaaatatcc
4440acccggagtt caggctccaa atatgcacat catatgttac gtgcaaaggt gattgtcacc
4500ccccgaaaga ccatattgtg acacaccctc agtatcacgc ccaaacattt acagccgcgg
4560tgtcaaaaac cgcgtggacg tggttaacat ccctgctggg aggatcagcc gtaattatta
4620taattggctt ggtgctggct actattgtgg ccatgtacgt gctgaccaac cagaaacata
4680attaaggatc tagatctgct gtgccttcta gttgccagcc atctgttgtt tgcccctccc
4740ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa taaaatgagg
4800aaattgcatc gcattgtctg agtaggtgtc attctattct ggggggtggg gtggggcagg
4860acagcaaggg ggaggattgg gaagacaata gcaggcatgc tggggatgcg gtgggctcta
4920tgggtaccca ggtgctgaag aattgacccg gttcctcctg ggccagaaag aagcaggcac
4980atccccttct ctgtgacaca ccctgtccac gcccctggtt cttagttcca gccccactca
5040taggacactc atagctcagg agggctccgc cttcaatccc acccgctaaa gtacttggag
5100cggtctctcc ctccctcatc agcccaccaa accaaaccta gcctccaaga gtgggaagaa
5160attaaagcaa gataggctat taagtgcaga gggagagaaa atgcctccaa catgtgagga
5220agtaatgaga gaaatcatag aattttaagg ccatgattta aggccatcat ggcctaagct
5280tgaaaggaga taggatcaaa gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa
5340ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg
5400gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca
5460gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
5520tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
5580gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg
5640ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
5700ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg
5760acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc
5820tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc
5880ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc
5940ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
6000ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc
6060actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga
6120gttcttgaag tggtggccta actacggcta cactagaaga acagtatttg gtatctgcgc
6180tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
6240caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg
6300atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc
6360acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa
6420ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta
6480ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt
6540tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag
6600tgctgcaatg ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca
6660gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc
6720tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt
6780tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag
6840ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt
6900tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat
6960ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt
7020gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc
7080ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat
7140cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag
7200ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt
7260ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg
7320gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta
7380ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc
7440gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt
7500aacctataaa aataggcgta tcacgaggcc ctttcgggtc gcgcgtttcg gtgatgacgg
7560tgaaaacctc tgacacatgc agctcccgtt gacggtcaca gcttgtctgt aagcggatgc
7620cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct
7680taactatgcg gcatcagagc agattgtact gagagtgcac cataaaattg taaacgttaa
7740tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
7800cgaaatcggc aaaatccctt ataaatcaaa agaatagccc gagatagggt tgagtgttgt
7860tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
7920aaccgtctat cagggcgatg gcccactacg tgaaccatca cccaaatcaa gttttttggg
7980gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
8040acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
8100tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
8160tgcgccgcta cagggcgcgt actatggttg ctttgacgta tgcggtgtga aataccgcac
8220agatgcgtaa ggagaaaata ccgcatcagg cgccattcgc cattcaggct gcgcaactgt
8280tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt
8340gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg
8400acggccagtg aattccatgg tctcaacttt c
8431133750DNAArtificial SequenceSynthetic vector VLP_CHI 512 -CHIKV VLP
13atggagttca tcccgacgca aactttctat aacagaaggt accaaccccg accctgggcc
60ccacgcccta caattcaagt aattagacct agaccacgtc cacagaggca ggctgggcaa
120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag
180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac
240ccaaagcaaa agaagcaacc accacaaaag aagccggctc aaaagaagaa gaaaccaggc
300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt caagcatgaa
360ggcaaagtga tgggctacgc atgcctggtg ggggataaag taatgaaacc agcacatgtg
420aagggaacta tcgacaatgc cgatctggct aaactggcct ttaagcggtc gtctaaatac
480gatcttgaat gtgcacagat accggtgcac atgaagtctg atgcctcgaa gtttacccac
540gagaaacccg aggggtacta taactggcat cacggagcag tgcagtattc aggaggccgg
600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg gcagaccgat cttcgacaac
660aaaggacggg tggtggccat cgtcctagga ggggccaacg aaggtgcccg cacggccctc
720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta cccctgaggg agccgaagag
780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
900gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
960caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
1140ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
1200gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
1260accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
1320acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
1380ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
1500cctgaccgca cgctgatgac gcagcagtcc ggaggatcca acgtgaagat cacagttaat
1560gggcagacgg tgcggtacaa gtgcaactgc ggtggctcaa acgagggact gacaaccaca
1620gacaaagtga tcaataactg caaaattgat cagtgccatg ctgcagtcac taatcacaag
1680aattggcaat acaactcccc tttagtcccg cgcaacgctg aactcgggga ccgtaaagga
1740aagatccaca tcccattccc attggcaaac gtgacttgca gagtgccaaa agcaagaaac
1800cctacagtaa cttacggaaa aaaccaagtc accatgctgc tgtatcctga ccatccgaca
1860ctcttgtctt accgtaacat gggacaggaa ccaaattacc acgaggagtg ggtgacacac
1920aagaaggagg ttaccttgac cgtgcctact gagggtctgg aggtcacttg gggcaacaac
1980gaaccataca agtactggcc gcagatgtct acgaacggta ctgctcatgg tcacccacat
2040gagataatct tgtactatta tgagctgtac cccactatga ctgtagtcat tgtgtcggtg
2100gcctcgttcg tgcttctgtc gatggtgggc acagcagtgg gaatgtgtgt gtgcgcacgg
2160cgcagatgca ttacaccata tgaattaaca ccaggagcca ctgttccctt cctgctcagc
2220ctgctatgct gcgtcagaac gaccaaggcg gccacatatt acgaggctgc ggcatatcta
2280tggaacgaac agcagcccct gttctggttg caggctctta tcccgctggc cgccttgatc
2340gtcctgtgca actgtctgaa actcttgcca tgctgctgta agaccctggc ttttttagcc
2400gtaatgagca tcggtgccca cactgtgagc gcgtacgaac acgtaacagt gatcccgaac
2460acggtgggag taccgtataa gactcttgtc aacagaccgg gttacagccc catggtgttg
2520gagatggagc tacaatcagt caccttggaa ccaacactgt cacttgacta catcacgtgc
2580gagtacaaaa ctgtcatccc ctccccgtac gtgaagtgct gtggtacagc agagtgcaag
2640gacaagagcc taccagacta cagctgcaag gtctttactg gagtctaccc atttatgtgg
2700ggcggcgcct actgcttttg cgacgccgaa aatacgcaat tgagcgaggc acatgtagag
2760aaatctgaat cttgcaaaac agagtttgca tcggcctaca gagcccacac cgcatcggcg
2820tcggcgaagc tccgcgtcct ttaccaagga aacaacatta ccgtagctgc ctacgctaac
2880ggtgaccatg ccgtcacagt aaaggacgcc aagtttgtcg tgggcccaat gtcctccgcc
2940tggacacctt ttgacaacaa aatcgtggtg tacaaaggcg acgtctacaa catggactac
3000ccaccttttg gcgcaggaag accaggacaa tttggtgaca ttcaaagtcg tacaccggaa
3060agtaaagacg tttatgccaa cactcagttg gtactacaga ggccagcagc aggcacggta
3120catgtaccat actctcaggc accatctggc ttcaagtatt ggctgaagga acgaggagca
3180tcgctacagc acacggcacc gttcggttgc cagattgcga caaacccggt aagagctgta
3240aattgcgctg tggggaacat accaatttcc atcgacatac cggatgcggc ctttactagg
3300gttgtcgatg caccctctgt aacggacatg tcatgcgaag taccagcctg cactcactcc
3360tccgactttg ggggcgtcgc catcatcaaa tacacagcta gcaagaaagg taaatgtgca
3420gtacattcga tgaccaacgc cgttaccatt cgagaagccg acgtagaagt agaggggaac
3480tcccagctgc aaatatcctt ctcaacagcc ctggcaagcg ccgagtttcg cgtgcaagtg
3540tgctccacac aagtacactg cgcagccgca tgccaccctc caaaggacca catagtcaat
3600tacccagcat cacacaccac ccttggggtc caggatatat ccacaacggc aatgtcttgg
3660gtgcagaaga ttacgggagg agtaggatta attgttgctg ttgctgcctt aattttaatt
3720gtggtgctat gcgtgtcgtt tagcaggcac
3750141250PRTArtificial SequenceSynthetic vector VLP_CHI 512 -CHIKV VLP
14Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1
5 10 15Arg Pro Trp Ala Pro Arg
Pro Thr Ile Gln Val Ile Arg Pro Arg Pro 20 25
30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile
Ser Ala Val 35 40 45Asn Lys Leu
Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala
Pro Gln Asn Asp65 70 75
80Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys
85 90 95Lys Lys Pro Gly Arg Arg
Glu Arg Met Cys Met Lys Ile Glu Asn Asp 100
105 110Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met
Gly Tyr Ala Cys 115 120 125Leu Val
Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 130
135 140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys
Arg Ser Ser Lys Tyr145 150 155
160Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175Lys Phe Thr His
Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile
Pro Thr Gly Ala Gly 195 200 205Lys
Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220Val Ala Ile Val Leu Gly Gly Ala Asn Glu
Gly Ala Arg Thr Ala Leu225 230 235
240Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro
Glu 245 250 255Gly Ala Glu
Glu Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro
Cys Thr Pro Cys Cys Tyr 275 280
285Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300Arg Pro Gly Tyr Tyr Gln Leu Leu
Lys Ala Ser Leu Thr Cys Ser Pro305 310
315 320His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn
Val Tyr Lys Ala 325 330
335Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser
340 345 350Cys His Ser Pro Ile Ala
Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355 360
365Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys
Thr Asp 370 375 380Asp Ser His Asp Trp
Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro385 390
395 400Ala Asp Ala Glu Arg Ala Gly Leu Leu Val
Arg Thr Ser Ala Pro Cys 405 410
415Thr Ile Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys
420 425 430Gly Glu Thr Leu Thr
Val Gly Phe Thr Asp Ser Arg Lys Ile Ser His 435
440 445Thr Cys Thr His Pro Phe His His Glu Pro Pro Val
Ile Gly Arg Glu 450 455 460Arg Phe His
Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr465
470 475 480Tyr Val Gln Ser Thr Ala Ala
Thr Ala Glu Glu Ile Glu Val His Met 485
490 495Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln
Gln Ser Gly Gly 500 505 510Ser
Asn Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys 515
520 525Asn Cys Gly Gly Ser Asn Glu Gly Leu
Thr Thr Thr Asp Lys Val Ile 530 535
540Asn Asn Cys Lys Ile Asp Gln Cys His Ala Ala Val Thr Asn His Lys545
550 555 560Asn Trp Gln Tyr
Asn Ser Pro Leu Val Pro Arg Asn Ala Glu Leu Gly 565
570 575Asp Arg Lys Gly Lys Ile His Ile Pro Phe
Pro Leu Ala Asn Val Thr 580 585
590Cys Arg Val Pro Lys Ala Arg Asn Pro Thr Val Thr Tyr Gly Lys Asn
595 600 605Gln Val Thr Met Leu Leu Tyr
Pro Asp His Pro Thr Leu Leu Ser Tyr 610 615
620Arg Asn Met Gly Gln Glu Pro Asn Tyr His Glu Glu Trp Val Thr
His625 630 635 640Lys Lys
Glu Val Thr Leu Thr Val Pro Thr Glu Gly Leu Glu Val Thr
645 650 655Trp Gly Asn Asn Glu Pro Tyr
Lys Tyr Trp Pro Gln Met Ser Thr Asn 660 665
670Gly Thr Ala His Gly His Pro His Glu Ile Ile Leu Tyr Tyr
Tyr Glu 675 680 685Leu Tyr Pro Thr
Met Thr Val Val Ile Val Ser Val Ala Ser Phe Val 690
695 700Leu Leu Ser Met Val Gly Thr Ala Val Gly Met Cys
Val Cys Ala Arg705 710 715
720Arg Arg Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly Ala Thr Val Pro
725 730 735Phe Leu Leu Ser Leu
Leu Cys Cys Val Arg Thr Thr Lys Ala Ala Thr 740
745 750Tyr Tyr Glu Ala Ala Ala Tyr Leu Trp Asn Glu Gln
Gln Pro Leu Phe 755 760 765Trp Leu
Gln Ala Leu Ile Pro Leu Ala Ala Leu Ile Val Leu Cys Asn 770
775 780Cys Leu Lys Leu Leu Pro Cys Cys Cys Lys Thr
Leu Ala Phe Leu Ala785 790 795
800Val Met Ser Ile Gly Ala His Thr Val Ser Ala Tyr Glu His Val Thr
805 810 815Val Ile Pro Asn
Thr Val Gly Val Pro Tyr Lys Thr Leu Val Asn Arg 820
825 830Pro Gly Tyr Ser Pro Met Val Leu Glu Met Glu
Leu Gln Ser Val Thr 835 840 845Leu
Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys Glu Tyr Lys Thr 850
855 860Val Ile Pro Ser Pro Tyr Val Lys Cys Cys
Gly Thr Ala Glu Cys Lys865 870 875
880Asp Lys Ser Leu Pro Asp Tyr Ser Cys Lys Val Phe Thr Gly Val
Tyr 885 890 895Pro Phe Met
Trp Gly Gly Ala Tyr Cys Phe Cys Asp Ala Glu Asn Thr 900
905 910Gln Leu Ser Glu Ala His Val Glu Lys Ser
Glu Ser Cys Lys Thr Glu 915 920
925Phe Ala Ser Ala Tyr Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu 930
935 940Arg Val Leu Tyr Gln Gly Asn Asn
Ile Thr Val Ala Ala Tyr Ala Asn945 950
955 960Gly Asp His Ala Val Thr Val Lys Asp Ala Lys Phe
Val Val Gly Pro 965 970
975Met Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys
980 985 990Gly Asp Val Tyr Asn Met
Asp Tyr Pro Pro Phe Gly Ala Gly Arg Pro 995 1000
1005Gly Gln Phe Gly Asp Ile Gln Ser Arg Thr Pro Glu
Ser Lys Asp 1010 1015 1020Val Tyr Ala
Asn Thr Gln Leu Val Leu Gln Arg Pro Ala Ala Gly 1025
1030 1035Thr Val His Val Pro Tyr Ser Gln Ala Pro Ser
Gly Phe Lys Tyr 1040 1045 1050Trp Leu
Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe 1055
1060 1065Gly Cys Gln Ile Ala Thr Asn Pro Val Arg
Ala Val Asn Cys Ala 1070 1075 1080Val
Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala Ala Phe 1085
1090 1095Thr Arg Val Val Asp Ala Pro Ser Val
Thr Asp Met Ser Cys Glu 1100 1105
1110Val Pro Ala Cys Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile
1115 1120 1125Ile Lys Tyr Thr Ala Ser
Lys Lys Gly Lys Cys Ala Val His Ser 1130 1135
1140Met Thr Asn Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val
Glu 1145 1150 1155Gly Asn Ser Gln Leu
Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser 1160 1165
1170Ala Glu Phe Arg Val Gln Val Cys Ser Thr Gln Val His
Cys Ala 1175 1180 1185Ala Ala Cys His
Pro Pro Lys Asp His Ile Val Asn Tyr Pro Ala 1190
1195 1200Ser His Thr Thr Leu Gly Val Gln Asp Ile Ser
Thr Thr Ala Met 1205 1210 1215Ser Trp
Val Gln Lys Ile Thr Gly Gly Val Gly Leu Ile Val Ala 1220
1225 1230Val Ala Ala Leu Ile Leu Ile Val Val Leu
Cys Val Ser Phe Ser 1235 1240 1245Arg
His 1250153756DNAArtificial SequenceSynthetic vector VLP_CHI 532
-CHIKV VLP 15atggagttca tcccgacgca aactttctat aacagaaggt accaaccccg
accctgggcc 60ccacgcccta caattcaagt aattagacct agaccacgtc cacagaggca
ggctgggcaa 120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc
tcaacagaag 180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc
gcaaaacgac 240ccaaagcaaa agaagcaacc accacaaaag aagccggctc aaaagaagaa
gaaaccaggc 300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt
caagcatgaa 360ggcaaagtga tgggctacgc atgcctggtg ggggataaag taatgaaacc
agcacatgtg 420aagggaacta tcgacaatgc cgatctggct aaactggcct ttaagcggtc
gtctaaatac 480gatcttgaat gtgcacagat accggtgcac atgaagtctg atgcctcgaa
gtttacccac 540gagaaacccg aggggtacta taactggcat cacggagcag tgcagtattc
aggaggccgg 600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg gcagaccgat
cttcgacaac 660aaaggacggg tggtggccat cgtcctagga ggggccaacg aaggtgcccg
cacggccctc 720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta cccctgaggg
agccgaagag 780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc
ctgctctcag 840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg
catgcttgag 900gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac
ttgctctccc 960caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac
aagaccatat 1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat
cgcattggag 1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt
gcagatcggg 1140ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag
ccatacgcca 1200gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac
gatcaccggg 1260accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac
agtgggattt 1320acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga
accacctgtg 1380ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc
ttgcagcacg 1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc
cccagatact 1500cctgaccgca cgctgatgac gcagcagtct ggcaacgtga agatcacagt
taatgggcag 1560acggtgcggt acaagtgcaa ctgcggtggc tccggaagtg gatccaacga
gggactgaca 1620accacagaca aagtgatcaa taactgcaaa attgatcagt gccatgctgc
agtcactaat 1680cacaagaatt ggcaatacaa ctccccttta gtcccgcgca acgctgaact
cggggaccgt 1740aaaggaaaga tccacatccc attcccattg gcaaacgtga cttgcagagt
gccaaaagca 1800agaaacccta cagtaactta cggaaaaaac caagtcacca tgctgctgta
tcctgaccat 1860ccgacactct tgtcttaccg taacatggga caggaaccaa attaccacga
ggagtgggtg 1920acacacaaga aggaggttac cttgaccgtg cctactgagg gtctggaggt
cacttggggc 1980aacaacgaac catacaagta ctggccgcag atgtctacga acggtactgc
tcatggtcac 2040ccacatgaga taatcttgta ctattatgag ctgtacccca ctatgactgt
agtcattgtg 2100tcggtggcct cgttcgtgct tctgtcgatg gtgggcacag cagtgggaat
gtgtgtgtgc 2160gcacggcgca gatgcattac accatatgaa ttaacaccag gagccactgt
tcccttcctg 2220ctcagcctgc tatgctgcgt cagaacgacc aaggcggcca catattacga
ggctgcggca 2280tatctatgga acgaacagca gcccctgttc tggttgcagg ctcttatccc
gctggccgcc 2340ttgatcgtcc tgtgcaactg tctgaaactc ttgccatgct gctgtaagac
cctggctttt 2400ttagccgtaa tgagcatcgg tgcccacact gtgagcgcgt acgaacacgt
aacagtgatc 2460ccgaacacgg tgggagtacc gtataagact cttgtcaaca gaccgggtta
cagccccatg 2520gtgttggaga tggagctaca atcagtcacc ttggaaccaa cactgtcact
tgactacatc 2580acgtgcgagt acaaaactgt catcccctcc ccgtacgtga agtgctgtgg
tacagcagag 2640tgcaaggaca agagcctacc agactacagc tgcaaggtct ttactggagt
ctacccattt 2700atgtggggcg gcgcctactg cttttgcgac gccgaaaata cgcaattgag
cgaggcacat 2760gtagagaaat ctgaatcttg caaaacagag tttgcatcgg cctacagagc
ccacaccgca 2820tcggcgtcgg cgaagctccg cgtcctttac caaggaaaca acattaccgt
agctgcctac 2880gctaacggtg accatgccgt cacagtaaag gacgccaagt ttgtcgtggg
cccaatgtcc 2940tccgcctgga caccttttga caacaaaatc gtggtgtaca aaggcgacgt
ctacaacatg 3000gactacccac cttttggcgc aggaagacca ggacaatttg gtgacattca
aagtcgtaca 3060ccggaaagta aagacgttta tgccaacact cagttggtac tacagaggcc
agcagcaggc 3120acggtacatg taccatactc tcaggcacca tctggcttca agtattggct
gaaggaacga 3180ggagcatcgc tacagcacac ggcaccgttc ggttgccaga ttgcgacaaa
cccggtaaga 3240gctgtaaatt gcgctgtggg gaacatacca atttccatcg acataccgga
tgcggccttt 3300actagggttg tcgatgcacc ctctgtaacg gacatgtcat gcgaagtacc
agcctgcact 3360cactcctccg actttggggg cgtcgccatc atcaaataca cagctagcaa
gaaaggtaaa 3420tgtgcagtac attcgatgac caacgccgtt accattcgag aagccgacgt
agaagtagag 3480gggaactccc agctgcaaat atccttctca acagccctgg caagcgccga
gtttcgcgtg 3540caagtgtgct ccacacaagt acactgcgca gccgcatgcc accctccaaa
ggaccacata 3600gtcaattacc cagcatcaca caccaccctt ggggtccagg atatatccac
aacggcaatg 3660tcttgggtgc agaagattac gggaggagta ggattaattg ttgctgttgc
tgccttaatt 3720ttaattgtgg tgctatgcgt gtcgtttagc aggcac
3756161252PRTArtificial SequenceSynthetic vector VLP_CHI 532
-CHIKV VLP 16Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln
Pro1 5 10 15Arg Pro Trp
Ala Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro 20
25 30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala
Gln Leu Ile Ser Ala Val 35 40
45Asn Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60Arg Lys Asn Lys Lys Gln Arg Gln Lys
Lys Gln Ala Pro Gln Asn Asp65 70 75
80Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln
Lys Lys 85 90 95Lys Lys
Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp 100
105 110Cys Ile Phe Glu Val Lys His Glu Gly
Lys Val Met Gly Tyr Ala Cys 115 120
125Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile
130 135 140Asp Asn Ala Asp Leu Ala Lys
Leu Ala Phe Lys Arg Ser Ser Lys Tyr145 150
155 160Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys
Ser Asp Ala Ser 165 170
175Lys Phe Thr His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly
180 185 190Ala Val Gln Tyr Ser Gly
Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly 195 200
205Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly
Arg Val 210 215 220Val Ala Ile Val Leu
Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu225 230
235 240Ser Val Val Thr Trp Asn Lys Asp Ile Val
Thr Lys Ile Thr Pro Glu 245 250
255Gly Ala Glu Glu Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala
260 265 270Asn Thr Thr Phe Pro
Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys Tyr 275
280 285Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu
Asp Asn Val Met 290 295 300Arg Pro Gly
Tyr Tyr Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro305
310 315 320His Arg Gln Arg Arg Ser Thr
Lys Asp Asn Phe Asn Val Tyr Lys Ala 325
330 335Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly
Glu Gly His Ser 340 345 350Cys
His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365Gly Thr Leu Lys Ile Gln Val Ser Leu
Gln Ile Gly Ile Lys Thr Asp 370 375
380Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro385
390 395 400Ala Asp Ala Glu
Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys 405
410 415Thr Ile Thr Gly Thr Met Gly His Phe Ile
Leu Ala Arg Cys Pro Lys 420 425
430Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys Ile Ser His
435 440 445Thr Cys Thr His Pro Phe His
His Glu Pro Pro Val Ile Gly Arg Glu 450 455
460Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser
Thr465 470 475 480Tyr Val
Gln Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met
485 490 495Pro Pro Asp Thr Pro Asp Arg
Thr Leu Met Thr Gln Gln Ser Gly Asn 500 505
510Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys
Asn Cys 515 520 525Gly Gly Ser Gly
Ser Gly Ser Asn Glu Gly Leu Thr Thr Thr Asp Lys 530
535 540Val Ile Asn Asn Cys Lys Ile Asp Gln Cys His Ala
Ala Val Thr Asn545 550 555
560His Lys Asn Trp Gln Tyr Asn Ser Pro Leu Val Pro Arg Asn Ala Glu
565 570 575Leu Gly Asp Arg Lys
Gly Lys Ile His Ile Pro Phe Pro Leu Ala Asn 580
585 590Val Thr Cys Arg Val Pro Lys Ala Arg Asn Pro Thr
Val Thr Tyr Gly 595 600 605Lys Asn
Gln Val Thr Met Leu Leu Tyr Pro Asp His Pro Thr Leu Leu 610
615 620Ser Tyr Arg Asn Met Gly Gln Glu Pro Asn Tyr
His Glu Glu Trp Val625 630 635
640Thr His Lys Lys Glu Val Thr Leu Thr Val Pro Thr Glu Gly Leu Glu
645 650 655Val Thr Trp Gly
Asn Asn Glu Pro Tyr Lys Tyr Trp Pro Gln Met Ser 660
665 670Thr Asn Gly Thr Ala His Gly His Pro His Glu
Ile Ile Leu Tyr Tyr 675 680 685Tyr
Glu Leu Tyr Pro Thr Met Thr Val Val Ile Val Ser Val Ala Ser 690
695 700Phe Val Leu Leu Ser Met Val Gly Thr Ala
Val Gly Met Cys Val Cys705 710 715
720Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly Ala
Thr 725 730 735Val Pro Phe
Leu Leu Ser Leu Leu Cys Cys Val Arg Thr Thr Lys Ala 740
745 750Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr Leu
Trp Asn Glu Gln Gln Pro 755 760
765Leu Phe Trp Leu Gln Ala Leu Ile Pro Leu Ala Ala Leu Ile Val Leu 770
775 780Cys Asn Cys Leu Lys Leu Leu Pro
Cys Cys Cys Lys Thr Leu Ala Phe785 790
795 800Leu Ala Val Met Ser Ile Gly Ala His Thr Val Ser
Ala Tyr Glu His 805 810
815Val Thr Val Ile Pro Asn Thr Val Gly Val Pro Tyr Lys Thr Leu Val
820 825 830Asn Arg Pro Gly Tyr Ser
Pro Met Val Leu Glu Met Glu Leu Gln Ser 835 840
845Val Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys
Glu Tyr 850 855 860Lys Thr Val Ile Pro
Ser Pro Tyr Val Lys Cys Cys Gly Thr Ala Glu865 870
875 880Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser
Cys Lys Val Phe Thr Gly 885 890
895Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp Ala Glu
900 905 910Asn Thr Gln Leu Ser
Glu Ala His Val Glu Lys Ser Glu Ser Cys Lys 915
920 925Thr Glu Phe Ala Ser Ala Tyr Arg Ala His Thr Ala
Ser Ala Ser Ala 930 935 940Lys Leu Arg
Val Leu Tyr Gln Gly Asn Asn Ile Thr Val Ala Ala Tyr945
950 955 960Ala Asn Gly Asp His Ala Val
Thr Val Lys Asp Ala Lys Phe Val Val 965
970 975Gly Pro Met Ser Ser Ala Trp Thr Pro Phe Asp Asn
Lys Ile Val Val 980 985 990Tyr
Lys Gly Asp Val Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly 995
1000 1005Arg Pro Gly Gln Phe Gly Asp Ile
Gln Ser Arg Thr Pro Glu Ser 1010 1015
1020Lys Asp Val Tyr Ala Asn Thr Gln Leu Val Leu Gln Arg Pro Ala
1025 1030 1035Ala Gly Thr Val His Val
Pro Tyr Ser Gln Ala Pro Ser Gly Phe 1040 1045
1050Lys Tyr Trp Leu Lys Glu Arg Gly Ala Ser Leu Gln His Thr
Ala 1055 1060 1065Pro Phe Gly Cys Gln
Ile Ala Thr Asn Pro Val Arg Ala Val Asn 1070 1075
1080Cys Ala Val Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro
Asp Ala 1085 1090 1095Ala Phe Thr Arg
Val Val Asp Ala Pro Ser Val Thr Asp Met Ser 1100
1105 1110Cys Glu Val Pro Ala Cys Thr His Ser Ser Asp
Phe Gly Gly Val 1115 1120 1125Ala Ile
Ile Lys Tyr Thr Ala Ser Lys Lys Gly Lys Cys Ala Val 1130
1135 1140His Ser Met Thr Asn Ala Val Thr Ile Arg
Glu Ala Asp Val Glu 1145 1150 1155Val
Glu Gly Asn Ser Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu 1160
1165 1170Ala Ser Ala Glu Phe Arg Val Gln Val
Cys Ser Thr Gln Val His 1175 1180
1185Cys Ala Ala Ala Cys His Pro Pro Lys Asp His Ile Val Asn Tyr
1190 1195 1200Pro Ala Ser His Thr Thr
Leu Gly Val Gln Asp Ile Ser Thr Thr 1205 1210
1215Ala Met Ser Trp Val Gln Lys Ile Thr Gly Gly Val Gly Leu
Ile 1220 1225 1230Val Ala Val Ala Ala
Leu Ile Leu Ile Val Val Leu Cys Val Ser 1235 1240
1245Phe Ser Arg His 1250173777DNAArtificial
SequenceSynthetic vector VLP_VEEV VLP 518 -VEEV VLP 17atgttcccgt
tccagccaat gtatccgatg cagccaatgc cctatcgcaa cccgttcgcg 60gccccgcgca
ggccctggtt ccccagaacc gacccttttc tggcgatgca ggtgcaggaa 120ttaacccgct
cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc acctgagggg 180ccatccgcta
ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg aggccaaggg 240aagaagaaga
agaaccaagg gaagaagaag gctaagacag ggccgcctaa tccgaaggca 300cagaatggaa
acaagaagaa gaccaacaag aaaccaggca agagacagcg catggtcatg 360aaattggaat
ctgacaagac gttcccaatc atgttggaag ggaagataaa cggctacgct 420tgtgtggtcg
gagggaagtt attcaggccg atgcatgtgg aaggcaagat cgacaacgac 480gttctggccg
cgcttaagac gaagaaagca tccaaatacg atcttgagta tgcagatgtg 540ccacagaaca
tgcgggccga tacattcaaa tacacccatg agaaacccca aggctattac 600agctggcatc
atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc gaaaggagtt 660ggggccaagg
gagacagcgg acgacccatt ctggataacc agggacgggt ggtcgctatt 720gtgctgggag
gtgtgaatga aggatctagg acagcccttt cagtcgtcat gtggaacgag 780aagggagtta
ccgtgaagta tactccagag aactgcgagc aatggtcact agtgaccacc 840atgtgtctgc
tcgccaatgt gacgttccca tgtgctcaac caccaatttg ctacgacaga 900aaaccagcag
agactttggc catgctcagc gttaacgttg acaacccggg ctacgatgag 960ctgctggaag
cagctgttaa gtgccccgga aggaaaagga gatccaccga ggagctgttt 1020aatgagtata
agctaacgcg cccttacatg gccagatgca tcagatgtgc agttgggagc 1080tgccatagtc
caatagcaat cgaggcagta aagagcgacg ggcacgacgg ttatgttaga 1140cttcagactt
cctcgcagta tggcctggat tcctccggca acttaaaggg caggaccatg 1200cggtatgaca
tgcacgggac cattaaagag ataccactac atcaagtgtc actctataca 1260tctcgcccgt
gtcacattgt ggatgggcac ggttatttcc tgcttgccag gtgcccggca 1320ggggactcca
tcaccatgga atttaagaaa gattccgtca gacactcctg ctcggtgccg 1380tatgaagtga
aatttaatcc tgtaggcaga gaactctata ctcatccccc agaacacgga 1440gtagagcaag
cgtgccaagt ctacgcacat gatgcacaga acagaggagc ttatgtcgag 1500atgcacctcc
cgggctcaga agtggacagc agtttggttt ccttgagcgg ctccggagga 1560tccagttcag
tcaccgtgac acctcctgat gggactagcg ccctggtgga atgcgagtgt 1620ggcggcacaa
agatctccga gaccatcaac aagacaaaac agttcagcca gtgcacaaag 1680aaggagcagt
gcagagcata tcggctgcag aacgataagt gggtgtataa ttctgacaaa 1740ctgcccaaag
cagcgggagc caccttaaaa ggaaaactgc atgtcccatt cttgctggca 1800gacggcaaat
gcaccgtgcc tctagcacca gaacctatga taaccttcgg tttcagatca 1860gtgtcactga
aactgcaccc taagaatccc acatatctaa tcacccgcca acttgctgat 1920gagcctcact
acacgcacga gctcatatct gaaccagctg ttaggaattt taccgtcacc 1980gaaaaagggt
gggagtttgt atggggaaac cacccgccga aaaggttttg ggcacaggaa 2040acagcacccg
gaaatccaca tgggctaccg cacgaggtga taactcatta ttaccacaga 2100taccctatgt
ccaccatcct gggtttgtca atttgtgccg ccattgcaac cgtttccgtt 2160gcagcgtcta
cctggctgtt ttgcagatca agagttgcgt gcctaactcc ttaccggcta 2220acacctaacg
ctaggatacc attttgtctg gctgtgcttt gctgcgcccg cactgcccgg 2280gccgagacca
cctgggagtc cttggatcac ctatggaaca ataaccaaca gatgttctgg 2340attcaattgc
tgatccctct ggccgccttg atcgtagtga ctcgcctgct caggtgcgtg 2400tgctgtgtcg
tgcctttttt agtcatggcc ggcgccgcag gcgccggcgc ctacgagcac 2460gcgaccacga
tgccgagcca agcgggaatc tcgtataaca ctatagtcaa cagagcaggc 2520tacgcaccac
tccctatcag cataacacca acaaagatca agctgatacc tacagtgaac 2580ttggagtacg
tcacctgcca ctacaaaaca ggaatggatt caccagccat caaatgctgc 2640ggatctcagg
aatgcactcc aacttacagg cctgatgaac agtgcaaagt cttcacaggg 2700gtttacccgt
tcatgtgggg tggtgcatat tgcttttgcg acactgagaa cacccaagtc 2760agcaaggcct
acgtaatgaa atctgacgac tgccttgcgg atcatgctga agcatataaa 2820gcgcacacag
cctcagtgca ggcgttcctc aacatcacag tgggagaaca ctctattgtg 2880actaccgtgt
atgtgaatgg agaaactcct gtgaatttca atggggtcaa aataactgca 2940ggtccgcttt
ccacagcttg gacacccttt gatcgcaaaa tcgtgcagta tgccggggag 3000atctataatt
atgattttcc tgagtatggg gcaggacaac caggagcatt tggagatata 3060caatccagaa
cagtctcaag ctctgatctg tatgccaata ccaacctagt gctgcagaga 3120cccaaagcag
gagcgatcca cgtgccatac actcaggcac cttcgggttt tgagcaatgg 3180aagaaagata
aagctccatc attgaaattt accgcccctt tcggatgcga aatatataca 3240aaccccattc
gcgccgaaaa ctgtgctgta gggtcaattc cattagcctt tgacattccc 3300gacgccttgt
tcaccagggt gtcagaaaca ccgacacttt cagcggccga atgcactctt 3360aacgagtgcg
tgtattcttc cgactttggt gggatcgcca cggtcaagta ctcggccagc 3420aagtcaggca
agtgcgcagt ccatgtgcca tcagggactg ctaccctaaa agaagcagca 3480gtcgagctaa
ccgagcaagg gtcggcgact atccatttct cgaccgcaaa tatccacccg 3540gagttcaggc
tccaaatatg cacatcatat gttacgtgca aaggtgattg tcaccccccg 3600aaagaccata
ttgtgacaca ccctcagtat cacgcccaaa catttacagc cgcggtgtca 3660aaaaccgcgt
ggacgtggtt aacatccctg ctgggaggat cagccgtaat tattataatt 3720ggcttggtgc
tggctactat tgtggccatg tacgtgctga ccaaccagaa acataat
3777181259PRTArtificial SequenceSynthetic vector VLP_VEEV VLP 518 -VEEV
VLP 18Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg1
5 10 15Asn Pro Phe Ala Ala
Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser
Met Ala Asn Leu 35 40 45Thr Phe
Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys
Gly Gly Gly Gln Gly65 70 75
80Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro
85 90 95Asn Pro Lys Ala Gln
Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110Gly Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser
Asp Lys Thr Phe 115 120 125Pro Ile
Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130
135 140Gly Lys Leu Phe Arg Pro Met His Val Glu Gly
Lys Ile Asp Asn Asp145 150 155
160Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175Tyr Ala Asp Val
Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr 180
185 190His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His
His Gly Ala Val Gln 195 200 205Tyr
Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln
Gly Arg Val Val Ala Ile225 230 235
240Val Leu Gly Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val
Val 245 250 255Met Trp Asn
Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys 260
265 270Glu Gln Trp Ser Leu Val Thr Thr Met Cys
Leu Leu Ala Asn Val Thr 275 280
285Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290
295 300Thr Leu Ala Met Leu Ser Val Asn
Val Asp Asn Pro Gly Tyr Asp Glu305 310
315 320Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys
Arg Arg Ser Thr 325 330
335Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg
340 345 350Cys Ile Arg Cys Ala Val
Gly Ser Cys His Ser Pro Ile Ala Ile Glu 355 360
365Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg Leu Gln
Thr Ser 370 375 380Ser Gln Tyr Gly Leu
Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met385 390
395 400Arg Tyr Asp Met His Gly Thr Ile Lys Glu
Ile Pro Leu His Gln Val 405 410
415Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp Gly His Gly Tyr
420 425 430Phe Leu Leu Ala Arg
Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe 435
440 445Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro
Tyr Glu Val Lys 450 455 460Phe Asn Pro
Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly465
470 475 480Val Glu Gln Ala Cys Gln Val
Tyr Ala His Asp Ala Gln Asn Arg Gly 485
490 495Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val
Asp Ser Ser Leu 500 505 510Val
Ser Leu Ser Gly Ser Gly Gly Ser Ser Ser Val Thr Val Thr Pro 515
520 525Pro Asp Gly Thr Ser Ala Leu Val Glu
Cys Glu Cys Gly Gly Thr Lys 530 535
540Ile Ser Glu Thr Ile Asn Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys545
550 555 560Lys Glu Gln Cys
Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr 565
570 575Asn Ser Asp Lys Leu Pro Lys Ala Ala Gly
Ala Thr Leu Lys Gly Lys 580 585
590Leu His Val Pro Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu
595 600 605Ala Pro Glu Pro Met Ile Thr
Phe Gly Phe Arg Ser Val Ser Leu Lys 610 615
620Leu His Pro Lys Asn Pro Thr Tyr Leu Ile Thr Arg Gln Leu Ala
Asp625 630 635 640Glu Pro
His Tyr Thr His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn
645 650 655Phe Thr Val Thr Glu Lys Gly
Trp Glu Phe Val Trp Gly Asn His Pro 660 665
670Pro Lys Arg Phe Trp Ala Gln Glu Thr Ala Pro Gly Asn Pro
His Gly 675 680 685Leu Pro His Glu
Val Ile Thr His Tyr Tyr His Arg Tyr Pro Met Ser 690
695 700Thr Ile Leu Gly Leu Ser Ile Cys Ala Ala Ile Ala
Thr Val Ser Val705 710 715
720Ala Ala Ser Thr Trp Leu Phe Cys Arg Ser Arg Val Ala Cys Leu Thr
725 730 735Pro Tyr Arg Leu Thr
Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val 740
745 750Leu Cys Cys Ala Arg Thr Ala Arg Ala Glu Thr Thr
Trp Glu Ser Leu 755 760 765Asp His
Leu Trp Asn Asn Asn Gln Gln Met Phe Trp Ile Gln Leu Leu 770
775 780Ile Pro Leu Ala Ala Leu Ile Val Val Thr Arg
Leu Leu Arg Cys Val785 790 795
800Cys Cys Val Val Pro Phe Leu Val Met Ala Gly Ala Ala Gly Ala Gly
805 810 815Ala Tyr Glu His
Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr 820
825 830Asn Thr Ile Val Asn Arg Ala Gly Tyr Ala Pro
Leu Pro Ile Ser Ile 835 840 845Thr
Pro Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu Glu Tyr Val 850
855 860Thr Cys His Tyr Lys Thr Gly Met Asp Ser
Pro Ala Ile Lys Cys Cys865 870 875
880Gly Ser Gln Glu Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys
Lys 885 890 895Val Phe Thr
Gly Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe 900
905 910Cys Asp Thr Glu Asn Thr Gln Val Ser Lys
Ala Tyr Val Met Lys Ser 915 920
925Asp Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala 930
935 940Ser Val Gln Ala Phe Leu Asn Ile
Thr Val Gly Glu His Ser Ile Val945 950
955 960Thr Thr Val Tyr Val Asn Gly Glu Thr Pro Val Asn
Phe Asn Gly Val 965 970
975Lys Ile Thr Ala Gly Pro Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg
980 985 990Lys Ile Val Gln Tyr Ala
Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu 995 1000
1005Tyr Gly Ala Gly Gln Pro Gly Ala Phe Gly Asp Ile
Gln Ser Arg 1010 1015 1020Thr Val Ser
Ser Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu 1025
1030 1035Gln Arg Pro Lys Ala Gly Ala Ile His Val Pro
Tyr Thr Gln Ala 1040 1045 1050Pro Ser
Gly Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu 1055
1060 1065Lys Phe Thr Ala Pro Phe Gly Cys Glu Ile
Tyr Thr Asn Pro Ile 1070 1075 1080Arg
Ala Glu Asn Cys Ala Val Gly Ser Ile Pro Leu Ala Phe Asp 1085
1090 1095Ile Pro Asp Ala Leu Phe Thr Arg Val
Ser Glu Thr Pro Thr Leu 1100 1105
1110Ser Ala Ala Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp
1115 1120 1125Phe Gly Gly Ile Ala Thr
Val Lys Tyr Ser Ala Ser Lys Ser Gly 1130 1135
1140Lys Cys Ala Val His Val Pro Ser Gly Thr Ala Thr Leu Lys
Glu 1145 1150 1155Ala Ala Val Glu Leu
Thr Glu Gln Gly Ser Ala Thr Ile His Phe 1160 1165
1170Ser Thr Ala Asn Ile His Pro Glu Phe Arg Leu Gln Ile
Cys Thr 1175 1180 1185Ser Tyr Val Thr
Cys Lys Gly Asp Cys His Pro Pro Lys Asp His 1190
1195 1200Ile Val Thr His Pro Gln Tyr His Ala Gln Thr
Phe Thr Ala Ala 1205 1210 1215Val Ser
Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly 1220
1225 1230Ser Ala Val Ile Ile Ile Ile Gly Leu Val
Leu Ala Thr Ile Val 1235 1240 1245Ala
Met Tyr Val Leu Thr Asn Gln Lys His Asn 1250
1255193777DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 519 -VEEV
VLP 19atgttcccgt tccagccaat gtatccgatg cagccaatgc cctatcgcaa cccgttcgcg
60gccccgcgca ggccctggtt ccccagaacc gacccttttc tggcgatgca ggtgcaggaa
120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc acctgagggg
180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg aggccaaggg
240aagaagaaga agaaccaagg gaagaagaag gctaagacag ggccgcctaa tccgaaggca
300cagaatggaa acaagaagaa gaccaacaag aaaccaggca agagacagcg catggtcatg
360aaattggaat ctgacaagac gttcccaatc atgttggaag ggaagataaa cggctacgct
420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg aaggcaagat cgacaacgac
480gttctggccg cgcttaagac gaagaaagca tccaaatacg atcttgagta tgcagatgtg
540ccacagaaca tgcgggccga tacattcaaa tacacccatg agaaacccca aggctattac
600agctggcatc atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc gaaaggagtt
660ggggccaagg gagacagcgg acgacccatt ctggataacc agggacgggt ggtcgctatt
720gtgctgggag gtgtgaatga aggatctagg acagcccttt cagtcgtcat gtggaacgag
780aagggagtta ccgtgaagta tactccagag aactgcgagc aatggtcact agtgaccacc
840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac caccaatttg ctacgacaga
900aaaccagcag agactttggc catgctcagc gttaacgttg acaacccggg ctacgatgag
960ctgctggaag cagctgttaa gtgccccgga aggaaaagga gatccaccga ggagctgttt
1020aatgagtata agctaacgcg cccttacatg gccagatgca tcagatgtgc agttgggagc
1080tgccatagtc caatagcaat cgaggcagta aagagcgacg ggcacgacgg ttatgttaga
1140cttcagactt cctcgcagta tggcctggat tcctccggca acttaaaggg caggaccatg
1200cggtatgaca tgcacgggac cattaaagag ataccactac atcaagtgtc actctataca
1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc tgcttgccag gtgcccggca
1320ggggactcca tcaccatgga atttaagaaa gattccgtca gacactcctg ctcggtgccg
1380tatgaagtga aatttaatcc tgtaggcaga gaactctata ctcatccccc agaacacgga
1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga acagaggagc ttatgtcgag
1500atgcacctcc cgggctcaga agtggacagc agtttggttt ccttgagcgg cagttccgga
1560ggatcctcag tcaccgtgac acctcctgat gggactagcg ccctggtgga atgcgagtgt
1620ggcggcacaa agatctccga gaccatcaac aagacaaaac agttcagcca gtgcacaaag
1680aaggagcagt gcagagcata tcggctgcag aacgataagt gggtgtataa ttctgacaaa
1740ctgcccaaag cagcgggagc caccttaaaa ggaaaactgc atgtcccatt cttgctggca
1800gacggcaaat gcaccgtgcc tctagcacca gaacctatga taaccttcgg tttcagatca
1860gtgtcactga aactgcaccc taagaatccc acatatctaa tcacccgcca acttgctgat
1920gagcctcact acacgcacga gctcatatct gaaccagctg ttaggaattt taccgtcacc
1980gaaaaagggt gggagtttgt atggggaaac cacccgccga aaaggttttg ggcacaggaa
2040acagcacccg gaaatccaca tgggctaccg cacgaggtga taactcatta ttaccacaga
2100taccctatgt ccaccatcct gggtttgtca atttgtgccg ccattgcaac cgtttccgtt
2160gcagcgtcta cctggctgtt ttgcagatca agagttgcgt gcctaactcc ttaccggcta
2220acacctaacg ctaggatacc attttgtctg gctgtgcttt gctgcgcccg cactgcccgg
2280gccgagacca cctgggagtc cttggatcac ctatggaaca ataaccaaca gatgttctgg
2340attcaattgc tgatccctct ggccgccttg atcgtagtga ctcgcctgct caggtgcgtg
2400tgctgtgtcg tgcctttttt agtcatggcc ggcgccgcag gcgccggcgc ctacgagcac
2460gcgaccacga tgccgagcca agcgggaatc tcgtataaca ctatagtcaa cagagcaggc
2520tacgcaccac tccctatcag cataacacca acaaagatca agctgatacc tacagtgaac
2580ttggagtacg tcacctgcca ctacaaaaca ggaatggatt caccagccat caaatgctgc
2640ggatctcagg aatgcactcc aacttacagg cctgatgaac agtgcaaagt cttcacaggg
2700gtttacccgt tcatgtgggg tggtgcatat tgcttttgcg acactgagaa cacccaagtc
2760agcaaggcct acgtaatgaa atctgacgac tgccttgcgg atcatgctga agcatataaa
2820gcgcacacag cctcagtgca ggcgttcctc aacatcacag tgggagaaca ctctattgtg
2880actaccgtgt atgtgaatgg agaaactcct gtgaatttca atggggtcaa aataactgca
2940ggtccgcttt ccacagcttg gacacccttt gatcgcaaaa tcgtgcagta tgccggggag
3000atctataatt atgattttcc tgagtatggg gcaggacaac caggagcatt tggagatata
3060caatccagaa cagtctcaag ctctgatctg tatgccaata ccaacctagt gctgcagaga
3120cccaaagcag gagcgatcca cgtgccatac actcaggcac cttcgggttt tgagcaatgg
3180aagaaagata aagctccatc attgaaattt accgcccctt tcggatgcga aatatataca
3240aaccccattc gcgccgaaaa ctgtgctgta gggtcaattc cattagcctt tgacattccc
3300gacgccttgt tcaccagggt gtcagaaaca ccgacacttt cagcggccga atgcactctt
3360aacgagtgcg tgtattcttc cgactttggt gggatcgcca cggtcaagta ctcggccagc
3420aagtcaggca agtgcgcagt ccatgtgcca tcagggactg ctaccctaaa agaagcagca
3480gtcgagctaa ccgagcaagg gtcggcgact atccatttct cgaccgcaaa tatccacccg
3540gagttcaggc tccaaatatg cacatcatat gttacgtgca aaggtgattg tcaccccccg
3600aaagaccata ttgtgacaca ccctcagtat cacgcccaaa catttacagc cgcggtgtca
3660aaaaccgcgt ggacgtggtt aacatccctg ctgggaggat cagccgtaat tattataatt
3720ggcttggtgc tggctactat tgtggccatg tacgtgctga ccaaccagaa acataat
3777201259PRTArtificial SequenceSynthetic vector VLP_VEEV VLP 519 -VEEV
VLP 20Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg1
5 10 15Asn Pro Phe Ala Ala
Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser
Met Ala Asn Leu 35 40 45Thr Phe
Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys
Gly Gly Gly Gln Gly65 70 75
80Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro
85 90 95Asn Pro Lys Ala Gln
Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110Gly Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser
Asp Lys Thr Phe 115 120 125Pro Ile
Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130
135 140Gly Lys Leu Phe Arg Pro Met His Val Glu Gly
Lys Ile Asp Asn Asp145 150 155
160Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175Tyr Ala Asp Val
Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr 180
185 190His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His
His Gly Ala Val Gln 195 200 205Tyr
Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln
Gly Arg Val Val Ala Ile225 230 235
240Val Leu Gly Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val
Val 245 250 255Met Trp Asn
Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys 260
265 270Glu Gln Trp Ser Leu Val Thr Thr Met Cys
Leu Leu Ala Asn Val Thr 275 280
285Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290
295 300Thr Leu Ala Met Leu Ser Val Asn
Val Asp Asn Pro Gly Tyr Asp Glu305 310
315 320Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys
Arg Arg Ser Thr 325 330
335Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg
340 345 350Cys Ile Arg Cys Ala Val
Gly Ser Cys His Ser Pro Ile Ala Ile Glu 355 360
365Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg Leu Gln
Thr Ser 370 375 380Ser Gln Tyr Gly Leu
Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met385 390
395 400Arg Tyr Asp Met His Gly Thr Ile Lys Glu
Ile Pro Leu His Gln Val 405 410
415Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp Gly His Gly Tyr
420 425 430Phe Leu Leu Ala Arg
Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe 435
440 445Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro
Tyr Glu Val Lys 450 455 460Phe Asn Pro
Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly465
470 475 480Val Glu Gln Ala Cys Gln Val
Tyr Ala His Asp Ala Gln Asn Arg Gly 485
490 495Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val
Asp Ser Ser Leu 500 505 510Val
Ser Leu Ser Gly Ser Ser Gly Gly Ser Ser Val Thr Val Thr Pro 515
520 525Pro Asp Gly Thr Ser Ala Leu Val Glu
Cys Glu Cys Gly Gly Thr Lys 530 535
540Ile Ser Glu Thr Ile Asn Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys545
550 555 560Lys Glu Gln Cys
Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr 565
570 575Asn Ser Asp Lys Leu Pro Lys Ala Ala Gly
Ala Thr Leu Lys Gly Lys 580 585
590Leu His Val Pro Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu
595 600 605Ala Pro Glu Pro Met Ile Thr
Phe Gly Phe Arg Ser Val Ser Leu Lys 610 615
620Leu His Pro Lys Asn Pro Thr Tyr Leu Ile Thr Arg Gln Leu Ala
Asp625 630 635 640Glu Pro
His Tyr Thr His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn
645 650 655Phe Thr Val Thr Glu Lys Gly
Trp Glu Phe Val Trp Gly Asn His Pro 660 665
670Pro Lys Arg Phe Trp Ala Gln Glu Thr Ala Pro Gly Asn Pro
His Gly 675 680 685Leu Pro His Glu
Val Ile Thr His Tyr Tyr His Arg Tyr Pro Met Ser 690
695 700Thr Ile Leu Gly Leu Ser Ile Cys Ala Ala Ile Ala
Thr Val Ser Val705 710 715
720Ala Ala Ser Thr Trp Leu Phe Cys Arg Ser Arg Val Ala Cys Leu Thr
725 730 735Pro Tyr Arg Leu Thr
Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val 740
745 750Leu Cys Cys Ala Arg Thr Ala Arg Ala Glu Thr Thr
Trp Glu Ser Leu 755 760 765Asp His
Leu Trp Asn Asn Asn Gln Gln Met Phe Trp Ile Gln Leu Leu 770
775 780Ile Pro Leu Ala Ala Leu Ile Val Val Thr Arg
Leu Leu Arg Cys Val785 790 795
800Cys Cys Val Val Pro Phe Leu Val Met Ala Gly Ala Ala Gly Ala Gly
805 810 815Ala Tyr Glu His
Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr 820
825 830Asn Thr Ile Val Asn Arg Ala Gly Tyr Ala Pro
Leu Pro Ile Ser Ile 835 840 845Thr
Pro Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu Glu Tyr Val 850
855 860Thr Cys His Tyr Lys Thr Gly Met Asp Ser
Pro Ala Ile Lys Cys Cys865 870 875
880Gly Ser Gln Glu Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys
Lys 885 890 895Val Phe Thr
Gly Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe 900
905 910Cys Asp Thr Glu Asn Thr Gln Val Ser Lys
Ala Tyr Val Met Lys Ser 915 920
925Asp Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala 930
935 940Ser Val Gln Ala Phe Leu Asn Ile
Thr Val Gly Glu His Ser Ile Val945 950
955 960Thr Thr Val Tyr Val Asn Gly Glu Thr Pro Val Asn
Phe Asn Gly Val 965 970
975Lys Ile Thr Ala Gly Pro Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg
980 985 990Lys Ile Val Gln Tyr Ala
Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu 995 1000
1005Tyr Gly Ala Gly Gln Pro Gly Ala Phe Gly Asp Ile
Gln Ser Arg 1010 1015 1020Thr Val Ser
Ser Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu 1025
1030 1035Gln Arg Pro Lys Ala Gly Ala Ile His Val Pro
Tyr Thr Gln Ala 1040 1045 1050Pro Ser
Gly Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu 1055
1060 1065Lys Phe Thr Ala Pro Phe Gly Cys Glu Ile
Tyr Thr Asn Pro Ile 1070 1075 1080Arg
Ala Glu Asn Cys Ala Val Gly Ser Ile Pro Leu Ala Phe Asp 1085
1090 1095Ile Pro Asp Ala Leu Phe Thr Arg Val
Ser Glu Thr Pro Thr Leu 1100 1105
1110Ser Ala Ala Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp
1115 1120 1125Phe Gly Gly Ile Ala Thr
Val Lys Tyr Ser Ala Ser Lys Ser Gly 1130 1135
1140Lys Cys Ala Val His Val Pro Ser Gly Thr Ala Thr Leu Lys
Glu 1145 1150 1155Ala Ala Val Glu Leu
Thr Glu Gln Gly Ser Ala Thr Ile His Phe 1160 1165
1170Ser Thr Ala Asn Ile His Pro Glu Phe Arg Leu Gln Ile
Cys Thr 1175 1180 1185Ser Tyr Val Thr
Cys Lys Gly Asp Cys His Pro Pro Lys Asp His 1190
1195 1200Ile Val Thr His Pro Gln Tyr His Ala Gln Thr
Phe Thr Ala Ala 1205 1210 1215Val Ser
Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly 1220
1225 1230Ser Ala Val Ile Ile Ile Ile Gly Leu Val
Leu Ala Thr Ile Val 1235 1240 1245Ala
Met Tyr Val Leu Thr Asn Gln Lys His Asn 1250
1255213777DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 538 -VEEV
VLP 21atgttcccgt tccagccaat gtatccgatg cagccaatgc cctatcgcaa cccgttcgcg
60gccccgcgca ggccctggtt ccccagaacc gacccttttc tggcgatgca ggtgcaggaa
120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc acctgagggg
180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg aggccaaggg
240aagaagaaga agaaccaagg gaagaagaag gctaagacag ggccgcctaa tccgaaggca
300cagaatggaa acaagaagaa gaccaacaag aaaccaggca agagacagcg catggtcatg
360aaattggaat ctgacaagac gttcccaatc atgttggaag ggaagataaa cggctacgct
420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg aaggcaagat cgacaacgac
480gttctggccg cgcttaagac gaagaaagca tccaaatacg atcttgagta tgcagatgtg
540ccacagaaca tgcgggccga tacattcaaa tacacccatg agaaacccca aggctattac
600agctggcatc atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc gaaaggagtt
660ggggccaagg gagacagcgg acgacccatt ctggataacc agggacgggt ggtcgctatt
720gtgctgggag gtgtgaatga aggatctagg acagcccttt cagtcgtcat gtggaacgag
780aagggagtta ccgtgaagta tactccagag aactgcgagc aatggtcact agtgaccacc
840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac caccaatttg ctacgacaga
900aaaccagcag agactttggc catgctcagc gttaacgttg acaacccggg ctacgatgag
960ctgctggaag cagctgttaa gtgccccgga aggaaaagga gatccaccga ggagctgttt
1020aatgagtata agctaacgcg cccttacatg gccagatgca tcagatgtgc agttgggagc
1080tgccatagtc caatagcaat cgaggcagta aagagcgacg ggcacgacgg ttatgttaga
1140cttcagactt cctcgcagta tggcctggat tcctccggca acttaaaggg caggaccatg
1200cggtatgaca tgcacgggac cattaaagag ataccactac atcaagtgtc actctataca
1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc tgcttgccag gtgcccggca
1320ggggactcca tcaccatgga atttaagaaa gattccgtca gacactcctg ctcggtgccg
1380tatgaagtga aatttaatcc tgtaggcaga gaactctata ctcatccccc agaacacgga
1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga acagaggagc ttatgtcgag
1500atgcacctcc cgggctcaga agtggacagc agtttggttt ccttgagcgg cagttcagtc
1560accgtgacac ctcctgatgg gactagcgcc ctggtggaat gcgagtgtgg ctccggagga
1620tccggcacaa agatctccga gaccatcaac aagacaaaac agttcagcca gtgcacaaag
1680aaggagcagt gcagagcata tcggctgcag aacgataagt gggtgtataa ttctgacaaa
1740ctgcccaaag cagcgggagc caccttaaaa ggaaaactgc atgtcccatt cttgctggca
1800gacggcaaat gcaccgtgcc tctagcacca gaacctatga taaccttcgg tttcagatca
1860gtgtcactga aactgcaccc taagaatccc acatatctaa tcacccgcca acttgctgat
1920gagcctcact acacgcacga gctcatatct gaaccagctg ttaggaattt taccgtcacc
1980gaaaaagggt gggagtttgt atggggaaac cacccgccga aaaggttttg ggcacaggaa
2040acagcacccg gaaatccaca tgggctaccg cacgaggtga taactcatta ttaccacaga
2100taccctatgt ccaccatcct gggtttgtca atttgtgccg ccattgcaac cgtttccgtt
2160gcagcgtcta cctggctgtt ttgcagatca agagttgcgt gcctaactcc ttaccggcta
2220acacctaacg ctaggatacc attttgtctg gctgtgcttt gctgcgcccg cactgcccgg
2280gccgagacca cctgggagtc cttggatcac ctatggaaca ataaccaaca gatgttctgg
2340attcaattgc tgatccctct ggccgccttg atcgtagtga ctcgcctgct caggtgcgtg
2400tgctgtgtcg tgcctttttt agtcatggcc ggcgccgcag gcgccggcgc ctacgagcac
2460gcgaccacga tgccgagcca agcgggaatc tcgtataaca ctatagtcaa cagagcaggc
2520tacgcaccac tccctatcag cataacacca acaaagatca agctgatacc tacagtgaac
2580ttggagtacg tcacctgcca ctacaaaaca ggaatggatt caccagccat caaatgctgc
2640ggatctcagg aatgcactcc aacttacagg cctgatgaac agtgcaaagt cttcacaggg
2700gtttacccgt tcatgtgggg tggtgcatat tgcttttgcg acactgagaa cacccaagtc
2760agcaaggcct acgtaatgaa atctgacgac tgccttgcgg atcatgctga agcatataaa
2820gcgcacacag cctcagtgca ggcgttcctc aacatcacag tgggagaaca ctctattgtg
2880actaccgtgt atgtgaatgg agaaactcct gtgaatttca atggggtcaa aataactgca
2940ggtccgcttt ccacagcttg gacacccttt gatcgcaaaa tcgtgcagta tgccggggag
3000atctataatt atgattttcc tgagtatggg gcaggacaac caggagcatt tggagatata
3060caatccagaa cagtctcaag ctctgatctg tatgccaata ccaacctagt gctgcagaga
3120cccaaagcag gagcgatcca cgtgccatac actcaggcac cttcgggttt tgagcaatgg
3180aagaaagata aagctccatc attgaaattt accgcccctt tcggatgcga aatatataca
3240aaccccattc gcgccgaaaa ctgtgctgta gggtcaattc cattagcctt tgacattccc
3300gacgccttgt tcaccagggt gtcagaaaca ccgacacttt cagcggccga atgcactctt
3360aacgagtgcg tgtattcttc cgactttggt gggatcgcca cggtcaagta ctcggccagc
3420aagtcaggca agtgcgcagt ccatgtgcca tcagggactg ctaccctaaa agaagcagca
3480gtcgagctaa ccgagcaagg gtcggcgact atccatttct cgaccgcaaa tatccacccg
3540gagttcaggc tccaaatatg cacatcatat gttacgtgca aaggtgattg tcaccccccg
3600aaagaccata ttgtgacaca ccctcagtat cacgcccaaa catttacagc cgcggtgtca
3660aaaaccgcgt ggacgtggtt aacatccctg ctgggaggat cagccgtaat tattataatt
3720ggcttggtgc tggctactat tgtggccatg tacgtgctga ccaaccagaa acataat
3777221259PRTArtificial SequenceSynthetic vector VLP_VEEV VLP 538 -VEEV
VLP 22Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg1
5 10 15Asn Pro Phe Ala Ala
Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser
Met Ala Asn Leu 35 40 45Thr Phe
Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys
Gly Gly Gly Gln Gly65 70 75
80Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro
85 90 95Asn Pro Lys Ala Gln
Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110Gly Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser
Asp Lys Thr Phe 115 120 125Pro Ile
Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130
135 140Gly Lys Leu Phe Arg Pro Met His Val Glu Gly
Lys Ile Asp Asn Asp145 150 155
160Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175Tyr Ala Asp Val
Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr 180
185 190His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His
His Gly Ala Val Gln 195 200 205Tyr
Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln
Gly Arg Val Val Ala Ile225 230 235
240Val Leu Gly Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val
Val 245 250 255Met Trp Asn
Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys 260
265 270Glu Gln Trp Ser Leu Val Thr Thr Met Cys
Leu Leu Ala Asn Val Thr 275 280
285Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290
295 300Thr Leu Ala Met Leu Ser Val Asn
Val Asp Asn Pro Gly Tyr Asp Glu305 310
315 320Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys
Arg Arg Ser Thr 325 330
335Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg
340 345 350Cys Ile Arg Cys Ala Val
Gly Ser Cys His Ser Pro Ile Ala Ile Glu 355 360
365Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg Leu Gln
Thr Ser 370 375 380Ser Gln Tyr Gly Leu
Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met385 390
395 400Arg Tyr Asp Met His Gly Thr Ile Lys Glu
Ile Pro Leu His Gln Val 405 410
415Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp Gly His Gly Tyr
420 425 430Phe Leu Leu Ala Arg
Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe 435
440 445Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro
Tyr Glu Val Lys 450 455 460Phe Asn Pro
Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly465
470 475 480Val Glu Gln Ala Cys Gln Val
Tyr Ala His Asp Ala Gln Asn Arg Gly 485
490 495Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val
Asp Ser Ser Leu 500 505 510Val
Ser Leu Ser Gly Ser Ser Val Thr Val Thr Pro Pro Asp Gly Thr 515
520 525Ser Ala Leu Val Glu Cys Glu Cys Gly
Ser Gly Gly Ser Gly Thr Lys 530 535
540Ile Ser Glu Thr Ile Asn Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys545
550 555 560Lys Glu Gln Cys
Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr 565
570 575Asn Ser Asp Lys Leu Pro Lys Ala Ala Gly
Ala Thr Leu Lys Gly Lys 580 585
590Leu His Val Pro Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu
595 600 605Ala Pro Glu Pro Met Ile Thr
Phe Gly Phe Arg Ser Val Ser Leu Lys 610 615
620Leu His Pro Lys Asn Pro Thr Tyr Leu Ile Thr Arg Gln Leu Ala
Asp625 630 635 640Glu Pro
His Tyr Thr His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn
645 650 655Phe Thr Val Thr Glu Lys Gly
Trp Glu Phe Val Trp Gly Asn His Pro 660 665
670Pro Lys Arg Phe Trp Ala Gln Glu Thr Ala Pro Gly Asn Pro
His Gly 675 680 685Leu Pro His Glu
Val Ile Thr His Tyr Tyr His Arg Tyr Pro Met Ser 690
695 700Thr Ile Leu Gly Leu Ser Ile Cys Ala Ala Ile Ala
Thr Val Ser Val705 710 715
720Ala Ala Ser Thr Trp Leu Phe Cys Arg Ser Arg Val Ala Cys Leu Thr
725 730 735Pro Tyr Arg Leu Thr
Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val 740
745 750Leu Cys Cys Ala Arg Thr Ala Arg Ala Glu Thr Thr
Trp Glu Ser Leu 755 760 765Asp His
Leu Trp Asn Asn Asn Gln Gln Met Phe Trp Ile Gln Leu Leu 770
775 780Ile Pro Leu Ala Ala Leu Ile Val Val Thr Arg
Leu Leu Arg Cys Val785 790 795
800Cys Cys Val Val Pro Phe Leu Val Met Ala Gly Ala Ala Gly Ala Gly
805 810 815Ala Tyr Glu His
Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr 820
825 830Asn Thr Ile Val Asn Arg Ala Gly Tyr Ala Pro
Leu Pro Ile Ser Ile 835 840 845Thr
Pro Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu Glu Tyr Val 850
855 860Thr Cys His Tyr Lys Thr Gly Met Asp Ser
Pro Ala Ile Lys Cys Cys865 870 875
880Gly Ser Gln Glu Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys
Lys 885 890 895Val Phe Thr
Gly Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe 900
905 910Cys Asp Thr Glu Asn Thr Gln Val Ser Lys
Ala Tyr Val Met Lys Ser 915 920
925Asp Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala 930
935 940Ser Val Gln Ala Phe Leu Asn Ile
Thr Val Gly Glu His Ser Ile Val945 950
955 960Thr Thr Val Tyr Val Asn Gly Glu Thr Pro Val Asn
Phe Asn Gly Val 965 970
975Lys Ile Thr Ala Gly Pro Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg
980 985 990Lys Ile Val Gln Tyr Ala
Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu 995 1000
1005Tyr Gly Ala Gly Gln Pro Gly Ala Phe Gly Asp Ile
Gln Ser Arg 1010 1015 1020Thr Val Ser
Ser Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu 1025
1030 1035Gln Arg Pro Lys Ala Gly Ala Ile His Val Pro
Tyr Thr Gln Ala 1040 1045 1050Pro Ser
Gly Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu 1055
1060 1065Lys Phe Thr Ala Pro Phe Gly Cys Glu Ile
Tyr Thr Asn Pro Ile 1070 1075 1080Arg
Ala Glu Asn Cys Ala Val Gly Ser Ile Pro Leu Ala Phe Asp 1085
1090 1095Ile Pro Asp Ala Leu Phe Thr Arg Val
Ser Glu Thr Pro Thr Leu 1100 1105
1110Ser Ala Ala Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp
1115 1120 1125Phe Gly Gly Ile Ala Thr
Val Lys Tyr Ser Ala Ser Lys Ser Gly 1130 1135
1140Lys Cys Ala Val His Val Pro Ser Gly Thr Ala Thr Leu Lys
Glu 1145 1150 1155Ala Ala Val Glu Leu
Thr Glu Gln Gly Ser Ala Thr Ile His Phe 1160 1165
1170Ser Thr Ala Asn Ile His Pro Glu Phe Arg Leu Gln Ile
Cys Thr 1175 1180 1185Ser Tyr Val Thr
Cys Lys Gly Asp Cys His Pro Pro Lys Asp His 1190
1195 1200Ile Val Thr His Pro Gln Tyr His Ala Gln Thr
Phe Thr Ala Ala 1205 1210 1215Val Ser
Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly 1220
1225 1230Ser Ala Val Ile Ile Ile Ile Gly Leu Val
Leu Ala Thr Ile Val 1235 1240 1245Ala
Met Tyr Val Leu Thr Asn Gln Lys His Asn 1250
1255238416DNAArtificial SequenceSynthetic vector VLP_CHI 520 23gaattcccat
tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt 60ccaacattac
cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg 120gggtcattag
ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc 180ccgcctggct
gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc 240atagtaacgc
caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact 300gcccacttgg
cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat 360gacggtaaat
ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact 420tggcagtaca
tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac 480atcaatgggc
gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac 540gtcaatggga
gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac 600tccgccccat
tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga 660gctcgtttag
tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat 720agaagacacc
gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag 780tactcgttgc
tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc 840tttccatggg
tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg 900ccaccatgga
gttcatcccg acgcaaactt tctataacag aaggtaccaa ccccgaccct 960gggccccacg
ccctacaatt caagtaatta gacctagacc acgtccacag aggcaggctg 1020ggcaactcgc
ccagctgatc tccgcagtca acaaattgac catgcgcgcg gtacctcaac 1080agaagcctcg
cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag gcgccgcaaa 1140acgacccaaa
gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag aagaagaaac 1200caggccgtag
ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc gaagtcaagc 1260atgaaggcaa
agtgatgggc tacgcatgcc tggtggggga taaagtaatg aaaccagcac 1320atgtgaaggg
aactatcgac aatgccgatc tggctaaact ggcctttaag cggtcgtcta 1380aatacgatct
tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc tcgaagttta 1440cccacgagaa
acccgagggg tactataact ggcatcacgg agcagtgcag tattcaggag 1500gccggttcac
tatcccgacg ggtgcaggca agccgggaga cagcggcaga ccgatcttcg 1560acaacaaagg
acgggtggtg gccatcgtcc taggaggggc caacgaaggt gcccgcacgg 1620ccctctccgt
ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct gagggagccg 1680aagagtggag
cctcgccctc ccggtcttgt gcctgttggc aaacactaca ttcccctgct 1740ctcagccgcc
ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc ttgcgcatgc 1800ttgaggacaa
cgtgatgaga cccggatact accagctact aaaagcatcg ctgacttgct 1860ctccccaccg
ccaaagacgc agtactaagg acaattttaa tgtctataaa gccacaagac 1920catatctagc
tcattgtcct gactgcggag aagggcattc gtgccacagc cctatcgcat 1980tggagcgcat
cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc tctttgcaga 2040tcgggataaa
gacagatgac agccacgatt ggaccaagct gcgctatatg gatagccata 2100cgccagcgga
cgcggagcga gccggattgc ttgtaaggac ttcagcaccg tgcacgatca 2160ccgggaccat
gggacacttt attctcgccc gatgcccgaa aggagagacg ctgacagtgg 2220gatttacgga
cagcagaaag atcagccaca catgcacaca cccgttccat catgaaccac 2280ctgtgatagg
tagggagagg ttccactctc gaccacaaca tggtaaagag ttaccttgca 2340gcacgtacgt
gcagagcacc gctgccactg ctgaggagat agaggtgcat atgcccccag 2400atactcctga
ccgcacgctg atgacgcagc agtctggcaa cgtgaagatc acagttaatg 2460gctccggagg
atccggcggg cagacggtgc ggtacaagtg caactgcggt ggctcaaacg 2520agggactgac
aaccacagac aaagtgatca ataactgcaa aattgatcag tgccatgctg 2580cagtcactaa
tcacaagaat tggcaataca actccccttt agtcccgcgc aacgctgaac 2640tcggggaccg
taaaggaaag atccacatcc cattcccatt ggcaaacgtg acttgcagag 2700tgccaaaagc
aagaaaccct acagtaactt acggaaaaaa ccaagtcacc atgctgctgt 2760atcctgacca
tccgacactc ttgtcttacc gtaacatggg acaggaacca aattaccacg 2820aggagtgggt
gacacacaag aaggaggtta ccttgaccgt gcctactgag ggtctggagg 2880tcacttgggg
caacaacgaa ccatacaagt actggccgca gatgtctacg aacggtactg 2940ctcatggtca
cccacatgag ataatcttgt actattatga gctgtacccc actatgactg 3000tagtcattgt
gtcggtggcc tcgttcgtgc ttctgtcgat ggtgggcaca gcagtgggaa 3060tgtgtgtgtg
cgcacggcgc agatgcatta caccatatga attaacacca ggagccactg 3120ttcccttcct
gctcagcctg ctatgctgcg tcagaacgac caaggcggcc acatattacg 3180aggctgcggc
atatctatgg aacgaacagc agcccctgtt ctggttgcag gctcttatcc 3240cgctggccgc
cttgatcgtc ctgtgcaact gtctgaaact cttgccatgc tgctgtaaga 3300ccctggcttt
tttagccgta atgagcatcg gtgcccacac tgtgagcgcg tacgaacacg 3360taacagtgat
cccgaacacg gtgggagtac cgtataagac tcttgtcaac agaccgggtt 3420acagccccat
ggtgttggag atggagctac aatcagtcac cttggaacca acactgtcac 3480ttgactacat
cacgtgcgag tacaaaactg tcatcccctc cccgtacgtg aagtgctgtg 3540gtacagcaga
gtgcaaggac aagagcctac cagactacag ctgcaaggtc tttactggag 3600tctacccatt
tatgtggggc ggcgcctact gcttttgcga cgccgaaaat acgcaattga 3660gcgaggcaca
tgtagagaaa tctgaatctt gcaaaacaga gtttgcatcg gcctacagag 3720cccacaccgc
atcggcgtcg gcgaagctcc gcgtccttta ccaaggaaac aacattaccg 3780tagctgccta
cgctaacggt gaccatgccg tcacagtaaa ggacgccaag tttgtcgtgg 3840gcccaatgtc
ctccgcctgg acaccttttg acaacaaaat cgtggtgtac aaaggcgacg 3900tctacaacat
ggactaccca ccttttggcg caggaagacc aggacaattt ggtgacattc 3960aaagtcgtac
accggaaagt aaagacgttt atgccaacac tcagttggta ctacagaggc 4020cagcagcagg
cacggtacat gtaccatact ctcaggcacc atctggcttc aagtattggc 4080tgaaggaacg
aggagcatcg ctacagcaca cggcaccgtt cggttgccag attgcgacaa 4140acccggtaag
agctgtaaat tgcgctgtgg ggaacatacc aatttccatc gacataccgg 4200atgcggcctt
tactagggtt gtcgatgcac cctctgtaac ggacatgtca tgcgaagtac 4260cagcctgcac
tcactcctcc gactttgggg gcgtcgccat catcaaatac acagctagca 4320agaaaggtaa
atgtgcagta cattcgatga ccaacgccgt taccattcga gaagccgacg 4380tagaagtaga
ggggaactcc cagctgcaaa tatccttctc aacagccctg gcaagcgccg 4440agtttcgcgt
gcaagtgtgc tccacacaag tacactgcgc agccgcatgc caccctccaa 4500aggaccacat
agtcaattac ccagcatcac acaccaccct tggggtccag gatatatcca 4560caacggcaat
gtcttgggtg cagaagatta cgggaggagt aggattaatt gttgctgttg 4620ctgccttaat
tttaattgtg gtgctatgcg tgtcgtttag caggcactaa ggatctagat 4680ctgctgtgcc
ttctagttgc cagccatctg ttgtttgccc ctcccccgtg ccttccttga 4740ccctggaagg
tgccactccc actgtccttt cctaataaaa tgaggaaatt gcatcgcatt 4800gtctgagtag
gtgtcattct attctggggg gtggggtggg gcaggacagc aagggggagg 4860attgggaaga
caatagcagg catgctgggg atgcggtggg ctctatgggt acccaggtgc 4920tgaagaattg
acccggttcc tcctgggcca gaaagaagca ggcacatccc cttctctgtg 4980acacaccctg
tccacgcccc tggttcttag ttccagcccc actcatagga cactcatagc 5040tcaggagggc
tccgccttca atcccacccg ctaaagtact tggagcggtc tctccctccc 5100tcatcagccc
accaaaccaa acctagcctc caagagtggg aagaaattaa agcaagatag 5160gctattaagt
gcagagggag agaaaatgcc tccaacatgt gaggaagtaa tgagagaaat 5220catagaattt
taaggccatg atttaaggcc atcatggcct aagcttgaaa ggagatagga 5280tcaaagcttg
gcgtaatcat ggtcatagct gtttcctgtg tgaaattgtt atccgctcac 5340aattccacac
aacatacgag ccggaagcat aaagtgtaaa gcctggggtg cctaatgagt 5400gagctaactc
acattaattg cgttgcgctc actgcccgct ttccagtcgg gaaacctgtc 5460gtgccagctg
cattaatgaa tcggccaacg cgcggggaga ggcggtttgc gtattgggcg 5520ctcttccgct
tcctcgctca ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt 5580atcagctcac
tcaaaggcgg taatacggtt atccacagaa tcaggggata acgcaggaaa 5640gaacatgtga
gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg cgttgctggc 5700gtttttccat
aggctccgcc cccctgacga gcatcacaaa aatcgacgct caagtcagag 5760gtggcgaaac
ccgacaggac tataaagata ccaggcgttt ccccctggaa gctccctcgt 5820gcgctctcct
gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg 5880aagcgtggcg
ctttctcata gctcacgctg taggtatctc agttcggtgt aggtcgttcg 5940ctccaagctg
ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg ccttatccgg 6000taactatcgt
cttgagtcca acccggtaag acacgactta tcgccactgg cagcagccac 6060tggtaacagg
attagcagag cgaggtatgt aggcggtgct acagagttct tgaagtggtg 6120gcctaactac
ggctacacta gaagaacagt atttggtatc tgcgctctgc tgaagccagt 6180taccttcgga
aaaagagttg gtagctcttg atccggcaaa caaaccaccg ctggtagcgg 6240tggttttttt
gtttgcaagc agcagattac gcgcagaaaa aaaggatctc aagaagatcc 6300tttgatcttt
tctacggggt ctgacgctca gtggaacgaa aactcacgtt aagggatttt 6360ggtcatgaga
ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa aatgaagttt 6420taaatcaatc
taaagtatat atgagtaaac ttggtctgac agttaccaat gcttaatcag 6480tgaggcacct
atctcagcga tctgtctatt tcgttcatcc atagttgcct gactccccgt 6540cgtgtagata
actacgatac gggagggctt accatctggc cccagtgctg caatgatacc 6600gcgagaacca
cgctcaccgg ctccagattt atcagcaata aaccagccag ccggaagggc 6660cgagcgcaga
agtggtcctg caactttatc cgcctccatc cagtctatta attgttgccg 6720ggaagctaga
gtaagtagtt cgccagttaa tagtttgcgc aacgttgttg ccattgctac 6780aggcatcgtg
gtgtcacgct cgtcgtttgg tatggcttca ttcagctccg gttcccaacg 6840atcaaggcga
gttacatgat cccccatgtt gtgcaaaaaa gcggttagct ccttcggtcc 6900tccgatcgtt
gtcagaagta agttggccgc agtgttatca ctcatggtta tggcagcact 6960gcataattct
cttactgtca tgccatccgt aagatgcttt tctgtgactg gtgagtactc 7020aaccaagtca
ttctgagaat agtgtatgcg gcgaccgagt tgctcttgcc cggcgtcaat 7080acgggataat
accgcgccac atagcagaac tttaaaagtg ctcatcattg gaaaacgttc 7140ttcggggcga
aaactctcaa ggatcttacc gctgttgaga tccagttcga tgtaacccac 7200tcgtgcaccc
aactgatctt cagcatcttt tactttcacc agcgtttctg ggtgagcaaa 7260aacaggaagg
caaaatgccg caaaaaaggg aataagggcg acacggaaat gttgaatact 7320catactcttc
ctttttcaat attattgaag catttatcag ggttattgtc tcatgagcgg 7380atacatattt
gaatgtattt agaaaaataa acaaataggg gttccgcgca catttccccg 7440aaaagtgcca
cctgacgtct aagaaaccat tattatcatg acattaacct ataaaaatag 7500gcgtatcacg
aggccctttc gggtcgcgcg tttcggtgat gacggtgaaa acctctgaca 7560catgcagctc
ccgttgacgg tcacagcttg tctgtaagcg gatgccggga gcagacaagc 7620ccgtcagggc
gcgtcagcgg gtgttggcgg gtgtcggggc tggcttaact atgcggcatc 7680agagcagatt
gtactgagag tgcaccataa aattgtaaac gttaatattt tgttaaaatt 7740cgcgttaaat
ttttgttaaa tcagctcatt ttttaaccaa taggccgaaa tcggcaaaat 7800cccttataaa
tcaaaagaat agcccgagat agggttgagt gttgttccag tttggaacaa 7860gagtccacta
ttaaagaacg tggactccaa cgtcaaaggg cgaaaaaccg tctatcaggg 7920cgatggccca
ctacgtgaac catcacccaa atcaagtttt ttggggtcga ggtgccgtaa 7980agcactaaat
cggaacccta aagggagccc ccgatttaga gcttgacggg gaaagccggc 8040gaacgtggcg
agaaaggaag ggaagaaagc gaaaggagcg ggcgctaggg cgctggcaag 8100tgtagcggtc
acgctgcgcg taaccaccac acccgccgcg cttaatgcgc cgctacaggg 8160cgcgtactat
ggttgctttg acgtatgcgg tgtgaaatac cgcacagatg cgtaaggaga 8220aaataccgca
tcaggcgcca ttcgccattc aggctgcgca actgttggga agggcgatcg 8280gtgcgggcct
cttcgctatt acgccagctg gcgaaagggg gatgtgctgc aaggcgatta 8340agttgggtaa
cgccagggtt ttcccagtca cgacgttgta aaacgacggc cagtgaattc 8400catggtctca
actttc
8416243762DNAArtificial SequenceSynthetic vector insert VLP_CHI 520
24atggagttca tcccgacgca aactttctat aacagaaggt accaaccccg accctgggcc
60ccacgcccta caattcaagt aattagacct agaccacgtc cacagaggca ggctgggcaa
120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag
180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac
240ccaaagcaaa agaagcaacc accacaaaag aagccggctc aaaagaagaa gaaaccaggc
300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt caagcatgaa
360ggcaaagtga tgggctacgc atgcctggtg ggggataaag taatgaaacc agcacatgtg
420aagggaacta tcgacaatgc cgatctggct aaactggcct ttaagcggtc gtctaaatac
480gatcttgaat gtgcacagat accggtgcac atgaagtctg atgcctcgaa gtttacccac
540gagaaacccg aggggtacta taactggcat cacggagcag tgcagtattc aggaggccgg
600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg gcagaccgat cttcgacaac
660aaaggacggg tggtggccat cgtcctagga ggggccaacg aaggtgcccg cacggccctc
720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta cccctgaggg agccgaagag
780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
900gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
960caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
1140ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
1200gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
1260accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
1320acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
1380ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
1500cctgaccgca cgctgatgac gcagcagtct ggcaacgtga agatcacagt taatggctcc
1560ggaggatccg gcgggcagac ggtgcggtac aagtgcaact gcggtggctc aaacgaggga
1620ctgacaacca cagacaaagt gatcaataac tgcaaaattg atcagtgcca tgctgcagtc
1680actaatcaca agaattggca atacaactcc cctttagtcc cgcgcaacgc tgaactcggg
1740gaccgtaaag gaaagatcca catcccattc ccattggcaa acgtgacttg cagagtgcca
1800aaagcaagaa accctacagt aacttacgga aaaaaccaag tcaccatgct gctgtatcct
1860gaccatccga cactcttgtc ttaccgtaac atgggacagg aaccaaatta ccacgaggag
1920tgggtgacac acaagaagga ggttaccttg accgtgccta ctgagggtct ggaggtcact
1980tggggcaaca acgaaccata caagtactgg ccgcagatgt ctacgaacgg tactgctcat
2040ggtcacccac atgagataat cttgtactat tatgagctgt accccactat gactgtagtc
2100attgtgtcgg tggcctcgtt cgtgcttctg tcgatggtgg gcacagcagt gggaatgtgt
2160gtgtgcgcac ggcgcagatg cattacacca tatgaattaa caccaggagc cactgttccc
2220ttcctgctca gcctgctatg ctgcgtcaga acgaccaagg cggccacata ttacgaggct
2280gcggcatatc tatggaacga acagcagccc ctgttctggt tgcaggctct tatcccgctg
2340gccgccttga tcgtcctgtg caactgtctg aaactcttgc catgctgctg taagaccctg
2400gcttttttag ccgtaatgag catcggtgcc cacactgtga gcgcgtacga acacgtaaca
2460gtgatcccga acacggtggg agtaccgtat aagactcttg tcaacagacc gggttacagc
2520cccatggtgt tggagatgga gctacaatca gtcaccttgg aaccaacact gtcacttgac
2580tacatcacgt gcgagtacaa aactgtcatc ccctccccgt acgtgaagtg ctgtggtaca
2640gcagagtgca aggacaagag cctaccagac tacagctgca aggtctttac tggagtctac
2700ccatttatgt ggggcggcgc ctactgcttt tgcgacgccg aaaatacgca attgagcgag
2760gcacatgtag agaaatctga atcttgcaaa acagagtttg catcggccta cagagcccac
2820accgcatcgg cgtcggcgaa gctccgcgtc ctttaccaag gaaacaacat taccgtagct
2880gcctacgcta acggtgacca tgccgtcaca gtaaaggacg ccaagtttgt cgtgggccca
2940atgtcctccg cctggacacc ttttgacaac aaaatcgtgg tgtacaaagg cgacgtctac
3000aacatggact acccaccttt tggcgcagga agaccaggac aatttggtga cattcaaagt
3060cgtacaccgg aaagtaaaga cgtttatgcc aacactcagt tggtactaca gaggccagca
3120gcaggcacgg tacatgtacc atactctcag gcaccatctg gcttcaagta ttggctgaag
3180gaacgaggag catcgctaca gcacacggca ccgttcggtt gccagattgc gacaaacccg
3240gtaagagctg taaattgcgc tgtggggaac ataccaattt ccatcgacat accggatgcg
3300gcctttacta gggttgtcga tgcaccctct gtaacggaca tgtcatgcga agtaccagcc
3360tgcactcact cctccgactt tgggggcgtc gccatcatca aatacacagc tagcaagaaa
3420ggtaaatgtg cagtacattc gatgaccaac gccgttacca ttcgagaagc cgacgtagaa
3480gtagagggga actcccagct gcaaatatcc ttctcaacag ccctggcaag cgccgagttt
3540cgcgtgcaag tgtgctccac acaagtacac tgcgcagccg catgccaccc tccaaaggac
3600cacatagtca attacccagc atcacacacc acccttgggg tccaggatat atccacaacg
3660gcaatgtctt gggtgcagaa gattacggga ggagtaggat taattgttgc tgttgctgcc
3720ttaattttaa ttgtggtgct atgcgtgtcg tttagcaggc ac
3762251254PRTArtificial SequenceSynthetic vector VLP_CHI 520 25Met Glu
Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1 5
10 15Arg Pro Trp Ala Pro Arg Pro Thr
Ile Gln Val Ile Arg Pro Arg Pro 20 25
30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala
Val 35 40 45Asn Lys Leu Thr Met
Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln
Asn Asp65 70 75 80Pro
Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys
85 90 95Lys Lys Pro Gly Arg Arg Glu
Arg Met Cys Met Lys Ile Glu Asn Asp 100 105
110Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr
Ala Cys 115 120 125Leu Val Gly Asp
Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 130
135 140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg
Ser Ser Lys Tyr145 150 155
160Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175Lys Phe Thr His Glu
Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro
Thr Gly Ala Gly 195 200 205Lys Pro
Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly
Ala Arg Thr Ala Leu225 230 235
240Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255Gly Ala Glu Glu
Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys
Thr Pro Cys Cys Tyr 275 280 285Glu
Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala
Ser Leu Thr Cys Ser Pro305 310 315
320His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys
Ala 325 330 335Thr Arg Pro
Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350Cys His Ser Pro Ile Ala Leu Glu Arg Ile
Arg Asn Glu Ala Thr Asp 355 360
365Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380Asp Ser His Asp Trp Thr Lys Leu
Arg Tyr Met Asp Ser His Thr Pro385 390
395 400Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr
Ser Ala Pro Cys 405 410
415Thr Ile Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys
420 425 430Gly Glu Thr Leu Thr Val
Gly Phe Thr Asp Ser Arg Lys Ile Ser His 435 440
445Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile Gly
Arg Glu 450 455 460Arg Phe His Ser Arg
Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr465 470
475 480Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu
Glu Ile Glu Val His Met 485 490
495Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn
500 505 510Val Lys Ile Thr Val
Asn Gly Ser Gly Gly Ser Gly Gly Gln Thr Val 515
520 525Arg Tyr Lys Cys Asn Cys Gly Gly Ser Asn Glu Gly
Leu Thr Thr Thr 530 535 540Asp Lys Val
Ile Asn Asn Cys Lys Ile Asp Gln Cys His Ala Ala Val545
550 555 560Thr Asn His Lys Asn Trp Gln
Tyr Asn Ser Pro Leu Val Pro Arg Asn 565
570 575Ala Glu Leu Gly Asp Arg Lys Gly Lys Ile His Ile
Pro Phe Pro Leu 580 585 590Ala
Asn Val Thr Cys Arg Val Pro Lys Ala Arg Asn Pro Thr Val Thr 595
600 605Tyr Gly Lys Asn Gln Val Thr Met Leu
Leu Tyr Pro Asp His Pro Thr 610 615
620Leu Leu Ser Tyr Arg Asn Met Gly Gln Glu Pro Asn Tyr His Glu Glu625
630 635 640Trp Val Thr His
Lys Lys Glu Val Thr Leu Thr Val Pro Thr Glu Gly 645
650 655Leu Glu Val Thr Trp Gly Asn Asn Glu Pro
Tyr Lys Tyr Trp Pro Gln 660 665
670Met Ser Thr Asn Gly Thr Ala His Gly His Pro His Glu Ile Ile Leu
675 680 685Tyr Tyr Tyr Glu Leu Tyr Pro
Thr Met Thr Val Val Ile Val Ser Val 690 695
700Ala Ser Phe Val Leu Leu Ser Met Val Gly Thr Ala Val Gly Met
Cys705 710 715 720Val Cys
Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly
725 730 735Ala Thr Val Pro Phe Leu Leu
Ser Leu Leu Cys Cys Val Arg Thr Thr 740 745
750Lys Ala Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr Leu Trp Asn
Glu Gln 755 760 765Gln Pro Leu Phe
Trp Leu Gln Ala Leu Ile Pro Leu Ala Ala Leu Ile 770
775 780Val Leu Cys Asn Cys Leu Lys Leu Leu Pro Cys Cys
Cys Lys Thr Leu785 790 795
800Ala Phe Leu Ala Val Met Ser Ile Gly Ala His Thr Val Ser Ala Tyr
805 810 815Glu His Val Thr Val
Ile Pro Asn Thr Val Gly Val Pro Tyr Lys Thr 820
825 830Leu Val Asn Arg Pro Gly Tyr Ser Pro Met Val Leu
Glu Met Glu Leu 835 840 845Gln Ser
Val Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys 850
855 860Glu Tyr Lys Thr Val Ile Pro Ser Pro Tyr Val
Lys Cys Cys Gly Thr865 870 875
880Ala Glu Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser Cys Lys Val Phe
885 890 895Thr Gly Val Tyr
Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp 900
905 910Ala Glu Asn Thr Gln Leu Ser Glu Ala His Val
Glu Lys Ser Glu Ser 915 920 925Cys
Lys Thr Glu Phe Ala Ser Ala Tyr Arg Ala His Thr Ala Ser Ala 930
935 940Ser Ala Lys Leu Arg Val Leu Tyr Gln Gly
Asn Asn Ile Thr Val Ala945 950 955
960Ala Tyr Ala Asn Gly Asp His Ala Val Thr Val Lys Asp Ala Lys
Phe 965 970 975Val Val Gly
Pro Met Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile 980
985 990Val Val Tyr Lys Gly Asp Val Tyr Asn Met
Asp Tyr Pro Pro Phe Gly 995 1000
1005Ala Gly Arg Pro Gly Gln Phe Gly Asp Ile Gln Ser Arg Thr Pro
1010 1015 1020Glu Ser Lys Asp Val Tyr
Ala Asn Thr Gln Leu Val Leu Gln Arg 1025 1030
1035Pro Ala Ala Gly Thr Val His Val Pro Tyr Ser Gln Ala Pro
Ser 1040 1045 1050Gly Phe Lys Tyr Trp
Leu Lys Glu Arg Gly Ala Ser Leu Gln His 1055 1060
1065Thr Ala Pro Phe Gly Cys Gln Ile Ala Thr Asn Pro Val
Arg Ala 1070 1075 1080Val Asn Cys Ala
Val Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro 1085
1090 1095Asp Ala Ala Phe Thr Arg Val Val Asp Ala Pro
Ser Val Thr Asp 1100 1105 1110Met Ser
Cys Glu Val Pro Ala Cys Thr His Ser Ser Asp Phe Gly 1115
1120 1125Gly Val Ala Ile Ile Lys Tyr Thr Ala Ser
Lys Lys Gly Lys Cys 1130 1135 1140Ala
Val His Ser Met Thr Asn Ala Val Thr Ile Arg Glu Ala Asp 1145
1150 1155Val Glu Val Glu Gly Asn Ser Gln Leu
Gln Ile Ser Phe Ser Thr 1160 1165
1170Ala Leu Ala Ser Ala Glu Phe Arg Val Gln Val Cys Ser Thr Gln
1175 1180 1185Val His Cys Ala Ala Ala
Cys His Pro Pro Lys Asp His Ile Val 1190 1195
1200Asn Tyr Pro Ala Ser His Thr Thr Leu Gly Val Gln Asp Ile
Ser 1205 1210 1215Thr Thr Ala Met Ser
Trp Val Gln Lys Ile Thr Gly Gly Val Gly 1220 1225
1230Leu Ile Val Ala Val Ala Ala Leu Ile Leu Ile Val Val
Leu Cys 1235 1240 1245Val Ser Phe Ser
Arg His 1250268485DNAArtificial SequenceSynthetic VLP74_11 (CHI VLP
532_NPNAx6) sequence 26gaattcccat tgcatacgtt gtatccatat cataatatgt
acatttatat tggctcatgt 60ccaacattac cgccatgttg acattgatta ttgactagtt
attaatagta atcaattacg 120gggtcattag ttcatagccc atatatggag ttccgcgtta
cataacttac ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt
caataatgac gtatgttccc 240atagtaacgc caatagggac tttccattga cgtcaatggg
tggagtattt acggtaaact 300gcccacttgg cagtacatca agtgtatcat atgccaagta
cgccccctat tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc cagtacatga
ccttatggga ctttcctact 420tggcagtaca tctacgtatt agtcatcgct attaccatgg
tgatgcggtt ttggcagtac 480atcaatgggc gtggatagcg gtttgactca cggggatttc
caagtctcca ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat caacgggact
ttccaaaatg tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt
gggaggtcta tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc
cacgctgttt tgacctccat 720agaagacacc gggaccgatc cagcctccgt taacggtgga
gggcagtgta gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac ataatagctg
acagactaac agactgttcc 840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt
gtgatcagat atcgcggccg 900ccaccatgga gttcatcccg acgcaaactt tctataacag
aaggtaccaa ccccgaccct 960gggccccacg ccctacaatt caagtaatta gacctagacc
acgtccacag aggcaggctg 1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac
catgcgcgcg gtacctcaac 1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca
gaagaagcag gcgccgcaaa 1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc
ggctcaaaag aagaagaaac 1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga
ttgcatcttc gaagtcaagc 1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga
taaagtaatg aaaccagcac 1320atgtgaaggg aactatcgac aatgccgatc tggctaaact
ggcctttaag cggtcgtcta 1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa
gtctgatgcc tcgaagttta 1440cccacgagaa acccgagggg tactataact ggcatcacgg
agcagtgcag tattcaggag 1500gccggttcac tatcccgacg ggtgcaggca agccgggaga
cagcggcaga ccgatcttcg 1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc
caacgaaggt gcccgcacgg 1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa
aattacccct gagggagccg 1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc
aaacactaca ttcccctgct 1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc
ggaaagcacc ttgcgcatgc 1800ttgaggacaa cgtgatgaga cccggatact accagctact
aaaagcatcg ctgacttgct 1860ctccccaccg ccaaagacgc agtactaagg acaattttaa
tgtctataaa gccacaagac 1920catatctagc tcattgtcct gactgcggag aagggcattc
gtgccacagc cctatcgcat 1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa
aatccaggtc tctttgcaga 2040tcgggataaa gacagatgac agccacgatt ggaccaagct
gcgctatatg gatagccata 2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac
ttcagcaccg tgcacgatca 2160ccgggaccat gggacacttt attctcgccc gatgcccgaa
aggagagacg ctgacagtgg 2220gatttacgga cagcagaaag atcagccaca catgcacaca
cccgttccat catgaaccac 2280ctgtgatagg tagggagagg ttccactctc gaccacaaca
tggtaaagag ttaccttgca 2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat
agaggtgcat atgcccccag 2400atactcctga ccgcacgctg atgacgcagc agtctggcaa
cgtgaagatc acagttaatg 2460ggcagacggt gcggtacaag tgcaactgcg gtggctccgg
aggaaacccg aatgccaatc 2520ccaacgcgaa ccccaatgct aacccaaatg ccaacccaaa
cgccaacccc aacgctggtg 2580gatccaacga gggactgaca accacagaca aagtgatcaa
taactgcaaa attgatcagt 2640gccatgctgc agtcactaat cacaagaatt ggcaatacaa
ctccccttta gtcccgcgca 2700acgctgaact cggggaccgt aaaggaaaga tccacatccc
attcccattg gcaaacgtga 2760cttgcagagt gccaaaagca agaaacccta cagtaactta
cggaaaaaac caagtcacca 2820tgctgctgta tcctgaccat ccgacactct tgtcttaccg
taacatggga caggaaccaa 2880attaccacga ggagtgggtg acacacaaga aggaggttac
cttgaccgtg cctactgagg 2940gtctggaggt cacttggggc aacaacgaac catacaagta
ctggccgcag atgtctacga 3000acggtactgc tcatggtcac ccacatgaga taatcttgta
ctattatgag ctgtacccca 3060ctatgactgt agtcattgtg tcggtggcct cgttcgtgct
tctgtcgatg gtgggcacag 3120cagtgggaat gtgtgtgtgc gcacggcgca gatgcattac
accatatgaa ttaacaccag 3180gagccactgt tcccttcctg ctcagcctgc tatgctgcgt
cagaacgacc aaggcggcca 3240catattacga ggctgcggca tatctatgga acgaacagca
gcccctgttc tggttgcagg 3300ctcttatccc gctggccgcc ttgatcgtcc tgtgcaactg
tctgaaactc ttgccatgct 3360gctgtaagac cctggctttt ttagccgtaa tgagcatcgg
tgcccacact gtgagcgcgt 3420acgaacacgt aacagtgatc ccgaacacgg tgggagtacc
gtataagact cttgtcaaca 3480gaccgggtta cagccccatg gtgttggaga tggagctaca
atcagtcacc ttggaaccaa 3540cactgtcact tgactacatc acgtgcgagt acaaaactgt
catcccctcc ccgtacgtga 3600agtgctgtgg tacagcagag tgcaaggaca agagcctacc
agactacagc tgcaaggtct 3660ttactggagt ctacccattt atgtggggcg gcgcctactg
cttttgcgac gccgaaaata 3720cgcaattgag cgaggcacat gtagagaaat ctgaatcttg
caaaacagag tttgcatcgg 3780cctacagagc ccacaccgca tcggcgtcgg cgaagctccg
cgtcctttac caaggaaaca 3840acattaccgt agctgcctac gctaacggtg accatgccgt
cacagtaaag gacgccaagt 3900ttgtcgtggg cccaatgtcc tccgcctgga caccttttga
caacaaaatc gtggtgtaca 3960aaggcgacgt ctacaacatg gactacccac cttttggcgc
aggaagacca ggacaatttg 4020gtgacattca aagtcgtaca ccggaaagta aagacgttta
tgccaacact cagttggtac 4080tacagaggcc agcagcaggc acggtacatg taccatactc
tcaggcacca tctggcttca 4140agtattggct gaaggaacga ggagcatcgc tacagcacac
ggcaccgttc ggttgccaga 4200ttgcgacaaa cccggtaaga gctgtaaatt gcgctgtggg
gaacatacca atttccatcg 4260acataccgga tgcggccttt actagggttg tcgatgcacc
ctctgtaacg gacatgtcat 4320gcgaagtacc agcctgcact cactcctccg actttggggg
cgtcgccatc atcaaataca 4380cagctagcaa gaaaggtaaa tgtgcagtac attcgatgac
caacgccgtt accattcgag 4440aagccgacgt agaagtagag gggaactccc agctgcaaat
atccttctca acagccctgg 4500caagcgccga gtttcgcgtg caagtgtgct ccacacaagt
acactgcgca gccgcatgcc 4560accctccaaa ggaccacata gtcaattacc cagcatcaca
caccaccctt ggggtccagg 4620atatatccac aacggcaatg tcttgggtgc agaagattac
gggaggagta ggattaattg 4680ttgctgttgc tgccttaatt ttaattgtgg tgctatgcgt
gtcgtttagc aggcactaag 4740gatctagatc tgctgtgcct tctagttgcc agccatctgt
tgtttgcccc tcccccgtgc 4800cttccttgac cctggaaggt gccactccca ctgtcctttc
ctaataaaat gaggaaattg 4860catcgcattg tctgagtagg tgtcattcta ttctgggggg
tggggtgggg caggacagca 4920agggggagga ttgggaagac aatagcaggc atgctgggga
tgcggtgggc tctatgggta 4980cccaggtgct gaagaattga cccggttcct cctgggccag
aaagaagcag gcacatcccc 5040ttctctgtga cacaccctgt ccacgcccct ggttcttagt
tccagcccca ctcataggac 5100actcatagct caggagggct ccgccttcaa tcccacccgc
taaagtactt ggagcggtct 5160ctccctccct catcagccca ccaaaccaaa cctagcctcc
aagagtggga agaaattaaa 5220gcaagatagg ctattaagtg cagagggaga gaaaatgcct
ccaacatgtg aggaagtaat 5280gagagaaatc atagaatttt aaggccatga tttaaggcca
tcatggccta agcttgaaag 5340gagataggat caaagcttgg cgtaatcatg gtcatagctg
tttcctgtgt gaaattgtta 5400tccgctcaca attccacaca acatacgagc cggaagcata
aagtgtaaag cctggggtgc 5460ctaatgagtg agctaactca cattaattgc gttgcgctca
ctgcccgctt tccagtcggg 5520aaacctgtcg tgccagctgc attaatgaat cggccaacgc
gcggggagag gcggtttgcg 5580tattgggcgc tcttccgctt cctcgctcac tgactcgctg
cgctcggtcg ttcggctgcg 5640gcgagcggta tcagctcact caaaggcggt aatacggtta
tccacagaat caggggataa 5700cgcaggaaag aacatgtgag caaaaggcca gcaaaaggcc
aggaaccgta aaaaggccgc 5760gttgctggcg tttttccata ggctccgccc ccctgacgag
catcacaaaa atcgacgctc 5820aagtcagagg tggcgaaacc cgacaggact ataaagatac
caggcgtttc cccctggaag 5880ctccctcgtg cgctctcctg ttccgaccct gccgcttacc
ggatacctgt ccgcctttct 5940cccttcggga agcgtggcgc tttctcatag ctcacgctgt
aggtatctca gttcggtgta 6000ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc
gttcagcccg accgctgcgc 6060cttatccggt aactatcgtc ttgagtccaa cccggtaaga
cacgacttat cgccactggc 6120agcagccact ggtaacagga ttagcagagc gaggtatgta
ggcggtgcta cagagttctt 6180gaagtggtgg cctaactacg gctacactag aagaacagta
tttggtatct gcgctctgct 6240gaagccagtt accttcggaa aaagagttgg tagctcttga
tccggcaaac aaaccaccgc 6300tggtagcggt ggtttttttg tttgcaagca gcagattacg
cgcagaaaaa aaggatctca 6360agaagatcct ttgatctttt ctacggggtc tgacgctcag
tggaacgaaa actcacgtta 6420agggattttg gtcatgagat tatcaaaaag gatcttcacc
tagatccttt taaattaaaa 6480atgaagtttt aaatcaatct aaagtatata tgagtaaact
tggtctgaca gttaccaatg 6540cttaatcagt gaggcaccta tctcagcgat ctgtctattt
cgttcatcca tagttgcctg 6600actccccgtc gtgtagataa ctacgatacg ggagggctta
ccatctggcc ccagtgctgc 6660aatgataccg cgagaaccac gctcaccggc tccagattta
tcagcaataa accagccagc 6720cggaagggcc gagcgcagaa gtggtcctgc aactttatcc
gcctccatcc agtctattaa 6780ttgttgccgg gaagctagag taagtagttc gccagttaat
agtttgcgca acgttgttgc 6840cattgctaca ggcatcgtgg tgtcacgctc gtcgtttggt
atggcttcat tcagctccgg 6900ttcccaacga tcaaggcgag ttacatgatc ccccatgttg
tgcaaaaaag cggttagctc 6960cttcggtcct ccgatcgttg tcagaagtaa gttggccgca
gtgttatcac tcatggttat 7020ggcagcactg cataattctc ttactgtcat gccatccgta
agatgctttt ctgtgactgg 7080tgagtactca accaagtcat tctgagaata gtgtatgcgg
cgaccgagtt gctcttgccc 7140ggcgtcaata cgggataata ccgcgccaca tagcagaact
ttaaaagtgc tcatcattgg 7200aaaacgttct tcggggcgaa aactctcaag gatcttaccg
ctgttgagat ccagttcgat 7260gtaacccact cgtgcaccca actgatcttc agcatctttt
actttcacca gcgtttctgg 7320gtgagcaaaa acaggaaggc aaaatgccgc aaaaaaggga
ataagggcga cacggaaatg 7380ttgaatactc atactcttcc tttttcaata ttattgaagc
atttatcagg gttattgtct 7440catgagcgga tacatatttg aatgtattta gaaaaataaa
caaatagggg ttccgcgcac 7500atttccccga aaagtgccac ctgacgtcta agaaaccatt
attatcatga cattaaccta 7560taaaaatagg cgtatcacga ggccctttcg ggtcgcgcgt
ttcggtgatg acggtgaaaa 7620cctctgacac atgcagctcc cgttgacggt cacagcttgt
ctgtaagcgg atgccgggag 7680cagacaagcc cgtcagggcg cgtcagcggg tgttggcggg
tgtcggggct ggcttaacta 7740tgcggcatca gagcagattg tactgagagt gcaccataaa
attgtaaacg ttaatatttt 7800gttaaaattc gcgttaaatt tttgttaaat cagctcattt
tttaaccaat aggccgaaat 7860cggcaaaatc ccttataaat caaaagaata gcccgagata
gggttgagtg ttgttccagt 7920ttggaacaag agtccactat taaagaacgt ggactccaac
gtcaaagggc gaaaaaccgt 7980ctatcagggc gatggcccac tacgtgaacc atcacccaaa
tcaagttttt tggggtcgag 8040gtgccgtaaa gcactaaatc ggaaccctaa agggagcccc
cgatttagag cttgacgggg 8100aaagccggcg aacgtggcga gaaaggaagg gaagaaagcg
aaaggagcgg gcgctagggc 8160gctggcaagt gtagcggtca cgctgcgcgt aaccaccaca
cccgccgcgc ttaatgcgcc 8220gctacagggc gcgtactatg gttgctttga cgtatgcggt
gtgaaatacc gcacagatgc 8280gtaaggagaa aataccgcat caggcgccat tcgccattca
ggctgcgcaa ctgttgggaa 8340gggcgatcgg tgcgggcctc ttcgctatta cgccagctgg
cgaaaggggg atgtgctgca 8400aggcgattaa gttgggtaac gccagggttt tcccagtcac
gacgttgtaa aacgacggcc 8460agtgaattcc atggtctcaa ctttc
8485273831DNAArtificial SequenceSynthetic VLP74_11
(CHI VLP 532 NPNAx6) CHIKV- NPNAx6 sequence 27atggagttca tcccgacgca
aactttctat aacagaaggt accaaccccg accctgggcc 60ccacgcccta caattcaagt
aattagacct agaccacgtc cacagaggca ggctgggcaa 120ctcgcccagc tgatctccgc
agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag 180cctcgcagaa atcggaaaaa
caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac 240ccaaagcaaa agaagcaacc
accacaaaag aagccggctc aaaagaagaa gaaaccaggc 300cgtagggaga gaatgtgcat
gaaaattgaa aatgattgca tcttcgaagt caagcatgaa 360ggcaaagtga tgggctacgc
atgcctggtg ggggataaag taatgaaacc agcacatgtg 420aagggaacta tcgacaatgc
cgatctggct aaactggcct ttaagcggtc gtctaaatac 480gatcttgaat gtgcacagat
accggtgcac atgaagtctg atgcctcgaa gtttacccac 540gagaaacccg aggggtacta
taactggcat cacggagcag tgcagtattc aggaggccgg 600ttcactatcc cgacgggtgc
aggcaagccg ggagacagcg gcagaccgat cttcgacaac 660aaaggacggg tggtggccat
cgtcctagga ggggccaacg aaggtgcccg cacggccctc 720tccgtggtga cgtggaacaa
agacatcgtc acaaaaatta cccctgaggg agccgaagag 780tggagcctcg ccctcccggt
cttgtgcctg ttggcaaaca ctacattccc ctgctctcag 840ccgccttgca caccctgctg
ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag 900gacaacgtga tgagacccgg
atactaccag ctactaaaag catcgctgac ttgctctccc 960caccgccaaa gacgcagtac
taaggacaat tttaatgtct ataaagccac aagaccatat 1020ctagctcatt gtcctgactg
cggagaaggg cattcgtgcc acagccctat cgcattggag 1080cgcatcagaa atgaagcaac
ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg 1140ataaagacag atgacagcca
cgattggacc aagctgcgct atatggatag ccatacgcca 1200gcggacgcgg agcgagccgg
attgcttgta aggacttcag caccgtgcac gatcaccggg 1260accatgggac actttattct
cgcccgatgc ccgaaaggag agacgctgac agtgggattt 1320acggacagca gaaagatcag
ccacacatgc acacacccgt tccatcatga accacctgtg 1380ataggtaggg agaggttcca
ctctcgacca caacatggta aagagttacc ttgcagcacg 1440tacgtgcaga gcaccgctgc
cactgctgag gagatagagg tgcatatgcc cccagatact 1500cctgaccgca cgctgatgac
gcagcagtct ggcaacgtga agatcacagt taatgggcag 1560acggtgcggt acaagtgcaa
ctgcggtggc tccggaggaa acccgaatgc caatcccaac 1620gcgaacccca atgctaaccc
aaatgccaac ccaaacgcca accccaacgc tggtggatcc 1680aacgagggac tgacaaccac
agacaaagtg atcaataact gcaaaattga tcagtgccat 1740gctgcagtca ctaatcacaa
gaattggcaa tacaactccc ctttagtccc gcgcaacgct 1800gaactcgggg accgtaaagg
aaagatccac atcccattcc cattggcaaa cgtgacttgc 1860agagtgccaa aagcaagaaa
ccctacagta acttacggaa aaaaccaagt caccatgctg 1920ctgtatcctg accatccgac
actcttgtct taccgtaaca tgggacagga accaaattac 1980cacgaggagt gggtgacaca
caagaaggag gttaccttga ccgtgcctac tgagggtctg 2040gaggtcactt ggggcaacaa
cgaaccatac aagtactggc cgcagatgtc tacgaacggt 2100actgctcatg gtcacccaca
tgagataatc ttgtactatt atgagctgta ccccactatg 2160actgtagtca ttgtgtcggt
ggcctcgttc gtgcttctgt cgatggtggg cacagcagtg 2220ggaatgtgtg tgtgcgcacg
gcgcagatgc attacaccat atgaattaac accaggagcc 2280actgttccct tcctgctcag
cctgctatgc tgcgtcagaa cgaccaaggc ggccacatat 2340tacgaggctg cggcatatct
atggaacgaa cagcagcccc tgttctggtt gcaggctctt 2400atcccgctgg ccgccttgat
cgtcctgtgc aactgtctga aactcttgcc atgctgctgt 2460aagaccctgg cttttttagc
cgtaatgagc atcggtgccc acactgtgag cgcgtacgaa 2520cacgtaacag tgatcccgaa
cacggtggga gtaccgtata agactcttgt caacagaccg 2580ggttacagcc ccatggtgtt
ggagatggag ctacaatcag tcaccttgga accaacactg 2640tcacttgact acatcacgtg
cgagtacaaa actgtcatcc cctccccgta cgtgaagtgc 2700tgtggtacag cagagtgcaa
ggacaagagc ctaccagact acagctgcaa ggtctttact 2760ggagtctacc catttatgtg
gggcggcgcc tactgctttt gcgacgccga aaatacgcaa 2820ttgagcgagg cacatgtaga
gaaatctgaa tcttgcaaaa cagagtttgc atcggcctac 2880agagcccaca ccgcatcggc
gtcggcgaag ctccgcgtcc tttaccaagg aaacaacatt 2940accgtagctg cctacgctaa
cggtgaccat gccgtcacag taaaggacgc caagtttgtc 3000gtgggcccaa tgtcctccgc
ctggacacct tttgacaaca aaatcgtggt gtacaaaggc 3060gacgtctaca acatggacta
cccacctttt ggcgcaggaa gaccaggaca atttggtgac 3120attcaaagtc gtacaccgga
aagtaaagac gtttatgcca acactcagtt ggtactacag 3180aggccagcag caggcacggt
acatgtacca tactctcagg caccatctgg cttcaagtat 3240tggctgaagg aacgaggagc
atcgctacag cacacggcac cgttcggttg ccagattgcg 3300acaaacccgg taagagctgt
aaattgcgct gtggggaaca taccaatttc catcgacata 3360ccggatgcgg cctttactag
ggttgtcgat gcaccctctg taacggacat gtcatgcgaa 3420gtaccagcct gcactcactc
ctccgacttt gggggcgtcg ccatcatcaa atacacagct 3480agcaagaaag gtaaatgtgc
agtacattcg atgaccaacg ccgttaccat tcgagaagcc 3540gacgtagaag tagaggggaa
ctcccagctg caaatatcct tctcaacagc cctggcaagc 3600gccgagtttc gcgtgcaagt
gtgctccaca caagtacact gcgcagccgc atgccaccct 3660ccaaaggacc acatagtcaa
ttacccagca tcacacacca cccttggggt ccaggatata 3720tccacaacgg caatgtcttg
ggtgcagaag attacgggag gagtaggatt aattgttgct 3780gttgctgcct taattttaat
tgtggtgcta tgcgtgtcgt ttagcaggca c 3831281277PRTArtificial
SequenceSynthetic VLP74_11 (CHI VLP 532 NPNAx6) sequence 28Met Glu
Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1 5
10 15Arg Pro Trp Ala Pro Arg Pro Thr
Ile Gln Val Ile Arg Pro Arg Pro 20 25
30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala
Val 35 40 45Asn Lys Leu Thr Met
Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln
Asn Asp65 70 75 80Pro
Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys
85 90 95Lys Lys Pro Gly Arg Arg Glu
Arg Met Cys Met Lys Ile Glu Asn Asp 100 105
110Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr
Ala Cys 115 120 125Leu Val Gly Asp
Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 130
135 140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg
Ser Ser Lys Tyr145 150 155
160Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175Lys Phe Thr His Glu
Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro
Thr Gly Ala Gly 195 200 205Lys Pro
Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly
Ala Arg Thr Ala Leu225 230 235
240Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255Gly Ala Glu Glu
Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys
Thr Pro Cys Cys Tyr 275 280 285Glu
Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala
Ser Leu Thr Cys Ser Pro305 310 315
320His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys
Ala 325 330 335Thr Arg Pro
Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350Cys His Ser Pro Ile Ala Leu Glu Arg Ile
Arg Asn Glu Ala Thr Asp 355 360
365Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380Asp Ser His Asp Trp Thr Lys Leu
Arg Tyr Met Asp Ser His Thr Pro385 390
395 400Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr
Ser Ala Pro Cys 405 410
415Thr Ile Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys
420 425 430Gly Glu Thr Leu Thr Val
Gly Phe Thr Asp Ser Arg Lys Ile Ser His 435 440
445Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile Gly
Arg Glu 450 455 460Arg Phe His Ser Arg
Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr465 470
475 480Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu
Glu Ile Glu Val His Met 485 490
495Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn
500 505 510Val Lys Ile Thr Val
Asn Gly Gln Thr Val Arg Tyr Lys Cys Asn Cys 515
520 525Gly Gly Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 530 535 540Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser545
550 555 560Asn Glu Gly Leu Thr Thr Thr
Asp Lys Val Ile Asn Asn Cys Lys Ile 565
570 575Asp Gln Cys His Ala Ala Val Thr Asn His Lys Asn
Trp Gln Tyr Asn 580 585 590Ser
Pro Leu Val Pro Arg Asn Ala Glu Leu Gly Asp Arg Lys Gly Lys 595
600 605Ile His Ile Pro Phe Pro Leu Ala Asn
Val Thr Cys Arg Val Pro Lys 610 615
620Ala Arg Asn Pro Thr Val Thr Tyr Gly Lys Asn Gln Val Thr Met Leu625
630 635 640Leu Tyr Pro Asp
His Pro Thr Leu Leu Ser Tyr Arg Asn Met Gly Gln 645
650 655Glu Pro Asn Tyr His Glu Glu Trp Val Thr
His Lys Lys Glu Val Thr 660 665
670Leu Thr Val Pro Thr Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu
675 680 685Pro Tyr Lys Tyr Trp Pro Gln
Met Ser Thr Asn Gly Thr Ala His Gly 690 695
700His Pro His Glu Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr Pro Thr
Met705 710 715 720Thr Val
Val Ile Val Ser Val Ala Ser Phe Val Leu Leu Ser Met Val
725 730 735Gly Thr Ala Val Gly Met Cys
Val Cys Ala Arg Arg Arg Cys Ile Thr 740 745
750Pro Tyr Glu Leu Thr Pro Gly Ala Thr Val Pro Phe Leu Leu
Ser Leu 755 760 765Leu Cys Cys Val
Arg Thr Thr Lys Ala Ala Thr Tyr Tyr Glu Ala Ala 770
775 780Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp
Leu Gln Ala Leu785 790 795
800Ile Pro Leu Ala Ala Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu
805 810 815Pro Cys Cys Cys Lys
Thr Leu Ala Phe Leu Ala Val Met Ser Ile Gly 820
825 830Ala His Thr Val Ser Ala Tyr Glu His Val Thr Val
Ile Pro Asn Thr 835 840 845Val Gly
Val Pro Tyr Lys Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro 850
855 860Met Val Leu Glu Met Glu Leu Gln Ser Val Thr
Leu Glu Pro Thr Leu865 870 875
880Ser Leu Asp Tyr Ile Thr Cys Glu Tyr Lys Thr Val Ile Pro Ser Pro
885 890 895Tyr Val Lys Cys
Cys Gly Thr Ala Glu Cys Lys Asp Lys Ser Leu Pro 900
905 910Asp Tyr Ser Cys Lys Val Phe Thr Gly Val Tyr
Pro Phe Met Trp Gly 915 920 925Gly
Ala Tyr Cys Phe Cys Asp Ala Glu Asn Thr Gln Leu Ser Glu Ala 930
935 940His Val Glu Lys Ser Glu Ser Cys Lys Thr
Glu Phe Ala Ser Ala Tyr945 950 955
960Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val Leu Tyr
Gln 965 970 975Gly Asn Asn
Ile Thr Val Ala Ala Tyr Ala Asn Gly Asp His Ala Val 980
985 990Thr Val Lys Asp Ala Lys Phe Val Val Gly
Pro Met Ser Ser Ala Trp 995 1000
1005Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys Gly Asp Val Tyr
1010 1015 1020Asn Met Asp Tyr Pro Pro
Phe Gly Ala Gly Arg Pro Gly Gln Phe 1025 1030
1035Gly Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr
Ala 1040 1045 1050Asn Thr Gln Leu Val
Leu Gln Arg Pro Ala Ala Gly Thr Val His 1055 1060
1065Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp
Leu Lys 1070 1075 1080Glu Arg Gly Ala
Ser Leu Gln His Thr Ala Pro Phe Gly Cys Gln 1085
1090 1095Ile Ala Thr Asn Pro Val Arg Ala Val Asn Cys
Ala Val Gly Asn 1100 1105 1110Ile Pro
Ile Ser Ile Asp Ile Pro Asp Ala Ala Phe Thr Arg Val 1115
1120 1125Val Asp Ala Pro Ser Val Thr Asp Met Ser
Cys Glu Val Pro Ala 1130 1135 1140Cys
Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys Tyr 1145
1150 1155Thr Ala Ser Lys Lys Gly Lys Cys Ala
Val His Ser Met Thr Asn 1160 1165
1170Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn Ser
1175 1180 1185Gln Leu Gln Ile Ser Phe
Ser Thr Ala Leu Ala Ser Ala Glu Phe 1190 1195
1200Arg Val Gln Val Cys Ser Thr Gln Val His Cys Ala Ala Ala
Cys 1205 1210 1215His Pro Pro Lys Asp
His Ile Val Asn Tyr Pro Ala Ser His Thr 1220 1225
1230Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser
Trp Val 1235 1240 1245Gln Lys Ile Thr
Gly Gly Val Gly Leu Ile Val Ala Val Ala Ala 1250
1255 1260Leu Ile Leu Ile Val Val Leu Cys Val Ser Phe
Ser Arg His 1265 1270
1275298713DNAArtificial SequenceSynthetic VLP78_11 (CHI VLP 532 NPNAx25)
sequence 29gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat
tggctcatgt 60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta
atcaattacg 120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac
ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac
gtatgttccc 240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt
acggtaaact 300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat
tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga
ctttcctact 420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt
ttggcagtac 480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca
ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg
tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta
tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt
tgacctccat 720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta
gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac
agactgttcc 840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat
atcgcggccg 900ccaccatgga gttcatcccg acgcaaactt tctataacag aaggtaccaa
ccccgaccct 960gggccccacg ccctacaatt caagtaatta gacctagacc acgtccacag
aggcaggctg 1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac catgcgcgcg
gtacctcaac 1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag
gcgccgcaaa 1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag
aagaagaaac 1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc
gaagtcaagc 1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga taaagtaatg
aaaccagcac 1320atgtgaaggg aactatcgac aatgccgatc tggctaaact ggcctttaag
cggtcgtcta 1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc
tcgaagttta 1440cccacgagaa acccgagggg tactataact ggcatcacgg agcagtgcag
tattcaggag 1500gccggttcac tatcccgacg ggtgcaggca agccgggaga cagcggcaga
ccgatcttcg 1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc caacgaaggt
gcccgcacgg 1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct
gagggagccg 1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc aaacactaca
ttcccctgct 1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc
ttgcgcatgc 1800ttgaggacaa cgtgatgaga cccggatact accagctact aaaagcatcg
ctgacttgct 1860ctccccaccg ccaaagacgc agtactaagg acaattttaa tgtctataaa
gccacaagac 1920catatctagc tcattgtcct gactgcggag aagggcattc gtgccacagc
cctatcgcat 1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc
tctttgcaga 2040tcgggataaa gacagatgac agccacgatt ggaccaagct gcgctatatg
gatagccata 2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac ttcagcaccg
tgcacgatca 2160ccgggaccat gggacacttt attctcgccc gatgcccgaa aggagagacg
ctgacagtgg 2220gatttacgga cagcagaaag atcagccaca catgcacaca cccgttccat
catgaaccac 2280ctgtgatagg tagggagagg ttccactctc gaccacaaca tggtaaagag
ttaccttgca 2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat agaggtgcat
atgcccccag 2400atactcctga ccgcacgctg atgacgcagc agtctggcaa cgtgaagatc
acagttaatg 2460ggcagacggt gcggtacaag tgcaactgcg gtggctccgg aggaaacccg
aatgccaatc 2520ccaacgcgaa ccccaacgct aaccccaacg ccaatccgaa tgcaaacccg
aacgttgacc 2580caaacgccaa cccgaatgcc aatcccaacg cgaaccccaa tgctaaccca
aatgccaacc 2640caaacgccaa ccccaacgct aatccaaacg ccaaccctaa cgccaatccc
aacgcgaatc 2700ctaacgctaa tcccaacgca aatcccaatg ctaatccgaa cgcgaaccct
aatgcaaacc 2760ccaacgccaa cccgaacgct aacccgaacg ctaatcccaa cgccggtgga
tccaacgagg 2820gactgacaac cacagacaaa gtgatcaata actgcaaaat tgatcagtgc
catgctgcag 2880tcactaatca caagaattgg caatacaact cccctttagt cccgcgcaac
gctgaactcg 2940gggaccgtaa aggaaagatc cacatcccat tcccattggc aaacgtgact
tgcagagtgc 3000caaaagcaag aaaccctaca gtaacttacg gaaaaaacca agtcaccatg
ctgctgtatc 3060ctgaccatcc gacactcttg tcttaccgta acatgggaca ggaaccaaat
taccacgagg 3120agtgggtgac acacaagaag gaggttacct tgaccgtgcc tactgagggt
ctggaggtca 3180cttggggcaa caacgaacca tacaagtact ggccgcagat gtctacgaac
ggtactgctc 3240atggtcaccc acatgagata atcttgtact attatgagct gtaccccact
atgactgtag 3300tcattgtgtc ggtggcctcg ttcgtgcttc tgtcgatggt gggcacagca
gtgggaatgt 3360gtgtgtgcgc acggcgcaga tgcattacac catatgaatt aacaccagga
gccactgttc 3420ccttcctgct cagcctgcta tgctgcgtca gaacgaccaa ggcggccaca
tattacgagg 3480ctgcggcata tctatggaac gaacagcagc ccctgttctg gttgcaggct
cttatcccgc 3540tggccgcctt gatcgtcctg tgcaactgtc tgaaactctt gccatgctgc
tgtaagaccc 3600tggctttttt agccgtaatg agcatcggtg cccacactgt gagcgcgtac
gaacacgtaa 3660cagtgatccc gaacacggtg ggagtaccgt ataagactct tgtcaacaga
ccgggttaca 3720gccccatggt gttggagatg gagctacaat cagtcacctt ggaaccaaca
ctgtcacttg 3780actacatcac gtgcgagtac aaaactgtca tcccctcccc gtacgtgaag
tgctgtggta 3840cagcagagtg caaggacaag agcctaccag actacagctg caaggtcttt
actggagtct 3900acccatttat gtggggcggc gcctactgct tttgcgacgc cgaaaatacg
caattgagcg 3960aggcacatgt agagaaatct gaatcttgca aaacagagtt tgcatcggcc
tacagagccc 4020acaccgcatc ggcgtcggcg aagctccgcg tcctttacca aggaaacaac
attaccgtag 4080ctgcctacgc taacggtgac catgccgtca cagtaaagga cgccaagttt
gtcgtgggcc 4140caatgtcctc cgcctggaca ccttttgaca acaaaatcgt ggtgtacaaa
ggcgacgtct 4200acaacatgga ctacccacct tttggcgcag gaagaccagg acaatttggt
gacattcaaa 4260gtcgtacacc ggaaagtaaa gacgtttatg ccaacactca gttggtacta
cagaggccag 4320cagcaggcac ggtacatgta ccatactctc aggcaccatc tggcttcaag
tattggctga 4380aggaacgagg agcatcgcta cagcacacgg caccgttcgg ttgccagatt
gcgacaaacc 4440cggtaagagc tgtaaattgc gctgtgggga acataccaat ttccatcgac
ataccggatg 4500cggcctttac tagggttgtc gatgcaccct ctgtaacgga catgtcatgc
gaagtaccag 4560cctgcactca ctcctccgac tttgggggcg tcgccatcat caaatacaca
gctagcaaga 4620aaggtaaatg tgcagtacat tcgatgacca acgccgttac cattcgagaa
gccgacgtag 4680aagtagaggg gaactcccag ctgcaaatat ccttctcaac agccctggca
agcgccgagt 4740ttcgcgtgca agtgtgctcc acacaagtac actgcgcagc cgcatgccac
cctccaaagg 4800accacatagt caattaccca gcatcacaca ccacccttgg ggtccaggat
atatccacaa 4860cggcaatgtc ttgggtgcag aagattacgg gaggagtagg attaattgtt
gctgttgctg 4920ccttaatttt aattgtggtg ctatgcgtgt cgtttagcag gcactaagga
tctagatctg 4980ctgtgccttc tagttgccag ccatctgttg tttgcccctc ccccgtgcct
tccttgaccc 5040tggaaggtgc cactcccact gtcctttcct aataaaatga ggaaattgca
tcgcattgtc 5100tgagtaggtg tcattctatt ctggggggtg gggtggggca ggacagcaag
ggggaggatt 5160gggaagacaa tagcaggcat gctggggatg cggtgggctc tatgggtacc
caggtgctga 5220agaattgacc cggttcctcc tgggccagaa agaagcaggc acatcccctt
ctctgtgaca 5280caccctgtcc acgcccctgg ttcttagttc cagccccact cataggacac
tcatagctca 5340ggagggctcc gccttcaatc ccacccgcta aagtacttgg agcggtctct
ccctccctca 5400tcagcccacc aaaccaaacc tagcctccaa gagtgggaag aaattaaagc
aagataggct 5460attaagtgca gagggagaga aaatgcctcc aacatgtgag gaagtaatga
gagaaatcat 5520agaattttaa ggccatgatt taaggccatc atggcctaag cttgaaagga
gataggatca 5580aagcttggcg taatcatggt catagctgtt tcctgtgtga aattgttatc
cgctcacaat 5640tccacacaac atacgagccg gaagcataaa gtgtaaagcc tggggtgcct
aatgagtgag 5700ctaactcaca ttaattgcgt tgcgctcact gcccgctttc cagtcgggaa
acctgtcgtg 5760ccagctgcat taatgaatcg gccaacgcgc ggggagaggc ggtttgcgta
ttgggcgctc 5820ttccgcttcc tcgctcactg actcgctgcg ctcggtcgtt cggctgcggc
gagcggtatc 5880agctcactca aaggcggtaa tacggttatc cacagaatca ggggataacg
caggaaagaa 5940catgtgagca aaaggccagc aaaaggccag gaaccgtaaa aaggccgcgt
tgctggcgtt 6000tttccatagg ctccgccccc ctgacgagca tcacaaaaat cgacgctcaa
gtcagaggtg 6060gcgaaacccg acaggactat aaagatacca ggcgtttccc cctggaagct
ccctcgtgcg 6120ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc gcctttctcc
cttcgggaag 6180cgtggcgctt tctcatagct cacgctgtag gtatctcagt tcggtgtagg
tcgttcgctc 6240caagctgggc tgtgtgcacg aaccccccgt tcagcccgac cgctgcgcct
tatccggtaa 6300ctatcgtctt gagtccaacc cggtaagaca cgacttatcg ccactggcag
cagccactgg 6360taacaggatt agcagagcga ggtatgtagg cggtgctaca gagttcttga
agtggtggcc 6420taactacggc tacactagaa gaacagtatt tggtatctgc gctctgctga
agccagttac 6480cttcggaaaa agagttggta gctcttgatc cggcaaacaa accaccgctg
gtagcggtgg 6540tttttttgtt tgcaagcagc agattacgcg cagaaaaaaa ggatctcaag
aagatccttt 6600gatcttttct acggggtctg acgctcagtg gaacgaaaac tcacgttaag
ggattttggt 6660catgagatta tcaaaaagga tcttcaccta gatcctttta aattaaaaat
gaagttttaa 6720atcaatctaa agtatatatg agtaaacttg gtctgacagt taccaatgct
taatcagtga 6780ggcacctatc tcagcgatct gtctatttcg ttcatccata gttgcctgac
tccccgtcgt 6840gtagataact acgatacggg agggcttacc atctggcccc agtgctgcaa
tgataccgcg 6900agaaccacgc tcaccggctc cagatttatc agcaataaac cagccagccg
gaagggccga 6960gcgcagaagt ggtcctgcaa ctttatccgc ctccatccag tctattaatt
gttgccggga 7020agctagagta agtagttcgc cagttaatag tttgcgcaac gttgttgcca
ttgctacagg 7080catcgtggtg tcacgctcgt cgtttggtat ggcttcattc agctccggtt
cccaacgatc 7140aaggcgagtt acatgatccc ccatgttgtg caaaaaagcg gttagctcct
tcggtcctcc 7200gatcgttgtc agaagtaagt tggccgcagt gttatcactc atggttatgg
cagcactgca 7260taattctctt actgtcatgc catccgtaag atgcttttct gtgactggtg
agtactcaac 7320caagtcattc tgagaatagt gtatgcggcg accgagttgc tcttgcccgg
cgtcaatacg 7380ggataatacc gcgccacata gcagaacttt aaaagtgctc atcattggaa
aacgttcttc 7440ggggcgaaaa ctctcaagga tcttaccgct gttgagatcc agttcgatgt
aacccactcg 7500tgcacccaac tgatcttcag catcttttac tttcaccagc gtttctgggt
gagcaaaaac 7560aggaaggcaa aatgccgcaa aaaagggaat aagggcgaca cggaaatgtt
gaatactcat 7620actcttcctt tttcaatatt attgaagcat ttatcagggt tattgtctca
tgagcggata 7680catatttgaa tgtatttaga aaaataaaca aataggggtt ccgcgcacat
ttccccgaaa 7740agtgccacct gacgtctaag aaaccattat tatcatgaca ttaacctata
aaaataggcg 7800tatcacgagg ccctttcggg tcgcgcgttt cggtgatgac ggtgaaaacc
tctgacacat 7860gcagctcccg ttgacggtca cagcttgtct gtaagcggat gccgggagca
gacaagcccg 7920tcagggcgcg tcagcgggtg ttggcgggtg tcggggctgg cttaactatg
cggcatcaga 7980gcagattgta ctgagagtgc accataaaat tgtaaacgtt aatattttgt
taaaattcgc 8040gttaaatttt tgttaaatca gctcattttt taaccaatag gccgaaatcg
gcaaaatccc 8100ttataaatca aaagaatagc ccgagatagg gttgagtgtt gttccagttt
ggaacaagag 8160tccactatta aagaacgtgg actccaacgt caaagggcga aaaaccgtct
atcagggcga 8220tggcccacta cgtgaaccat cacccaaatc aagttttttg gggtcgaggt
gccgtaaagc 8280actaaatcgg aaccctaaag ggagcccccg atttagagct tgacggggaa
agccggcgaa 8340cgtggcgaga aaggaaggga agaaagcgaa aggagcgggc gctagggcgc
tggcaagtgt 8400agcggtcacg ctgcgcgtaa ccaccacacc cgccgcgctt aatgcgccgc
tacagggcgc 8460gtactatggt tgctttgacg tatgcggtgt gaaataccgc acagatgcgt
aaggagaaaa 8520taccgcatca ggcgccattc gccattcagg ctgcgcaact gttgggaagg
gcgatcggtg 8580cgggcctctt cgctattacg ccagctggcg aaagggggat gtgctgcaag
gcgattaagt 8640tgggtaacgc cagggttttc ccagtcacga cgttgtaaaa cgacggccag
tgaattccat 8700ggtctcaact ttc
8713304059DNAArtificial SequenceSynthetic VLP78_11 (CHI VLP
532 NPNAx25) CHIKV- NPNAx25 sequence 30atggagttca tcccgacgca
aactttctat aacagaaggt accaaccccg accctgggcc 60ccacgcccta caattcaagt
aattagacct agaccacgtc cacagaggca ggctgggcaa 120ctcgcccagc tgatctccgc
agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag 180cctcgcagaa atcggaaaaa
caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac 240ccaaagcaaa agaagcaacc
accacaaaag aagccggctc aaaagaagaa gaaaccaggc 300cgtagggaga gaatgtgcat
gaaaattgaa aatgattgca tcttcgaagt caagcatgaa 360ggcaaagtga tgggctacgc
atgcctggtg ggggataaag taatgaaacc agcacatgtg 420aagggaacta tcgacaatgc
cgatctggct aaactggcct ttaagcggtc gtctaaatac 480gatcttgaat gtgcacagat
accggtgcac atgaagtctg atgcctcgaa gtttacccac 540gagaaacccg aggggtacta
taactggcat cacggagcag tgcagtattc aggaggccgg 600ttcactatcc cgacgggtgc
aggcaagccg ggagacagcg gcagaccgat cttcgacaac 660aaaggacggg tggtggccat
cgtcctagga ggggccaacg aaggtgcccg cacggccctc 720tccgtggtga cgtggaacaa
agacatcgtc acaaaaatta cccctgaggg agccgaagag 780tggagcctcg ccctcccggt
cttgtgcctg ttggcaaaca ctacattccc ctgctctcag 840ccgccttgca caccctgctg
ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag 900gacaacgtga tgagacccgg
atactaccag ctactaaaag catcgctgac ttgctctccc 960caccgccaaa gacgcagtac
taaggacaat tttaatgtct ataaagccac aagaccatat 1020ctagctcatt gtcctgactg
cggagaaggg cattcgtgcc acagccctat cgcattggag 1080cgcatcagaa atgaagcaac
ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg 1140ataaagacag atgacagcca
cgattggacc aagctgcgct atatggatag ccatacgcca 1200gcggacgcgg agcgagccgg
attgcttgta aggacttcag caccgtgcac gatcaccggg 1260accatgggac actttattct
cgcccgatgc ccgaaaggag agacgctgac agtgggattt 1320acggacagca gaaagatcag
ccacacatgc acacacccgt tccatcatga accacctgtg 1380ataggtaggg agaggttcca
ctctcgacca caacatggta aagagttacc ttgcagcacg 1440tacgtgcaga gcaccgctgc
cactgctgag gagatagagg tgcatatgcc cccagatact 1500cctgaccgca cgctgatgac
gcagcagtct ggcaacgtga agatcacagt taatgggcag 1560acggtgcggt acaagtgcaa
ctgcggtggc tccggaggaa acccgaatgc caatcccaac 1620gcgaacccca acgctaaccc
caacgccaat ccgaatgcaa acccgaacgt tgacccaaac 1680gccaacccga atgccaatcc
caacgcgaac cccaatgcta acccaaatgc caacccaaac 1740gccaacccca acgctaatcc
aaacgccaac cctaacgcca atcccaacgc gaatcctaac 1800gctaatccca acgcaaatcc
caatgctaat ccgaacgcga accctaatgc aaaccccaac 1860gccaacccga acgctaaccc
gaacgctaat cccaacgccg gtggatccaa cgagggactg 1920acaaccacag acaaagtgat
caataactgc aaaattgatc agtgccatgc tgcagtcact 1980aatcacaaga attggcaata
caactcccct ttagtcccgc gcaacgctga actcggggac 2040cgtaaaggaa agatccacat
cccattccca ttggcaaacg tgacttgcag agtgccaaaa 2100gcaagaaacc ctacagtaac
ttacggaaaa aaccaagtca ccatgctgct gtatcctgac 2160catccgacac tcttgtctta
ccgtaacatg ggacaggaac caaattacca cgaggagtgg 2220gtgacacaca agaaggaggt
taccttgacc gtgcctactg agggtctgga ggtcacttgg 2280ggcaacaacg aaccatacaa
gtactggccg cagatgtcta cgaacggtac tgctcatggt 2340cacccacatg agataatctt
gtactattat gagctgtacc ccactatgac tgtagtcatt 2400gtgtcggtgg cctcgttcgt
gcttctgtcg atggtgggca cagcagtggg aatgtgtgtg 2460tgcgcacggc gcagatgcat
tacaccatat gaattaacac caggagccac tgttcccttc 2520ctgctcagcc tgctatgctg
cgtcagaacg accaaggcgg ccacatatta cgaggctgcg 2580gcatatctat ggaacgaaca
gcagcccctg ttctggttgc aggctcttat cccgctggcc 2640gccttgatcg tcctgtgcaa
ctgtctgaaa ctcttgccat gctgctgtaa gaccctggct 2700tttttagccg taatgagcat
cggtgcccac actgtgagcg cgtacgaaca cgtaacagtg 2760atcccgaaca cggtgggagt
accgtataag actcttgtca acagaccggg ttacagcccc 2820atggtgttgg agatggagct
acaatcagtc accttggaac caacactgtc acttgactac 2880atcacgtgcg agtacaaaac
tgtcatcccc tccccgtacg tgaagtgctg tggtacagca 2940gagtgcaagg acaagagcct
accagactac agctgcaagg tctttactgg agtctaccca 3000tttatgtggg gcggcgccta
ctgcttttgc gacgccgaaa atacgcaatt gagcgaggca 3060catgtagaga aatctgaatc
ttgcaaaaca gagtttgcat cggcctacag agcccacacc 3120gcatcggcgt cggcgaagct
ccgcgtcctt taccaaggaa acaacattac cgtagctgcc 3180tacgctaacg gtgaccatgc
cgtcacagta aaggacgcca agtttgtcgt gggcccaatg 3240tcctccgcct ggacaccttt
tgacaacaaa atcgtggtgt acaaaggcga cgtctacaac 3300atggactacc caccttttgg
cgcaggaaga ccaggacaat ttggtgacat tcaaagtcgt 3360acaccggaaa gtaaagacgt
ttatgccaac actcagttgg tactacagag gccagcagca 3420ggcacggtac atgtaccata
ctctcaggca ccatctggct tcaagtattg gctgaaggaa 3480cgaggagcat cgctacagca
cacggcaccg ttcggttgcc agattgcgac aaacccggta 3540agagctgtaa attgcgctgt
ggggaacata ccaatttcca tcgacatacc ggatgcggcc 3600tttactaggg ttgtcgatgc
accctctgta acggacatgt catgcgaagt accagcctgc 3660actcactcct ccgactttgg
gggcgtcgcc atcatcaaat acacagctag caagaaaggt 3720aaatgtgcag tacattcgat
gaccaacgcc gttaccattc gagaagccga cgtagaagta 3780gaggggaact cccagctgca
aatatccttc tcaacagccc tggcaagcgc cgagtttcgc 3840gtgcaagtgt gctccacaca
agtacactgc gcagccgcat gccaccctcc aaaggaccac 3900atagtcaatt acccagcatc
acacaccacc cttggggtcc aggatatatc cacaacggca 3960atgtcttggg tgcagaagat
tacgggagga gtaggattaa ttgttgctgt tgctgcctta 4020attttaattg tggtgctatg
cgtgtcgttt agcaggcac 4059311353PRTArtificial
SequenceSynthetic VLP78_11 (CHI VLP 532 NPNAx25) sequence 31Met Glu
Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1 5
10 15Arg Pro Trp Ala Pro Arg Pro Thr
Ile Gln Val Ile Arg Pro Arg Pro 20 25
30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala
Val 35 40 45Asn Lys Leu Thr Met
Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln
Asn Asp65 70 75 80Pro
Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys
85 90 95Lys Lys Pro Gly Arg Arg Glu
Arg Met Cys Met Lys Ile Glu Asn Asp 100 105
110Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr
Ala Cys 115 120 125Leu Val Gly Asp
Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 130
135 140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg
Ser Ser Lys Tyr145 150 155
160Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175Lys Phe Thr His Glu
Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro
Thr Gly Ala Gly 195 200 205Lys Pro
Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly
Ala Arg Thr Ala Leu225 230 235
240Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255Gly Ala Glu Glu
Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys
Thr Pro Cys Cys Tyr 275 280 285Glu
Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala
Ser Leu Thr Cys Ser Pro305 310 315
320His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys
Ala 325 330 335Thr Arg Pro
Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350Cys His Ser Pro Ile Ala Leu Glu Arg Ile
Arg Asn Glu Ala Thr Asp 355 360
365Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380Asp Ser His Asp Trp Thr Lys Leu
Arg Tyr Met Asp Ser His Thr Pro385 390
395 400Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr
Ser Ala Pro Cys 405 410
415Thr Ile Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys
420 425 430Gly Glu Thr Leu Thr Val
Gly Phe Thr Asp Ser Arg Lys Ile Ser His 435 440
445Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile Gly
Arg Glu 450 455 460Arg Phe His Ser Arg
Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr465 470
475 480Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu
Glu Ile Glu Val His Met 485 490
495Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn
500 505 510Val Lys Ile Thr Val
Asn Gly Gln Thr Val Arg Tyr Lys Cys Asn Cys 515
520 525Gly Gly Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 530 535 540Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Val Asp Pro Asn545
550 555 560Ala Asn Pro Asn Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn 565
570 575Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 580 585 590Ala
Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 595
600 605Ala Asn Pro Asn Ala Asn Pro Asn Ala
Asn Pro Asn Ala Asn Pro Asn 610 615
620Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser Asn Glu Gly Leu625
630 635 640Thr Thr Thr Asp
Lys Val Ile Asn Asn Cys Lys Ile Asp Gln Cys His 645
650 655Ala Ala Val Thr Asn His Lys Asn Trp Gln
Tyr Asn Ser Pro Leu Val 660 665
670Pro Arg Asn Ala Glu Leu Gly Asp Arg Lys Gly Lys Ile His Ile Pro
675 680 685Phe Pro Leu Ala Asn Val Thr
Cys Arg Val Pro Lys Ala Arg Asn Pro 690 695
700Thr Val Thr Tyr Gly Lys Asn Gln Val Thr Met Leu Leu Tyr Pro
Asp705 710 715 720His Pro
Thr Leu Leu Ser Tyr Arg Asn Met Gly Gln Glu Pro Asn Tyr
725 730 735His Glu Glu Trp Val Thr His
Lys Lys Glu Val Thr Leu Thr Val Pro 740 745
750Thr Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu Pro Tyr
Lys Tyr 755 760 765Trp Pro Gln Met
Ser Thr Asn Gly Thr Ala His Gly His Pro His Glu 770
775 780Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr Pro Thr Met
Thr Val Val Ile785 790 795
800Val Ser Val Ala Ser Phe Val Leu Leu Ser Met Val Gly Thr Ala Val
805 810 815Gly Met Cys Val Cys
Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu 820
825 830Thr Pro Gly Ala Thr Val Pro Phe Leu Leu Ser Leu
Leu Cys Cys Val 835 840 845Arg Thr
Thr Lys Ala Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr Leu Trp 850
855 860Asn Glu Gln Gln Pro Leu Phe Trp Leu Gln Ala
Leu Ile Pro Leu Ala865 870 875
880Ala Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu Pro Cys Cys Cys
885 890 895Lys Thr Leu Ala
Phe Leu Ala Val Met Ser Ile Gly Ala His Thr Val 900
905 910Ser Ala Tyr Glu His Val Thr Val Ile Pro Asn
Thr Val Gly Val Pro 915 920 925Tyr
Lys Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro Met Val Leu Glu 930
935 940Met Glu Leu Gln Ser Val Thr Leu Glu Pro
Thr Leu Ser Leu Asp Tyr945 950 955
960Ile Thr Cys Glu Tyr Lys Thr Val Ile Pro Ser Pro Tyr Val Lys
Cys 965 970 975Cys Gly Thr
Ala Glu Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser Cys 980
985 990Lys Val Phe Thr Gly Val Tyr Pro Phe Met
Trp Gly Gly Ala Tyr Cys 995 1000
1005Phe Cys Asp Ala Glu Asn Thr Gln Leu Ser Glu Ala His Val Glu
1010 1015 1020Lys Ser Glu Ser Cys Lys
Thr Glu Phe Ala Ser Ala Tyr Arg Ala 1025 1030
1035His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val Leu Tyr Gln
Gly 1040 1045 1050Asn Asn Ile Thr Val
Ala Ala Tyr Ala Asn Gly Asp His Ala Val 1055 1060
1065Thr Val Lys Asp Ala Lys Phe Val Val Gly Pro Met Ser
Ser Ala 1070 1075 1080Trp Thr Pro Phe
Asp Asn Lys Ile Val Val Tyr Lys Gly Asp Val 1085
1090 1095Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly
Arg Pro Gly Gln 1100 1105 1110Phe Gly
Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr 1115
1120 1125Ala Asn Thr Gln Leu Val Leu Gln Arg Pro
Ala Ala Gly Thr Val 1130 1135 1140His
Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp Leu 1145
1150 1155Lys Glu Arg Gly Ala Ser Leu Gln His
Thr Ala Pro Phe Gly Cys 1160 1165
1170Gln Ile Ala Thr Asn Pro Val Arg Ala Val Asn Cys Ala Val Gly
1175 1180 1185Asn Ile Pro Ile Ser Ile
Asp Ile Pro Asp Ala Ala Phe Thr Arg 1190 1195
1200Val Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu Val
Pro 1205 1210 1215Ala Cys Thr His Ser
Ser Asp Phe Gly Gly Val Ala Ile Ile Lys 1220 1225
1230Tyr Thr Ala Ser Lys Lys Gly Lys Cys Ala Val His Ser
Met Thr 1235 1240 1245Asn Ala Val Thr
Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn 1250
1255 1260Ser Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu
Ala Ser Ala Glu 1265 1270 1275Phe Arg
Val Gln Val Cys Ser Thr Gln Val His Cys Ala Ala Ala 1280
1285 1290Cys His Pro Pro Lys Asp His Ile Val Asn
Tyr Pro Ala Ser His 1295 1300 1305Thr
Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser Trp 1310
1315 1320Val Gln Lys Ile Thr Gly Gly Val Gly
Leu Ile Val Ala Val Ala 1325 1330
1335Ala Leu Ile Leu Ile Val Val Leu Cys Val Ser Phe Ser Arg His
1340 1345 1350328737DNAArtificial
SequenceSynthetic VLP78_21 (VEEV VLP 519 NPNAx25) sequence
32gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggcagtt
2460ccggaggaaa cccgaatgcc aatcccaacg cgaaccccaa cgctaacccc aacgccaatc
2520cgaatgcaaa cccgaacgtt gacccaaacg ccaacccgaa tgccaatccc aacgcgaacc
2580ccaatgctaa cccaaatgcc aacccaaacg ccaaccccaa cgctaatcca aacgccaacc
2640ctaacgccaa tcccaacgcg aatcctaacg ctaatcccaa cgcaaatccc aatgctaatc
2700cgaacgcgaa ccctaatgca aaccccaacg ccaacccgaa cgctaacccg aacgctaatc
2760ccaacgccgg tggatcctca gtcaccgtga cacctcctga tgggactagc gccctggtgg
2820aatgcgagtg tggcggcaca aagatctccg agaccatcaa caagacaaaa cagttcagcc
2880agtgcacaaa gaaggagcag tgcagagcat atcggctgca gaacgataag tgggtgtata
2940attctgacaa actgcccaaa gcagcgggag ccaccttaaa aggaaaactg catgtcccat
3000tcttgctggc agacggcaaa tgcaccgtgc ctctagcacc agaacctatg ataaccttcg
3060gtttcagatc agtgtcactg aaactgcacc ctaagaatcc cacatatcta atcacccgcc
3120aacttgctga tgagcctcac tacacgcacg agctcatatc tgaaccagct gttaggaatt
3180ttaccgtcac cgaaaaaggg tgggagtttg tatggggaaa ccacccgccg aaaaggtttt
3240gggcacagga aacagcaccc ggaaatccac atgggctacc gcacgaggtg ataactcatt
3300attaccacag ataccctatg tccaccatcc tgggtttgtc aatttgtgcc gccattgcaa
3360ccgtttccgt tgcagcgtct acctggctgt tttgcagatc aagagttgcg tgcctaactc
3420cttaccggct aacacctaac gctaggatac cattttgtct ggctgtgctt tgctgcgccc
3480gcactgcccg ggccgagacc acctgggagt ccttggatca cctatggaac aataaccaac
3540agatgttctg gattcaattg ctgatccctc tggccgcctt gatcgtagtg actcgcctgc
3600tcaggtgcgt gtgctgtgtc gtgccttttt tagtcatggc cggcgccgca ggcgccggcg
3660cctacgagca cgcgaccacg atgccgagcc aagcgggaat ctcgtataac actatagtca
3720acagagcagg ctacgcacca ctccctatca gcataacacc aacaaagatc aagctgatac
3780ctacagtgaa cttggagtac gtcacctgcc actacaaaac aggaatggat tcaccagcca
3840tcaaatgctg cggatctcag gaatgcactc caacttacag gcctgatgaa cagtgcaaag
3900tcttcacagg ggtttacccg ttcatgtggg gtggtgcata ttgcttttgc gacactgaga
3960acacccaagt cagcaaggcc tacgtaatga aatctgacga ctgccttgcg gatcatgctg
4020aagcatataa agcgcacaca gcctcagtgc aggcgttcct caacatcaca gtgggagaac
4080actctattgt gactaccgtg tatgtgaatg gagaaactcc tgtgaatttc aatggggtca
4140aaataactgc aggtccgctt tccacagctt ggacaccctt tgatcgcaaa atcgtgcagt
4200atgccgggga gatctataat tatgattttc ctgagtatgg ggcaggacaa ccaggagcat
4260ttggagatat acaatccaga acagtctcaa gctctgatct gtatgccaat accaacctag
4320tgctgcagag acccaaagca ggagcgatcc acgtgccata cactcaggca ccttcgggtt
4380ttgagcaatg gaagaaagat aaagctccat cattgaaatt taccgcccct ttcggatgcg
4440aaatatatac aaaccccatt cgcgccgaaa actgtgctgt agggtcaatt ccattagcct
4500ttgacattcc cgacgccttg ttcaccaggg tgtcagaaac accgacactt tcagcggccg
4560aatgcactct taacgagtgc gtgtattctt ccgactttgg tgggatcgcc acggtcaagt
4620actcggccag caagtcaggc aagtgcgcag tccatgtgcc atcagggact gctaccctaa
4680aagaagcagc agtcgagcta accgagcaag ggtcggcgac tatccatttc tcgaccgcaa
4740atatccaccc ggagttcagg ctccaaatat gcacatcata tgttacgtgc aaaggtgatt
4800gtcacccccc gaaagaccat attgtgacac accctcagta tcacgcccaa acatttacag
4860ccgcggtgtc aaaaaccgcg tggacgtggt taacatccct gctgggagga tcagccgtaa
4920ttattataat tggcttggtg ctggctacta ttgtggccat gtacgtgctg accaaccaga
4980aacataatta aggatctaga tctgctgtgc cttctagttg ccagccatct gttgtttgcc
5040cctcccccgt gccttccttg accctggaag gtgccactcc cactgtcctt tcctaataaa
5100atgaggaaat tgcatcgcat tgtctgagta ggtgtcattc tattctgggg ggtggggtgg
5160ggcaggacag caagggggag gattgggaag acaatagcag gcatgctggg gatgcggtgg
5220gctctatggg tacccaggtg ctgaagaatt gacccggttc ctcctgggcc agaaagaagc
5280aggcacatcc ccttctctgt gacacaccct gtccacgccc ctggttctta gttccagccc
5340cactcatagg acactcatag ctcaggaggg ctccgccttc aatcccaccc gctaaagtac
5400ttggagcggt ctctccctcc ctcatcagcc caccaaacca aacctagcct ccaagagtgg
5460gaagaaatta aagcaagata ggctattaag tgcagaggga gagaaaatgc ctccaacatg
5520tgaggaagta atgagagaaa tcatagaatt ttaaggccat gatttaaggc catcatggcc
5580taagcttgaa aggagatagg atcaaagctt ggcgtaatca tggtcatagc tgtttcctgt
5640gtgaaattgt tatccgctca caattccaca caacatacga gccggaagca taaagtgtaa
5700agcctggggt gcctaatgag tgagctaact cacattaatt gcgttgcgct cactgcccgc
5760tttccagtcg ggaaacctgt cgtgccagct gcattaatga atcggccaac gcgcggggag
5820aggcggtttg cgtattgggc gctcttccgc ttcctcgctc actgactcgc tgcgctcggt
5880cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg gtaatacggt tatccacaga
5940atcaggggat aacgcaggaa agaacatgtg agcaaaaggc cagcaaaagg ccaggaaccg
6000taaaaaggcc gcgttgctgg cgtttttcca taggctccgc ccccctgacg agcatcacaa
6060aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga ctataaagat accaggcgtt
6120tccccctgga agctccctcg tgcgctctcc tgttccgacc ctgccgctta ccggatacct
6180gtccgccttt ctcccttcgg gaagcgtggc gctttctcat agctcacgct gtaggtatct
6240cagttcggtg taggtcgttc gctccaagct gggctgtgtg cacgaacccc ccgttcagcc
6300cgaccgctgc gccttatccg gtaactatcg tcttgagtcc aacccggtaa gacacgactt
6360atcgccactg gcagcagcca ctggtaacag gattagcaga gcgaggtatg taggcggtgc
6420tacagagttc ttgaagtggt ggcctaacta cggctacact agaagaacag tatttggtat
6480ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt ggtagctctt gatccggcaa
6540acaaaccacc gctggtagcg gtggtttttt tgtttgcaag cagcagatta cgcgcagaaa
6600aaaaggatct caagaagatc ctttgatctt ttctacgggg tctgacgctc agtggaacga
6660aaactcacgt taagggattt tggtcatgag attatcaaaa aggatcttca cctagatcct
6720tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata tatgagtaaa cttggtctga
6780cagttaccaa tgcttaatca gtgaggcacc tatctcagcg atctgtctat ttcgttcatc
6840catagttgcc tgactccccg tcgtgtagat aactacgata cgggagggct taccatctgg
6900ccccagtgct gcaatgatac cgcgagaacc acgctcaccg gctccagatt tatcagcaat
6960aaaccagcca gccggaaggg ccgagcgcag aagtggtcct gcaactttat ccgcctccat
7020ccagtctatt aattgttgcc gggaagctag agtaagtagt tcgccagtta atagtttgcg
7080caacgttgtt gccattgcta caggcatcgt ggtgtcacgc tcgtcgtttg gtatggcttc
7140attcagctcc ggttcccaac gatcaaggcg agttacatga tcccccatgt tgtgcaaaaa
7200agcggttagc tccttcggtc ctccgatcgt tgtcagaagt aagttggccg cagtgttatc
7260actcatggtt atggcagcac tgcataattc tcttactgtc atgccatccg taagatgctt
7320ttctgtgact ggtgagtact caaccaagtc attctgagaa tagtgtatgc ggcgaccgag
7380ttgctcttgc ccggcgtcaa tacgggataa taccgcgcca catagcagaa ctttaaaagt
7440gctcatcatt ggaaaacgtt cttcggggcg aaaactctca aggatcttac cgctgttgag
7500atccagttcg atgtaaccca ctcgtgcacc caactgatct tcagcatctt ttactttcac
7560cagcgtttct gggtgagcaa aaacaggaag gcaaaatgcc gcaaaaaagg gaataagggc
7620gacacggaaa tgttgaatac tcatactctt cctttttcaa tattattgaa gcatttatca
7680gggttattgt ctcatgagcg gatacatatt tgaatgtatt tagaaaaata aacaaatagg
7740ggttccgcgc acatttcccc gaaaagtgcc acctgacgtc taagaaacca ttattatcat
7800gacattaacc tataaaaata ggcgtatcac gaggcccttt cgggtcgcgc gtttcggtga
7860tgacggtgaa aacctctgac acatgcagct cccgttgacg gtcacagctt gtctgtaagc
7920ggatgccggg agcagacaag cccgtcaggg cgcgtcagcg ggtgttggcg ggtgtcgggg
7980ctggcttaac tatgcggcat cagagcagat tgtactgaga gtgcaccata aaattgtaaa
8040cgttaatatt ttgttaaaat tcgcgttaaa tttttgttaa atcagctcat tttttaacca
8100ataggccgaa atcggcaaaa tcccttataa atcaaaagaa tagcccgaga tagggttgag
8160tgttgttcca gtttggaaca agagtccact attaaagaac gtggactcca acgtcaaagg
8220gcgaaaaacc gtctatcagg gcgatggccc actacgtgaa ccatcaccca aatcaagttt
8280tttggggtcg aggtgccgta aagcactaaa tcggaaccct aaagggagcc cccgatttag
8340agcttgacgg ggaaagccgg cgaacgtggc gagaaaggaa gggaagaaag cgaaaggagc
8400gggcgctagg gcgctggcaa gtgtagcggt cacgctgcgc gtaaccacca cacccgccgc
8460gcttaatgcg ccgctacagg gcgcgtacta tggttgcttt gacgtatgcg gtgtgaaata
8520ccgcacagat gcgtaaggag aaaataccgc atcaggcgcc attcgccatt caggctgcgc
8580aactgttggg aagggcgatc ggtgcgggcc tcttcgctat tacgccagct ggcgaaaggg
8640ggatgtgctg caaggcgatt aagttgggta acgccagggt tttcccagtc acgacgttgt
8700aaaacgacgg ccagtgaatt ccatggtctc aactttc
8737334086DNAArtificial SequenceSynthetic VLP78_21 (VEEV VLP 519 NPNAx25)
VEEV- NPNAx25 sequence 33atgttcccgt tccagccaat gtatccgatg cagccaatgc
cctatcgcaa cccgttcgcg 60gccccgcgca ggccctggtt ccccagaacc gacccttttc
tggcgatgca ggtgcaggaa 120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc
gggacgcgcc acctgagggg 180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac
agaaaggggg aggccaaggg 240aagaagaaga agaaccaagg gaagaagaag gctaagacag
ggccgcctaa tccgaaggca 300cagaatggaa acaagaagaa gaccaacaag aaaccaggca
agagacagcg catggtcatg 360aaattggaat ctgacaagac gttcccaatc atgttggaag
ggaagataaa cggctacgct 420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg
aaggcaagat cgacaacgac 480gttctggccg cgcttaagac gaagaaagca tccaaatacg
atcttgagta tgcagatgtg 540ccacagaaca tgcgggccga tacattcaaa tacacccatg
agaaacccca aggctattac 600agctggcatc atggagcagt ccaatatgaa aatgggcgtt
tcacggtgcc gaaaggagtt 660ggggccaagg gagacagcgg acgacccatt ctggataacc
agggacgggt ggtcgctatt 720gtgctgggag gtgtgaatga aggatctagg acagcccttt
cagtcgtcat gtggaacgag 780aagggagtta ccgtgaagta tactccagag aactgcgagc
aatggtcact agtgaccacc 840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac
caccaatttg ctacgacaga 900aaaccagcag agactttggc catgctcagc gttaacgttg
acaacccggg ctacgatgag 960ctgctggaag cagctgttaa gtgccccgga aggaaaagga
gatccaccga ggagctgttt 1020aatgagtata agctaacgcg cccttacatg gccagatgca
tcagatgtgc agttgggagc 1080tgccatagtc caatagcaat cgaggcagta aagagcgacg
ggcacgacgg ttatgttaga 1140cttcagactt cctcgcagta tggcctggat tcctccggca
acttaaaggg caggaccatg 1200cggtatgaca tgcacgggac cattaaagag ataccactac
atcaagtgtc actctataca 1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc
tgcttgccag gtgcccggca 1320ggggactcca tcaccatgga atttaagaaa gattccgtca
gacactcctg ctcggtgccg 1380tatgaagtga aatttaatcc tgtaggcaga gaactctata
ctcatccccc agaacacgga 1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga
acagaggagc ttatgtcgag 1500atgcacctcc cgggctcaga agtggacagc agtttggttt
ccttgagcgg cagttccgga 1560ggaaacccga atgccaatcc caacgcgaac cccaacgcta
accccaacgc caatccgaat 1620gcaaacccga acgttgaccc aaacgccaac ccgaatgcca
atcccaacgc gaaccccaat 1680gctaacccaa atgccaaccc aaacgccaac cccaacgcta
atccaaacgc caaccctaac 1740gccaatccca acgcgaatcc taacgctaat cccaacgcaa
atcccaatgc taatccgaac 1800gcgaacccta atgcaaaccc caacgccaac ccgaacgcta
acccgaacgc taatcccaac 1860gccggtggat cctcagtcac cgtgacacct cctgatggga
ctagcgccct ggtggaatgc 1920gagtgtggcg gcacaaagat ctccgagacc atcaacaaga
caaaacagtt cagccagtgc 1980acaaagaagg agcagtgcag agcatatcgg ctgcagaacg
ataagtgggt gtataattct 2040gacaaactgc ccaaagcagc gggagccacc ttaaaaggaa
aactgcatgt cccattcttg 2100ctggcagacg gcaaatgcac cgtgcctcta gcaccagaac
ctatgataac cttcggtttc 2160agatcagtgt cactgaaact gcaccctaag aatcccacat
atctaatcac ccgccaactt 2220gctgatgagc ctcactacac gcacgagctc atatctgaac
cagctgttag gaattttacc 2280gtcaccgaaa aagggtggga gtttgtatgg ggaaaccacc
cgccgaaaag gttttgggca 2340caggaaacag cacccggaaa tccacatggg ctaccgcacg
aggtgataac tcattattac 2400cacagatacc ctatgtccac catcctgggt ttgtcaattt
gtgccgccat tgcaaccgtt 2460tccgttgcag cgtctacctg gctgttttgc agatcaagag
ttgcgtgcct aactccttac 2520cggctaacac ctaacgctag gataccattt tgtctggctg
tgctttgctg cgcccgcact 2580gcccgggccg agaccacctg ggagtccttg gatcacctat
ggaacaataa ccaacagatg 2640ttctggattc aattgctgat ccctctggcc gccttgatcg
tagtgactcg cctgctcagg 2700tgcgtgtgct gtgtcgtgcc ttttttagtc atggccggcg
ccgcaggcgc cggcgcctac 2760gagcacgcga ccacgatgcc gagccaagcg ggaatctcgt
ataacactat agtcaacaga 2820gcaggctacg caccactccc tatcagcata acaccaacaa
agatcaagct gatacctaca 2880gtgaacttgg agtacgtcac ctgccactac aaaacaggaa
tggattcacc agccatcaaa 2940tgctgcggat ctcaggaatg cactccaact tacaggcctg
atgaacagtg caaagtcttc 3000acaggggttt acccgttcat gtggggtggt gcatattgct
tttgcgacac tgagaacacc 3060caagtcagca aggcctacgt aatgaaatct gacgactgcc
ttgcggatca tgctgaagca 3120tataaagcgc acacagcctc agtgcaggcg ttcctcaaca
tcacagtggg agaacactct 3180attgtgacta ccgtgtatgt gaatggagaa actcctgtga
atttcaatgg ggtcaaaata 3240actgcaggtc cgctttccac agcttggaca ccctttgatc
gcaaaatcgt gcagtatgcc 3300ggggagatct ataattatga ttttcctgag tatggggcag
gacaaccagg agcatttgga 3360gatatacaat ccagaacagt ctcaagctct gatctgtatg
ccaataccaa cctagtgctg 3420cagagaccca aagcaggagc gatccacgtg ccatacactc
aggcaccttc gggttttgag 3480caatggaaga aagataaagc tccatcattg aaatttaccg
cccctttcgg atgcgaaata 3540tatacaaacc ccattcgcgc cgaaaactgt gctgtagggt
caattccatt agcctttgac 3600attcccgacg ccttgttcac cagggtgtca gaaacaccga
cactttcagc ggccgaatgc 3660actcttaacg agtgcgtgta ttcttccgac tttggtggga
tcgccacggt caagtactcg 3720gccagcaagt caggcaagtg cgcagtccat gtgccatcag
ggactgctac cctaaaagaa 3780gcagcagtcg agctaaccga gcaagggtcg gcgactatcc
atttctcgac cgcaaatatc 3840cacccggagt tcaggctcca aatatgcaca tcatatgtta
cgtgcaaagg tgattgtcac 3900cccccgaaag accatattgt gacacaccct cagtatcacg
cccaaacatt tacagccgcg 3960gtgtcaaaaa ccgcgtggac gtggttaaca tccctgctgg
gaggatcagc cgtaattatt 4020ataattggct tggtgctggc tactattgtg gccatgtacg
tgctgaccaa ccagaaacat 4080aattaa
4086341361PRTArtificial SequenceSynthetic VLP78_21
(VEEV VLP 519 NPNAx25) sequence 34Met Phe Pro Phe Gln Pro Met Tyr
Pro Met Gln Pro Met Pro Tyr Arg1 5 10
15Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr
Asp Pro 20 25 30Phe Leu Ala
Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn Leu 35
40 45Thr Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu
Gly Pro Ser Ala Asn 50 55 60Lys Pro
Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly65
70 75 80Lys Lys Lys Lys Asn Gln Gly
Lys Lys Lys Ala Lys Thr Gly Pro Pro 85 90
95Asn Pro Lys Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn
Lys Lys Pro 100 105 110Gly Lys
Arg Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys Thr Phe 115
120 125Pro Ile Met Leu Glu Gly Lys Ile Asn Gly
Tyr Ala Cys Val Val Gly 130 135 140Gly
Lys Leu Phe Arg Pro Met His Val Glu Gly Lys Ile Asp Asn Asp145
150 155 160Val Leu Ala Ala Leu Lys
Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu 165
170 175Tyr Ala Asp Val Pro Gln Asn Met Arg Ala Asp Thr
Phe Lys Tyr Thr 180 185 190His
Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala Val Gln 195
200 205Tyr Glu Asn Gly Arg Phe Thr Val Pro
Lys Gly Val Gly Ala Lys Gly 210 215
220Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile225
230 235 240Val Leu Gly Gly
Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val 245
250 255Met Trp Asn Glu Lys Gly Val Thr Val Lys
Tyr Thr Pro Glu Asn Cys 260 265
270Glu Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala Asn Val Thr
275 280 285Phe Pro Cys Ala Gln Pro Pro
Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290 295
300Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn Pro Gly Tyr Asp
Glu305 310 315 320Leu Leu
Glu Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr
325 330 335Glu Glu Leu Phe Asn Glu Tyr
Lys Leu Thr Arg Pro Tyr Met Ala Arg 340 345
350Cys Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile Ala
Ile Glu 355 360 365Ala Val Lys Ser
Asp Gly His Asp Gly Tyr Val Arg Leu Gln Thr Ser 370
375 380Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys
Gly Arg Thr Met385 390 395
400Arg Tyr Asp Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val
405 410 415Ser Leu Tyr Thr Ser
Arg Pro Cys His Ile Val Asp Gly His Gly Tyr 420
425 430Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile
Thr Met Glu Phe 435 440 445Lys Lys
Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His
Pro Pro Glu His Gly465 470 475
480Val Glu Gln Ala Cys Gln Val Tyr Ala His Asp Ala Gln Asn Arg Gly
485 490 495Ala Tyr Val Glu
Met His Leu Pro Gly Ser Glu Val Asp Ser Ser Leu 500
505 510Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro
Asn Ala Asn Pro Asn 515 520 525Ala
Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540Val Asp Pro Asn Ala Asn Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn545 550 555
560Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro
Asn 565 570 575Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 580
585 590Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn 595 600
605Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser 610
615 620Ser Val Thr Val Thr Pro Pro Asp
Gly Thr Ser Ala Leu Val Glu Cys625 630
635 640Glu Cys Gly Gly Thr Lys Ile Ser Glu Thr Ile Asn
Lys Thr Lys Gln 645 650
655Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys Arg Ala Tyr Arg Leu Gln
660 665 670Asn Asp Lys Trp Val Tyr
Asn Ser Asp Lys Leu Pro Lys Ala Ala Gly 675 680
685Ala Thr Leu Lys Gly Lys Leu His Val Pro Phe Leu Leu Ala
Asp Gly 690 695 700Lys Cys Thr Val Pro
Leu Ala Pro Glu Pro Met Ile Thr Phe Gly Phe705 710
715 720Arg Ser Val Ser Leu Lys Leu His Pro Lys
Asn Pro Thr Tyr Leu Ile 725 730
735Thr Arg Gln Leu Ala Asp Glu Pro His Tyr Thr His Glu Leu Ile Ser
740 745 750Glu Pro Ala Val Arg
Asn Phe Thr Val Thr Glu Lys Gly Trp Glu Phe 755
760 765Val Trp Gly Asn His Pro Pro Lys Arg Phe Trp Ala
Gln Glu Thr Ala 770 775 780Pro Gly Asn
Pro His Gly Leu Pro His Glu Val Ile Thr His Tyr Tyr785
790 795 800His Arg Tyr Pro Met Ser Thr
Ile Leu Gly Leu Ser Ile Cys Ala Ala 805
810 815Ile Ala Thr Val Ser Val Ala Ala Ser Thr Trp Leu
Phe Cys Arg Ser 820 825 830Arg
Val Ala Cys Leu Thr Pro Tyr Arg Leu Thr Pro Asn Ala Arg Ile 835
840 845Pro Phe Cys Leu Ala Val Leu Cys Cys
Ala Arg Thr Ala Arg Ala Glu 850 855
860Thr Thr Trp Glu Ser Leu Asp His Leu Trp Asn Asn Asn Gln Gln Met865
870 875 880Phe Trp Ile Gln
Leu Leu Ile Pro Leu Ala Ala Leu Ile Val Val Thr 885
890 895Arg Leu Leu Arg Cys Val Cys Cys Val Val
Pro Phe Leu Val Met Ala 900 905
910Gly Ala Ala Gly Ala Gly Ala Tyr Glu His Ala Thr Thr Met Pro Ser
915 920 925Gln Ala Gly Ile Ser Tyr Asn
Thr Ile Val Asn Arg Ala Gly Tyr Ala 930 935
940Pro Leu Pro Ile Ser Ile Thr Pro Thr Lys Ile Lys Leu Ile Pro
Thr945 950 955 960Val Asn
Leu Glu Tyr Val Thr Cys His Tyr Lys Thr Gly Met Asp Ser
965 970 975Pro Ala Ile Lys Cys Cys Gly
Ser Gln Glu Cys Thr Pro Thr Tyr Arg 980 985
990Pro Asp Glu Gln Cys Lys Val Phe Thr Gly Val Tyr Pro Phe
Met Trp 995 1000 1005Gly Gly Ala
Tyr Cys Phe Cys Asp Thr Glu Asn Thr Gln Val Ser 1010
1015 1020Lys Ala Tyr Val Met Lys Ser Asp Asp Cys Leu
Ala Asp His Ala 1025 1030 1035Glu Ala
Tyr Lys Ala His Thr Ala Ser Val Gln Ala Phe Leu Asn 1040
1045 1050Ile Thr Val Gly Glu His Ser Ile Val Thr
Thr Val Tyr Val Asn 1055 1060 1065Gly
Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr Ala Gly 1070
1075 1080Pro Leu Ser Thr Ala Trp Thr Pro Phe
Asp Arg Lys Ile Val Gln 1085 1090
1095Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr Gly Ala
1100 1105 1110Gly Gln Pro Gly Ala Phe
Gly Asp Ile Gln Ser Arg Thr Val Ser 1115 1120
1125Ser Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg
Pro 1130 1135 1140Lys Ala Gly Ala Ile
His Val Pro Tyr Thr Gln Ala Pro Ser Gly 1145 1150
1155Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu Lys
Phe Thr 1160 1165 1170Ala Pro Phe Gly
Cys Glu Ile Tyr Thr Asn Pro Ile Arg Ala Glu 1175
1180 1185Asn Cys Ala Val Gly Ser Ile Pro Leu Ala Phe
Asp Ile Pro Asp 1190 1195 1200Ala Leu
Phe Thr Arg Val Ser Glu Thr Pro Thr Leu Ser Ala Ala 1205
1210 1215Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser
Ser Asp Phe Gly Gly 1220 1225 1230Ile
Ala Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly Lys Cys Ala 1235
1240 1245Val His Val Pro Ser Gly Thr Ala Thr
Leu Lys Glu Ala Ala Val 1250 1255
1260Glu Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe Ser Thr Ala
1265 1270 1275Asn Ile His Pro Glu Phe
Arg Leu Gln Ile Cys Thr Ser Tyr Val 1280 1285
1290Thr Cys Lys Gly Asp Cys His Pro Pro Lys Asp His Ile Val
Thr 1295 1300 1305His Pro Gln Tyr His
Ala Gln Thr Phe Thr Ala Ala Val Ser Lys 1310 1315
1320Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly Ser
Ala Val 1325 1330 1335Ile Ile Ile Ile
Gly Leu Val Leu Ala Thr Ile Val Ala Met Tyr 1340
1345 1350Val Leu Thr Asn Gln Lys His Asn 1355
1360358509DNAArtificial SequenceSynthetic VLP74_21 (VEEV VLP 519
NPNAx6) sequence 35gaattcccat tgcatacgtt gtatccatat cataatatgt
acatttatat tggctcatgt 60ccaacattac cgccatgttg acattgatta ttgactagtt
attaatagta atcaattacg 120gggtcattag ttcatagccc atatatggag ttccgcgtta
cataacttac ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt
caataatgac gtatgttccc 240atagtaacgc caatagggac tttccattga cgtcaatggg
tggagtattt acggtaaact 300gcccacttgg cagtacatca agtgtatcat atgccaagta
cgccccctat tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc cagtacatga
ccttatggga ctttcctact 420tggcagtaca tctacgtatt agtcatcgct attaccatgg
tgatgcggtt ttggcagtac 480atcaatgggc gtggatagcg gtttgactca cggggatttc
caagtctcca ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat caacgggact
ttccaaaatg tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt
gggaggtcta tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc
cacgctgttt tgacctccat 720agaagacacc gggaccgatc cagcctccgt taacggtgga
gggcagtgta gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac ataatagctg
acagactaac agactgttcc 840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt
gtgatcagat atcgcggccg 900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc
aatgccctat cgcaacccgt 960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc
ttttctggcg atgcaggtgc 1020aggaattaac ccgctcgatg gctaacctga cgttcaagca
acgccgggac gcgccacctg 1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca
aaaacagaaa gggggaggcc 1140aagggaagaa gaagaagaac caagggaaga agaaggctaa
gacagggccg cctaatccga 1200aggcacagaa tggaaacaag aagaagacca acaagaaacc
aggcaagaga cagcgcatgg 1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt
ggaagggaag ataaacggct 1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca
tgtggaaggc aagatcgaca 1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa
atacgatctt gagtatgcag 1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac
ccatgagaaa ccccaaggct 1500attacagctg gcatcatgga gcagtccaat atgaaaatgg
gcgtttcacg gtgccgaaag 1560gagttggggc caagggagac agcggacgac ccattctgga
taaccaggga cgggtggtcg 1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc
cctttcagtc gtcatgtgga 1680acgagaaggg agttaccgtg aagtatactc cagagaactg
cgagcaatgg tcactagtga 1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc
tcaaccacca atttgctacg 1800acagaaaacc agcagagact ttggccatgc tcagcgttaa
cgttgacaac ccgggctacg 1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa
aaggagatcc accgaggagc 1920tgtttaatga gtataagcta acgcgccctt acatggccag
atgcatcaga tgtgcagttg 1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag
cgacgggcac gacggttatg 2040ttagacttca gacttcctcg cagtatggcc tggattcctc
cggcaactta aagggcagga 2100ccatgcggta tgacatgcac gggaccatta aagagatacc
actacatcaa gtgtcactct 2160atacatctcg cccgtgtcac attgtggatg ggcacggtta
tttcctgctt gccaggtgcc 2220cggcagggga ctccatcacc atggaattta agaaagattc
cgtcagacac tcctgctcgg 2280tgccgtatga agtgaaattt aatcctgtag gcagagaact
ctatactcat cccccagaac 2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc
acagaacaga ggagcttatg 2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt
ggtttccttg agcggcagtt 2460ccggaggaaa cccgaatgcc aatcccaacg cgaaccccaa
tgctaaccca aatgccaacc 2520caaacgccaa ccccaacgct ggtggatcct cagtcaccgt
gacacctcct gatgggacta 2580gcgccctggt ggaatgcgag tgtggcggca caaagatctc
cgagaccatc aacaagacaa 2640aacagttcag ccagtgcaca aagaaggagc agtgcagagc
atatcggctg cagaacgata 2700agtgggtgta taattctgac aaactgccca aagcagcggg
agccacctta aaaggaaaac 2760tgcatgtccc attcttgctg gcagacggca aatgcaccgt
gcctctagca ccagaaccta 2820tgataacctt cggtttcaga tcagtgtcac tgaaactgca
ccctaagaat cccacatatc 2880taatcacccg ccaacttgct gatgagcctc actacacgca
cgagctcata tctgaaccag 2940ctgttaggaa ttttaccgtc accgaaaaag ggtgggagtt
tgtatgggga aaccacccgc 3000cgaaaaggtt ttgggcacag gaaacagcac ccggaaatcc
acatgggcta ccgcacgagg 3060tgataactca ttattaccac agatacccta tgtccaccat
cctgggtttg tcaatttgtg 3120ccgccattgc aaccgtttcc gttgcagcgt ctacctggct
gttttgcaga tcaagagttg 3180cgtgcctaac tccttaccgg ctaacaccta acgctaggat
accattttgt ctggctgtgc 3240tttgctgcgc ccgcactgcc cgggccgaga ccacctggga
gtccttggat cacctatgga 3300acaataacca acagatgttc tggattcaat tgctgatccc
tctggccgcc ttgatcgtag 3360tgactcgcct gctcaggtgc gtgtgctgtg tcgtgccttt
tttagtcatg gccggcgccg 3420caggcgccgg cgcctacgag cacgcgacca cgatgccgag
ccaagcggga atctcgtata 3480acactatagt caacagagca ggctacgcac cactccctat
cagcataaca ccaacaaaga 3540tcaagctgat acctacagtg aacttggagt acgtcacctg
ccactacaaa acaggaatgg 3600attcaccagc catcaaatgc tgcggatctc aggaatgcac
tccaacttac aggcctgatg 3660aacagtgcaa agtcttcaca ggggtttacc cgttcatgtg
gggtggtgca tattgctttt 3720gcgacactga gaacacccaa gtcagcaagg cctacgtaat
gaaatctgac gactgccttg 3780cggatcatgc tgaagcatat aaagcgcaca cagcctcagt
gcaggcgttc ctcaacatca 3840cagtgggaga acactctatt gtgactaccg tgtatgtgaa
tggagaaact cctgtgaatt 3900tcaatggggt caaaataact gcaggtccgc tttccacagc
ttggacaccc tttgatcgca 3960aaatcgtgca gtatgccggg gagatctata attatgattt
tcctgagtat ggggcaggac 4020aaccaggagc atttggagat atacaatcca gaacagtctc
aagctctgat ctgtatgcca 4080ataccaacct agtgctgcag agacccaaag caggagcgat
ccacgtgcca tacactcagg 4140caccttcggg ttttgagcaa tggaagaaag ataaagctcc
atcattgaaa tttaccgccc 4200ctttcggatg cgaaatatat acaaacccca ttcgcgccga
aaactgtgct gtagggtcaa 4260ttccattagc ctttgacatt cccgacgcct tgttcaccag
ggtgtcagaa acaccgacac 4320tttcagcggc cgaatgcact cttaacgagt gcgtgtattc
ttccgacttt ggtgggatcg 4380ccacggtcaa gtactcggcc agcaagtcag gcaagtgcgc
agtccatgtg ccatcaggga 4440ctgctaccct aaaagaagca gcagtcgagc taaccgagca
agggtcggcg actatccatt 4500tctcgaccgc aaatatccac ccggagttca ggctccaaat
atgcacatca tatgttacgt 4560gcaaaggtga ttgtcacccc ccgaaagacc atattgtgac
acaccctcag tatcacgccc 4620aaacatttac agccgcggtg tcaaaaaccg cgtggacgtg
gttaacatcc ctgctgggag 4680gatcagccgt aattattata attggcttgg tgctggctac
tattgtggcc atgtacgtgc 4740tgaccaacca gaaacataat taaggatcta gatctgctgt
gccttctagt tgccagccat 4800ctgttgtttg cccctccccc gtgccttcct tgaccctgga
aggtgccact cccactgtcc 4860tttcctaata aaatgaggaa attgcatcgc attgtctgag
taggtgtcat tctattctgg 4920ggggtggggt ggggcaggac agcaaggggg aggattggga
agacaatagc aggcatgctg 4980gggatgcggt gggctctatg ggtacccagg tgctgaagaa
ttgacccggt tcctcctggg 5040ccagaaagaa gcaggcacat ccccttctct gtgacacacc
ctgtccacgc ccctggttct 5100tagttccagc cccactcata ggacactcat agctcaggag
ggctccgcct tcaatcccac 5160ccgctaaagt acttggagcg gtctctccct ccctcatcag
cccaccaaac caaacctagc 5220ctccaagagt gggaagaaat taaagcaaga taggctatta
agtgcagagg gagagaaaat 5280gcctccaaca tgtgaggaag taatgagaga aatcatagaa
ttttaaggcc atgatttaag 5340gccatcatgg cctaagcttg aaaggagata ggatcaaagc
ttggcgtaat catggtcata 5400gctgtttcct gtgtgaaatt gttatccgct cacaattcca
cacaacatac gagccggaag 5460cataaagtgt aaagcctggg gtgcctaatg agtgagctaa
ctcacattaa ttgcgttgcg 5520ctcactgccc gctttccagt cgggaaacct gtcgtgccag
ctgcattaat gaatcggcca 5580acgcgcgggg agaggcggtt tgcgtattgg gcgctcttcc
gcttcctcgc tcactgactc 5640gctgcgctcg gtcgttcggc tgcggcgagc ggtatcagct
cactcaaagg cggtaatacg 5700gttatccaca gaatcagggg ataacgcagg aaagaacatg
tgagcaaaag gccagcaaaa 5760ggccaggaac cgtaaaaagg ccgcgttgct ggcgtttttc
cataggctcc gcccccctga 5820cgagcatcac aaaaatcgac gctcaagtca gaggtggcga
aacccgacag gactataaag 5880ataccaggcg tttccccctg gaagctccct cgtgcgctct
cctgttccga ccctgccgct 5940taccggatac ctgtccgcct ttctcccttc gggaagcgtg
gcgctttctc atagctcacg 6000ctgtaggtat ctcagttcgg tgtaggtcgt tcgctccaag
ctgggctgtg tgcacgaacc 6060ccccgttcag cccgaccgct gcgccttatc cggtaactat
cgtcttgagt ccaacccggt 6120aagacacgac ttatcgccac tggcagcagc cactggtaac
aggattagca gagcgaggta 6180tgtaggcggt gctacagagt tcttgaagtg gtggcctaac
tacggctaca ctagaagaac 6240agtatttggt atctgcgctc tgctgaagcc agttaccttc
ggaaaaagag ttggtagctc 6300ttgatccggc aaacaaacca ccgctggtag cggtggtttt
tttgtttgca agcagcagat 6360tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc
ttttctacgg ggtctgacgc 6420tcagtggaac gaaaactcac gttaagggat tttggtcatg
agattatcaa aaaggatctt 6480cacctagatc cttttaaatt aaaaatgaag ttttaaatca
atctaaagta tatatgagta 6540aacttggtct gacagttacc aatgcttaat cagtgaggca
cctatctcag cgatctgtct 6600atttcgttca tccatagttg cctgactccc cgtcgtgtag
ataactacga tacgggaggg 6660cttaccatct ggccccagtg ctgcaatgat accgcgagaa
ccacgctcac cggctccaga 6720tttatcagca ataaaccagc cagccggaag ggccgagcgc
agaagtggtc ctgcaacttt 6780atccgcctcc atccagtcta ttaattgttg ccgggaagct
agagtaagta gttcgccagt 6840taatagtttg cgcaacgttg ttgccattgc tacaggcatc
gtggtgtcac gctcgtcgtt 6900tggtatggct tcattcagct ccggttccca acgatcaagg
cgagttacat gatcccccat 6960gttgtgcaaa aaagcggtta gctccttcgg tcctccgatc
gttgtcagaa gtaagttggc 7020cgcagtgtta tcactcatgg ttatggcagc actgcataat
tctcttactg tcatgccatc 7080cgtaagatgc ttttctgtga ctggtgagta ctcaaccaag
tcattctgag aatagtgtat 7140gcggcgaccg agttgctctt gcccggcgtc aatacgggat
aataccgcgc cacatagcag 7200aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg
cgaaaactct caaggatctt 7260accgctgttg agatccagtt cgatgtaacc cactcgtgca
cccaactgat cttcagcatc 7320ttttactttc accagcgttt ctgggtgagc aaaaacagga
aggcaaaatg ccgcaaaaaa 7380gggaataagg gcgacacgga aatgttgaat actcatactc
ttcctttttc aatattattg 7440aagcatttat cagggttatt gtctcatgag cggatacata
tttgaatgta tttagaaaaa 7500taaacaaata ggggttccgc gcacatttcc ccgaaaagtg
ccacctgacg tctaagaaac 7560cattattatc atgacattaa cctataaaaa taggcgtatc
acgaggccct ttcgggtcgc 7620gcgtttcggt gatgacggtg aaaacctctg acacatgcag
ctcccgttga cggtcacagc 7680ttgtctgtaa gcggatgccg ggagcagaca agcccgtcag
ggcgcgtcag cgggtgttgg 7740cgggtgtcgg ggctggctta actatgcggc atcagagcag
attgtactga gagtgcacca 7800taaaattgta aacgttaata ttttgttaaa attcgcgtta
aatttttgtt aaatcagctc 7860attttttaac caataggccg aaatcggcaa aatcccttat
aaatcaaaag aatagcccga 7920gatagggttg agtgttgttc cagtttggaa caagagtcca
ctattaaaga acgtggactc 7980caacgtcaaa gggcgaaaaa ccgtctatca gggcgatggc
ccactacgtg aaccatcacc 8040caaatcaagt tttttggggt cgaggtgccg taaagcacta
aatcggaacc ctaaagggag 8100cccccgattt agagcttgac ggggaaagcc ggcgaacgtg
gcgagaaagg aagggaagaa 8160agcgaaagga gcgggcgcta gggcgctggc aagtgtagcg
gtcacgctgc gcgtaaccac 8220cacacccgcc gcgcttaatg cgccgctaca gggcgcgtac
tatggttgct ttgacgtatg 8280cggtgtgaaa taccgcacag atgcgtaagg agaaaatacc
gcatcaggcg ccattcgcca 8340ttcaggctgc gcaactgttg ggaagggcga tcggtgcggg
cctcttcgct attacgccag 8400ctggcgaaag ggggatgtgc tgcaaggcga ttaagttggg
taacgccagg gttttcccag 8460tcacgacgtt gtaaaacgac ggccagtgaa ttccatggtc
tcaactttc 8509363858DNAArtificial SequenceSynthetic
VLP74_21 (VEEV VLP 519 NPNAx6) VEEV- NPNAx6 sequence 36atgttcccgt
tccagccaat gtatccgatg cagccaatgc cctatcgcaa cccgttcgcg 60gccccgcgca
ggccctggtt ccccagaacc gacccttttc tggcgatgca ggtgcaggaa 120ttaacccgct
cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc acctgagggg 180ccatccgcta
ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg aggccaaggg 240aagaagaaga
agaaccaagg gaagaagaag gctaagacag ggccgcctaa tccgaaggca 300cagaatggaa
acaagaagaa gaccaacaag aaaccaggca agagacagcg catggtcatg 360aaattggaat
ctgacaagac gttcccaatc atgttggaag ggaagataaa cggctacgct 420tgtgtggtcg
gagggaagtt attcaggccg atgcatgtgg aaggcaagat cgacaacgac 480gttctggccg
cgcttaagac gaagaaagca tccaaatacg atcttgagta tgcagatgtg 540ccacagaaca
tgcgggccga tacattcaaa tacacccatg agaaacccca aggctattac 600agctggcatc
atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc gaaaggagtt 660ggggccaagg
gagacagcgg acgacccatt ctggataacc agggacgggt ggtcgctatt 720gtgctgggag
gtgtgaatga aggatctagg acagcccttt cagtcgtcat gtggaacgag 780aagggagtta
ccgtgaagta tactccagag aactgcgagc aatggtcact agtgaccacc 840atgtgtctgc
tcgccaatgt gacgttccca tgtgctcaac caccaatttg ctacgacaga 900aaaccagcag
agactttggc catgctcagc gttaacgttg acaacccggg ctacgatgag 960ctgctggaag
cagctgttaa gtgccccgga aggaaaagga gatccaccga ggagctgttt 1020aatgagtata
agctaacgcg cccttacatg gccagatgca tcagatgtgc agttgggagc 1080tgccatagtc
caatagcaat cgaggcagta aagagcgacg ggcacgacgg ttatgttaga 1140cttcagactt
cctcgcagta tggcctggat tcctccggca acttaaaggg caggaccatg 1200cggtatgaca
tgcacgggac cattaaagag ataccactac atcaagtgtc actctataca 1260tctcgcccgt
gtcacattgt ggatgggcac ggttatttcc tgcttgccag gtgcccggca 1320ggggactcca
tcaccatgga atttaagaaa gattccgtca gacactcctg ctcggtgccg 1380tatgaagtga
aatttaatcc tgtaggcaga gaactctata ctcatccccc agaacacgga 1440gtagagcaag
cgtgccaagt ctacgcacat gatgcacaga acagaggagc ttatgtcgag 1500atgcacctcc
cgggctcaga agtggacagc agtttggttt ccttgagcgg cagttccgga 1560ggaaacccga
atgccaatcc caacgcgaac cccaatgcta acccaaatgc caacccaaac 1620gccaacccca
acgctggtgg atcctcagtc accgtgacac ctcctgatgg gactagcgcc 1680ctggtggaat
gcgagtgtgg cggcacaaag atctccgaga ccatcaacaa gacaaaacag 1740ttcagccagt
gcacaaagaa ggagcagtgc agagcatatc ggctgcagaa cgataagtgg 1800gtgtataatt
ctgacaaact gcccaaagca gcgggagcca ccttaaaagg aaaactgcat 1860gtcccattct
tgctggcaga cggcaaatgc accgtgcctc tagcaccaga acctatgata 1920accttcggtt
tcagatcagt gtcactgaaa ctgcacccta agaatcccac atatctaatc 1980acccgccaac
ttgctgatga gcctcactac acgcacgagc tcatatctga accagctgtt 2040aggaatttta
ccgtcaccga aaaagggtgg gagtttgtat ggggaaacca cccgccgaaa 2100aggttttggg
cacaggaaac agcacccgga aatccacatg ggctaccgca cgaggtgata 2160actcattatt
accacagata ccctatgtcc accatcctgg gtttgtcaat ttgtgccgcc 2220attgcaaccg
tttccgttgc agcgtctacc tggctgtttt gcagatcaag agttgcgtgc 2280ctaactcctt
accggctaac acctaacgct aggataccat tttgtctggc tgtgctttgc 2340tgcgcccgca
ctgcccgggc cgagaccacc tgggagtcct tggatcacct atggaacaat 2400aaccaacaga
tgttctggat tcaattgctg atccctctgg ccgccttgat cgtagtgact 2460cgcctgctca
ggtgcgtgtg ctgtgtcgtg ccttttttag tcatggccgg cgccgcaggc 2520gccggcgcct
acgagcacgc gaccacgatg ccgagccaag cgggaatctc gtataacact 2580atagtcaaca
gagcaggcta cgcaccactc cctatcagca taacaccaac aaagatcaag 2640ctgataccta
cagtgaactt ggagtacgtc acctgccact acaaaacagg aatggattca 2700ccagccatca
aatgctgcgg atctcaggaa tgcactccaa cttacaggcc tgatgaacag 2760tgcaaagtct
tcacaggggt ttacccgttc atgtggggtg gtgcatattg cttttgcgac 2820actgagaaca
cccaagtcag caaggcctac gtaatgaaat ctgacgactg ccttgcggat 2880catgctgaag
catataaagc gcacacagcc tcagtgcagg cgttcctcaa catcacagtg 2940ggagaacact
ctattgtgac taccgtgtat gtgaatggag aaactcctgt gaatttcaat 3000ggggtcaaaa
taactgcagg tccgctttcc acagcttgga caccctttga tcgcaaaatc 3060gtgcagtatg
ccggggagat ctataattat gattttcctg agtatggggc aggacaacca 3120ggagcatttg
gagatataca atccagaaca gtctcaagct ctgatctgta tgccaatacc 3180aacctagtgc
tgcagagacc caaagcagga gcgatccacg tgccatacac tcaggcacct 3240tcgggttttg
agcaatggaa gaaagataaa gctccatcat tgaaatttac cgcccctttc 3300ggatgcgaaa
tatatacaaa ccccattcgc gccgaaaact gtgctgtagg gtcaattcca 3360ttagcctttg
acattcccga cgccttgttc accagggtgt cagaaacacc gacactttca 3420gcggccgaat
gcactcttaa cgagtgcgtg tattcttccg actttggtgg gatcgccacg 3480gtcaagtact
cggccagcaa gtcaggcaag tgcgcagtcc atgtgccatc agggactgct 3540accctaaaag
aagcagcagt cgagctaacc gagcaagggt cggcgactat ccatttctcg 3600accgcaaata
tccacccgga gttcaggctc caaatatgca catcatatgt tacgtgcaaa 3660ggtgattgtc
accccccgaa agaccatatt gtgacacacc ctcagtatca cgcccaaaca 3720tttacagccg
cggtgtcaaa aaccgcgtgg acgtggttaa catccctgct gggaggatca 3780gccgtaatta
ttataattgg cttggtgctg gctactattg tggccatgta cgtgctgacc 3840aaccagaaac
ataattaa
3858371285PRTArtificial SequenceSynthetic VLP74_21 (VEEV VLP 519 NPNAx6)
sequence 37Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro
Tyr Arg1 5 10 15Asn Pro
Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30Phe Leu Ala Met Gln Val Gln Glu Leu
Thr Arg Ser Met Ala Asn Leu 35 40
45Thr Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60Lys Pro Lys Lys Glu Ala Ser Gln Lys
Gln Lys Gly Gly Gly Gln Gly65 70 75
80Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly
Pro Pro 85 90 95Asn Pro
Lys Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110Gly Lys Arg Gln Arg Met Val Met Lys
Leu Glu Ser Asp Lys Thr Phe 115 120
125Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly
130 135 140Gly Lys Leu Phe Arg Pro Met
His Val Glu Gly Lys Ile Asp Asn Asp145 150
155 160Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys
Tyr Asp Leu Glu 165 170
175Tyr Ala Asp Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr
180 185 190His Glu Lys Pro Gln Gly
Tyr Tyr Ser Trp His His Gly Ala Val Gln 195 200
205Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala
Lys Gly 210 215 220Asp Ser Gly Arg Pro
Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile225 230
235 240Val Leu Gly Gly Val Asn Glu Gly Ser Arg
Thr Ala Leu Ser Val Val 245 250
255Met Trp Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys
260 265 270Glu Gln Trp Ser Leu
Val Thr Thr Met Cys Leu Leu Ala Asn Val Thr 275
280 285Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg
Lys Pro Ala Glu 290 295 300Thr Leu Ala
Met Leu Ser Val Asn Val Asp Asn Pro Gly Tyr Asp Glu305
310 315 320Leu Leu Glu Ala Ala Val Lys
Cys Pro Gly Arg Lys Arg Arg Ser Thr 325
330 335Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro
Tyr Met Ala Arg 340 345 350Cys
Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile Ala Ile Glu 355
360 365Ala Val Lys Ser Asp Gly His Asp Gly
Tyr Val Arg Leu Gln Thr Ser 370 375
380Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met385
390 395 400Arg Tyr Asp Met
His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val 405
410 415Ser Leu Tyr Thr Ser Arg Pro Cys His Ile
Val Asp Gly His Gly Tyr 420 425
430Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe
435 440 445Lys Lys Asp Ser Val Arg His
Ser Cys Ser Val Pro Tyr Glu Val Lys 450 455
460Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His
Gly465 470 475 480Val Glu
Gln Ala Cys Gln Val Tyr Ala His Asp Ala Gln Asn Arg Gly
485 490 495Ala Tyr Val Glu Met His Leu
Pro Gly Ser Glu Val Asp Ser Ser Leu 500 505
510Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn Ala Asn
Pro Asn 515 520 525Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540Ala Gly Gly Ser Ser Val Thr Val Thr Pro Pro Asp
Gly Thr Ser Ala545 550 555
560Leu Val Glu Cys Glu Cys Gly Gly Thr Lys Ile Ser Glu Thr Ile Asn
565 570 575Lys Thr Lys Gln Phe
Ser Gln Cys Thr Lys Lys Glu Gln Cys Arg Ala 580
585 590Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr Asn Ser
Asp Lys Leu Pro 595 600 605Lys Ala
Ala Gly Ala Thr Leu Lys Gly Lys Leu His Val Pro Phe Leu 610
615 620Leu Ala Asp Gly Lys Cys Thr Val Pro Leu Ala
Pro Glu Pro Met Ile625 630 635
640Thr Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys Asn Pro
645 650 655Thr Tyr Leu Ile
Thr Arg Gln Leu Ala Asp Glu Pro His Tyr Thr His 660
665 670Glu Leu Ile Ser Glu Pro Ala Val Arg Asn Phe
Thr Val Thr Glu Lys 675 680 685Gly
Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys Arg Phe Trp Ala 690
695 700Gln Glu Thr Ala Pro Gly Asn Pro His Gly
Leu Pro His Glu Val Ile705 710 715
720Thr His Tyr Tyr His Arg Tyr Pro Met Ser Thr Ile Leu Gly Leu
Ser 725 730 735Ile Cys Ala
Ala Ile Ala Thr Val Ser Val Ala Ala Ser Thr Trp Leu 740
745 750Phe Cys Arg Ser Arg Val Ala Cys Leu Thr
Pro Tyr Arg Leu Thr Pro 755 760
765Asn Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala Arg Thr 770
775 780Ala Arg Ala Glu Thr Thr Trp Glu
Ser Leu Asp His Leu Trp Asn Asn785 790
795 800Asn Gln Gln Met Phe Trp Ile Gln Leu Leu Ile Pro
Leu Ala Ala Leu 805 810
815Ile Val Val Thr Arg Leu Leu Arg Cys Val Cys Cys Val Val Pro Phe
820 825 830Leu Val Met Ala Gly Ala
Ala Gly Ala Gly Ala Tyr Glu His Ala Thr 835 840
845Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr Asn Thr Ile Val
Asn Arg 850 855 860Ala Gly Tyr Ala Pro
Leu Pro Ile Ser Ile Thr Pro Thr Lys Ile Lys865 870
875 880Leu Ile Pro Thr Val Asn Leu Glu Tyr Val
Thr Cys His Tyr Lys Thr 885 890
895Gly Met Asp Ser Pro Ala Ile Lys Cys Cys Gly Ser Gln Glu Cys Thr
900 905 910Pro Thr Tyr Arg Pro
Asp Glu Gln Cys Lys Val Phe Thr Gly Val Tyr 915
920 925Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp
Thr Glu Asn Thr 930 935 940Gln Val Ser
Lys Ala Tyr Val Met Lys Ser Asp Asp Cys Leu Ala Asp945
950 955 960His Ala Glu Ala Tyr Lys Ala
His Thr Ala Ser Val Gln Ala Phe Leu 965
970 975Asn Ile Thr Val Gly Glu His Ser Ile Val Thr Thr
Val Tyr Val Asn 980 985 990Gly
Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr Ala Gly Pro 995
1000 1005Leu Ser Thr Ala Trp Thr Pro Phe
Asp Arg Lys Ile Val Gln Tyr 1010 1015
1020Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr Gly Ala Gly
1025 1030 1035Gln Pro Gly Ala Phe Gly
Asp Ile Gln Ser Arg Thr Val Ser Ser 1040 1045
1050Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg Pro
Lys 1055 1060 1065Ala Gly Ala Ile His
Val Pro Tyr Thr Gln Ala Pro Ser Gly Phe 1070 1075
1080Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu Lys Phe
Thr Ala 1085 1090 1095Pro Phe Gly Cys
Glu Ile Tyr Thr Asn Pro Ile Arg Ala Glu Asn 1100
1105 1110Cys Ala Val Gly Ser Ile Pro Leu Ala Phe Asp
Ile Pro Asp Ala 1115 1120 1125Leu Phe
Thr Arg Val Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu 1130
1135 1140Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser
Asp Phe Gly Gly Ile 1145 1150 1155Ala
Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly Lys Cys Ala Val 1160
1165 1170His Val Pro Ser Gly Thr Ala Thr Leu
Lys Glu Ala Ala Val Glu 1175 1180
1185Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe Ser Thr Ala Asn
1190 1195 1200Ile His Pro Glu Phe Arg
Leu Gln Ile Cys Thr Ser Tyr Val Thr 1205 1210
1215Cys Lys Gly Asp Cys His Pro Pro Lys Asp His Ile Val Thr
His 1220 1225 1230Pro Gln Tyr His Ala
Gln Thr Phe Thr Ala Ala Val Ser Lys Thr 1235 1240
1245Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly Ser Ala
Val Ile 1250 1255 1260Ile Ile Ile Gly
Leu Val Leu Ala Thr Ile Val Ala Met Tyr Val 1265
1270 1275Leu Thr Asn Gln Lys His Asn 1280
1285387305DNAArtificial SequenceSynthetic VLP74_15 (CHI VLP 532
NPNAx6) sequence 38tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat
gcagctcccg gagacggtca 60cagcttgtct gtaagcggat gccgggagca gacaagcccg
tcagggcgcg tcagcgggtg 120ttggcgggtg tcggggctgg cttaactatg cggcatcaga
gcagattgta ctgagagtgc 180accatatgcg gtgtgaaata ccgcacagat gcgtaaggag
aaaataccgc atcaggcgcc 240attcgccatt caggctgcgc aactgttggg aagggcgatc
ggtgcgggcc tcttcgctat 300tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt
aagttgggta acgccagggt 360tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt
gacgcgtgtt ggcattgatt 420attgactagt tattaatagt aatcaattac ggggtcatta
gttcatagcc catatatgga 480gttccgcgtt acataactta cggtaaatgg cccgcctggc
tgaccgccca acgacccccg 540cccattgacg tcaataatga cgtatgttcc catagtaacg
ccaataggga ctttccattg 600acgtcaatgg gtggagtatt tacggtaaac tgcccacttg
gcagtacatc aagtgtatca 660tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa
tggcccgcct ggcattatgc 720ccagtacatg accttatggg actttcctac ttggcagtac
atctacgtat tagtcatcgc 780tattaccatg gtgatgcggt tttggcagta catcaatggg
cgtggatagc ggtttgactc 840acggggattt ccaagtctcc accccattga cgtcaatggg
agtttgtttt ggcaccaaaa 900tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca
ttgacgcaaa tgggcggtag 960gcgtgtacgg tgggaggtct atataagcag agctcgttta
gtgaaccgtc agataactgc 1020aggtcgacga tatcgcggcc gccaccatgg agttcatccc
gacgcaaact ttctataaca 1080gaaggtacca accccgaccc tgggccccac gccctacaat
tcaagtaatt agacctagac 1140cacgtccaca gaggcaggct gggcaactcg cccagctgat
ctccgcagtc aacaaattga 1200ccatgcgcgc ggtacctcaa cagaagcctc gcagaaatcg
gaaaaacaag aagcaaaggc 1260agaagaagca ggcgccgcaa aacgacccaa agcaaaagaa
gcaaccacca caaaagaagc 1320cggctcaaaa gaagaagaaa ccaggccgta gggagagaat
gtgcatgaaa attgaaaatg 1380attgcatctt cgaagtcaag catgaaggca aagtgatggg
ctacgcatgc ctggtggggg 1440ataaagtaat gaaaccagca catgtgaagg gaactatcga
caatgccgat ctggctaaac 1500tggcctttaa gcggtcgtct aaatacgatc ttgaatgtgc
acagataccg gtgcacatga 1560agtctgatgc ctcgaagttt acccacgaga aacccgaggg
gtactataac tggcatcacg 1620gagcagtgca gtattcagga ggccggttca ctatcccgac
gggtgcaggc aagccgggag 1680acagcggcag accgatcttc gacaacaaag gacgggtggt
ggccatcgtc ctaggagggg 1740ccaacgaagg tgcccgcacg gccctctccg tggtgacgtg
gaacaaagac atcgtcacaa 1800aaattacccc tgagggagcc gaagagtgga gcctcgccct
cccggtcttg tgcctgttgg 1860caaacactac attcccctgc tctcagccgc cttgcacacc
ctgctgctac gaaaaggaac 1920cggaaagcac cttgcgcatg cttgaggaca acgtgatgag
acccggatac taccagctac 1980taaaagcatc gctgacttgc tctccccacc gccaaagacg
cagtactaag gacaatttta 2040atgtctataa agccacaaga ccatatctag ctcattgtcc
tgactgcgga gaagggcatt 2100cgtgccacag ccctatcgca ttggagcgca tcagaaatga
agcaacggac ggaacgctga 2160aaatccaggt ctctttgcag atcgggataa agacagatga
cagccacgat tggaccaagc 2220tgcgctatat ggatagccat acgccagcgg acgcggagcg
agccggattg cttgtaagga 2280cttcagcacc gtgcacgatc accgggacca tgggacactt
tattctcgcc cgatgcccga 2340aaggagagac gctgacagtg ggatttacgg acagcagaaa
gatcagccac acatgcacac 2400acccgttcca tcatgaacca cctgtgatag gtagggagag
gttccactct cgaccacaac 2460atggtaaaga gttaccttgc agcacgtacg tgcagagcac
cgctgccact gctgaggaga 2520tagaggtgca tatgccccca gatactcctg accgcacgct
gatgacgcag cagtctggca 2580acgtgaagat cacagttaat gggcagacgg tgcggtacaa
gtgcaactgc ggtggctccg 2640gaggaaaccc gaatgccaat cccaacgcga accccaatgc
taacccaaat gccaacccaa 2700acgccaaccc caacgctggt ggatccaacg agggactgac
aaccacagac aaagtgatca 2760ataactgcaa aattgatcag tgccatgctg cagtcactaa
tcacaagaat tggcaataca 2820actccccttt agtcccgcgc aacgctgaac tcggggaccg
taaaggaaag atccacatcc 2880cattcccatt ggcaaacgtg acttgcagag tgccaaaagc
aagaaaccct acagtaactt 2940acggaaaaaa ccaagtcacc atgctgctgt atcctgacca
tccgacactc ttgtcttacc 3000gtaacatggg acaggaacca aattaccacg aggagtgggt
gacacacaag aaggaggtta 3060ccttgaccgt gcctactgag ggtctggagg tcacttgggg
caacaacgaa ccatacaagt 3120actggccgca gatgtctacg aacggtactg ctcatggtca
cccacatgag ataatcttgt 3180actattatga gctgtacccc actatgactg tagtcattgt
gtcggtggcc tcgttcgtgc 3240ttctgtcgat ggtgggcaca gcagtgggaa tgtgtgtgtg
cgcacggcgc agatgcatta 3300caccatatga attaacacca ggagccactg ttcccttcct
gctcagcctg ctatgctgcg 3360tcagaacgac caaggcggcc acatattacg aggctgcggc
atatctatgg aacgaacagc 3420agcccctgtt ctggttgcag gctcttatcc cgctggccgc
cttgatcgtc ctgtgcaact 3480gtctgaaact cttgccatgc tgctgtaaga ccctggcttt
tttagccgta atgagcatcg 3540gtgcccacac tgtgagcgcg tacgaacacg taacagtgat
cccgaacacg gtgggagtac 3600cgtataagac tcttgtcaac agaccgggtt acagccccat
ggtgttggag atggagctac 3660aatcagtcac cttggaacca acactgtcac ttgactacat
cacgtgcgag tacaaaactg 3720tcatcccctc cccgtacgtg aagtgctgtg gtacagcaga
gtgcaaggac aagagcctac 3780cagactacag ctgcaaggtc tttactggag tctacccatt
tatgtggggc ggcgcctact 3840gcttttgcga cgccgaaaat acgcaattga gcgaggcaca
tgtagagaaa tctgaatctt 3900gcaaaacaga gtttgcatcg gcctacagag cccacaccgc
atcggcgtcg gcgaagctcc 3960gcgtccttta ccaaggaaac aacattaccg tagctgccta
cgctaacggt gaccatgccg 4020tcacagtaaa ggacgccaag tttgtcgtgg gcccaatgtc
ctccgcctgg acaccttttg 4080acaacaaaat cgtggtgtac aaaggcgacg tctacaacat
ggactaccca ccttttggcg 4140caggaagacc aggacaattt ggtgacattc aaagtcgtac
accggaaagt aaagacgttt 4200atgccaacac tcagttggta ctacagaggc cagcagcagg
cacggtacat gtaccatact 4260ctcaggcacc atctggcttc aagtattggc tgaaggaacg
aggagcatcg ctacagcaca 4320cggcaccgtt cggttgccag attgcgacaa acccggtaag
agctgtaaat tgcgctgtgg 4380ggaacatacc aatttccatc gacataccgg atgcggcctt
tactagggtt gtcgatgcac 4440cctctgtaac ggacatgtca tgcgaagtac cagcctgcac
tcactcctcc gactttgggg 4500gcgtcgccat catcaaatac acagctagca agaaaggtaa
atgtgcagta cattcgatga 4560ccaacgccgt taccattcga gaagccgacg tagaagtaga
ggggaactcc cagctgcaaa 4620tatccttctc aacagccctg gcaagcgccg agtttcgcgt
gcaagtgtgc tccacacaag 4680tacactgcgc agccgcatgc caccctccaa aggaccacat
agtcaattac ccagcatcac 4740acaccaccct tggggtccag gatatatcca caacggcaat
gtcttgggtg cagaagatta 4800cgggaggagt aggattaatt gttgctgttg ctgccttaat
tttaattgtg gtgctatgcg 4860tgtcgtttag caggcactaa ggatctagat ctgctgtgcc
ttctagttgc cagccatctg 4920ttgtttgccc ctcccccgtg ccttccttga ccctggaagg
tgccactccc actgtccttt 4980cctaataaaa tgaggaaatt gcatcgcatt gtctgagtag
gtgtcattct attctggggg 5040gtggggtggg gcaggacagc aagggggagg attgggaaga
caatagcagg catgctgggg 5100atgcggtggg ctctatggct cgagcatggt catagctgtt
tcctgtgtga aattgttatc 5160cgctcacaat tccacacaac atacgagccg gaagcataaa
gtgtaaagcc tggggtgcct 5220aatgagtgag ctaactcaca ttaattgcgt tgcgctcact
gcccgctttc cagtcgggaa 5280acctgtcgtg ccagctgcat taatgaatcg gccaacgcgc
ggggagaggc ggtttgcgta 5340ttgggcgctc ttccgcttcc tcgctcactg actcgctgcg
ctcggtcgtt cggctgcggc 5400gagcggtatc agctcactca aaggcggtaa tacggttatc
cacagaatca ggggataacg 5460caggaaagaa catgtgagca aaaggccagc aaaaggccag
gaaccgtaaa aaggccgcgt 5520tgctggcgtt tttccatagg ctccgccccc ctgacgagca
tcacaaaaat cgacgctcaa 5580gtcagaggtg gcgaaacccg acaggactat aaagatacca
ggcgtttccc cctggaagct 5640ccctcgtgcg ctctcctgtt ccgaccctgc cgcttaccgg
atacctgtcc gcctttctcc 5700cttcgggaag cgtggcgctt tctcatagct cacgctgtag
gtatctcagt tcggtgtagg 5760tcgttcgctc caagctgggc tgtgtgcacg aaccccccgt
tcagcccgac cgctgcgcct 5820tatccggtaa ctatcgtctt gagtccaacc cggtaagaca
cgacttatcg ccactggcag 5880cagccactgg taacaggatt agcagagcga ggtatgtagg
cggtgctaca gagttcttga 5940agtggtggcc taactacggc tacactagaa gaacagtatt
tggtatctgc gctctgctga 6000agccagttac cttcggaaaa agagttggta gctcttgatc
cggcaaacaa accaccgctg 6060gtagcggtgg tttttttgtt tgcaagcagc agattacgcg
cagaaaaaaa ggatctcaag 6120aagatccttt gatcttttct acggggtctg acgctcagtg
gaacgaaaac tcacgttaag 6180ggattttggt catgagatta tcaaaaagga tcttcaccta
gatcctttta aattaaaaat 6240gaagttttaa atcaatctaa agtatatatg agtaaacttg
gtctgacagt tagaaaaact 6300catcgagcat caaatgaaac tgcaatttat tcatatcagg
attatcaata ccatattttt 6360gaaaaagccg tttctgtaat gaaggagaaa actcaccgag
gcagttccat aggatggcaa 6420gatcctggta tcggtctgcg attccgactc gtccaacatc
aatacaacct attaatttcc 6480cctcgtcaaa aataaggtta tcaagtgaga aatcaccatg
agtgacgact gaatccggtg 6540agaatggcaa aagtttatgc atttctttcc agacttgttc
aacaggccag ccattacgct 6600cgtcatcaaa atcactcgca tcaaccaaac cgttattcat
tcgtgattgc gcctgagcga 6660gacgaaatac gcgatcgctg ttaaaaggac aattacaaac
aggaatcgaa tgcaaccggc 6720gcaggaacac tgccagcgca tcaacaatat tttcacctga
atcaggatat tcttctaata 6780cctggaatgc tgttttccca gggatcgcag tggtgagtaa
ccatgcatca tcaggagtac 6840ggataaaatg cttgatggtc ggaagaggca taaattccgt
cagccagttt agtctgacca 6900tctcatctgt aacatcattg gcaacgctac ctttgccatg
tttcagaaac aactctggcg 6960catcgggctt cccatacaat cgatagattg tcgcacctga
ttgcccgaca ttatcgcgag 7020cccatttata cccatataaa tcagcatcca tgttggaatt
taatcgcggc ctagagcaag 7080acgtttcccg ttgaatatgg ctcatactct tcctttttca
atattattga agcatttatc 7140agggttattg tctcatgagc ggatacatat ttgaatgtat
ttagaaaaat aaacaaatag 7200gggttccgcg cacatttccc cgaaaagtgc cacctgacgt
ctaagaaacc attattatca 7260tgacattaac ctataaaaat aggcgtatca cgaggccctt
tcgtc 7305391277PRTArtificial SequenceSynthetic
VLP74_15 (CHI VLP 532 NPNAx6) sequence 39Met Glu Phe Ile Pro Thr Gln
Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1 5 10
15Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val Ile Arg
Pro Arg Pro 20 25 30Arg Pro
Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val 35
40 45Asn Lys Leu Thr Met Arg Ala Val Pro Gln
Gln Lys Pro Arg Arg Asn 50 55 60Arg
Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp65
70 75 80Pro Lys Gln Lys Lys Gln
Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys 85
90 95Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys
Ile Glu Asn Asp 100 105 110Cys
Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys 115
120 125Leu Val Gly Asp Lys Val Met Lys Pro
Ala His Val Lys Gly Thr Ile 130 135
140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr145
150 155 160Asp Leu Glu Cys
Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser 165
170 175Lys Phe Thr His Glu Lys Pro Glu Gly Tyr
Tyr Asn Trp His His Gly 180 185
190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly
195 200 205Lys Pro Gly Asp Ser Gly Arg
Pro Ile Phe Asp Asn Lys Gly Arg Val 210 215
220Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala
Leu225 230 235 240Ser Val
Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255Gly Ala Glu Glu Trp Ser Leu
Ala Leu Pro Val Leu Cys Leu Leu Ala 260 265
270Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys
Cys Tyr 275 280 285Glu Lys Glu Pro
Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala Ser Leu
Thr Cys Ser Pro305 310 315
320His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala
325 330 335Thr Arg Pro Tyr Leu
Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350Cys His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn
Glu Ala Thr Asp 355 360 365Gly Thr
Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met
Asp Ser His Thr Pro385 390 395
400Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys
405 410 415Thr Ile Thr Gly
Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser
Arg Lys Ile Ser His 435 440 445Thr
Cys Thr His Pro Phe His His Glu Pro Pro Val Ile Gly Arg Glu 450
455 460Arg Phe His Ser Arg Pro Gln His Gly Lys
Glu Leu Pro Cys Ser Thr465 470 475
480Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His
Met 485 490 495Pro Pro Asp
Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn 500
505 510Val Lys Ile Thr Val Asn Gly Gln Thr Val
Arg Tyr Lys Cys Asn Cys 515 520
525Gly Gly Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Gly Gly Ser545 550
555 560Asn Glu Gly Leu Thr Thr Thr Asp Lys Val Ile Asn
Asn Cys Lys Ile 565 570
575Asp Gln Cys His Ala Ala Val Thr Asn His Lys Asn Trp Gln Tyr Asn
580 585 590Ser Pro Leu Val Pro Arg
Asn Ala Glu Leu Gly Asp Arg Lys Gly Lys 595 600
605Ile His Ile Pro Phe Pro Leu Ala Asn Val Thr Cys Arg Val
Pro Lys 610 615 620Ala Arg Asn Pro Thr
Val Thr Tyr Gly Lys Asn Gln Val Thr Met Leu625 630
635 640Leu Tyr Pro Asp His Pro Thr Leu Leu Ser
Tyr Arg Asn Met Gly Gln 645 650
655Glu Pro Asn Tyr His Glu Glu Trp Val Thr His Lys Lys Glu Val Thr
660 665 670Leu Thr Val Pro Thr
Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu 675
680 685Pro Tyr Lys Tyr Trp Pro Gln Met Ser Thr Asn Gly
Thr Ala His Gly 690 695 700His Pro His
Glu Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr Pro Thr Met705
710 715 720Thr Val Val Ile Val Ser Val
Ala Ser Phe Val Leu Leu Ser Met Val 725
730 735Gly Thr Ala Val Gly Met Cys Val Cys Ala Arg Arg
Arg Cys Ile Thr 740 745 750Pro
Tyr Glu Leu Thr Pro Gly Ala Thr Val Pro Phe Leu Leu Ser Leu 755
760 765Leu Cys Cys Val Arg Thr Thr Lys Ala
Ala Thr Tyr Tyr Glu Ala Ala 770 775
780Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp Leu Gln Ala Leu785
790 795 800Ile Pro Leu Ala
Ala Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu 805
810 815Pro Cys Cys Cys Lys Thr Leu Ala Phe Leu
Ala Val Met Ser Ile Gly 820 825
830Ala His Thr Val Ser Ala Tyr Glu His Val Thr Val Ile Pro Asn Thr
835 840 845Val Gly Val Pro Tyr Lys Thr
Leu Val Asn Arg Pro Gly Tyr Ser Pro 850 855
860Met Val Leu Glu Met Glu Leu Gln Ser Val Thr Leu Glu Pro Thr
Leu865 870 875 880Ser Leu
Asp Tyr Ile Thr Cys Glu Tyr Lys Thr Val Ile Pro Ser Pro
885 890 895Tyr Val Lys Cys Cys Gly Thr
Ala Glu Cys Lys Asp Lys Ser Leu Pro 900 905
910Asp Tyr Ser Cys Lys Val Phe Thr Gly Val Tyr Pro Phe Met
Trp Gly 915 920 925Gly Ala Tyr Cys
Phe Cys Asp Ala Glu Asn Thr Gln Leu Ser Glu Ala 930
935 940His Val Glu Lys Ser Glu Ser Cys Lys Thr Glu Phe
Ala Ser Ala Tyr945 950 955
960Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val Leu Tyr Gln
965 970 975Gly Asn Asn Ile Thr
Val Ala Ala Tyr Ala Asn Gly Asp His Ala Val 980
985 990Thr Val Lys Asp Ala Lys Phe Val Val Gly Pro Met
Ser Ser Ala Trp 995 1000 1005Thr
Pro Phe Asp Asn Lys Ile Val Val Tyr Lys Gly Asp Val Tyr 1010
1015 1020Asn Met Asp Tyr Pro Pro Phe Gly Ala
Gly Arg Pro Gly Gln Phe 1025 1030
1035Gly Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr Ala
1040 1045 1050Asn Thr Gln Leu Val Leu
Gln Arg Pro Ala Ala Gly Thr Val His 1055 1060
1065Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp Leu
Lys 1070 1075 1080Glu Arg Gly Ala Ser
Leu Gln His Thr Ala Pro Phe Gly Cys Gln 1085 1090
1095Ile Ala Thr Asn Pro Val Arg Ala Val Asn Cys Ala Val
Gly Asn 1100 1105 1110Ile Pro Ile Ser
Ile Asp Ile Pro Asp Ala Ala Phe Thr Arg Val 1115
1120 1125Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys
Glu Val Pro Ala 1130 1135 1140Cys Thr
His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys Tyr 1145
1150 1155Thr Ala Ser Lys Lys Gly Lys Cys Ala Val
His Ser Met Thr Asn 1160 1165 1170Ala
Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn Ser 1175
1180 1185Gln Leu Gln Ile Ser Phe Ser Thr Ala
Leu Ala Ser Ala Glu Phe 1190 1195
1200Arg Val Gln Val Cys Ser Thr Gln Val His Cys Ala Ala Ala Cys
1205 1210 1215His Pro Pro Lys Asp His
Ile Val Asn Tyr Pro Ala Ser His Thr 1220 1225
1230Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser Trp
Val 1235 1240 1245Gln Lys Ile Thr Gly
Gly Val Gly Leu Ile Val Ala Val Ala Ala 1250 1255
1260Leu Ile Leu Ile Val Val Leu Cys Val Ser Phe Ser Arg
His 1265 1270 1275407533DNAArtificial
SequenceSynthetic VLP78_15 (CHI VLP 532 NPNAx25) sequence
40tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg gagacggtca
60cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg tcagcgggtg
120ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta ctgagagtgc
180accatatgcg gtgtgaaata ccgcacagat gcgtaaggag aaaataccgc atcaggcgcc
240attcgccatt caggctgcgc aactgttggg aagggcgatc ggtgcgggcc tcttcgctat
300tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt aagttgggta acgccagggt
360tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt gacgcgtgtt ggcattgatt
420attgactagt tattaatagt aatcaattac ggggtcatta gttcatagcc catatatgga
480gttccgcgtt acataactta cggtaaatgg cccgcctggc tgaccgccca acgacccccg
540cccattgacg tcaataatga cgtatgttcc catagtaacg ccaataggga ctttccattg
600acgtcaatgg gtggagtatt tacggtaaac tgcccacttg gcagtacatc aagtgtatca
660tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa tggcccgcct ggcattatgc
720ccagtacatg accttatggg actttcctac ttggcagtac atctacgtat tagtcatcgc
780tattaccatg gtgatgcggt tttggcagta catcaatggg cgtggatagc ggtttgactc
840acggggattt ccaagtctcc accccattga cgtcaatggg agtttgtttt ggcaccaaaa
900tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca ttgacgcaaa tgggcggtag
960gcgtgtacgg tgggaggtct atataagcag agctcgttta gtgaaccgtc agataactgc
1020aggtcgacga tatcgcggcc gccaccatgg agttcatccc gacgcaaact ttctataaca
1080gaaggtacca accccgaccc tgggccccac gccctacaat tcaagtaatt agacctagac
1140cacgtccaca gaggcaggct gggcaactcg cccagctgat ctccgcagtc aacaaattga
1200ccatgcgcgc ggtacctcaa cagaagcctc gcagaaatcg gaaaaacaag aagcaaaggc
1260agaagaagca ggcgccgcaa aacgacccaa agcaaaagaa gcaaccacca caaaagaagc
1320cggctcaaaa gaagaagaaa ccaggccgta gggagagaat gtgcatgaaa attgaaaatg
1380attgcatctt cgaagtcaag catgaaggca aagtgatggg ctacgcatgc ctggtggggg
1440ataaagtaat gaaaccagca catgtgaagg gaactatcga caatgccgat ctggctaaac
1500tggcctttaa gcggtcgtct aaatacgatc ttgaatgtgc acagataccg gtgcacatga
1560agtctgatgc ctcgaagttt acccacgaga aacccgaggg gtactataac tggcatcacg
1620gagcagtgca gtattcagga ggccggttca ctatcccgac gggtgcaggc aagccgggag
1680acagcggcag accgatcttc gacaacaaag gacgggtggt ggccatcgtc ctaggagggg
1740ccaacgaagg tgcccgcacg gccctctccg tggtgacgtg gaacaaagac atcgtcacaa
1800aaattacccc tgagggagcc gaagagtgga gcctcgccct cccggtcttg tgcctgttgg
1860caaacactac attcccctgc tctcagccgc cttgcacacc ctgctgctac gaaaaggaac
1920cggaaagcac cttgcgcatg cttgaggaca acgtgatgag acccggatac taccagctac
1980taaaagcatc gctgacttgc tctccccacc gccaaagacg cagtactaag gacaatttta
2040atgtctataa agccacaaga ccatatctag ctcattgtcc tgactgcgga gaagggcatt
2100cgtgccacag ccctatcgca ttggagcgca tcagaaatga agcaacggac ggaacgctga
2160aaatccaggt ctctttgcag atcgggataa agacagatga cagccacgat tggaccaagc
2220tgcgctatat ggatagccat acgccagcgg acgcggagcg agccggattg cttgtaagga
2280cttcagcacc gtgcacgatc accgggacca tgggacactt tattctcgcc cgatgcccga
2340aaggagagac gctgacagtg ggatttacgg acagcagaaa gatcagccac acatgcacac
2400acccgttcca tcatgaacca cctgtgatag gtagggagag gttccactct cgaccacaac
2460atggtaaaga gttaccttgc agcacgtacg tgcagagcac cgctgccact gctgaggaga
2520tagaggtgca tatgccccca gatactcctg accgcacgct gatgacgcag cagtctggca
2580acgtgaagat cacagttaat gggcagacgg tgcggtacaa gtgcaactgc ggtggctccg
2640gaggaaaccc gaatgccaat cccaacgcga accccaacgc taaccccaac gccaatccga
2700atgcaaaccc gaacgttgac ccaaacgcca acccgaatgc caatcccaac gcgaacccca
2760atgctaaccc aaatgccaac ccaaacgcca accccaacgc taatccaaac gccaacccta
2820acgccaatcc caacgcgaat cctaacgcta atcccaacgc aaatcccaat gctaatccga
2880acgcgaaccc taatgcaaac cccaacgcca acccgaacgc taacccgaac gctaatccca
2940acgccggtgg atccaacgag ggactgacaa ccacagacaa agtgatcaat aactgcaaaa
3000ttgatcagtg ccatgctgca gtcactaatc acaagaattg gcaatacaac tcccctttag
3060tcccgcgcaa cgctgaactc ggggaccgta aaggaaagat ccacatccca ttcccattgg
3120caaacgtgac ttgcagagtg ccaaaagcaa gaaaccctac agtaacttac ggaaaaaacc
3180aagtcaccat gctgctgtat cctgaccatc cgacactctt gtcttaccgt aacatgggac
3240aggaaccaaa ttaccacgag gagtgggtga cacacaagaa ggaggttacc ttgaccgtgc
3300ctactgaggg tctggaggtc acttggggca acaacgaacc atacaagtac tggccgcaga
3360tgtctacgaa cggtactgct catggtcacc cacatgagat aatcttgtac tattatgagc
3420tgtaccccac tatgactgta gtcattgtgt cggtggcctc gttcgtgctt ctgtcgatgg
3480tgggcacagc agtgggaatg tgtgtgtgcg cacggcgcag atgcattaca ccatatgaat
3540taacaccagg agccactgtt cccttcctgc tcagcctgct atgctgcgtc agaacgacca
3600aggcggccac atattacgag gctgcggcat atctatggaa cgaacagcag cccctgttct
3660ggttgcaggc tcttatcccg ctggccgcct tgatcgtcct gtgcaactgt ctgaaactct
3720tgccatgctg ctgtaagacc ctggcttttt tagccgtaat gagcatcggt gcccacactg
3780tgagcgcgta cgaacacgta acagtgatcc cgaacacggt gggagtaccg tataagactc
3840ttgtcaacag accgggttac agccccatgg tgttggagat ggagctacaa tcagtcacct
3900tggaaccaac actgtcactt gactacatca cgtgcgagta caaaactgtc atcccctccc
3960cgtacgtgaa gtgctgtggt acagcagagt gcaaggacaa gagcctacca gactacagct
4020gcaaggtctt tactggagtc tacccattta tgtggggcgg cgcctactgc ttttgcgacg
4080ccgaaaatac gcaattgagc gaggcacatg tagagaaatc tgaatcttgc aaaacagagt
4140ttgcatcggc ctacagagcc cacaccgcat cggcgtcggc gaagctccgc gtcctttacc
4200aaggaaacaa cattaccgta gctgcctacg ctaacggtga ccatgccgtc acagtaaagg
4260acgccaagtt tgtcgtgggc ccaatgtcct ccgcctggac accttttgac aacaaaatcg
4320tggtgtacaa aggcgacgtc tacaacatgg actacccacc ttttggcgca ggaagaccag
4380gacaatttgg tgacattcaa agtcgtacac cggaaagtaa agacgtttat gccaacactc
4440agttggtact acagaggcca gcagcaggca cggtacatgt accatactct caggcaccat
4500ctggcttcaa gtattggctg aaggaacgag gagcatcgct acagcacacg gcaccgttcg
4560gttgccagat tgcgacaaac ccggtaagag ctgtaaattg cgctgtgggg aacataccaa
4620tttccatcga cataccggat gcggccttta ctagggttgt cgatgcaccc tctgtaacgg
4680acatgtcatg cgaagtacca gcctgcactc actcctccga ctttgggggc gtcgccatca
4740tcaaatacac agctagcaag aaaggtaaat gtgcagtaca ttcgatgacc aacgccgtta
4800ccattcgaga agccgacgta gaagtagagg ggaactccca gctgcaaata tccttctcaa
4860cagccctggc aagcgccgag tttcgcgtgc aagtgtgctc cacacaagta cactgcgcag
4920ccgcatgcca ccctccaaag gaccacatag tcaattaccc agcatcacac accacccttg
4980gggtccagga tatatccaca acggcaatgt cttgggtgca gaagattacg ggaggagtag
5040gattaattgt tgctgttgct gccttaattt taattgtggt gctatgcgtg tcgtttagca
5100ggcactaagg atctagatct gctgtgcctt ctagttgcca gccatctgtt gtttgcccct
5160cccccgtgcc ttccttgacc ctggaaggtg ccactcccac tgtcctttcc taataaaatg
5220aggaaattgc atcgcattgt ctgagtaggt gtcattctat tctggggggt ggggtggggc
5280aggacagcaa gggggaggat tgggaagaca atagcaggca tgctggggat gcggtgggct
5340ctatggctcg agcatggtca tagctgtttc ctgtgtgaaa ttgttatccg ctcacaattc
5400cacacaacat acgagccgga agcataaagt gtaaagcctg gggtgcctaa tgagtgagct
5460aactcacatt aattgcgttg cgctcactgc ccgctttcca gtcgggaaac ctgtcgtgcc
5520agctgcatta atgaatcggc caacgcgcgg ggagaggcgg tttgcgtatt gggcgctctt
5580ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg gctgcggcga gcggtatcag
5640ctcactcaaa ggcggtaata cggttatcca cagaatcagg ggataacgca ggaaagaaca
5700tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa ggccgcgttg ctggcgtttt
5760tccataggct ccgcccccct gacgagcatc acaaaaatcg acgctcaagt cagaggtggc
5820gaaacccgac aggactataa agataccagg cgtttccccc tggaagctcc ctcgtgcgct
5880ctcctgttcc gaccctgccg cttaccggat acctgtccgc ctttctccct tcgggaagcg
5940tggcgctttc tcatagctca cgctgtaggt atctcagttc ggtgtaggtc gttcgctcca
6000agctgggctg tgtgcacgaa ccccccgttc agcccgaccg ctgcgcctta tccggtaact
6060atcgtcttga gtccaacccg gtaagacacg acttatcgcc actggcagca gccactggta
6120acaggattag cagagcgagg tatgtaggcg gtgctacaga gttcttgaag tggtggccta
6180actacggcta cactagaaga acagtatttg gtatctgcgc tctgctgaag ccagttacct
6240tcggaaaaag agttggtagc tcttgatccg gcaaacaaac caccgctggt agcggtggtt
6300tttttgtttg caagcagcag attacgcgca gaaaaaaagg atctcaagaa gatcctttga
6360tcttttctac ggggtctgac gctcagtgga acgaaaactc acgttaaggg attttggtca
6420tgagattatc aaaaaggatc ttcacctaga tccttttaaa ttaaaaatga agttttaaat
6480caatctaaag tatatatgag taaacttggt ctgacagtta gaaaaactca tcgagcatca
6540aatgaaactg caatttattc atatcaggat tatcaatacc atatttttga aaaagccgtt
6600tctgtaatga aggagaaaac tcaccgaggc agttccatag gatggcaaga tcctggtatc
6660ggtctgcgat tccgactcgt ccaacatcaa tacaacctat taatttcccc tcgtcaaaaa
6720taaggttatc aagtgagaaa tcaccatgag tgacgactga atccggtgag aatggcaaaa
6780gtttatgcat ttctttccag acttgttcaa caggccagcc attacgctcg tcatcaaaat
6840cactcgcatc aaccaaaccg ttattcattc gtgattgcgc ctgagcgaga cgaaatacgc
6900gatcgctgtt aaaaggacaa ttacaaacag gaatcgaatg caaccggcgc aggaacactg
6960ccagcgcatc aacaatattt tcacctgaat caggatattc ttctaatacc tggaatgctg
7020ttttcccagg gatcgcagtg gtgagtaacc atgcatcatc aggagtacgg ataaaatgct
7080tgatggtcgg aagaggcata aattccgtca gccagtttag tctgaccatc tcatctgtaa
7140catcattggc aacgctacct ttgccatgtt tcagaaacaa ctctggcgca tcgggcttcc
7200catacaatcg atagattgtc gcacctgatt gcccgacatt atcgcgagcc catttatacc
7260catataaatc agcatccatg ttggaattta atcgcggcct agagcaagac gtttcccgtt
7320gaatatggct catactcttc ctttttcaat attattgaag catttatcag ggttattgtc
7380tcatgagcgg atacatattt gaatgtattt agaaaaataa acaaataggg gttccgcgca
7440catttccccg aaaagtgcca cctgacgtct aagaaaccat tattatcatg acattaacct
7500ataaaaatag gcgtatcacg aggccctttc gtc
7533411353PRTArtificial SequenceSynthetic VLP78_15 (CHI VLP 532 NPNAx25)
sequence 41Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr
Gln Pro1 5 10 15Arg Pro
Trp Ala Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro 20
25 30Arg Pro Gln Arg Gln Ala Gly Gln Leu
Ala Gln Leu Ile Ser Ala Val 35 40
45Asn Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60Arg Lys Asn Lys Lys Gln Arg Gln Lys
Lys Gln Ala Pro Gln Asn Asp65 70 75
80Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln
Lys Lys 85 90 95Lys Lys
Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp 100
105 110Cys Ile Phe Glu Val Lys His Glu Gly
Lys Val Met Gly Tyr Ala Cys 115 120
125Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile
130 135 140Asp Asn Ala Asp Leu Ala Lys
Leu Ala Phe Lys Arg Ser Ser Lys Tyr145 150
155 160Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys
Ser Asp Ala Ser 165 170
175Lys Phe Thr His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly
180 185 190Ala Val Gln Tyr Ser Gly
Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly 195 200
205Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly
Arg Val 210 215 220Val Ala Ile Val Leu
Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu225 230
235 240Ser Val Val Thr Trp Asn Lys Asp Ile Val
Thr Lys Ile Thr Pro Glu 245 250
255Gly Ala Glu Glu Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala
260 265 270Asn Thr Thr Phe Pro
Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys Tyr 275
280 285Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu
Asp Asn Val Met 290 295 300Arg Pro Gly
Tyr Tyr Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro305
310 315 320His Arg Gln Arg Arg Ser Thr
Lys Asp Asn Phe Asn Val Tyr Lys Ala 325
330 335Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly
Glu Gly His Ser 340 345 350Cys
His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365Gly Thr Leu Lys Ile Gln Val Ser Leu
Gln Ile Gly Ile Lys Thr Asp 370 375
380Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro385
390 395 400Ala Asp Ala Glu
Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys 405
410 415Thr Ile Thr Gly Thr Met Gly His Phe Ile
Leu Ala Arg Cys Pro Lys 420 425
430Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys Ile Ser His
435 440 445Thr Cys Thr His Pro Phe His
His Glu Pro Pro Val Ile Gly Arg Glu 450 455
460Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser
Thr465 470 475 480Tyr Val
Gln Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met
485 490 495Pro Pro Asp Thr Pro Asp Arg
Thr Leu Met Thr Gln Gln Ser Gly Asn 500 505
510Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys
Asn Cys 515 520 525Gly Gly Ser Gly
Gly Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Val Asp Pro Asn545 550 555
560Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
565 570 575Ala Asn Pro Asn Ala
Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 580
585 590Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 595 600 605Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 610
615 620Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly
Ser Asn Glu Gly Leu625 630 635
640Thr Thr Thr Asp Lys Val Ile Asn Asn Cys Lys Ile Asp Gln Cys His
645 650 655Ala Ala Val Thr
Asn His Lys Asn Trp Gln Tyr Asn Ser Pro Leu Val 660
665 670Pro Arg Asn Ala Glu Leu Gly Asp Arg Lys Gly
Lys Ile His Ile Pro 675 680 685Phe
Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys Ala Arg Asn Pro 690
695 700Thr Val Thr Tyr Gly Lys Asn Gln Val Thr
Met Leu Leu Tyr Pro Asp705 710 715
720His Pro Thr Leu Leu Ser Tyr Arg Asn Met Gly Gln Glu Pro Asn
Tyr 725 730 735His Glu Glu
Trp Val Thr His Lys Lys Glu Val Thr Leu Thr Val Pro 740
745 750Thr Glu Gly Leu Glu Val Thr Trp Gly Asn
Asn Glu Pro Tyr Lys Tyr 755 760
765Trp Pro Gln Met Ser Thr Asn Gly Thr Ala His Gly His Pro His Glu 770
775 780Ile Ile Leu Tyr Tyr Tyr Glu Leu
Tyr Pro Thr Met Thr Val Val Ile785 790
795 800Val Ser Val Ala Ser Phe Val Leu Leu Ser Met Val
Gly Thr Ala Val 805 810
815Gly Met Cys Val Cys Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu
820 825 830Thr Pro Gly Ala Thr Val
Pro Phe Leu Leu Ser Leu Leu Cys Cys Val 835 840
845Arg Thr Thr Lys Ala Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr
Leu Trp 850 855 860Asn Glu Gln Gln Pro
Leu Phe Trp Leu Gln Ala Leu Ile Pro Leu Ala865 870
875 880Ala Leu Ile Val Leu Cys Asn Cys Leu Lys
Leu Leu Pro Cys Cys Cys 885 890
895Lys Thr Leu Ala Phe Leu Ala Val Met Ser Ile Gly Ala His Thr Val
900 905 910Ser Ala Tyr Glu His
Val Thr Val Ile Pro Asn Thr Val Gly Val Pro 915
920 925Tyr Lys Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro
Met Val Leu Glu 930 935 940Met Glu Leu
Gln Ser Val Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr945
950 955 960Ile Thr Cys Glu Tyr Lys Thr
Val Ile Pro Ser Pro Tyr Val Lys Cys 965
970 975Cys Gly Thr Ala Glu Cys Lys Asp Lys Ser Leu Pro
Asp Tyr Ser Cys 980 985 990Lys
Val Phe Thr Gly Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys 995
1000 1005Phe Cys Asp Ala Glu Asn Thr Gln
Leu Ser Glu Ala His Val Glu 1010 1015
1020Lys Ser Glu Ser Cys Lys Thr Glu Phe Ala Ser Ala Tyr Arg Ala
1025 1030 1035His Thr Ala Ser Ala Ser
Ala Lys Leu Arg Val Leu Tyr Gln Gly 1040 1045
1050Asn Asn Ile Thr Val Ala Ala Tyr Ala Asn Gly Asp His Ala
Val 1055 1060 1065Thr Val Lys Asp Ala
Lys Phe Val Val Gly Pro Met Ser Ser Ala 1070 1075
1080Trp Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys Gly
Asp Val 1085 1090 1095Tyr Asn Met Asp
Tyr Pro Pro Phe Gly Ala Gly Arg Pro Gly Gln 1100
1105 1110Phe Gly Asp Ile Gln Ser Arg Thr Pro Glu Ser
Lys Asp Val Tyr 1115 1120 1125Ala Asn
Thr Gln Leu Val Leu Gln Arg Pro Ala Ala Gly Thr Val 1130
1135 1140His Val Pro Tyr Ser Gln Ala Pro Ser Gly
Phe Lys Tyr Trp Leu 1145 1150 1155Lys
Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe Gly Cys 1160
1165 1170Gln Ile Ala Thr Asn Pro Val Arg Ala
Val Asn Cys Ala Val Gly 1175 1180
1185Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala Ala Phe Thr Arg
1190 1195 1200Val Val Asp Ala Pro Ser
Val Thr Asp Met Ser Cys Glu Val Pro 1205 1210
1215Ala Cys Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile
Lys 1220 1225 1230Tyr Thr Ala Ser Lys
Lys Gly Lys Cys Ala Val His Ser Met Thr 1235 1240
1245Asn Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu
Gly Asn 1250 1255 1260Ser Gln Leu Gln
Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu 1265
1270 1275Phe Arg Val Gln Val Cys Ser Thr Gln Val His
Cys Ala Ala Ala 1280 1285 1290Cys His
Pro Pro Lys Asp His Ile Val Asn Tyr Pro Ala Ser His 1295
1300 1305Thr Thr Leu Gly Val Gln Asp Ile Ser Thr
Thr Ala Met Ser Trp 1310 1315 1320Val
Gln Lys Ile Thr Gly Gly Val Gly Leu Ile Val Ala Val Ala 1325
1330 1335Ala Leu Ile Leu Ile Val Val Leu Cys
Val Ser Phe Ser Arg His 1340 1345
1350427329DNAArtificial SequenceSynthetic VLP74_25 (VEEV VLP 519 NPNAx6)
sequence 42tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg
gagacggtca 60cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg
tcagcgggtg 120ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta
ctgagagtgc 180accatatgcg gtgtgaaata ccgcacagat gcgtaaggag aaaataccgc
atcaggcgcc 240attcgccatt caggctgcgc aactgttggg aagggcgatc ggtgcgggcc
tcttcgctat 300tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt aagttgggta
acgccagggt 360tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt gacgcgtgtt
ggcattgatt 420attgactagt tattaatagt aatcaattac ggggtcatta gttcatagcc
catatatgga 480gttccgcgtt acataactta cggtaaatgg cccgcctggc tgaccgccca
acgacccccg 540cccattgacg tcaataatga cgtatgttcc catagtaacg ccaataggga
ctttccattg 600acgtcaatgg gtggagtatt tacggtaaac tgcccacttg gcagtacatc
aagtgtatca 660tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa tggcccgcct
ggcattatgc 720ccagtacatg accttatggg actttcctac ttggcagtac atctacgtat
tagtcatcgc 780tattaccatg gtgatgcggt tttggcagta catcaatggg cgtggatagc
ggtttgactc 840acggggattt ccaagtctcc accccattga cgtcaatggg agtttgtttt
ggcaccaaaa 900tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca ttgacgcaaa
tgggcggtag 960gcgtgtacgg tgggaggtct atataagcag agctcgttta gtgaaccgtc
agataactgc 1020aggtcgacga tatcgcggcc gccaccatgt tcccgttcca gccaatgtat
ccgatgcagc 1080caatgcccta tcgcaacccg ttcgcggccc cgcgcaggcc ctggttcccc
agaaccgacc 1140cttttctggc gatgcaggtg caggaattaa cccgctcgat ggctaacctg
acgttcaagc 1200aacgccggga cgcgccacct gaggggccat ccgctaataa accgaagaag
gaggcctcgc 1260aaaaacagaa agggggaggc caagggaaga agaagaagaa ccaagggaag
aagaaggcta 1320agacagggcc gcctaatccg aaggcacaga atggaaacaa gaagaagacc
aacaagaaac 1380caggcaagag acagcgcatg gtcatgaaat tggaatctga caagacgttc
ccaatcatgt 1440tggaagggaa gataaacggc tacgcttgtg tggtcggagg gaagttattc
aggccgatgc 1500atgtggaagg caagatcgac aacgacgttc tggccgcgct taagacgaag
aaagcatcca 1560aatacgatct tgagtatgca gatgtgccac agaacatgcg ggccgataca
ttcaaataca 1620cccatgagaa accccaaggc tattacagct ggcatcatgg agcagtccaa
tatgaaaatg 1680ggcgtttcac ggtgccgaaa ggagttgggg ccaagggaga cagcggacga
cccattctgg 1740ataaccaggg acgggtggtc gctattgtgc tgggaggtgt gaatgaagga
tctaggacag 1800ccctttcagt cgtcatgtgg aacgagaagg gagttaccgt gaagtatact
ccagagaact 1860gcgagcaatg gtcactagtg accaccatgt gtctgctcgc caatgtgacg
ttcccatgtg 1920ctcaaccacc aatttgctac gacagaaaac cagcagagac tttggccatg
ctcagcgtta 1980acgttgacaa cccgggctac gatgagctgc tggaagcagc tgttaagtgc
cccggaagga 2040aaaggagatc caccgaggag ctgtttaatg agtataagct aacgcgccct
tacatggcca 2100gatgcatcag atgtgcagtt gggagctgcc atagtccaat agcaatcgag
gcagtaaaga 2160gcgacgggca cgacggttat gttagacttc agacttcctc gcagtatggc
ctggattcct 2220ccggcaactt aaagggcagg accatgcggt atgacatgca cgggaccatt
aaagagatac 2280cactacatca agtgtcactc tatacatctc gcccgtgtca cattgtggat
gggcacggtt 2340atttcctgct tgccaggtgc ccggcagggg actccatcac catggaattt
aagaaagatt 2400ccgtcagaca ctcctgctcg gtgccgtatg aagtgaaatt taatcctgta
ggcagagaac 2460tctatactca tcccccagaa cacggagtag agcaagcgtg ccaagtctac
gcacatgatg 2520cacagaacag aggagcttat gtcgagatgc acctcccggg ctcagaagtg
gacagcagtt 2580tggtttcctt gagcggcagt tccggaggaa acccgaatgc caatcccaac
gcgaacccca 2640atgctaaccc aaatgccaac ccaaacgcca accccaacgc tggtggatcc
tcagtcaccg 2700tgacacctcc tgatgggact agcgccctgg tggaatgcga gtgtggcggc
acaaagatct 2760ccgagaccat caacaagaca aaacagttca gccagtgcac aaagaaggag
cagtgcagag 2820catatcggct gcagaacgat aagtgggtgt ataattctga caaactgccc
aaagcagcgg 2880gagccacctt aaaaggaaaa ctgcatgtcc cattcttgct ggcagacggc
aaatgcaccg 2940tgcctctagc accagaacct atgataacct tcggtttcag atcagtgtca
ctgaaactgc 3000accctaagaa tcccacatat ctaatcaccc gccaacttgc tgatgagcct
cactacacgc 3060acgagctcat atctgaacca gctgttagga attttaccgt caccgaaaaa
gggtgggagt 3120ttgtatgggg aaaccacccg ccgaaaaggt tttgggcaca ggaaacagca
cccggaaatc 3180cacatgggct accgcacgag gtgataactc attattacca cagataccct
atgtccacca 3240tcctgggttt gtcaatttgt gccgccattg caaccgtttc cgttgcagcg
tctacctggc 3300tgttttgcag atcaagagtt gcgtgcctaa ctccttaccg gctaacacct
aacgctagga 3360taccattttg tctggctgtg ctttgctgcg cccgcactgc ccgggccgag
accacctggg 3420agtccttgga tcacctatgg aacaataacc aacagatgtt ctggattcaa
ttgctgatcc 3480ctctggccgc cttgatcgta gtgactcgcc tgctcaggtg cgtgtgctgt
gtcgtgcctt 3540ttttagtcat ggccggcgcc gcaggcgccg gcgcctacga gcacgcgacc
acgatgccga 3600gccaagcggg aatctcgtat aacactatag tcaacagagc aggctacgca
ccactcccta 3660tcagcataac accaacaaag atcaagctga tacctacagt gaacttggag
tacgtcacct 3720gccactacaa aacaggaatg gattcaccag ccatcaaatg ctgcggatct
caggaatgca 3780ctccaactta caggcctgat gaacagtgca aagtcttcac aggggtttac
ccgttcatgt 3840ggggtggtgc atattgcttt tgcgacactg agaacaccca agtcagcaag
gcctacgtaa 3900tgaaatctga cgactgcctt gcggatcatg ctgaagcata taaagcgcac
acagcctcag 3960tgcaggcgtt cctcaacatc acagtgggag aacactctat tgtgactacc
gtgtatgtga 4020atggagaaac tcctgtgaat ttcaatgggg tcaaaataac tgcaggtccg
ctttccacag 4080cttggacacc ctttgatcgc aaaatcgtgc agtatgccgg ggagatatat
aattatgatt 4140ttcctgagta tggggcagga caaccaggag catttggaga tatacaatcc
agaacagtct 4200caagctctga tctgtatgcc aataccaacc tagtgctgca gagacccaaa
gcaggagcga 4260tccacgtgcc atacactcag gcaccttcgg gttttgagca atggaagaaa
gataaagctc 4320catcattgaa atttaccgcc cctttcggat gcgaaatata tacaaacccc
attcgcgccg 4380aaaactgtgc tgtagggtca attccattag cctttgacat tcccgacgcc
ttgttcacca 4440gggtgtcaga aacaccgaca ctttcagcgg ccgaatgcac tcttaacgag
tgcgtgtatt 4500cttccgactt tggtgggatc gccacggtca agtactcggc cagcaagtca
ggcaagtgcg 4560cagtccatgt gccatcaggg actgctaccc taaaagaagc agcagtcgag
ctaaccgagc 4620aagggtcggc gactatccat ttctcgaccg caaatatcca cccggagttc
aggctccaaa 4680tatgcacatc atatgttacg tgcaaaggtg attgtcaccc cccgaaagac
catattgtga 4740cacaccctca gtatcacgcc caaacattta cagccgcggt gtcaaaaacc
gcgtggacgt 4800ggttaacatc cctgctggga ggatcagccg taattattat aattggcttg
gtgctggcta 4860ctattgtggc catgtacgtg ctgaccaacc agaaacataa ttaaggatct
agatctgctg 4920tgccttctag ttgccagcca tctgttgttt gcccctcccc cgtgccttcc
ttgaccctgg 4980aaggtgccac tcccactgtc ctttcctaat aaaatgagga aattgcatcg
cattgtctga 5040gtaggtgtca ttctattctg gggggtgggg tggggcagga cagcaagggg
gaggattggg 5100aagacaatag caggcatgct ggggatgcgg tgggctctat ggctcgagca
tggtcatagc 5160tgtttcctgt gtgaaattgt tatccgctca caattccaca caacatacga
gccggaagca 5220taaagtgtaa agcctggggt gcctaatgag tgagctaact cacattaatt
gcgttgcgct 5280cactgcccgc tttccagtcg ggaaacctgt cgtgccagct gcattaatga
atcggccaac 5340gcgcggggag aggcggtttg cgtattgggc gctcttccgc ttcctcgctc
actgactcgc 5400tgcgctcggt cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg
gtaatacggt 5460tatccacaga atcaggggat aacgcaggaa agaacatgtg agcaaaaggc
cagcaaaagg 5520ccaggaaccg taaaaaggcc gcgttgctgg cgtttttcca taggctccgc
ccccctgacg 5580agcatcacaa aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga
ctataaagat 5640accaggcgtt tccccctgga agctccctcg tgcgctctcc tgttccgacc
ctgccgctta 5700ccggatacct gtccgccttt ctcccttcgg gaagcgtggc gctttctcat
agctcacgct 5760gtaggtatct cagttcggtg taggtcgttc gctccaagct gggctgtgtg
cacgaacccc 5820ccgttcagcc cgaccgctgc gccttatccg gtaactatcg tcttgagtcc
aacccggtaa 5880gacacgactt atcgccactg gcagcagcca ctggtaacag gattagcaga
gcgaggtatg 5940taggcggtgc tacagagttc ttgaagtggt ggcctaacta cggctacact
agaagaacag 6000tatttggtat ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt
ggtagctctt 6060gatccggcaa acaaaccacc gctggtagcg gtggtttttt tgtttgcaag
cagcagatta 6120cgcgcagaaa aaaaggatct caagaagatc ctttgatctt ttctacgggg
tctgacgctc 6180agtggaacga aaactcacgt taagggattt tggtcatgag attatcaaaa
aggatcttca 6240cctagatcct tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata
tatgagtaaa 6300cttggtctga cagttagaaa aactcatcga gcatcaaatg aaactgcaat
ttattcatat 6360caggattatc aataccatat ttttgaaaaa gccgtttctg taatgaagga
gaaaactcac 6420cgaggcagtt ccataggatg gcaagatcct ggtatcggtc tgcgattccg
actcgtccaa 6480catcaataca acctattaat ttcccctcgt caaaaataag gttatcaagt
gagaaatcac 6540catgagtgac gactgaatcc ggtgagaatg gcaaaagttt atgcatttct
ttccagactt 6600gttcaacagg ccagccatta cgctcgtcat caaaatcact cgcatcaacc
aaaccgttat 6660tcattcgtga ttgcgcctga gcgagacgaa atacgcgatc gctgttaaaa
ggacaattac 6720aaacaggaat cgaatgcaac cggcgcagga acactgccag cgcatcaaca
atattttcac 6780ctgaatcagg atattcttct aatacctgga atgctgtttt cccagggatc
gcagtggtga 6840gtaaccatgc atcatcagga gtacggataa aatgcttgat ggtcggaaga
ggcataaatt 6900ccgtcagcca gtttagtctg accatctcat ctgtaacatc attggcaacg
ctacctttgc 6960catgtttcag aaacaactct ggcgcatcgg gcttcccata caatcgatag
attgtcgcac 7020ctgattgccc gacattatcg cgagcccatt tatacccata taaatcagca
tccatgttgg 7080aatttaatcg cggcctagag caagacgttt cccgttgaat atggctcata
ctcttccttt 7140ttcaatatta ttgaagcatt tatcagggtt attgtctcat gagcggatac
atatttgaat 7200gtatttagaa aaataaacaa ataggggttc cgcgcacatt tccccgaaaa
gtgccacctg 7260acgtctaaga aaccattatt atcatgacat taacctataa aaataggcgt
atcacgaggc 7320cctttcgtc
7329431285PRTArtificial SequenceSynthetic VLP74_25 (VEEV VLP
519 NPNAx6) sequence 43Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln
Pro Met Pro Tyr Arg1 5 10
15Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro
20 25 30Phe Leu Ala Met Gln Val Gln
Glu Leu Thr Arg Ser Met Ala Asn Leu 35 40
45Thr Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala
Asn 50 55 60Lys Pro Lys Lys Glu Ala
Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly65 70
75 80Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala
Lys Thr Gly Pro Pro 85 90
95Asn Pro Lys Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro
100 105 110Gly Lys Arg Gln Arg Met
Val Met Lys Leu Glu Ser Asp Lys Thr Phe 115 120
125Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val
Val Gly 130 135 140Gly Lys Leu Phe Arg
Pro Met His Val Glu Gly Lys Ile Asp Asn Asp145 150
155 160Val Leu Ala Ala Leu Lys Thr Lys Lys Ala
Ser Lys Tyr Asp Leu Glu 165 170
175Tyr Ala Asp Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr
180 185 190His Glu Lys Pro Gln
Gly Tyr Tyr Ser Trp His His Gly Ala Val Gln 195
200 205Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val
Gly Ala Lys Gly 210 215 220Asp Ser Gly
Arg Pro Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile225
230 235 240Val Leu Gly Gly Val Asn Glu
Gly Ser Arg Thr Ala Leu Ser Val Val 245
250 255Met Trp Asn Glu Lys Gly Val Thr Val Lys Tyr Thr
Pro Glu Asn Cys 260 265 270Glu
Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala Asn Val Thr 275
280 285Phe Pro Cys Ala Gln Pro Pro Ile Cys
Tyr Asp Arg Lys Pro Ala Glu 290 295
300Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn Pro Gly Tyr Asp Glu305
310 315 320Leu Leu Glu Ala
Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr 325
330 335Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr
Arg Pro Tyr Met Ala Arg 340 345
350Cys Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile Ala Ile Glu
355 360 365Ala Val Lys Ser Asp Gly His
Asp Gly Tyr Val Arg Leu Gln Thr Ser 370 375
380Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr
Met385 390 395 400Arg Tyr
Asp Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val
405 410 415Ser Leu Tyr Thr Ser Arg Pro
Cys His Ile Val Asp Gly His Gly Tyr 420 425
430Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr Met
Glu Phe 435 440 445Lys Lys Asp Ser
Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His Pro
Pro Glu His Gly465 470 475
480Val Glu Gln Ala Cys Gln Val Tyr Ala His Asp Ala Gln Asn Arg Gly
485 490 495Ala Tyr Val Glu Met
His Leu Pro Gly Ser Glu Val Asp Ser Ser Leu 500
505 510Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn
Ala Asn Pro Asn 515 520 525Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540Ala Gly Gly Ser Ser Val Thr Val Thr Pro Pro
Asp Gly Thr Ser Ala545 550 555
560Leu Val Glu Cys Glu Cys Gly Gly Thr Lys Ile Ser Glu Thr Ile Asn
565 570 575Lys Thr Lys Gln
Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys Arg Ala 580
585 590Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr Asn
Ser Asp Lys Leu Pro 595 600 605Lys
Ala Ala Gly Ala Thr Leu Lys Gly Lys Leu His Val Pro Phe Leu 610
615 620Leu Ala Asp Gly Lys Cys Thr Val Pro Leu
Ala Pro Glu Pro Met Ile625 630 635
640Thr Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys Asn
Pro 645 650 655Thr Tyr Leu
Ile Thr Arg Gln Leu Ala Asp Glu Pro His Tyr Thr His 660
665 670Glu Leu Ile Ser Glu Pro Ala Val Arg Asn
Phe Thr Val Thr Glu Lys 675 680
685Gly Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys Arg Phe Trp Ala 690
695 700Gln Glu Thr Ala Pro Gly Asn Pro
His Gly Leu Pro His Glu Val Ile705 710
715 720Thr His Tyr Tyr His Arg Tyr Pro Met Ser Thr Ile
Leu Gly Leu Ser 725 730
735Ile Cys Ala Ala Ile Ala Thr Val Ser Val Ala Ala Ser Thr Trp Leu
740 745 750Phe Cys Arg Ser Arg Val
Ala Cys Leu Thr Pro Tyr Arg Leu Thr Pro 755 760
765Asn Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala
Arg Thr 770 775 780Ala Arg Ala Glu Thr
Thr Trp Glu Ser Leu Asp His Leu Trp Asn Asn785 790
795 800Asn Gln Gln Met Phe Trp Ile Gln Leu Leu
Ile Pro Leu Ala Ala Leu 805 810
815Ile Val Val Thr Arg Leu Leu Arg Cys Val Cys Cys Val Val Pro Phe
820 825 830Leu Val Met Ala Gly
Ala Ala Gly Ala Gly Ala Tyr Glu His Ala Thr 835
840 845Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr Asn Thr
Ile Val Asn Arg 850 855 860Ala Gly Tyr
Ala Pro Leu Pro Ile Ser Ile Thr Pro Thr Lys Ile Lys865
870 875 880Leu Ile Pro Thr Val Asn Leu
Glu Tyr Val Thr Cys His Tyr Lys Thr 885
890 895Gly Met Asp Ser Pro Ala Ile Lys Cys Cys Gly Ser
Gln Glu Cys Thr 900 905 910Pro
Thr Tyr Arg Pro Asp Glu Gln Cys Lys Val Phe Thr Gly Val Tyr 915
920 925Pro Phe Met Trp Gly Gly Ala Tyr Cys
Phe Cys Asp Thr Glu Asn Thr 930 935
940Gln Val Ser Lys Ala Tyr Val Met Lys Ser Asp Asp Cys Leu Ala Asp945
950 955 960His Ala Glu Ala
Tyr Lys Ala His Thr Ala Ser Val Gln Ala Phe Leu 965
970 975Asn Ile Thr Val Gly Glu His Ser Ile Val
Thr Thr Val Tyr Val Asn 980 985
990Gly Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr Ala Gly Pro
995 1000 1005Leu Ser Thr Ala Trp Thr
Pro Phe Asp Arg Lys Ile Val Gln Tyr 1010 1015
1020Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr Gly Ala
Gly 1025 1030 1035Gln Pro Gly Ala Phe
Gly Asp Ile Gln Ser Arg Thr Val Ser Ser 1040 1045
1050Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg
Pro Lys 1055 1060 1065Ala Gly Ala Ile
His Val Pro Tyr Thr Gln Ala Pro Ser Gly Phe 1070
1075 1080Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu
Lys Phe Thr Ala 1085 1090 1095Pro Phe
Gly Cys Glu Ile Tyr Thr Asn Pro Ile Arg Ala Glu Asn 1100
1105 1110Cys Ala Val Gly Ser Ile Pro Leu Ala Phe
Asp Ile Pro Asp Ala 1115 1120 1125Leu
Phe Thr Arg Val Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu 1130
1135 1140Cys Thr Leu Asn Glu Cys Val Tyr Ser
Ser Asp Phe Gly Gly Ile 1145 1150
1155Ala Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly Lys Cys Ala Val
1160 1165 1170His Val Pro Ser Gly Thr
Ala Thr Leu Lys Glu Ala Ala Val Glu 1175 1180
1185Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe Ser Thr Ala
Asn 1190 1195 1200Ile His Pro Glu Phe
Arg Leu Gln Ile Cys Thr Ser Tyr Val Thr 1205 1210
1215Cys Lys Gly Asp Cys His Pro Pro Lys Asp His Ile Val
Thr His 1220 1225 1230Pro Gln Tyr His
Ala Gln Thr Phe Thr Ala Ala Val Ser Lys Thr 1235
1240 1245Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly
Ser Ala Val Ile 1250 1255 1260Ile Ile
Ile Gly Leu Val Leu Ala Thr Ile Val Ala Met Tyr Val 1265
1270 1275Leu Thr Asn Gln Lys His Asn 1280
12854420PRTPlasmodium falciparum 44Glu Tyr Leu Asn Lys Ile Gln
Asn Ser Leu Ser Thr Glu Trp Ser Pro1 5 10
15Cys Ser Val Thr 204520PRTPlasmodium yoelii
45Tyr Asn Arg Asn Ile Val Asn Arg Leu Leu Gly Asp Ala Leu Asn Gly1
5 10 15Pro Glu Glu Lys
204630PRTArtificial SequenceSynthetic VLP74 insert 46Ser Gly Gly Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn1 5
10 15Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Gly Gly Ser 20 25
304790DNAArtificial SequenceSynthetic VLP74 insert 47tccggaggaa
acccgaatgc caatcccaac gcgaacccca atgctaaccc aaatgccaac 60ccaaacgcca
accccaacgc tggtggatcc
9048106PRTArtificial SequenceSynthetic VLP78 insert 48Ser Gly Gly Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn1 5
10 15Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Val
Asp Pro Asn Ala Asn 20 25
30Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn
35 40 45Pro Asn Ala Asn Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn 50 55
60Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn65
70 75 80Pro Asn Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 85
90 95Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser
100 10549318DNAArtificial SequenceSynthetic VLP74
insert 49tccggaggaa acccgaatgc caatcccaac gcgaacccca acgctaaccc
caacgccaat 60ccgaatgcaa acccgaacgt tgacccaaac gccaacccga atgccaatcc
caacgcgaac 120cccaatgcta acccaaatgc caacccaaac gccaacccca acgctaatcc
aaacgccaac 180cctaacgcca atcccaacgc gaatcctaac gctaatccca acgcaaatcc
caatgctaat 240ccgaacgcga accctaatgc aaaccccaac gccaacccga acgctaaccc
gaacgctaat 300cccaacgccg gtggatcc
31850452PRTArtificial SequenceSynthetic CHIKV E2-74 fusion
protein 50Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala Thr Arg Pro Tyr
Leu1 5 10 15Ala His Cys
Pro Asp Cys Gly Glu Gly His Ser Cys His Ser Pro Ile 20
25 30Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr
Asp Gly Thr Leu Lys Ile 35 40
45Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp Asp Ser His Asp Trp 50
55 60Thr Lys Leu Arg Tyr Met Asp Ser His
Thr Pro Ala Asp Ala Glu Arg65 70 75
80Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys Thr Ile Thr
Gly Thr 85 90 95Met Gly
His Phe Ile Leu Ala Arg Cys Pro Lys Gly Glu Thr Leu Thr 100
105 110Val Gly Phe Thr Asp Ser Arg Lys Ile
Ser His Thr Cys Thr His Pro 115 120
125Phe His His Glu Pro Pro Val Ile Gly Arg Glu Arg Phe His Ser Arg
130 135 140Pro Gln His Gly Lys Glu Leu
Pro Cys Ser Thr Tyr Val Gln Ser Thr145 150
155 160Ala Ala Thr Ala Glu Glu Ile Glu Val His Met Pro
Pro Asp Thr Pro 165 170
175Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn Val Lys Ile Thr Val
180 185 190Asn Gly Gln Thr Val Arg
Tyr Lys Cys Asn Cys Gly Gly Ser Gly Gly 195 200
205Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro
Asn Ala 210 215 220Asn Pro Asn Ala Asn
Pro Asn Ala Gly Gly Ser Asn Glu Gly Leu Thr225 230
235 240Thr Thr Asp Lys Val Ile Asn Asn Cys Lys
Ile Asp Gln Cys His Ala 245 250
255Ala Val Thr Asn His Lys Asn Trp Gln Tyr Asn Ser Pro Leu Val Pro
260 265 270Arg Asn Ala Glu Leu
Gly Asp Arg Lys Gly Lys Ile His Ile Pro Phe 275
280 285Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys Ala
Arg Asn Pro Thr 290 295 300Val Thr Tyr
Gly Lys Asn Gln Val Thr Met Leu Leu Tyr Pro Asp His305
310 315 320Pro Thr Leu Leu Ser Tyr Arg
Asn Met Gly Gln Glu Pro Asn Tyr His 325
330 335Glu Glu Trp Val Thr His Lys Lys Glu Val Thr Leu
Thr Val Pro Thr 340 345 350Glu
Gly Leu Glu Val Thr Trp Gly Asn Asn Glu Pro Tyr Lys Tyr Trp 355
360 365Pro Gln Met Ser Thr Asn Gly Thr Ala
His Gly His Pro His Glu Ile 370 375
380Ile Leu Tyr Tyr Tyr Glu Leu Tyr Pro Thr Met Thr Val Val Ile Val385
390 395 400Ser Val Ala Ser
Phe Val Leu Leu Ser Met Val Gly Thr Ala Val Gly 405
410 415Met Cys Val Cys Ala Arg Arg Arg Cys Ile
Thr Pro Tyr Glu Leu Thr 420 425
430Pro Gly Ala Thr Val Pro Phe Leu Leu Ser Leu Leu Cys Cys Val Arg
435 440 445Thr Thr Lys Ala
45051439PRTArtificial SequenceSynthetic CHIKV E1 51Tyr Glu His Val Thr
Val Ile Pro Asn Thr Val Gly Val Pro Tyr Lys1 5
10 15Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro Met
Val Leu Glu Met Glu 20 25
30Leu Gln Ser Val Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr
35 40 45Cys Glu Tyr Lys Thr Val Ile Pro
Ser Pro Tyr Val Lys Cys Cys Gly 50 55
60Thr Ala Glu Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser Cys Lys Val65
70 75 80Phe Thr Gly Val Tyr
Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys 85
90 95Asp Ala Glu Asn Thr Gln Leu Ser Glu Ala His
Val Glu Lys Ser Glu 100 105
110Ser Cys Lys Thr Glu Phe Ala Ser Ala Tyr Arg Ala His Thr Ala Ser
115 120 125Ala Ser Ala Lys Leu Arg Val
Leu Tyr Gln Gly Asn Asn Ile Thr Val 130 135
140Ala Ala Tyr Ala Asn Gly Asp His Ala Val Thr Val Lys Asp Ala
Lys145 150 155 160Phe Val
Val Gly Pro Met Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys
165 170 175Ile Val Val Tyr Lys Gly Asp
Val Tyr Asn Met Asp Tyr Pro Pro Phe 180 185
190Gly Ala Gly Arg Pro Gly Gln Phe Gly Asp Ile Gln Ser Arg
Thr Pro 195 200 205Glu Ser Lys Asp
Val Tyr Ala Asn Thr Gln Leu Val Leu Gln Arg Pro 210
215 220Ala Ala Gly Thr Val His Val Pro Tyr Ser Gln Ala
Pro Ser Gly Phe225 230 235
240Lys Tyr Trp Leu Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro
245 250 255Phe Gly Cys Gln Ile
Ala Thr Asn Pro Val Arg Ala Val Asn Cys Ala 260
265 270Val Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp
Ala Ala Phe Thr 275 280 285Arg Val
Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu Val Pro 290
295 300Ala Cys Thr His Ser Ser Asp Phe Gly Gly Val
Ala Ile Ile Lys Tyr305 310 315
320Thr Ala Ser Lys Lys Gly Lys Cys Ala Val His Ser Met Thr Asn Ala
325 330 335Val Thr Ile Arg
Glu Ala Asp Val Glu Val Glu Gly Asn Ser Gln Leu 340
345 350Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala
Glu Phe Arg Val Gln 355 360 365Val
Cys Ser Thr Gln Val His Cys Ala Ala Ala Cys His Pro Pro Lys 370
375 380Asp His Ile Val Asn Tyr Pro Ala Ser His
Thr Thr Leu Gly Val Gln385 390 395
400Asp Ile Ser Thr Thr Ala Met Ser Trp Val Gln Lys Ile Thr Gly
Gly 405 410 415Val Gly Leu
Ile Val Ala Val Ala Ala Leu Ile Leu Ile Val Val Leu 420
425 430Cys Val Ser Phe Ser Arg His
43552261PRTArtificial SequenceSynthetic CHIKV capsid 52Met Glu Phe Ile
Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro1 5
10 15Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln
Val Ile Arg Pro Arg Pro 20 25
30Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val
35 40 45Asn Lys Leu Thr Met Arg Ala Val
Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp65
70 75 80Pro Lys Gln Lys Lys
Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys 85
90 95Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met
Lys Ile Glu Asn Asp 100 105
110Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys
115 120 125Leu Val Gly Asp Lys Val Met
Lys Pro Ala His Val Lys Gly Thr Ile 130 135
140Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys
Tyr145 150 155 160Asp Leu
Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175Lys Phe Thr His Glu Lys Pro
Glu Gly Tyr Tyr Asn Trp His His Gly 180 185
190Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly
Ala Gly 195 200 205Lys Pro Gly Asp
Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala
Arg Thr Ala Leu225 230 235
240Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255Gly Ala Glu Glu Trp
26053453PRTArtificial SequenceSynthetic VEEV E2-74 fusion
protein 53Ser Thr Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr
Met1 5 10 15Ala Arg Cys
Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile Ala 20
25 30Ile Glu Ala Val Lys Ser Asp Gly His Asp
Gly Tyr Val Arg Leu Gln 35 40
45Thr Ser Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg 50
55 60Thr Met Arg Tyr Asp Met His Gly Thr
Ile Lys Glu Ile Pro Leu His65 70 75
80Gln Val Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp
Gly His 85 90 95Gly Tyr
Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr Met 100
105 110Glu Phe Lys Lys Asp Ser Val Arg His
Ser Cys Ser Val Pro Tyr Glu 115 120
125Val Lys Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu
130 135 140His Gly Val Glu Gln Ala Cys
Gln Val Tyr Ala His Asp Ala Gln Asn145 150
155 160Arg Gly Ala Tyr Val Glu Met His Leu Pro Gly Ser
Glu Val Asp Ser 165 170
175Ser Leu Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn Ala Asn
180 185 190Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 195 200
205Pro Asn Ala Gly Gly Ser Ser Val Thr Val Thr Pro Pro Asp
Gly Thr 210 215 220Ser Ala Leu Val Glu
Cys Glu Cys Gly Gly Thr Lys Ile Ser Glu Thr225 230
235 240Ile Asn Lys Thr Lys Gln Phe Ser Gln Cys
Thr Lys Lys Glu Gln Cys 245 250
255Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr Asn Ser Asp Lys
260 265 270Leu Pro Lys Ala Ala
Gly Ala Thr Leu Lys Gly Lys Leu His Val Pro 275
280 285Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu
Ala Pro Glu Pro 290 295 300Met Ile Thr
Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys305
310 315 320Asn Pro Thr Tyr Leu Ile Thr
Arg Gln Leu Ala Asp Glu Pro His Tyr 325
330 335Thr His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn
Phe Thr Val Thr 340 345 350Glu
Lys Gly Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys Arg Phe 355
360 365Trp Ala Gln Glu Thr Ala Pro Gly Asn
Pro His Gly Leu Pro His Glu 370 375
380Val Ile Thr His Tyr Tyr His Arg Tyr Pro Met Ser Thr Ile Leu Gly385
390 395 400Leu Ser Ile Cys
Ala Ala Ile Ala Thr Val Ser Val Ala Ala Ser Thr 405
410 415Trp Leu Phe Cys Arg Ser Arg Val Ala Cys
Leu Thr Pro Tyr Arg Leu 420 425
430Thr Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala
435 440 445Arg Thr Ala Arg Ala
45054442PRTArtificial SequenceSynthetic VEEV E1 54Tyr Glu His Ala Thr Thr
Met Pro Ser Gln Ala Gly Ile Ser Tyr Asn1 5
10 15Thr Ile Val Asn Arg Ala Gly Tyr Ala Pro Leu Pro
Ile Ser Ile Thr 20 25 30Pro
Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu Glu Tyr Val Thr 35
40 45Cys His Tyr Lys Thr Gly Met Asp Ser
Pro Ala Ile Lys Cys Cys Gly 50 55
60Ser Gln Glu Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys Lys Val65
70 75 80Phe Thr Gly Val Tyr
Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys 85
90 95Asp Thr Glu Asn Thr Gln Val Ser Lys Ala Tyr
Val Met Lys Ser Asp 100 105
110Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala Ser
115 120 125Val Gln Ala Phe Leu Asn Ile
Thr Val Gly Glu His Ser Ile Val Thr 130 135
140Thr Val Tyr Val Asn Gly Glu Thr Pro Val Asn Phe Asn Gly Val
Lys145 150 155 160Ile Thr
Ala Gly Pro Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg Lys
165 170 175Ile Val Gln Tyr Ala Gly Glu
Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr 180 185
190Gly Ala Gly Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg
Thr Val 195 200 205Ser Ser Ser Asp
Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg Pro 210
215 220Lys Ala Gly Ala Ile His Val Pro Tyr Thr Gln Ala
Pro Ser Gly Phe225 230 235
240Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu Lys Phe Thr Ala Pro
245 250 255Phe Gly Cys Glu Ile
Tyr Thr Asn Pro Ile Arg Ala Glu Asn Cys Ala 260
265 270Val Gly Ser Ile Pro Leu Ala Phe Asp Ile Pro Asp
Ala Leu Phe Thr 275 280 285Arg Val
Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu Cys Thr Leu Asn 290
295 300Glu Cys Val Tyr Ser Ser Asp Phe Gly Gly Ile
Ala Thr Val Lys Tyr305 310 315
320Ser Ala Ser Lys Ser Gly Lys Cys Ala Val His Val Pro Ser Gly Thr
325 330 335Ala Thr Leu Lys
Glu Ala Ala Val Glu Leu Thr Glu Gln Gly Ser Ala 340
345 350Thr Ile His Phe Ser Thr Ala Asn Ile His Pro
Glu Phe Arg Leu Gln 355 360 365Ile
Cys Thr Ser Tyr Val Thr Cys Lys Gly Asp Cys His Pro Pro Lys 370
375 380Asp His Ile Val Thr His Pro Gln Tyr His
Ala Gln Thr Phe Thr Ala385 390 395
400Ala Val Ser Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly
Gly 405 410 415Ser Ala Val
Ile Ile Ile Ile Gly Leu Val Leu Ala Thr Ile Val Ala 420
425 430Met Tyr Val Leu Thr Asn Gln Lys His Asn
435 44055275PRTArtificial SequenceSynthetic VEEV
Capsid 55Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg1
5 10 15Asn Pro Phe Ala
Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg
Ser Met Ala Asn Leu 35 40 45Thr
Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln
Lys Gly Gly Gly Gln Gly65 70 75
80Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro
Pro 85 90 95Asn Pro Lys
Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110Gly Lys Arg Gln Arg Met Val Met Lys Leu
Glu Ser Asp Lys Thr Phe 115 120
125Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130
135 140Gly Lys Leu Phe Arg Pro Met His
Val Glu Gly Lys Ile Asp Asn Asp145 150
155 160Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys
Tyr Asp Leu Glu 165 170
175Tyr Ala Asp Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr
180 185 190His Glu Lys Pro Gln Gly
Tyr Tyr Ser Trp His His Gly Ala Val Gln 195 200
205Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala
Lys Gly 210 215 220Asp Ser Gly Arg Pro
Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile225 230
235 240Val Leu Gly Gly Val Asn Glu Gly Ser Arg
Thr Ala Leu Ser Val Val 245 250
255Met Trp Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys
260 265 270Glu Gln Trp
27556414PRTPlasmodium falciparum 56Met Met Arg Lys Leu Ala Ile Leu Ser
Val Ser Ser Phe Leu Phe Val1 5 10
15Glu Ala Leu Phe Gln Glu Tyr Gln Cys Tyr Gly Ser Ser Ser Asn
Thr 20 25 30Arg Val Leu Asn
Glu Leu Asn Tyr Asp Asn Ala Gly Thr Asn Leu Tyr 35
40 45Asn Glu Leu Glu Met Asn Tyr Tyr Gly Lys Gln Glu
Asn Trp Tyr Ser 50 55 60Leu Lys Lys
Asn Ser Arg Ser Leu Gly Glu Asn Asp Asp Gly Asn Asn65 70
75 80Asn Asn Gly Asp Asn Gly Arg Glu
Gly Lys Asp Glu Asp Lys Arg Asp 85 90
95Gly Asn Asn Glu Asp Asn Glu Lys Leu Arg Lys Pro Lys His
Lys Lys 100 105 110Leu Lys Gln
Pro Gly Asp Gly Asn Pro Asp Pro Asn Ala Asn Pro Asn 115
120 125Val Asp Pro Asn Ala Asn Pro Asn Val Asp Pro
Asn Ala Asn Pro Asn 130 135 140Val Asp
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn145
150 155 160Ala Asn Pro Asn Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn 165
170 175Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 180 185 190Ala
Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 195
200 205Val Asp Pro Asn Ala Asn Pro Asn Ala
Asn Pro Asn Ala Asn Pro Asn 210 215
220Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn225
230 235 240Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 245
250 255Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn 260 265
270Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
275 280 285Lys Asn Asn Gln Gly Asn Gly
Gln Gly His Asn Met Pro Asn Asp Pro 290 295
300Asn Arg Asn Val Asp Glu Asn Ala Asn Ala Asn Asn Ala Val Lys
Asn305 310 315 320Asn Asn
Asn Glu Glu Pro Ser Asp Lys His Ile Glu Gln Tyr Leu Lys
325 330 335Lys Ile Lys Asn Ser Ile Ser
Thr Glu Trp Ser Pro Cys Ser Val Thr 340 345
350Cys Gly Asn Gly Ile Gln Val Arg Ile Lys Pro Gly Ser Ala
Asn Lys 355 360 365Pro Lys Asp Glu
Leu Asp Tyr Glu Asn Asp Ile Glu Lys Lys Ile Cys 370
375 380Lys Met Glu Lys Cys Ser Ser Val Phe Asn Val Val
Asn Ser Ser Ile385 390 395
400Gly Leu Ile Met Val Leu Ser Phe Leu Phe Leu Asn Thr Arg
405 410
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