Patent application title: PROCESS FOR CONCENTRATION OF A POLYPEPTIDE
Inventors:
IPC8 Class: AA61K3845FI
USPC Class:
1 1
Class name:
Publication date: 2018-10-11
Patent application number: 20180289777
Abstract:
The present invention comprises a method of concentrating a composition
comprising a polypeptide of interest and the use of such concentrated
composition for the treatment of diseases in mammals, in particular by
subcutaneous injection.Claims:
1-28. (canceled)
29. A pharmaceutical composition for treatment of metachromatic leukodystrophy (MLD) comprising recombinant arylsulfatase A (ASA) at a concentration of at least 25 mg/ml, wherein the amount of ASA present as aggregates constitutes at least few and less than 5 w/w % of the total amount of ASA in the composition.
30. The pharmaceutical composition of claim 29, wherein the composition comprises ASA at a concentration between 25-500 mg/ml.
31. The pharmaceutical composition of claim 30, wherein the ASA is at a concentration of at least 30 mg/ml.
32. The pharmaceutical composition of claim 29, wherein the amount of recombinant ASA present as aggregates constitutes less than 1 w/w % of the total amount of ASA in the composition.
33. The pharmaceutical composition of claim 29, wherein the recombinant ASA is in an aqueous solution.
34. The pharmaceutical composition of claim 29, wherein the composition further comprises a detergent.
35. The pharmaceutical composition of claim 29, wherein the recombinant ASA contains mannose-6-phosphate residues.
36. The pharmaceutical composition of claim 29, wherein the recombinant ASA comprises an amino acid sequence selected from the group consisting of: (i) an amino acid sequence as defined by any one of SEQ ID NOs: 18, 19 and 20; and (ii) an amino acid at least 95% identical to any one of SEQ ID NOs: 18, 19 or 20.
37. The pharmaceutical composition of claim 29, wherein the recombinant ASA is recombinant human ASA (rhASA).
38. The pharmaceutical composition of claim 29, wherein the recombinant ASA is produced in mammalian host cells.
39. The pharmaceutical composition of claim 38, wherein the mammalian host cells are human cells.
40. The pharmaceutical composition of claim 38, wherein the mammalian host cells are CHO cells.
41. The pharmaceutical composition of claim 29, wherein the recombinant ASA is encoded by a nucleic acid sequence comprising a sequence selected from the group consisting of: (i) a nucleic acid sequence as defined by any of SEQ ID NOs: 16 and 17; and (ii) a nucleic acid sequence at least 95% identical to any one of SEQ ID NOs: 16 and 17.
Description:
CROSS REFERENCE TO RELATED APPLICATIONS
[0001] This application is a continuation application of U.S. application Ser. No. 15/041,841, filed Feb. 11, 2016; which is a divisional of U.S. application Ser. No. 12/295,848, filed Oct. 2, 2008; based on the .sctn. 371 National Stage Entry of International Application No. PCT/DK2007/000177; which claims priority to Foreign Applications Nos. PA 2006 00922 and PA 2006 00488, filed in Denmark, on Jul. 5, 2006 and Apr. 4, 2006, respectively; the disclosures of each of which are hereby incorporated by reference.
FIELD OF THE INVENTION
[0002] The present invention relates to a method for concentrating a polypeptide of interest, to the use of a composition comprising a concentrated polypeptide of interest as a medicament for subcutaneous injection and to a composition comprising at least 10 mg/ml polypeptide of interest.
SEQUENCE LISTING
[0003] The instant application contains a Sequence Listing which has been submitted electronically and is hereby incorporated by reference in its entirety. The file named "Sequence Listing.txt" was created on May 3, 2017, and is 84,770 bytes in size.
BACKGROUND OF THE INVENTION
[0004] Some polypeptides are useful as a medicament for the prevention and/or treatment of certain diseases. The ability to inject a medicament subcutaneously is an advantage, as it makes it easy for the patients to administer the medication to themselves.
[0005] As there are physiological restrains on how large a volume it is possible to inject subcutaneously. Thus it is an advantage for medicaments which are to be administered subcutaneously that they are available in a high concentration so as to ensure that the patient receives an adequate amount of the medicament and/or to avoid multiple subcutaneous injections.
[0006] WO 99/37325 discloses methods of treating and preventing disease caused by absence or deficiency of the activity of enzymes belonging to the heme biosynthetic pathway. WO 03/002731 discloses a process for purification of recombinant porphobilinogen deaminase on an industrial scale and to the use of the purified product for the preparation of a medicament. Similarly, WO 02/099092 and WO 2005/094874 provides lysosomal alpha-mannosidase and therapeutic use hereof. Finally, WO 2005/073367 provides a process for purification of arylsulfatase A and use of the enzyme in the treatment of metachromatic leukodystrophy.
[0007] The present invention relates to a method for concentrating a polypeptide of interest, and to the use of a composition, comprising a concentrated polypeptide of interest for the manufacture of a medicament for subcutaneous injection into mammal.
SUMMARY OF THE INVENTION
[0008] The present invention relates in one aspect to a method of concentrating a composition comprising a polypeptide of interest comprising:
[0009] a) Centrifugation and/or filtration of a composition comprising a polypeptide of interest
[0010] b) Concentrating the supernatant or retentate, respectively, obtained from step a).
[0011] In another aspect, the present invention relates to a composition comprising at least 10 mg/ml polypeptide of interest.
[0012] In yet another aspect, the present invention relates to use of a composition comprising 75-250 mg/ml polypeptide of interest for the manufacture of a medicament for subcutaneous injection into a mammal.
[0013] In yet another aspect, the present invention relates to a method of treating a mammal for Acute Intermittent Porphyria comprising injecting subcutaneously a composition of 500-300 mg/ml PBGD.
[0014] In yet another aspect, the present invention relates a method of treating a mammal for metachromatic leukodystrophy comprising subcutaneous injection of a composition of 50-300 mg/ml arylsulfatase A.
[0015] In yet another aspect, the present invention relates a method of treating a mammal for the lysosomal storage disorder alpha-mannosidosis comprising subcutaneous injection of a composition of 50-300 mg/ml lysosomal alpha-mannosidase.
[0016] In yet another aspect, the present invention relates a method of treating a mammal for Krabbe disease comprising subcutaneous injection of a composition of 50-300 mg/ml galactosylcerebrosidase.
Definitions
[0017] For purposes of the present invention, alignments of sequences and calculation of homology scores may be done using a full Smith-Waterman alignment, useful for both protein and DNA alignments. The default scoring matrices BLOSUM50 and the identity matrix are used for protein and DNA alignments respectively. The penalty for the first residue in a gap is--12 for proteins and--16 for DNA, while the penalty for additional residues in a gap is--2 for proteins and--4 for DNA.
[0018] Alignment may be made with the FASTA package version v20u6 (W. R. Pearson and D. J. Lipman (1988), "Improved Tools for Biological Sequence Analysis", PNAS 85:2444-2448, and W. R. Pearson (1990) "Rapid and Sensitive Sequence Comparison with FASTP and FASTA", Methods in Enzymology, 183:63-98).
[0019] Multiple alignments of protein sequences may be made using "Clustal W" (Thompson, J. D., Higgins, D. G. and Gibson, T J. (1994) CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22:4673-4680). Multiple alignment of DNA sequences may be done using the protein alignment as a template, replacing the amino acids with the corresponding codon from the DNA sequence.
[0020] In the context of the present invention, the term "E. C." (Enzyme Class) refers to the internationally recognized enzyme classification system, Recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology, Academic Press, Inc.
[0021] The term "origin" used in the context of amino acid sequences, e.g. proteins, or nucleic acid sequences is to be understood as referring to the organism from which it derives. Said sequence may be expressed by another organism using gene technology methods well known to a person skilled in the art. This also encompasses sequences which have been chemically synthesized. Furthermore, said sequences may comprise minor changes such as codon optimization, i.e. changes in the nucleic acid sequences which do not affect the amino acid sequence.
DETAILED DESCRIPTION OF THE INVENTION
[0022] Polypeptide of Interest
[0023] The polypeptide of the present invention may in particular be a hormone or hormone variant, an enzyme, a receptor or portion thereof, an antibody or portion thereof, an allergen or a reporter. The polypeptide of interest may in particular be an enzyme selected from one of six major enzyme groups, such as an oxidoreductase (E.C.1), a transferase (E.C.2), a hydrolase (E.C.3), a lyase (E.C.4), an isomerase (E.C.5), or a ligase (E.C.6). In a more particular aspect, the polypeptide of interest may be an aminopeptidase, amylase, carbohydrase, carboxypeptidase, catalase, cellulase, cellobiohydrolase, chitinase, cutinase, cyclodextrin glycosyltransferase, deoxyribonuclease, endoglucanase, esterase, alpha-galactosidase, beta-galactosidase, glucoamylase, alpha-glucosidase, beta-glucosidase, invertase, laccase, lipase, mannosidase, mutanase, oxidase, pectinolytic enzyme, peroxidase, phosphoiipase, phytase, polyphenoloxidase, proteolytic enzyme, ribonuclease, transglutaminase, xylanase, or beta-xylosidase.
[0024] The polypeptide of interest may in particular be a polypeptide which is useful as a medicament.
[0025] Examples of a suitable polypeptide of interest include but is not limited to one selected from the group consisting of a phorphobilinogen deaminase, an aryl sulfatase, an alpha-mannosidase and a galactocerebrosidase.
[0026] In principle a polypeptide of interest derivable from any source may be treated according to the methods of the present invention.
[0027] In a particular embodiment, the polypeptide of interest may be of human origin. Especially in the context of using a polypeptide of interest for the manufacture of a medicament, which is to be administered to humans may the polypeptide be of human origin as this may minimize the risk of unwanted allergic reactions. Natural variations of human polypeptide due to e.g. polymorphism are in the context of the present invention included in the term "human origin".
[0028] The polypeptide of interest may in particular be produced as a recombinant protein, i.e. a nucleotide sequence encoding the polypeptide of interest may be introduced into a cell for expression of the polypeptide of interest. The recombinant expression may be homologous or heterologous, i.e. the polypeptide of interest may be expressed in cell which it is naturally expressed by (homologous expression) or it may be expressed by a cell which it is not naturally expressed by (heterologous expression).
[0029] The recombinant polypeptide of interest may be expressed by any cell suitable for recombinant production of the particular polypeptide of interest. Examples of suitable cells include but are not limited to prokaryotic cells, such as an E. coli cell or a Bacillus cell. Examples of suitable eukaryotic cells include but are not limited to a yeast ceil or a mammalian cell such as a Chinese Hamster Ovary (CHO). Alternatively, it may be a human cell.
[0030] Suitable host cells for the expression of glycosylated polypeptide are derived from multicellular organisms. Examples of invertebrate cells include plant and insect cells. However, the host cell may also be a vertebrate cell, and propagation of vertebrate cells in culture (tissue culture) has become a routine procedure
[0031] The term "recombinant polypeptide" or "recombinant polypeptide of interest" denotes herein a recombinant produced polypeptide.
[0032] Reference to a particular polypeptide of interest, includes in the context of the present invention, also functionally equivalent parts or analogues of the polypeptide of interest. For example; if the polypeptide of interest is an enzyme, a functionally equivalent part of the enzyme could be a domain or subsequence of the enzyme, which includes the necessary catalytic site to enable the domain or subsequence to exert substantially the same enzymatic activity as the full-length enzyme, or alternatively a gene coding for the catalyst. The term "substantially the same enzymatic activity" refers to an equivalent part, or analogue having at least 50%, preferably at least 60%, more preferably at least 70%, more preferably at least 75%, more preferably at least 80%, more preferably at least 85%, more preferably at least 90%, more preferably at least 95% and most preferably at least 97%, at least 98% or at least 99% of the activity of the natural enzyme. An example of an enzymatically equivalent analogue of the enzyme could be a fusion protein, which includes the catalytic site of the enzyme in a functional form, but it can also be a homologous variant of the enzyme derived from another species. Also, completely synthetic molecules that mimic the specific enzymatic activity of the relevant enzyme would also constitute "enzymatic equivalent analogues".
[0033] Generally, the skilled person will be able to readily devise appropriate assays for the determination of enzymatic activity. For PBGD, however, a suitable assay is described in WO 03/002731, in example 2, as well as in the experimental sections of the present applications. Arylsulfatase, in addition to its natural substrates, is also able to catalyze the hydrolysis of the synthetic, chromogenic substrate, para-Nitrocatechol sulfate (pNCS). The product, para-Nitrocatechol (pNC), absorbs light at 515 nm. An assay for determination of aryl sulfatase activity is described in details in WO 2005/073367 and in Fluharty et al. 1978, Meth. Enzymol. 50:537-47. For LAMAN, an appropriate enzyme activity assay is disclosed in WO 02/099092.
[0034] Porphobilinogen Deaminase
[0035] In one embodiment, the polypeptide of interest of the invention may be porphobilinogen deaminase, (also known as porphobilinogen ammonia-lyase (polymerizing)), E.C. 4.3.1.8. (Waldenstrom 1937. J. Acta.Med. Scand. Supp1.8). Porphobilinogen deaminase is the third enzyme in the heme biosynthetic pathway. E.C. 4.3.1.8 has been transferred to E.C. 2.5.1.61, so porphobilinogen deaminase (PBGD) is now placed under this E.C. number.
[0036] Porphobilinogen deaminase catalyzes the reaction of 4 porphobilinogen+H.sub.2O=hydroxymethylbilane+4 NH.sub.3.
[0037] PBDG is important in relation to Acute intermittent porphyria (AIP), which is an autosomal dominant disorder in man caused by a defect (50% reduction of activity) of PBDG (see WO01/07065 for further details in relation to this).
[0038] Porphobilinogen deaminase is in short known as PBGD and in the context of the present invention these two terms may be used inter-changeably with one another.
[0039] For recombinant expression of PBGD, a host cell may in particular be a yeast cell or an E. coli cell.
[0040] For a detailed example of construction of a recombinant E. coli cell, reference is made to example 1 of WO01/07065 and for construction of recombinant HeLa cells and NIH 3T3 cells capable of expressing mouse PBGD, reference is made to example 6, of WO01/07065.
[0041] The term "recombinant porphobilinogen deaminase (rPBGD)," denotes herein a recombinant produced PBGD. In the following, this enzyme and the recombinant human form will be termed "PBGD" and "rhPBGD", respectively. Within this term is also included an enzymatically equivalent part or analogue of PBGD. One example of an enzymatically equivalent part of the enzyme, could be a domain or subsequence of the enzyme which includes the necessary catalytic site to enable the domain or subsequence to exert substantially the same enzymatic activity as the full-length enzyme or alternatively a gene coding for the catalyst. The term "substantially the same enzymatic activity" refers to an equivalent part or analogues enzyme having at least 50%, preferably at least 60%, more preferably at least 70%, more preferably at least 75%, more preferably at least 80%, more preferably at least 85%, more preferably at least 90%, more preferably at least 95% and most preferably at least 97%, at least 98% or at least 99% of the activity of natural human rhPBGD measured in the rhPBGD activity assay described in example 2 of WO 03/002731. An example of an enzymatically equivalent analogue of the enzyme could be a fusion protein which includes the catalytic site of the enzyme in a functional form, but it can also be a homologous variant of the enzyme derived from another species. Also, completely synthetic molecules that mimic the specific enzymatic activity of the relevant enzyme would also constitute "enzymatic equivalent analogues".
[0042] An example of PBGD which may be used in the present invention includes any of those shown in Sequence 1-10 of the present application, or in Genebank no. X04217, X04808 or M95623.
[0043] Aryl Sulfatase
[0044] In another embodiment of the present invention the polypeptide of interest may be an arylsulfatase A.
[0045] Arylsulfatase A catalyzes the reaction of a cerebroside 3-sulfate+H2O=a cerebroside+sulphate.
[0046] ASA has been purified from a variety of sources including human liver, placenta, and urine. It is an acidic glucoprotein with a low isoelectric point. Above pH 6.5, the enzyme exists as a dimer with a molecular weight of approximately 110 kDa. ASA undergoes a pH-dependent polymerisation forming an octamer at pH 4.5. In human urine, the enzyme consists of two non-identical subunits of 63 and 54 kDa. ASA purified from human liver, placenta, and fibroblasts also consist of two subunits of slightly different sizes varying between 55 and 64 kDa. As in the case of other lysosomal enzymes, ASA is synthesized on membrane-bound ribosomes as a glycosylated precursor. It then passes through the endoplasmic reticulum and Golgi, where its N-linked oligosaccharides are processed with the formation of phosphorylated and sulfated oligosaccharide of the complex type (Waheed A et al. Biochim Biophys Acta. 1985, 847, 53-61, Braulke T et al. Biochem Biophys Res Commun. 1987, 143, 178-185). In normal cultured fibroblasts, a precursor polypeptide of 62 kDa is produced, which translocates via mannose-6-phosphate receptor binding (Braulke T et al. J Biol Chem. 1990, 265, 6650-6655) to an acidic prelysosomal endosome (Kelly B M et al. Eur J Cell Biol. 1989, 48, 71-78).
[0047] The arylsulfatase A may in particular be of human origin. The length (18 amino acids) of the human ASA signal peptide is based on the consensus sequence and a specific processing site for a signal sequence. Hence, from the deduced human ASA cDNA (EMBL GenBank accession numbers 304593 and X521151) the cleavage of the signal peptide should be done in all cells after residue number 18 (Ala), resulting in the mature form of the human ASA. In the following, recombinant arylsulfatase A will be abbreviated rASA, the mature form of arylsulfatase A including the mature form of human ASA will be termed "mASA" and the mature recombinant human ASA will be termed "mrhASA".
[0048] A protein modification has been identified in two eukaryotic sulfatases (ASA and arylsulfatase B (ASB)) and for one from the green alga Volvox carteri (Schmidt B et al. Cell. 1995, 82, 271-278, Selmer Tet al. Eur J Biochem. 1996, 238, 341-345). This modification leads to the conversion of a cysteine residue, which is conserved among the known sulfatases, into a 2-amino-3-oxopropionic acid residue (Schmidt B et al. Cell, 1995, 82, 271-278). The novel amino acid derivative is also recognized as C*-formylglycin (FGly). In ASA and ASB derived from MSD cells, the Cys-69 residue is retained. Consequently, it is proposed that the conversion of the Cys-69 to FGly-69 is required for generating catalytically active ASA and ASB, and that deficiency of this protein modification is the cause of MSD. Cys-69 is referred to the precursor ASA which has an 18 residue signal peptide. In the mASA the mentioned cysteine residue is Cys-51. Further investigations have shown that a linear sequence of 16 residues surrounding the Cys-51 in the mASA is sufficient to direct the conversion and that the protein modification occurs after or at a late stage of co-translational protein translocation into the endoplasmic reticulum when the polypeptide is not yet folded to its native structure (Dierks T et al. Proc Natl Acad Sci. 1997, 94, 11963-1196, Wittke, D. et al. (2004), Acta Neuropathol. (Berl.), 108, 261-271).
[0049] Multiple forms of ASA have been demonstrated on electrophoresis and isoelectric focusing of enzyme preparations from human urine, leukocytes, platelets, cultured fibroblasts and liver. Treatment with endoglycosidase H, sialidase, and alkaline phosphatase reduces the molecular size and complexity of the electrophoretic pattern, which suggests that much of the charge heterogeneity of ASA is due to variations in the carbohydrate content of the enzyme.
[0050] The arylsulfatase A may in particular be a form of arylsulfatase A, which is capable of crossing the blood brain barrier and/or a form of rASA, which possesses specific tags for entry into target cells within the brain. In particular, it may be a rASA, which is efficiently endocytosed in vivo via the mannose-6-phosphate pathway.
[0051] Thus the ASA may in particular be covalently bound to a so-called tag, peptides or proteins as vehicles or toxins as vehicles which are capable of increasing and/or facilitating transport of ASA over the blood-brain barrier and/or across cellular membranes in general (Schwarze et al., Trends Cell Biol. 2000; 10(7): 290-295; Lindgren et al., Trends Pharmacol. Sci. 2000; 21(3): 99-103). An ASA molecule containing such peptide sequences can be produced by expression techniques. The protein transduction process is not cell type specific and the mechanism by which it occurs is not fully elucidated, however, it is believed that it takes place by some sort of membrane perturbation and penetration process that is receptor independent. A partially unfolded state of the molecule may facilitate the process but is not essential.
[0052] An example of a suitable tag includes but is not limited to the mannose-6-phosphate tag.
[0053] Examples of peptides or proteins as vehicle include but are not limited to so-called protein-transducing domains. Examples of suitable protein-transducing domains include but are not limited to those mentioned in WO 2005/073367, which is incorporated herein by reference. Hence the protein-transducing domain may be the 11 residue basic peptide from the HIV TAT protein -YGRKKRRQRRR (Schwarze et al., Trends Cell Biol. 2000; 10(7): 290-295), a synthetic version of TAT YARAAARQARA that confers more alpha-helicity and amphipathic nature to the sequence (Ho et al., Cancer Res. 2001; 61(2):474-477), a synthetic leader peptide composed of poly R or a mixture of basic R and K residues in combination with other amino acids and peptides based on hydrophobic, signal sequence moieties from either beta-3 integrin or Kaposi's sarcoma FGF (Dunican et al. Biopolymers 2001; 60(1): 45-60).
[0054] Examples of suitable toxins as vehicles include but are not limited to those described in WO 2005/073367, which is incorporated herein by reference.
[0055] The ASA may in particular comprise a nucleic acid sequence, which encodes:
[0056] (a) the amino acid sequence of SEQ ID NO: 2 in WO 2005/073367;
[0057] (b) a portion of the sequence in (a), which is enzymatically equivalent to recombinant human arylsulfatase A
[0058] (c) an amino acid sequence analogue having at least 75% sequence identity to any one of the sequences in (a) or (b) and at the same time comprising an amino acid sequence, which is enzymatically equivalent to recombinant human arylsulfatase A.
[0059] In the present context, an amino acid sequence or a portion of an amino acid sequence which is a polypeptide capable of hydrolyzing an amount of the arylsulfatase A substrate pNCS at 37.degree. C. a rate corresponding to a specific activity of at least 20 U/mg polypeptide (preferably 50 U/mg polypeptide) when determined in an assay for measuring arylsulfatase A activity as described In example 1 of WO 2005/073367, and/or a polypeptide, which is capable of hydrolyzing at least 40% of labelled arylsulfatase A substrate, fx. 14 C palmitoyl sulfatide, loaded into MLD fibroblasts, when assayed by incubation at a dose level of 25 mU/ml in an assay as described in example 2 of WO 2005/073367.
[0060] The ASA may in another embodiment in particular comprise:
[0061] (a) the nucleic acid sequence of SEQ ID NO: 1 in WO 2005/073367
[0062] (b) a portion of the sequence in (a), which encodes an amino acid sequence, which is enzymatically equivalent to recombinant human arylsulfatase A
[0063] (c) a nucleic acid sequence analogue having at least 75% sequence identity to any one of the sequences in (a) or (b) and at the same time encoding an amino acid sequence, which is enzymatically equivalent to recombinant human arylsulfatase A
[0064] It may be preferred that the degree of sequence identity between the above mentioned nucleic acid sequence and SEQ ID NO: 1 of WO 2005/073367 is at least 80%, such as at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, or at least 99%. It may be equally preferred that the degree of sequence identity between the amino acid sequence encoded by the above mentioned nucleic acid sequence and SEQ ID NO: 2 WO 2005/073367 is at least 80%, such as at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, or at least 99%.
[0065] For the purpose of the present invention it is preferred that the arylsulfatase A is a recombinant enzyme, particularly preferred is recombinant human arylsulfatase A (rhASA).
[0066] It is preferred that rASA is produced in a mammalian cell or cell line and that said mammalian cell or cell line produces a glycoform of rASA, which is efficiently endocytosed in vivo via the mannose-6-phosphate receptor pathway. Specifically, the preferred glycoform of rASA comprises an amount of exposed mannose-6-phosphate, which allows efficient endocytosis of rASA in vivo via the mannose-6-phosphate pathway.
[0067] In a particular embodiment at least one of the produced glycoforms of rASA is similar to a glycoform produced in CHO cells.
[0068] The post translational modification of the cysteine residue in position 51, in the mature human arylsulfatase A, is relevant for the activity of the enzyme. Accordingly, in a preferred embodiment of the present invention production of the arylsulfatase A or its equivalent occurs at a rate and under conditions, which result in a product comprising an isoform of the enzyme in which the amino acid corresponding to Cys-69 in SEQ ID NO: 2 of WO 2005/073367 is converted to Formylglycine, corresponding to Fgly-51 in SEQ ID NO: 3 of WO 2005/073367. SEQ ID NO: 4 of WO 2005/073367 represents mature human arylsulfatase A after cleavage of the 18 amino acid signal peptide but prior to modification of C-51.
[0069] Thus in another embodiment of the present invention the ASA or its enzymatical equivalent may be selected from the group consisting of
[0070] (a) the amino acid sequence of SEQ ID NO: 3 of WO 2005/073367;
[0071] (b) a portion of the sequence in (a), which is enzymatically equivalent to recombinant human arylsulfatase A
[0072] (c) an amino acid sequence analogue having at least 75% sequence identity to any one of the sequences in (a) or (b) and at the same time being enzymatically equivalent to recombinant human arylsulfatase A.
[0073] It may be preferred that the degree of sequence identity between the enzyme produced according to the invention and SEQ ID NO: 3 of WO 2005/073367 or SEQ ID NO: 4 of WO 2005/073367 is at least 80%, such as at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, or at least 99%.
[0074] For the biological activity and the effects of the enzyme in vivo requires to be optimal it is an advantage if an adequate amount of the enzyme has acquired a glycosylation pattern as described above and has been modified post translationally at position 51. Thus at least 50%, 60%, 70%, 80%, 90%, 95% or 98% of the ASA of the present invention may be in the above described glycoform/isoform.
[0075] The ASA of the present invention may, in terms of its structure be different from the rASA according to SEQ ID NO: 3 of 2005/073367. It may be an advantage that the sequence of amino acid residues surrounding the Cys-51 is identical or has a high degree of sequence identity to the corresponding sequence in SEQ ID NO: 3. Thus, it may be preferred that a linear sequence of 20 amino acids, such as 19, 18, 17, 16, 15, 14, 13, 12, 11, 10, 9, 8, 7, 6, 5 or 4 amino acid residues surrounding the Cys-51 in the arylsulfatase A is identical or at least 90% identical, such as 95%, 96%, 97%, 98%, or 99% identical to the corresponding sequence in SEQ ID NO: 3 of 2005/073367. As the active form of rASA within the lysosomes is an octamer the ASA of the present invention may in particular be a rASA which is an octamer or assembles into an octamer under physiological conditions.
[0076] The enzyme activity of ASA, which is to be understood as the catalytic activity of the rASA, may be measured in an enzyme assay based on the rASA mediated hydrolysis of either a detectable substrate or a substrate, which leads to a detectable end product. In a preferred aspect the assay is based on hydrolysis of the synthetic, chromogenic substrate, para-Nitrocatechol sulphate (pNCS) which has an end product, para-Nitrocatechol (pNC) that absorbs light at 515 nm.
[0077] Lysosomal Alpha-Mannosidase
[0078] In yet another embodiment, the polypeptide of interest may be a lysosomal alpha-mannosidase (LAMAN). Lysomal alpha-mannosidase belongs to EC 3.2.1.24 and is an exoglycosidase which hydrolyses the terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides from the non-reducing end during the ordered degradation of N-linked glycoproteins (Aronson and Kuranda FASEB J 3:2615-2622. 1989). In the context of the present invention the term lysosomal alpha-mannosidase may be used interchangeably with the short term LAMAN.
[0079] The LAMAN of the present invention may in particular be of human origin. The human enzyme is synthesized as a single polypeptide of 1011 amino acids with a putative signal peptide of 49 residues that is processed into three main glycopeptides of 15, 42, and 70 KD (Nilssen et al. Hum.Mol.Genet. 6, 717-726. 1997).
[0080] The gene coding for LAMAN (MANB) is located at chromosome 19 (19cen-q12), (Kaneda et al. Chromosoma 95:8-12. 1987). MANB consists of 24 exons, spanning 21.5 kb (GenBank accession numbers U60885-U60899; Riise et al. Genomics 42:200-207. 1997). The LAMAN transcript is 3,500 nucleotides (nts) and contains an open reading frame encoding 1,011 amino acids (GenBank U60266.1).
[0081] The cloning and sequencing of the human cDNA encoding LAMAN has been published in three papers (Nilssen et al. Hum.Mol.Genet. 6, 717-726. 1997; Liao et al. J.Biol.Chem. 271, 28348-28358. 1996; Nebes et al. Biochem.Biophys.Res.Cmmun, 200, 239-245. 1994). Curiously, the three sequences are not identical. When compared to the sequence of Nilssen et al. (accession # U60266.1) a TA to AT change at positions 1670 and 1671 resulting in a valine to aspartic acid substitution was found by Liao et al. and Nebes et al.
[0082] In a most preferred embodiment, the lysosomal alpha mannosidase comprises the amino acid sequence of SEQ ID NO.: 1 of WO 2005/094874.
[0083] For practical and economic reasons it is preferred that the LAMAN of the present invention is produced recombinant. By recombinant production it may also be possible to obtain a preparation of the enzyme wherein a large fraction contains mannose-6-phosphate. Recombinant production may be achieved after transfection of a cell using a nucleic acid sequence comprising the sequence of SEQ ID NO: 2 of WO 2005/094874.
[0084] The alpha-mannosidase is preferably made in a mammalian cell system as this will result in a glycosylation profile, which ensures efficient receptor mediated uptake in cells of for instance visceral organs of the body. In particular, it has been found that production of the enzyme in CHO, COS or BHK cells ensures adequate post-translational modification of the enzyme by addition of mannose-6-phosphate residues. In addition a correct sialylation profile is obtained. Correct sialylation is known to be important in order to prevent uptake by the liver, because of exposed galactose residues.
[0085] In even more preferred embodiments the mammalian cell system is therefore selected from the group comprising CHO, COS cells or BHK cells (Stein et al. J Biol Chem. 1989, 264, 1252-1259). It may further be preferred that the mammalian cell system is a human fibroblast cell line.
[0086] In a most preferred embodiment, the mammalian cell system is a CHO cell line.
[0087] In another embodiment, the lysosomal alpha-mannosidase may be a preparation of lysosomal alpha-mannosidase wherein a fraction of said preparation consists of lysosomal alpha mannosidase having one or more N-linked oligosaccharides carrying mannose 6-phosphate groups.
[0088] It is further preferred that a fraction of a preparation of said lysosomal alpha-mannosidase is capable of binding to mannose 6-phosphate receptors.
[0089] The ability of the enzyme to bind to mannose-6-phosphate receptors may be determined in an in vitro assay as described in example 1 of WO 2005/094874. Here, binding of the enzyme to a MPR affinity 300 Matrix provides a measure of its ability to bind to mannose-6-phosphate receptors. In a preferred embodiment of the invention binding of the enzyme to mannose-6-phosphate receptors occurs in vitro.
[0090] In more preferred embodiments of the invention this fraction corresponds to from 1 to 75% of the activity of a preparation of lysosomal alpha-mannosidase, such as from 2 to 70%, such as from 5 to 60%, such as from 10 to 50% such as from 15 to 45%, such as from 20 to 40%, such as from 30 to 35%.
[0091] Accordingly, it is preferred that the lysosomal alpha-mannosidase has a content of mannose 6-phosphate residues allowing mannose 6-phosphate dependent binding of from 2 to 100%, 5 to 95%, 10 to 90%, 20 to 80%, 30 to 70% or 40 to 60% of the amount of enzyme to a Man-6-P-receptor matrix. At present, the degree of phosphorylation has been analyzed in several batches of enzyme and, typically, from 30 to 45% of the enzyme is phosphorylated and binds the affinity matrix.
[0092] It is further preferred that a fraction constituting from 2-100%, 5-90%, 10-80%, 20-75%, 30-70%, 35-65% or 40-60% of the amount of said lysosomal alpha-mannosidase binds to the Man-6-P-receptor with high affinity. Theoretically, two mannose 6-phosphate groups must be positioned close to each other in order for the enzyme to bind a Man-6-P-receptor with high affinity. Recent observations suggest that the distance between the phosphorylated mannose residues must be 40 .ANG. or less in order to obtain high affinity binding. In the human lysosomal alpha-mannosidase according to SEQ ID NO: 1 of WO 2005/094874, the two mannose 6-phosphate residues may be situated at the asparagine residues, in positions 367 and 766. Accordingly, it is preferred that the medicament according to the present invention comprises lysosomal alpha-mannosidase, a fraction of which carries mannose 6-phosphate groups at both of these asparagine residues.
[0093] Preferably, the alpha-mannosidase is made by recombinant techniques. In a further embodiment, the alpha-mannosidase is of human origin (hLAMAN) and still more preferred a mature human alpha-mannosidase (mhLAMAN) or a fragment thereof. The fragment may be modified, however the active sites of the enzyme should be preserved.
[0094] It is to be expected that, in preparations of alpha-mannosidase according to the present invention, one fraction of the enzyme is represented by its precursor form, while other fractions represent the proteolytically processed forms of approximately 55 and 70 kDa.
[0095] Galactocerebrosidase
[0096] In another embodiment the polypeptide of interest may be a galactocerebrosidase, which may be short ended to GALC. Galactocerebrosidase belongs to E.C. 3.1.6.46 and are enzymes capable of catalyzing the reaction of D-galactosyl-N-acylsphingosine+H2O=D-galactose+N-acylsphingosine, thus GALC catalyzes the degradation of galactolipids in for example myelin.
[0097] The GALC enzyme derived from humans is a glycosylated lysosomal enzyme comprising 643 amino acids and with a molecular weight of 72.8 kDa. The GALC of the present invention may in particular be of human origin. In a further embodiment the GALC may be expressed recombinant in one of the previously mentioned host cells. The host cell for recombinant expression of GALC may in particular be a CHO cell.
[0098] In the description and in the claims reference is made to the following amino acid and nucleic acid sequences:
TABLE-US-00001 Sequence Sequence description identifier PBGD coding sequence 1 SEQ ID NO.: 1 PBGD coding sequence 2 SEQ ID NO.: 2 PBGD coding sequence 3 SEQ ID NO.: 3 PBGD coding sequence 4 SEQ ID NO.: 4 PBGD coding sequence 5 SEQ ID NO.: 5 PBGD coding sequence 6 SEQ ID NO.: 6 PBGD coding sequence 7 SEQ ID NO.: 7 PBGD coding sequence 8 SEQ ID NO.: 8 PBGD coding sequence 9 SEQ ID NO.: 9 PBGD coding sequence 10 SEQ ID NO.: 10 PBGD coding sequence, GenBank Acc. No. X04217 SEQ ID NO.: 11 PBGD coding sequence, GenBank Acc. No. X04808 SEQ ID NO.: 12 PBGD coding sequence, GenBank Acc. No. M95623 SEQ ID NO.: 13 PBGD aa sequence from coding sequence, GenBank SEQ ID NO.: 14 Acc. No. M95623, Constitutive form PBGD aa sequence from coding sequence, GenBank SEQ ID NO.: 15 Acc. No. M95623, Erythropoietic form ASA coding sequence Genbank Acc. No. J04593 SEQ ID NO.: 16 ASA coding sequence SEQ ID NO.: 1 of WO 2005/ SEQ ID NO.: 17 073367 ASA aa sequence SEQ ID NO.: 2 of WO 2005/073367 SEQ ID NO.: 18 ASA aa sequence SEQ ID NO.: 3 of WO 2005/073367 SEQ ID NO.: 19 ASA aa sequence SEQ ID NO.: 4 of WO 2005/073367 SEQ ID NO.: 20 LAMAN aa sequence SEQ ID NO.: 1 of WO 2005/ SEQ ID NO.: 21 094874 LAMAN coding sequence SEQ ID NO.: 1 of WO SEQ ID NO,: 22 2005/094874 Galactocerebrosidase coding sequence SEQ ID NO.: 23 Galactocerebrosidase aa sequence SEQ ID NO.: 24
[0099] With reference to these sequences the polypeptide of interest, according to preferred embodiments of the invention, comprises an amino acid selected from the group consisting of:
[0100] i) an amino acid sequence as defined by any of SEQ ID NO.s: 14, 15, 18, 19, 20, 21 and 24;
[0101] ii) a functionally equivalent part of an amino acid sequence as defined in i); and
[0102] iii) a functionally equivalent analogue of an amino acid sequence as defined in i) or ii), the amino acid sequence of said analogue being at least 75% identical to an amino acid sequence as defined in i) or ii).
[0103] In particular embodiments the analogue in iii) is at least 80% identical to a sequence as defined in i) or ii), such as at least 85%, at least 90%, at least 95%, at least 98%, at least 99%, or such as at least 99.5% identical to a sequence as defined in i) or ii).
[0104] Further, the polypeptide of interest may be obtained by recombinant expression using a nucleic acid sequence comprising a sequence selected from the group consisting of:
[0105] i) a nucleic acid sequence as defined by any of SEQ ID NO.s: 1-13, 16, 17, 22 and 23;
[0106] ii) a nucleic acid sequence which is at least 75% identical to a nucleic acid sequence as defined in i).
[0107] For recombinant production of the polypeptide, it may further be preferred that the acid sequence in ii) is at least 80% identical to a sequence as defined in i), such as at least 85%, at least 90%, at least 95%, at least. 98%, at least 99%, or such as at least 99.5% identical to a sequence as defined in i).
[0108] Composition Comprising a Polypeptide of Interest
[0109] The following description of a composition comprising a polypeptide of interest relates both to a composition comprising a polypeptide which is concentrated according to a method of the present invention and it also relates to a composition of the present invention comprising at least 10 mg/ml polypeptide of interest.
[0110] The present invention also relates to a composition comprising at least 10 mg/ml polypeptide of interest, wherein the polypeptide of interest may be any polypeptide according to the present invention, such as in particular rhPBGD, aryl sulfatase, alpha-mannosidase or galactocerebrosidase. Said composition may in particular comprise at least 25 mg/ml polypeptide of interest, such as at least 50 mg/ml or at least 75 mg/ml or at least 100 mg/ml polypeptide of interest. Thus said composition may in particular comprise between 10-1000 mg/ml polypeptide of interest, such as between 10-500 mg/ml or between 10-300 mg/ml or between 10-200 mg/ml or between 25-500 mg/ml or between 25-400 mg/ml or between 40-400 mg/ml or between 40-300 mg/ml or between 50-400 mg/ml or between 50-300 mg/ml or between 75-400 mg/ml or between 75-300 mg/ml or between 100-200 mg/ml or between 100-150 mg/ml polypeptide of interest.
[0111] The composition comprising a polypeptide of interest may in particular be an aqueous solution.
[0112] Besides comprising a high concentration of polypeptide of interest said composition may in particular further comprise no aggregates of the polypeptide of interest or at least only very few aggregates. Hence the amount of polypeptide of interest present as aggregates may in particular constitute less than 5 w/w % of the total amount of polypeptide of interest in the composition. In particular said aggregates may constitute less than 4 w/w %, such as less than 3 w/w %, or less than 2 w/w %, or less than 1 w/w %, or less than 0.5 w/w %, or less than 0.1 w/w % of the total amount of polypeptide of interest. In the present context the term "aggregates" means any form of the polypeptide of interest which is not monomeric. Thus the term encompasses any dimer or multimer of the polypeptide of interest.
[0113] Furthermore, it is an advantage if said composition comprises only the polypeptide of interest or at least only minor traces of other proteins, i.e. proteins different from polypeptide of interest. Hence in a particular embodiment said composition comprises less than 1 w/w %, such as less than 0.5 w/w %, or less than 0.1 w/w %, or less than 0.05 w/w %, or less than 0.01 w/w % other proteins than the polypeptide of interest.
[0114] A range of factors affect the stability and activity of polypeptides and the composition comprising a polypeptide of interest may therefore in particular be optimized to keep the polypeptide of interest as stable as possible.
[0115] The pH generally affects the stability of a polypeptide of interest, thus the pH of a composition comprising a polypeptide of interest may in particular be in the range of 7.5-8.5, such as in particular between pH 7.7-8.2, more particularly between pH 7.8-8.0 or between pH 7.85-7.95, such as pH 7.8 or pH 7.9. This may in particular be the case if the polypeptide of interest is PBGD.
[0116] Thus the composition comprising a polypeptide of interest may in particular comprise a buffer capable of keeping the composition within the described pH range. Examples of such buffers include but are not limited to TRIS-HCL, Na-Citrate and Na.sub.2HPO.sub.4. The concentration of such a buffer may depend on the choice of the particular buffer and the presence of other components in the composition. If the buffer is Na.sub.2HPO.sub.4, the concentration of Na.sub.2HPO.sub.4 may be in the range of 0.5-15 mM, such as in the range of 1-10 mM, or in the range of 1.5-7.5 mM, such as in the range of 1.83-7.4 mM, or in the range of 1.5-3 mM, such as in the range of 1.83-3.7 mM, or in the range of 1.83-2.45 mM, or in the range of 3.5-7.5 mM, such as in the range of 3.6-7.4 mM, or in the range of 5.4-7.4 mM, such as 1.84 mM, or 2.45 mM, or 3.67 mM or 5.51 mM or 7.34 mM.
[0117] If the buffer is TRIS-HCL, the concentration of TRIS-HCL may in particular be in the range of 2-50 mM, such as 2-40 mM, or 2-30 mM, or 2-20 mM, or 2-10 mM, or 5-25 mM, or 5-20 mM, or 8-12 mM, or 9-11 mM, e.g. 10 mM.
[0118] Examples of other compounds which the composition comprising a polypeptide of interest may comprise include but are not limited to amino acids, sugars, alcohols and detergents. Examples of such suitable compounds include but are not limited to glycine, mannitol, sucrose, L-serine, Tween 80 or a combination of one or more of said compounds, The concentration of these compounds depend on the particular compound, but for glycine the concentration may in particular be in the range of 1-200 mM, such as in the range of 5-190 mM, or in the range of 10-180 mM, or in the range of 10-170 mM, or in the range of 20-160 mM, or in the range of 20-150 mM, or in the range of 25-125 mM, or in the range of 5-100 mM, or in the range of 5-90 mM, or in the range of 5-80 mM, or in the range of 5-70 mM, or in the range of 5-60 mM, or in the range of 10-100 mM, or in the range of 10-90 mM, or in the range of 10-80 mM, or in the range of 10-70 mM, or in the range of 10-60 mM, or in the range of 12-60 mM, or in the range of 12-55 mM, or in the range of 13.5-54 mM, or in the range of 10-30 mM, such as in the range of 13.5-27 mM, or in the range of 13.5-18 mM, or in the range of 25-55 mM, such as in the range of 27-54 mM, or in the range of 40-55, such as in the range of 40.5-54 mM, such as 12.5, 13, 13.5, 14, 14.5, 17, 17.5, 18, 18.5, 19, 25, 26, 27, 28, 29, 30, 39.5, 40, 40.5, 41, 41.5, or 53, 53.5, 54.5 or 55 mM.
[0119] The concentration of mannitol may in particular be in the range of 50-1000 mM, such as in the range of 50-900 mM, or in the range of 50-800 mM, or in the range of 50-700 mM, or in the range of 50-600 mM, or in the range of 100-900 mM, or in the range of 100-800 mM, or in the range of 100-700 mM, or in the range of 100-600 mM, or in the range of 100-500 mM, or in the range of 120-525 mM, or in the range of 125-500 mM, or in the range of 100-300 mM, such as in the range of 120-275 mM, or in the range of 120-170 mM, or in the range of 200-600 mM, such as in the range of 225-550 mM, or in the range of 240-510 mM, or in the range of 370-525 mM, such as 120, 125, 130, 160, 165, 166.7, 170, 175, 200, 221, 225, 250, 275, 300, 365, 370, 375, 380, 385, 490, 495, 500, 505 or 510 mM.
[0120] The concentration of sucrose may in particular be in the range of 1-200 mM, such as in the range of 5-190 mM, or in the range of 10-180 mM, or in the range of 10-170 mM, or in the range of 20-160 mM, or in the range of 20-150 mM, or in the range of 25-125 mM, or in the range of 5-100 mM, or in the range of 5-90 mM, or in the range of 5-80 mM, or in the range of 5-70 mM, or in the range of 5-60 mM, or in the range of 10-100 mM, or in the range of 10-90 mM, or in the range of 10-80 mM, or in the range of 10-70 mM, or in the range of 10-60 mM, or in the range of 12-60 mM, or in the range of 12-55 mM, or in the range of 13.5-54 mM, or in the range of 10-30 mM, such as in the range of 13.5-27 mM, or in the range of 13.5-18 mM, or in the range of 25-55 mM, such as in the range of 27-54 mM, or in the range of 40-55, such as in the range of 40.5-54 mM, such as 12.5, 13, 13.5, 14, 14.5, 17, 17.5, 18, 18.5, 19, 25, 26, 27, 28, 29, 30, 39.5, 40, 40.5, 41, 41.5, or 53, 53.5, 53, 54.5 or 55 mM. If sucrose Is included in a composition which also comprises mannitol the concentration of mannitol may in particular be lowered corresponding to the concentration of sucrose; i.e. the concentration of mannitol and sucrose together may in particular be the same as the concentration of mannitol if this was to be used alone.
[0121] The concentration of Tween 80 may in particular be in the range of 0.001-1 w/v %, such as in the range of 0.005-1 w/v %, or in the range of 0.01-1 w/v %, or in the range of 0.001-0.5 w/v %, or in the range of 0.005-0.5 w/v %, or in the range of 0.01-0.5 w/v %, or in the range of 0.05-0.4 w/v %, or In the range of 0.05-0.3 w/v %, or in the range of 0.05-0.2 w/v %, or in the range of 0.075-0.4 w/v %, or in the range of 0.075-0.3 w/v %, or in the range of 0.075-0.2 w/v %, or in the range of 0.09-0.2 w/v %, such as 0.075, 0.08, 0.09, 0.1, 0.125, 0.15, 0.175 or 0.2 w/v %.
[0122] The composition comprising a polypeptide of interest, wherein the polypeptide in particular may be a PBGD, an aryl sulfatase, a lysosomal alpha-mannosidase or a galactocerebrosidase, may in particular comprise a combination of one or more of the above-mentioned compounds. A suitable example of such a composition may be one which besides the polypeptide of interest comprises Na.sub.2HPO.sub.4, glycine and mannitol. The pH of the composition and the concentration of the different compounds may be as described above. Hence said composition may in one embodiment comprise 0.5-15 mM Na.sub.2HPQ.sub.4, 1-200 mM glycine, 50-1000 mM mannitol and a pH in the range of 7.5-8.5. Any combination of the above mentioned concentrations of compounds and pH are encompassed by the present invention. A specific example of a suitable combination of other compounds and pH in the composition comprising a polypeptide of interest is one which comprises 3.67 mM Na.sub.2HPO.sub.4, 27 mM glycine, 250 mM mannitol and has a pH in the range of 7.7 to 7.9.
[0123] Other examples of suitable compositions include, but are not limited to any of the following:
[0124] 1.84 mM Na.sub.2HPO.sub.4, 13.5 mM glycine, 125 mM mannitol and pH in the range of 7.7 to 7.9.
[0125] 2.45 mM Na.sub.2HPO.sub.4, 18 mM glycine, 167 mM mannitol and pH in the range of 7.7 to 7.9.
[0126] 5.51 mM Na.sub.2HPO.sub.4, 40.5 mM glycine, 375 mM mannitol and pH in the range of 7.7 to 7.9.
[0127] 7.34 mM Na.sub.2HPO.sub.4, 54 mM glycine, 500 mM mannitol and pH in the range of 7.7 to 7.9.
[0128] 3.67 mM Na.sub.2HPO.sub.4, 27 mM glycine, 220 mM mannitol, 30 mM sucrose and pH in the range of 7.7 to 7.9.
[0129] 3.67 mM Na.sub.2HPO.sub.4, 245 mM mannitol, 32 mM sucrose and pH in the range of 7.7 to 7.9.
[0130] 3.67 mM Na.sub.2HPO.sub.4, 27 mM L-serine, 2.50 mM mannitol and pH in the range of 7.7 to 7.9.
[0131] 10 mM TRIS-HCl, 27 mM glycine, 250 mM mannitol and pH in the range of 7.7 to 7.9.
[0132] 3.67 mM NaCitrat, 27 mM glycine, 250 mM mannitol and pH in the range of 7.7 to 7.9.
[0133] 3.67 mM Na.sub.2HPO.sub.4, 27 mM glycine, 220 mM mannitol, 29 mM sucrose, 0.1% (w/v) Tween 80 and pH in the range of 7.7 to 7.9.
[0134] 3.67 mM Na.sub.2HPO.sub.4, 27 mM glycine, 220 mM mannitol, 29 mM sucrose, 0.1% (w/v) Tween 80 and pH in the range of 7.7 to 7.9.
[0135] The composition comprising a polypeptide of interest may in particular be used for therapeutic applications in mammals. Thus the composition comprising a polypeptide of interest may in particular be isotonic with regard to the tissue of mammals, e.g. it may in particular have an osmolality in the range of 200-400 mOsm/kg, such as in the range of 250-350 mOsm/kg or in the range of 275-325 rnOsm/kg or in the range of 295-305 mOsm/kg, such as 295 mOsm/kg or 300 mOsm/kg or 305 mOsm/kg.
[0136] Method of Concentrating a Polypeptide of Interest
[0137] The method of the present invention comprises the steps of a) centrifugation and/or filtration of a composition comprising a polypeptide of interest and b) concentrating the composition from step a). The inventors of the present invention have found that by centrifugation and/or filtrating a composition comprising a polypeptide of interest prior to concentrating said composition it is possible to obtain a composition comprising a highly concentrated polypeptide of interest without any or with at least only few aggregates of the polypeptide of interest. Furthermore, it is generally an advantage for therapeutic applications of a polypeptide that the amount of polypeptide aggregates is reduced, e.g. as they may increase the risk of eliciting an immune response towards the polypeptide.
[0138] For administration of a polypeptide subcutaneously it is an advantage that the polypeptide composition has a high activity in a small volume as only small volumes can be injected subcutaneously.
[0139] Proteins or polypeptides may in general form aggregates when they are concentrated. Thus it is an advantage that when the method of the present invention is used to concentrate a polypeptide of interest it does not cause a high rate of polypeptide aggregate formation, As shown in the examples the amount of PBGD aggregates in the composition obtained by the concentration method of the present invention is similar to that of a non-concentrated PBGD composition.
[0140] In a particular embodiment step a) of the method is performed prior to step b).
[0141] Step a) Centrifugation and/or Filtration
[0142] The inventors of the present invention have found that prior to concentrating a composition comprising a polypeptide of interest it is an advantage to pre-treat the composition by centrifugation and/or filtration of the composition as by this pre-treatment many or most of the polypeptide aggregates are removed.
[0143] When the concentration of the composition in step b) is performed by a method which relies on the use of a filter or membrane, such as ultrafiltration, the presence of aggregates may block the filter or membrane so that small molecules and liquid are not able to cross the filter or membrane. This may decrease the speed by which the composition is concentrated and/or completely block any further concentration.
[0144] Hence for this type of concentration the pre-treatment according to step a) is an advantage as removal of the aggregates makes it possible to obtain compositions of a polypeptide of interest which are more concentrated than if said composition were not been pre-treated.
[0145] When the concentration of the composition in step b) is performed by a method which is based on the removal of water, such as freeze-drying or evaporation, the pre-treatment in step a) has the advantage that it reduces the amount of aggregates present in the concentrated composition.
[0146] Step a) may be performed by one of the following three alternatives:
[0147] Centrifugation,
[0148] Filtration, or
[0149] Centrifugation and filtration.
[0150] If step a) comprises both centrifugation and filtration it is an advantage to perform the centrifugation prior to the filtration as the inventors of the present invention have found that the centrifugation removes most of large aggregates and the filtration subsequently removes the remaining smaller aggregates.
[0151] Centrifugation
[0152] To be able to remove the aggregates the composition comprising a polypeptide of interest may be centrifuged at a force in the range of 1500-3000 g, such as in the range of 1800-2500 g, or in the range of 2000-2300 g.
[0153] Typically the composition may be centrifuged for 10-60 minutes, such as for 15-50 minutes or for 20-40 minutes.
[0154] As the temperature may affect the stability of the polypeptide of interest the centrifugation may be performed at a temperature in the range of 2-20.degree. C., such as from 3-15.degree. C. or in the range of 3-10.degree. C., or in the range of 3-8.degree. C., such as at 4.degree. C. or 5.degree. C. or 6.degree. C.
[0155] The centrifugation results in that the polypeptide of interest aggregates sediment, i.e. they form a pellet, while the individual polypeptide of interest molecules stays in the solution. So it is the supernatant of the centrifuged composition which is subsequently used in the method of the present invention.
[0156] Filtration
[0157] The composition comprising a polypeptide of interest may be filtered through a filter having a pore-size in the range of 0.20-5 .mu.m, such as in the range of 0.2-2.5 .mu.m.
[0158] Besides the pore-size of the filter also the material of which the filter is made of may affect filtration of polypeptide of interest. Examples of suitable membrane filters include but are not limited to polyethersulfone (PES), cellulose acetate, regenerated cellulose and polyvfnylidene fluoride (PVDF).
[0159] When molecules such as proteins are filtered it is usually the small molecules which are removed thus after filtration the polypeptide of interest may generally be present in the retentate. Hence it is generally the retentate from the filtration which is used in the subsequent steps of the present invention.
[0160] Step b) Concentrating
[0161] In principle any method of concentrating the polypeptide of interest composition may be used in step b) of the present invention.
[0162] Examples of such suitable methods include but are not limited to ultrafiltration and concentration by removal of water.
[0163] Ultrafiltration
[0164] Ultrafiltration is a separation method in which hydraulic pressure is used to force molecules and solvent across a membrane comprising pores of a particular size, also known as the cut-off size of value. Only molecules which have a molecular weight smaller than the cut-off value of the membrane are able to cross the membrane while those with a larger molecular weight do not cross the membrane and form the so-called retentate. The molecules present in the retentate are thereby concentrated as the solvent flows across the membrane.
[0165] In a particular embodiment the concentration of the solution or composition comprising a polypeptide of interest may be performed by Tangential flow filtration (TFF). This method is in particular useful for large-scale concentration, i.e. for concentration of solutions with a volume from one liter to several hundreds of liters. Thus this method is in particular useful for production of concentrated solutions of a polypeptide of interests on an industrial scale.
[0166] The TFF technique is based on the use of a particular apparatus which causes the solution which is to be filtrated to flow across a semi-permeable membrane; only molecules which are smaller than the membrane pores will pass through the membrane, forming the filtrate, leaving larger matter to be collected (retentate). With the TFF method two different pressures are applied; one to pump the solution into the system and to circulate it in the system (inlet pressure), and another pressure is applied over the membrane (membrane pressure) to force the small molecules and the solvent across the membrane. The inlet pressure may typically be in the range of 1-3 bar, such as between 1.5-2 bar. The membrane pressure may typically be larger than 1 bar.
[0167] The concentrated composition of a polypeptide of interest may be collected as the retentate when TFF is used to concentrate the composition.
[0168] Membranes useful for TFF may typically be made of regenerated cellulose or polyethersolufone (PES).
[0169] The pore-size of the membrane may typically have a molecular weight cut-off which is smaller than 10.000 Mw, such as in the range of 10-10.000 Mw.
[0170] In another embodiment the concentration of the composition comprising a polypeptide of interest may be performed by the use of a centrifugal device. The principle of this method is that the solution is filtrated over a membrane by the application of a centrifugal force over the membrane. Such membranes are often characterized by a molecular weight (Mw) cut-off, i.e. this is the maximum molecular size of compounds which are able to cross the membrane and compound with a molecular size larger than this will not cross the membrane. The Mw cut-off of the membranes used in the present invention may in particular be smaller than 30.000 Mw, such as between 10-30.000 Mw.
[0171] The membrane may in particular be made of polyethersulfone (PES) or regenerated cellulose.
[0172] Examples of such suitable commercial filter devices may be Centricon Plus-80 or Centricon Plus-15.
[0173] The concentration may typically be performed by centrifugation at 2000-4500 g, such as between 2500-4000 g, or between 2750-3500 g, or between 3000-3500 g, such as at 3000 g or 3100 g or 3200 g or 3300 g or 3400 g or 3500 g.
[0174] Typically the centrifugation may be run for several hours, e.g. for more than one hour, such as for 1-10 hours.
[0175] To minimize any negative effects on the stability of the polypeptide of interest the centrifugation may in particular be performed at a temperature in the range of 2-20.degree. C., such as In the range of 3-15.degree. C. or in the range of 3-10.degree. C. or in the range of 3-6.degree. C.
[0176] Concentrating by Removal of Water
[0177] The principle of concentration by removal of water is usually that all, or most, of the water is removed to obtain a solid, and then subsequently diluting or dissolving this solid in a volume of water which is less than what it was previously diluted or dissolved in. However, it may in principle be performed by just removing the necessary amount of water to obtain the desired concentration without subsequently re-diluting or re-dissolving the compound.
[0178] Examples of suitable methods of concentrating by removal of water include freeze-drying and evaporation.
[0179] Both for freeze-drying and evaporation the three most relevant parameters is the temperature, pressure and the time.
[0180] The method of freeze-drying may be comprise the following three or four steps; a freezing-phase, a primary drying phase and a secondary drying phase and optionally a step of annealing after the freezing phase. Freeze-drying may in particular be performed as described with regard to freeze-drying included as a further step of the method of the present invention.
[0181] Further Steps
[0182] The polypeptide of interest may derive from a natural source, i.e. from cells naturally expressing the polypeptide of interest, or it may in particular be expressed recombinant.
[0183] Independent of where the polypeptide of interest derives from it may have been purified before being subjected to a method of the present invention.
[0184] Such "purification" may in particular include but is not limited to removal of cell debris, removal of other proteins than polypeptide of interest and removal of other components which may be present in the source from which the polypeptide of interest is derived. Thus in a particular embodiment of the present invention the composition comprising a polypeptide of Interest comprises less than 5 w/w %, or less than 1 w/w % or less 0.5 w/w % or less than 0.1 w/w % or less than 0.05 w/w % or less than 0.01 w/w % other proteins than the polypeptide of interest.
[0185] Thus other proteins which are expressed by e.g. a host cell may be removed from the composition comprising a polypeptide of interest before it is used in a method of the present invention.
[0186] Thus in a particular embodiment the method of the present invention may comprise one or more of following steps prior to step a):
[0187] i) recombinant expression of a polypeptide of interest
[0188] ii) purification of polypeptide of interest composition by one or more steps of chromatography
[0189] iii) exchange of the formulation buffer
[0190] Recombinant expression of a polypeptide of interest may in particular be performed as described previously with regard to the polypeptide of interest.
[0191] If the polypeptide of interest is PBGD examples of suitable types of chromatography include but are not limited to affinity chromatography, Ion Exchange Chromatography (IEC) and chromatography on a hydroxyapatite column. In principle any combination of these chromatography methods may be used. The inventors of the present invention have previously found for PBGD that it is an advantage to perform at least the step of affinity chromatography and if this is combined with any of the other methods of chromatography it is an advantage to perform the step of affinity chromatography prior to the other chromatography steps (see e.g. WO 03/002731).
[0192] For the embodiment where the polypeptide of interest is PBGD examples of commercially available affinity chromatography columns include affinity coupling, group specific affinity, and metal chelate affinity columns.
[0193] The product catalogue 2001 of the company Amersham Pharmacia Biotech gives examples of affinity coupling columns, such as columns comprising immobilizing ligands, containing --NH.sub.2, and columns comprising ligands, containing primary amino groups.
[0194] Metal chelate affinity columns are specially preferred for purifying proteins via metal ion complex formation with exposed histidine groups. Example 3 of WO01/07065 describes construction of a recombinant human Porphobilinogen deaminase with a "His-Tag" (rhPBGD-His). In order to purify rhPBGD-His it is preferred to use a metal chelate affinity column, such as a column having a cobalt metal affinity resin.
[0195] Examples of other suitable methods of affinity chromatography include but are not limited to columns having porcine heparin as ligand or columns having 1-Amino-4-[[4-[[4-chloro-6-[[3 (or 4)-sulfophenyl]amino]-1,3,5-triazin-2-yl]amino]-3-sutfophenyl]amino]-9,10- -dihydro-9,10-dioxo-2-anthracenesulfonic acid, also known as Cibracon Blue 3G, as ligand and using Triazine coupling as the ligand coupling method. A commercially available example of the latter is Blue Sepharose 6 Fast Flow (FF) from Amersham Pharmacia Biotech. Accordingly, a preferred embodiment of the invention relates to the process, as described herein, wherein the affinity chromatography column of step (i) is a column using a triazine coupling as ligand coupling method, and more preferably wherein the ligand is Cibacron Blue 3G.
[0196] The term "Ion Exchange Chromatography (IEC)" should herein be understood according to the art as a column separating molecules such as proteins on the basis of their net charge at a certain pH by electrostatic binding to a charged group on the column. Ion exchange denotes the absorption of ions of one type onto a column in exchange for others which are lost into solution.
[0197] Examples of suitable IEC columns are columns such as a Q Sepharose column, a Q SP Sepharose column, or a CM Sepharose column, it may in particular be a DEAE Sepharose column.
[0198] An example of a suitable hydroxyapatite column is a ceramic hydroxyapatite column. Hydroxyapatite (Cas(PO.sub.4)3OH).sub.2 is a form of calcium phosphate that can be used for the separation and purification of proteins, enzymes, nucleic acids, viruses, and other macromolecules. Ceramic hydroxyapatite is a spherical, macroporous form of hydroxyapatite. CHT Type I (Bio-Rad) is an example of a suitable commercially available ceramic hydroxyapatite chromatography column.
[0199] In one embodiment the method of the present invention may comprise the following steps prior to step a):
[0200] i) recombinant expression of PBGD
[0201] ii) subjecting the PBGD composition from step i) to affinity chromatography
[0202] iii) subjecting the PBGD composition of step ii) to ion exchange chromatography
[0203] In a further embodiment the method of the present invention may comprise the following steps prior to step a):
[0204] i) recombinant expression of PBGD
[0205] ii) subjecting the PBGD composition from step i) to affinity chromatography
[0206] iii) subjecting the PBGD composition from step ii) to ion exchange chromatography
[0207] iv) subjecting the PBGD composition from step iii) to a hydroxyapatite column
[0208] Both of these methods may optionally include a further step of dilution of diafiltration of the PBGD composition obtained from step ii). Thus said step should be after step ii) and before iii), i.e. a step iia). Step iia) has the purpose of reducing the concentration of salts to suitable conductivity, e.g. <10 mS/cm. This may in particular be relevant if DEAE Sepharose is used as resin in the ion exchange chromatography step, i.e. step iii), as this may facilitate binding of the captured PBGD to the DEAE Sepharose resin. Dilution may be obtained by addition of purified water directly or by ultrafiltration against purified water.
[0209] The recombinant expression of PBGD, step i) may be performed by any of the methods described above.
[0210] Examples of suitable affinity chromatography columns in step ii) may be any of the above mentioned.
[0211] Examples of suitable methods of performing ion exchange chromatography in step iii) may be any of the above mentioned.
[0212] Examples of suitable hydroxyapatite chromatography columns in step iv) may be any of the above mentioned.
[0213] In a particular embodiment the affinity chromatography column may be a column using a triazine coupling as ligand coupling method, and in particular such a method wherein the ligand is Cibracon Blue 3G. This may in particular be a Blue Sepharose 6 Fast Flow column, and the ion exchange chromatography column may be DEAE Sepharose column, and in the embodiment wherein the method also comprises a step iv) this column may in particular be a ceramic hydroxyapatite column.
[0214] The method of the present invention may also comprise further steps after step b) of the method. Such steps include but are not limited to one or more of the following:
[0215] freeze-drying the composition comprising a concentrated polypeptide of interest,
[0216] changing the buffer of the composition comprising a concentrated polypeptide of interest,
[0217] sterile filtration of the composition comprising a concentrated polypeptide of interest
[0218] evaporation
[0219] Different freeze-driers, volume of solutions to be freeze-dried and other parameters may be used in the method of the present invention. An example of a suitable freeze-dryer includes but is not limited to a Lyostar (FTM-systems) freeze-drier as used the examples of the present invention, where the solutions comprising a concentrated polypeptide of interest, i.e. in this case PBGD, were filled in 2 and 6 ml injection glass vials (type 1) and stoppered with rubber stoppers (chlorobutyl). The freeze-drying may be performed by the following three steps;
[0220] i) freezing,
[0221] ii) primary drying, and
[0222] iii) secondary drying.
[0223] Step i) freezing may in particular be performed by first loading a sample in ambient temperature and cooling it to 0.degree. C. and keeping it at 0.degree. C. for 30 minutes, before lowering the temperature by 1.degree. C. per minute to -40.degree. C. and keeping it at -40.degree. C. for 30 minutes.
[0224] Step ii) primary drying may in particular be performed by drawing the vacuum pressure 126 mTorr, raising the temperature by 1.degree. C. per minute to 0.degree. C. and keeping the sample at 0.degree. C. for 360 minutes
[0225] Step iii) secondary drying may in particular be performed by drawing the full vacuum simultaneously with raising the temperature by 0.5.degree. C. per minute to +30.degree. C. and keeping the sample at +30.degree. C. for 360 minutes.
[0226] After the secondary drying the sample may further be closed under vacuum or closed after filling with nitrogen.
[0227] An example of a suitable freeze-drying method includes the one described in the examples of the present invention.
[0228] The freeze-drying may in further embodiment comprise an annealing step prior to the primary drying phase. The inventors of the present invention have found that inclusion of an annealing step in the freeze-drying method improves the visual appearance, as visualized by fewer cracks, and/or results in a shorter reconstitution time of the freeze-dried product compared to when the same method of freeze-drying is used but without the annealing step. It is an advantage that the time for reconstitution of a freeze-dried product is reduced, especially if it is to be used as a pharmaceutical which is administered as a solution. An improved visual appearance is usually also regarded as an advantage for most products.
[0229] Thus the freeze-drying may comprise the following steps:
[0230] i) freezing
[0231] ii) annealing
[0232] iii) primary drying
[0233] iv) secondary drying.
[0234] The freezing, primary drying and secondary drying steps may in particular be performed as described above. The annealing step, i.e. step ii) may in particular be performed by after 30 minutes of freezing, raising the temperature at e.g. a rate of 2.degree. C. per minute to -10.degree. C. or -20.degree. C. and keeping this temperature for 120 or 420 minutes and then lowering the temperature e.g. a rate of 2.degree. C. per minute to -40.degree. C. at which temperature the sample may be kept at 60-90 minutes before start of the step of primary drying.
[0235] Changing the buffer of the composition comprising a concentrated polypeptide of interest may in particular be performed by a) diluting, e.g. 5-15 times, the composition comprising a concentrated polypeptide of interest in a buffer or formulation, b) concentrating the diluted composition again and performing the steps a) and b) a sufficient number of times so that amount of the excipients in the buffer or formulation present in the composition before these steps constitute less than e.g. 5 v/v % or less than 1 v/v % of excipients in the buffer or formulation present in said composition after said steps were performed.
[0236] In particular the composition comprising a polypeptide of interest obtained from step b) of the present invention may in particular further comprise a step of sterile filtration of said composition and/or a step of freeze-drying the composition.
[0237] Sterile filtration is generally performed by filtration of the composition through a filter with a pore-size of 0.22 .mu.m or 0.20 .mu.m. Freeze-drying may in particular be performed as described above.
[0238] The present invention also relates to a freeze-dried composition obtained by a method of the present invention.
[0239] Subcutaneous Injection
[0240] The present invention also relates to the use of a composition comprising in the range of 50-300 mg/ml polypeptide of interest for the manufacture of a medicament for subcutaneous injection into a mammal.
[0241] The polypeptide of interest may be any polypeptide of interest according to the present invention, including but not limited to PBGD, aryl sulfatase A, lysosomal alpha-mannosidase and galactocerebrosidase.
[0242] The term subcutaneous is often shortened to s.c. and the two terms may be used interchangeably in the context of the present invention.
[0243] When injection is performed subcutaneously it is usually not possible to inject more than 1.5 mL due to physiologically restraints.
[0244] As the patient usually needs a certain amount of the particular polypeptide of interest there is a correlation between the volume of the composition comprising a polypeptide of interest which needs to be administered to the patient and of the concentration of polypeptide of interest in said composition.
[0245] It is therefore an advantage of the present invention that the composition comprising a polypeptide of interest comprises a high concentration of the polypeptide of interest and that this high concentration of the polypeptide of interest can be obtained without, the formation of large amounts of polypeptide aggregates. The use of such concentrated polypeptide of interest compositions makes it possible to inject a smaller volume of said composition and at the same time ensure that the patient receives an adequate amount of the polypeptide of interest; thus making it easier to administer the polypeptide of interest subcutaneously.
[0246] The above-mentioned composition comprising a polypeptide of interest may in particular comprise between 75-250 mg/ml, such as between 75-200 mg/ml or between 75-150 mg/ml or between 100-150 mg/ml or between 100-125 mg/ml or between 125-150 mg/ml of polypeptide of interest.
[0247] As described above, the volume of composition, comprising a polypeptide of interest, which is necessary to inject into the patient, to ensure that the patient receives an adequate amount of the polypeptide of interest, correlates with the concentration of the polypeptide of interest, in said composition.
[0248] Thus the volume of such a composition will generally be adjusted according to the concentration of the polypeptide of interest in the composition. However, the volume may generally be in the range of 0.1-1.5 ml, such as in the range of 0.1-1.5 ml or in the range of 0.5-1.5 ml or in the range of 0.5-1.5 ml or in the range of 0.75-1.5 ml or in the range of 0.75-1.5 ml or in the range of 1-1.5 ml or in the range of 1-1.5 ml.
[0249] The amount of polypeptide of interest which it is relevant to administer to a patient generally depends on the weight of the individual and the particular polypeptide of interest.
[0250] In one embodiment the present invention relates to a method of treating a mammal for Acute Intermittent Porphyria comprising subcutaneous injection of a composition of 50-300 mg/ml PBGD.
[0251] Administration of PBGD may in particular be useful for the treatment of Acute Intermittent Porphyria. However, It is contemplated that administration of PBGD also may be useful for the treatment of other porphyrias, such as Hereditary coproporphyria or Variegata porphyria. Porphyria is a term used to collectively describe a number of diseases caused by different deficiencies in the heme biosynthetic pathway. Hence it is contemplated that administration of PBGD, e.g. in combination with other therapeutics, to a patient suffering from any type of porphyria may help to increase the overall turnover of the different Intermediates in the pathway. For example Meissner P N et al., 1986, European Journal of Clinical investigation, vol. 16, 257-261; Hift R J et al., 1997, S. Afr. Med. J., vol. 87, 718-27 and Meissner P et al., 1993, J. Clin. Invest., vol. 91, 1436-44 describe accumulation of ALA and PBG in Hereditary coproporhyria and Variegata porphyria. In these diseases, the accumulation of ALA and PBG results from enzymatic defects that are located four and five steps downstream form the conversion of ALA to PBG, respectively. In the two most recent papers it is described how the porphyrinogen which accumulates in patients with Variegata porphyria is capable of inhibiting PBG-deaminase.
[0252] In a further embodiment the present invention relates to a method of treating a mammal for metachromatic leukodystrophy comprising subcutaneous injection of a composition of 50-300 mg/ml aryl sulfatase A.
[0253] Metachromatic leukodystrophy (MLD) is caused by an autosomal recessive genetic defect in the lysosomal enzyme Arylsulfatase A (ASA), resulting in a progressive breakdown of membranes of the myelin sheath (demyelination) and accumulation of galactosyl sulphatide (cerebroside sulphate) in the white matter of both the central nervous system (CNS) and the peripheral nervous system. In histologic preparations, galactosyl sulphatide forms spherical granular masses that stain metachromatically. Galactosyl sulphatide also accumulates within the kidney, gallbladder, and certain other visceral organs and is excreted in excessive amounts in the urine.
[0254] Galactosyl sulphatide is normally metabolized by the hydrolysis of 3-O-sulphate linkage to form galactocerebroside through the combined action of the lysosomal enzyme arylsulfatase A (EC 3.1.6.8) (Austin et al. Biochem J. 1964, 93, 15 C-17 C) and a sphingolipid activator protein called saposin B. A profound deficiency of arylsulfatase A occurs in all tissues from patients with the late infantile, juvenile, and adult forms of MLD (see below). In the following, the arylsulfatase A protein will be termed "ASA". A profound deficiency of ASA occurs in all tissues from patients with MLD.
[0255] In yet another embodiment the present invention relates to a method of treating a mammal for the lysosomal storage disorder alpha-mannosidosis comprising subcutaneous injection of a composition of 50-300 mg/ml lysosomal alpha-mannosidase.
[0256] Alpha-mannosidosis is a recessive, autosomal disease that occurs worldwide with a frequency of between 1/1,000,000 and 1/500,000. Mannosidosis is found in all ethnic groups in Europe, America, Africa and also Asia. It is detected in all countries with a good diagnostic service for lysosomal storage disorders, at a similar frequency. They are born apparently healthy; however the symptoms of the diseases are progressive. Alpha-mannosidosis displays clinical heterogeneity, ranging from very serious to very mild forms. Typical clinical symptoms are: mental retardation, skeletal changes, impaired-immune system resulting in recurrent infections, hearing impairment and often the disease is associated with a typical facial characteristics such as a coarse face, a prominent forehead, a flattened nasal bridge, a small nose, and a broad mouth. In the most severe cases (mannosidosis type I) the children suffer from hepatosplenomegaly, and they die during the first years of life. Possibly this early death is caused by severe infections due to the immunodeficiency caused by the disease. In milder cases (mannosidosis type 2) the patients usually reach adult age. The skeletal weaknesses of the patients result in the needs of wheeling chairs at age 20 to 40. The disease causes a diffuse dysfunction of the brain often resulting in weak mental performances that excludes anything but the most basic skills of simple reading and writing. These problems associated with hearing inabilities and other clinical manifestations preclude the patient from an independent life, the consequence being that lifelong caretaking is needed.
[0257] In yet another embodiment the present invention relates to a method of treating a mammal for Krabbe disease comprising subcutaneous injection of a composition of 50-300 mg/ml galactosylcerebrosidase.
[0258] In humans a deficiency in the GALC enzyme results in an autosomal inherited genetic Lysosomal Storage disease known as Krabbe disease or Globoid Cell Leukodystrophy. The enzyme is generally expressed in the testis, kidneys, placenta, liver and brain of human beings and a deficiency in the GALC enzyme generally results in a disorder in the myelin metabolism and in the central and peripheral nervous systems (the CHS and PNS, respectively).
[0259] Krabbe disease has been observed in humans of any age, nationality and sex.
[0260] It should be noted that embodiments and features described in the context of one of the aspects of the present invention also apply to the other aspects of the invention. In particular, all of the embodiments described for the composition comprising a polypeptide of interest, such as the presence of further compounds, buffers and pH also apply to the composition comprising a polypeptide of interest used in the present applications.
[0261] When an object according to the present invention or one of its features or characteristics is referred to in singular this also refers to the object or its features or characteristics in plural. As an example, when referring to "a polypeptide" it is to be understood as referring to one or more polypeptides.
[0262] Throughout the present specification the word "comprise", or variations such as "comprises" or "comprising", will be understood to imply the inclusion of a stated element, integer or step, or group of elements, integers or steps, but not the exclusion of any other element, integer or step, or group of elements, integers or steps.
[0263] All patent and non-patent references cited in the present application, are hereby incorporated by reference in their entirety.
[0264] The invention will now be described in further details in the following non-limiting
[0265] Experimental sections.
EXPERIMENTAL
[0266] Materials
[0267] rhPBGD
[0268] The rhPBGD used in the following experiments were obtained according to process 2 in example 1 of WO 03/002731, where process 2 is the process which includes step IV, i.e. the ceramic hydroxyapatite chromatography step.
[0269] Formulation Buffer
[0270] The recombinant and purified rhPBGD was present in the following aqueous formulation buffer:
[0271] 3.67 mM Na.sub.2HPO.sub.4
[0272] 27 mM Glycine
[0273] 250 mM Mannitol
[0274] and a pH of 7.9
[0275] The formulation buffer was then sterile-filtered through a 0.22 .mu.m filter.
[0276] Methods
[0277] Freezer-Drying
[0278] The freeze-drying of the purified rhPBGD solutions were performed in a Lyostar (FTM-systems) freeze-drier according to the following schedule:
TABLE-US-00002 Freezing phase 0.degree. C. 30 min 760 Torr 0.degree. C. to -40.degree. C. 1.degree. C./min 760 Torr -40.degree. C. 30 min 760 Torr Primary drying -40.degree. C. to 0.degree. C. 1.degree. C./min 169 mTorr 0.degree. C. 240 min 169 mTorr Secondary drying 0.degree. C. to 30.degree. C. 10.degree. C./60 min, 20 mTorr 180 min 30.degree. C. 720 min 20 mTorr
[0279] Visual Observation (Clarity and Color)
[0280] The liquid was visually studied with respect to color, clarity and precipitates according to the scheme below.
[0281] Color: 1: No color; 2: Slightly yellow; 3: Yellow
[0282] Clarity: 1: Clear; 2: Slightly turbid; 3: Turbid
[0283] Other remarks: Other observations from the operator were in some instances included here (e.g. precipitates, undissolved material etc.)
[0284] pH-Measurement
[0285] The pH-meter (Metrohm 691 pH Meter) and electrode (combined LL pH electrode) were calibrated with 3 standard reference solutions (Merck) in the range 4.00 to 9.00. The liquid was finally analyzed.
[0286] Protein Concentration
[0287] Protein concentration in extract, in-process samples, bulk drug substance and final product was determined by a method that utilizes principles of the reduction of Cu2+ to Cu+ by protein in an alkaline medium (the Biuret reaction). The Cu+ ions were then reacted with a reagent containing bicinchoninic acid resulting in a highly sensitive and selective colorimetric detection.
[0288] Purity
[0289] Recombinant human Porphobilinogen Deaminase (rhPBGD) and rhPBGD variants were separated according to their ability to adsorb and desorb to silica based stationary media depending on the percentage of organic modifier (acetonitrile) in the mobile phase.
[0290] rhPBGD Activity
[0291] Porphobilinogen deaminase (PBGD) catalyzes the addition of 4 molecules of porphobilinogen (PBG) to form a linear tetramer, preuroporphyrinogen, which is released from the enzyme and in vivo circularized to uroporphyrinogen III by the action of Uroporphyrinogen III synthase, Preuroporphyrinogen can be chemically oxidized with benzoquinone to form uroporphyrin, which absorbs light at 405 nm.
[0292] The analyses were performed on one single vial on each test occasion. For the determination of rhPBGD activity and protein concentration the tests were performed in duplicate and triplicate respectively, for each vial.
[0293] Osmolality
[0294] One vial of freeze-dried rhPBGD was re-suspended in 1.00 ml MilliQ-water. The vial of frozen aqueous solution of rhPBGD was thawed. The osmometer (Vapro osmometer) was calibrated with 3 standard solutions in the range 100-1000 mOsm/kg (100, 290, 1000 mOsm/kg). The liquid was then analyzed.
Example 1
[0295] Concentrating with Centrifugal Filter Devices
[0296] Frozen PBGD-bulk solution (7 mg/mL rhPBGD, 3.67 mM Na.sub.2HPO.sub.4, 27 mM glycine, 250 mM Mannitol, pH 7.9) was thawed in a water-bath at 20.degree. C., centrifuged at 3200 g for 10 min and thereafter sterile-filtrated by 0.20 .mu.m-PES filters (Nalgene Polyethersulfone filters). The PBGD-bulk solution was concentrated to 100 mg/ml by running the Centrifugal Filter Devices Centricon Plus-80 (Mw cut-off 30000) and Centricon Plus-15 (Mw cut-off 30000) at 3200 g for several hours. The concentrated solution, i.e. the retentate, was sterile-filtrated by 0.22 .mu.m-filters (Millex G V) and finally a part of this solution was diluted with sterile formulation buffer to get 50 mg/ml. The 5 mg/ml-solution was prepared by directly diluting the recombinant and purified hPBGD with sterile formulation buffer.
[0297] The 5 mg/mL, 50 mg/mL and 100 mg/mL rhPBGD were then freeze-dried as described above. Several vials of each the above-mentioned freeze-dried rhPBGD solutions with 5, 50 and 100 mg/mL rhPBGD and of the aqueous 5 mg/mL rhPBGD solution were stored at 40.degree. C..+-.2.degree. C., 75%.+-.5% relative humidity (RH). The vials were stored protected from light in a well-sealed secondary package (paper box).
[0298] At the indicated time points (i.e. time of storage) a vial of each freeze-dried samples were re-suspended in 1.00 mL Millipore water.
[0299] Each of the re-suspended vials and the aqueous via of rhPBGd were then visually observed with regard to colour, clarity and precipitates, and the pH, protein concentration, purity and rhPBGD activity were measured as described above.
[0300] The results are given in the following tables 1-4;
TABLE-US-00003 TABLE 1 Freeze-dried product, 5 mg/mL Specific Time-point Activity Concentration activity Purity Visual (month) (U/ml) (mg/ML) (U/mg) (%) observation 0 93.2 4.3 21.5 99.6 Colour: 1, clarity: 1 0.5 81.0 5.2 15.6 ND Colour: 1, clarity: 1 1 76.6 5.9 13.1 99.9 Colour: 1, clarity: 1 1.5 87.0 5.5 15.9 99.7 Colour: 1, clarity: 1 2 53.3 4.7 11.4 99.6 Colour: 1, clarity: 1 3 50.8 4.8 10.7 99.6 Colour: 1, clarity: 1 6 34.3 5.3 6.5 99.6 Colour: 1 clarity: 1
TABLE-US-00004 TABLE 2 freeze-dried product; 50 mg/ml Specific Time-point Activity Concentration activity Purity Visual (month) (U/ml) (mg/ML) (U/mg) (%) observation 0 888 41.4 21.5 99.1 Colour: 2, clarity: 1 0.5 842 50.6 16.6 ND Colour: 2, clarity: 1 1 746 50.6 14.8 100 Colour: 1, clarity: 1 2 640 52.9 12.1 100 Colour: 2. clarity: 1 3 634 49.0 12.9 100 Colour: 2, clarity: 1 6 422 43.0 9.8 100 Colour: 2, clarity: I
TABLE-US-00005 TABLE 3 Freeze-dried product; 100 mg/ml Specific Time-point Activity Concentration activity Purity Visual (month) (U/ml) (mg/ML) (U/mg) (%) observation 0 1944 83.7 23.2 99.1 Colour: 3, clarity: 1 1 1470 98.7 14.9 100 Colour: 3, clarity: 1 2 1282 94.8 13.5 100 Colour: 3, clarity: 1 3 1253 82.6 15.2 100 Colour: 3, clarity: 1 6 739 75.5 9.8 100 Colour: 3, clarity: 1
TABLE-US-00006 TABLE 4 Aqueous product; 5 mg/ml Specific Time-point Activity Concentration activity Purity Visual (month) (U/ml) (mg/ML) (U/mg) (%) observation 0 95.6 4.0 23.7 99.1 Colour: 1, clarity: 1 0.5 48.1 5.4 8.9 ND Colour: 1, clarity: 1 1 28.6 5.9 4.8 96.1 Colour: 1, clarity: 1 1.5 12.3 5.6 2.2 91.4 Colour: 1, clarity: 1 2 4.5 4.4 1.0 90.7 Colour: 1, clarity: 1 3 7.1 3.1 2.3 87.3 Colour: 2, clarity: 2 6 4.4 2.1 2.1 58.1 Colour: 2, clarity: 2
Example 2
[0301] Concentrating a rhPBGD Composition by Centrifugal Filter Devices
[0302] Frozen PBGD-butk solution (7 mg/mL rhPBGD, 3.67 mM Na.sub.2HPO.sub.4, 27 mM glycine, 250 mM Mannitol, pH 7.9) was thawed in a water-bath at 20.degree. C., centrifuged at 3200 g for 10 min and thereafter sterile-filtrated by 0.20 .mu.m-PES filters (Nalgene Polyethersulfone filters), The PB GD-bulk solution was concentrated to 100 mg/ml by running the Centrifugal Filter Devices Centricon Plus-80 (Mw cut-off 30000) and Centricon Plus-15 (Mw cut-off 30000) at 3200 g for several hours. The concentrated solution, i.e. the retentate, was sterile-filtered by 0.22 .mu.m-filters (Millex GV) and diluted with sterile filtered formulation buffer (see above) to get solutions of lower concentrations. A fraction in volume of each concentration was freeze-dried as described above.
[0303] The different concentrations of freeze-dried rhPBGD and aqueous solution of rhPBGD were stored at 5.degree. C..+-.3.degree. C. or at -20.degree. C..+-.5.degree. C. (ambient relative humidity (RH)). All vials were stored protected from light in a well-sealed secondary package (paper box).
[0304] At the indicated time points (i.e. time of storage) a vial of each freeze-dried samples were resuspended in 1.00 mL Millipore water and then tested together with the aqueous solution of rhPBGD by visually observing the colour, clarity and precipitates, and by measuring pH, protein concentration, purity, osmolality and rhPBGD activity.
[0305] The results are given in the following tables 5-19:
TABLE-US-00007 TABLE 5 Aqueous product; 11 mg/ml; Storage temp.: +5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) PH kg) Aggregates 0 10.9 255.0 23.4 100.0 7.80 290 Colour: 2 Clarity: 1 Clear None/few 1 9.5 216.8 22.8 100.0 7.81 305 Colour: 2 Clarity: 1 Clear None/few 2 10.9 230.2 21.1 98.0 7.80 300 Colour: 2 Clarity: 1 Clear None/few 3 11.2 226.6 20.2 100.0 7.76 290 Colour: 2 Clarity: 1 Clear Few 6 14.7 271.1 18.4 100.0 7.77 300 Colour:2 Clarity: 1 Clear Several
TABLE-US-00008 TABLE 6 Aqueous product: 11 mg/ml; Storage temp: -20.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) PH kg) Aggregates 0 10.4 236.1 22.6 100 7.80 290 Colour: 2 Clarity: 1 Clear None 1 11.7 270.3 23.1 100 7.81 302 Colour: 2 Clarity: 1 Clear None 2 ND ND ND ND ND ND ND 3 12.4 247.7 20.0 100 7.77 288 Colour: 2 Clarity: 1 Clear None 6 13.4 291.5 21.8 100 7.77 301 Colour: 2 Clarity: 1 Clear None
TABLE-US-00009 TABLE 7 Freeze-dried product, 11 mg/ml; Storage temp.: +5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3; Time- conc. Activ- ity Puri- lality Clarity 1-3; point (mg/ ity (U/ ty (mOsm/ Solution; (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 10.9 230.0 21.2 100.0 7.80 290 Colour: 2 Clarity: 1 Clear None 1 ND ND ND ND ND ND ND 2 ND ND ND ND ND ND ND 3 13.3 269.3 20.2 100.0 7.74 282 Colour: 2 Clarity: 1 Clear None 6 14.7 237.9 16.2 100.0 7.76 290 Colour: 2 Clarity: 1 Clear None
TABLE-US-00010 TABLE 8 Aqueous product, 17 mg/ml; Storage temp.: +5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 18.0 471.0 26.1 100.0 7.80 298 Colour: 2 Clarity: 1 Clear None/few 1 17.5 360.4 20.6 100.0 7.81 311 Colour: 2 Clarity: 1 Clear None/few 2 18.3 397.0 21.7 100.0 7.83 302 Colour: 2 Clarity: 1 Clear None/few 3 16.6 376.5 22.7 100.0 7.77 294 Colour: 2 Clarity: 1 Clear Few 6 16.0 257.3 16.1 100.0 7.76 305 Colour: 2 Clarity: 1 Clear Several
TABLE-US-00011 TABLE 9 Aqueous product, 17 mg/ml; Storage temp.: -20.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) PH kg) Aggregates 0 17.9 411.6 23.0 100.0 7.80 298 Colour: 2 Clarity: 1 Clear None 1 17.4 439.5 25.3 100.0 7.80 310 Colour: 2 Clarity: 1 Clear None 2 ND ND ND ND ND ND ND 3 16.4 389.4 23.7 100.0 7.77 292 Colour: 2 Clarity: 1 Clear None 6 18.0 373.8 20.8 100.0 7.76 305 Colour: 2 Clarity: 1 Clear None
TABLE-US-00012 TABLE 10 Freeze-dried product, 17 mg/ml; Storage temp.: 5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) PH kg) Aggregates 0 16.9 380.1 22.5 100.0 7.80 298 Colour: 2 Clarity: 1 Clear None 1 ND ND ND ND ND ND ND 2 ND ND ND ND ND ND ND 3 15.6 391.9 25.1 100.0 7.76 285 Colour: 2 Clarity: 1 Clear None 6 16.6 341.3 20.6 100.0 7.75 297 Colour: 2 Clarity: 1 Clear None
TABLE-US-00013 TABLE 11 Aqueous product; 36 mg/ml; Storage temp.: +5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 36.0 844.4 23.4 100.0 7.81 305 Colour: 2 Clarity: 1 Clear None/few 1 35.5 778.1 21.9 100.0 7.82 314 Colour: 2 Clarity: 1 Clear None/few 2 35.4 798.5 22.6 100.0 7.81 310 Colour: 2 Clarity: 1 Clear None/few 3 28.9 687.9 23.8 100.0 7.77 303 Colour: 2 Clarity: 1 Clear Few 6 37.2 537.3 14.4 100.0 7.77 312 Colour: 2 Clarity: 1 Clear Several
TABLE-US-00014 TABLE 12 Aqueous product, 36 mg/ml; Storage temp.: -20.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point. (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 34.0 853.4 25.1 100.0 7.81 305 Colour: 2 Clarity: 1 Clear None 1 38.0 853.6 22.5 100.0 7.83 321 Colour: 2 Clarity: 1 Clear None 2 ND ND ND ND ND ND ND 3 31.6 776.3 24.6 100.0 7.76 299 Colour: 2 Clarity: 1 Clear None 6 30.6 543.8 17.8 100.0 7.75 311 Colour: 2 Clarity: 1 Clear None
TABLE-US-00015 TABLE 13 Freeze-dried product, 36 mg/ml; Storage temp.: 5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 29.5 657.0 22.3 100.0 7.81 305 Colour: 2 Clarity: 1 Clear None 1 ND ND ND ND ND ND ND 2 ND ND ND ND ND ND ND 3 28.7 747.6 26.0 100.0 7.75 290 Colour: 2 Clarity: 1 Clear None 6 29.8 579.3 19.4 100.0 7.76 300 Colour: 2 Clarity: 1 Clear None
TABLE-US-00016 TABLE 14 Aqueous product, 50 mg/ml; Storage temp.: 5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 46.2 780.9 16.9 96.3 7.59 317 Colour: 3 Clarity: 1 Slightly opalescent None 1 47.9 915 19.1 90 7.58 305 Colour: 3 Clarity: 1 Slightly opalescent None 2 47.2 898.3 19.0 100 7.60 318 Colour: 3 Clarity: 1 Slightly opalescent None 3 60.8 1102.6 18.1 100 7.72 314 Colour: 3 Clarity: 1 Clear None 6 62.5 902.8 14.4 100 7.60 331 Colour: 3 Clarity: 2 Clear None 9 41.7 618.5 14.8 100 7.60 336 Colour: 3 Clarity: 2 Clear None 12 50.2 540.8 10.8 97.5 7.60 329 Colour: 3 Clarity: 2 Clear None
TABLE-US-00017 TABLE 15 Aqueous product, 50 mg/ml; Storage temp.: -20.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) PH kg) Aggregates 0 46.2 780.9 16.9 96.3 7.59 317 Colour: 3 Clarity: 1 Slightly opalescent None 1 47.2 899.1 19.0 93.7 7.58 313 Colour: 3 Clarity: 1 Slightly opalescent None 2 53 1222.7 23.1 100.0 7.60 315 Colour: 3 Clarity: 1 Slightly opalescent None 3 61.2 1336.2 21.8 100.0 7.75 320 Colour: 3 Clarity: 1 Slightly opalescent None 6 52.2 1001.3 19.2 100.0 7.60 321 Colour: 3 Clarity: 1 Slightly opalescent None 12 50.4 887.9 17.6 100.0 7.60 320 Colour: 3 Clarity: 1 Slightly opalescent None
TABLE-US-00018 TABLE 16 Freeze-dried product, 50 mg/ml; Storage temp.: 5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Cake/solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 42.7 759.4 17.8 100.0 7.58 292 Colour: 3 Clarity: 1 Cake: yellow, some cracks Solution: Clear None 1 42.6 840.4 19.7 63.1 7.58 293 Colour: 3 Clarity: 1 Cake: yellow, some cracks Solution: Clear None 2 42.1 937.0 22.3 100.0 7.60 292 Colour: 3 Clarity: 1 Cake: yellow, some cracks Solution: Clear None 3 47.4 1014.7 21.4 100.0 7.75 291 Colour: 3 Clarity: 1 Cake: yellow, some cracks Solution: Clear None 6 49.0 876.5 17.9 100.0 7.60 304 Colour: 3 Clarity: 1 Cake: yellow, some cracks Solution: Clear None 12 51.3 945.0 18.4 100.0 7.60 308 Colour: 3 Clarity: 1 Cake: yellow, some cracks Solution: Clear None
TABLE-US-00019 TABLE 17 Aqueous product, 100 mg/ml; Storage temp.: 5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) PH kg) Aggregates 0 81.8 1705.7 20.9 99.9 7.60 350 Colour: 3 Clarity: 1 Slightly opalescent None 1 85.9 1942.4 22.6 96.9 7.55 352 Colour: 3 Clarity: 1 Slightly opalescent None 2 95.7 1690.8 17.7 96.9 7.65 357 Colour: 3 Clarity: 1 Slightly opalescent None 3 104.3 1671.2 16.0 100.0 7.65 350 Colour: 3 Clarity: 1 Slightly opalescent None 6 96.0 1642.6 17.1 100.0 7.62 360 Colour: 3 Clarity: 1 Slightly opalescent None 9 102.8 1270.8 12.4 100.0 7.63 352 Colour: 3 Clarity: 2 Slightly opalescent None 11 86.2 1140.2 13.2 100.0 7.60 353 Colour: 3 Clarity: 2 Slightly opalescent None 12 113.9 1550.6 13.6 100.0 7.58 350 Colour: 3 Clarity: 2 Slightly opalescent None 15 114.7 1160.6 10.1 98.3 7.61 350 Colour: 3 Clarity: 2 Slightly opalescent None 18 86.2 907.4 10.5 100.0 7.67 340 Colour: 3 Clarity: 2 Slightly opalescent None
TABLE-US-00020 TABLE 18 Aqueous product, 100 mg/ml; Storage temp.: -20.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc. Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (mOsm/ Solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 81.8 1705.7 20.9 99.9 7.60 316 Colour: 3 Clarity: 1 Slightly opalescent None 1 89.3 2108.8 23.6 100.0 7.56 350 Colour: 3 Clarity: 1 Slightly opalescent None 2 112.0 2066.5 18.5 100.0 7.65 353 Colour: 3 Clarity: 1 Slightly opalescent None 3 100.2 2172.4 21.7 96.7 7.65 352 Colour: 3 Clarity: 1 Clear None 6 87.5 2672.3 30.6 100.0 7.62 352 Colour: 3 Clarity: 1 Clear None 9 97.1 2040.3 21.0 100.0 7.62 353 Colour: 3 Clarity: 1 Clear None 11 104.6 2234.0 21.4 100.0 7.60 353 Colour: 3 Clarity: 1 Clear None 12 94.5 1608.8 17.0 100.0 7.57 350 Colour: 3 Clarity: 1 Slightly opalescent None 15 118.0 2015.9 17.1 100.0 7.62 351 Colour: 3 Clarity: 1 Slightly opalescent None 18 90.6 1736.4 19.2 100.0 7.69 338 Colour: 3 Clarity: 1 Slightly opalescent None
TABLE-US-00021 TABLE 19 Freeze-dried product, 100 mg/ml; Storage temp.: 5.degree. C. Spe- Visual Pro- cific observation tein activ- Osmo- Colour 1-3 Time- conc Activ- ity Puri- lality Clarity 1-3 point (mg/ ity (U/ ty (rnOsm/ Cake/solution (month) ml) (U/ml) mg) (%) pH kg) Aggregates 0 76.0 1638.3 21.5 100.0 7.60 316 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None 1 71.6 1747.6 24.4 100.0 7.55 318 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None 2 81.6 1769.9 21.7 100.0 7.63 313 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None 3 84.1 1616.6 19.2 98.2 7.65 320 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None 6 96.7 2197.6 22.7 100.0 7.60 324 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None 9 ND ND ND ND ND ND ND 12 96.0 1978.4 20.6 100.0 7.57 322 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None 15 ND ND ND ND ND ND ND 18 80.6 1602.6 19.9 100.0 7.75 310 Colour: 3 Clarity: 1 Cake: Yellow, some cracks Solution: Clear None
Example 3
[0306] Concentrating a rhPBGD Composition by Tangential Flow Filtration (TFF)
[0307] The bulk solution of rhPBGD was then thawed for a minimum of three days at 5.degree. C. and in darkness.
[0308] The thawed solution was then centrifuged with 200 ml conical centrifuge tubes for approximately 10 minutes at 2200 g.
[0309] The solution was then filtered through a series of filters with the following pore-sizes: 5.0 .mu.m; 0.65 .mu.m; 0.45 .mu.m and 0.20 .mu.m before it was concentrated by tangential flow filtration (TFF).
[0310] The concentration by TFF was performed with a Millipore Labscale TFF System and Millipore Pellicon.RTM. XL Filter with a pump inlet pressure of approximately 20-25 psi and a pressure over the Pellicon.RTM. XL Filter of approximately 4-6 psi. The rhPBGD was protected from light during the procedure by covering the sample container of the TFF System by sheets of aluminum foil.
[0311] The concentrated rhPBGD solution obtained from the TFF procedure was then buffer-changed against a formulation buffer containing 3.67 mM Na.sub.2HPO.sub.4.times.2H.sub.2O, 27 mM glycin and 220 mM Mannitol prepared in sterile water. This was performed by continuously adding said buffer to the TFF-system and pressing it across the membrane until said buffer has replaced the previous buffer.
[0312] The concentrated and buffer-changed rhPBGD solution was then sterile filtered by passing it through a filter with a pore-size of 0.22 .mu.m. This sterile filtration was performed twice with a new filter each time.
[0313] The sterile concentrated rhPBGD solution was then placed in vials before it was freeze-dried as described in the method section.
Example 4
[0314] The effect of different modes of freeze-drying and/or the amount of excipients on the reconstitution time
[0315] PBGD was concentrated as described in example 3 and after the exchange of the buffer was the concentration of PBGD determined.
[0316] The concentrated PBGD solution was then freeze-dried in a Lyostar (FTM-systems) freeze-dryer. The solutions were filled in 2 and 6 ml injection glass vials (type 1) and stoppered with rubber stoppers (chlorobutyl).
[0317] Original Freeze-Drying Cycle:
[0318] The samples were loaded in ambient temperature and the shelves were cooled down to 0.degree. C. for 30 minutes. The temperature were lowered to -40.degree. C. (1.degree. C. per minute) and held there for 30 minutes and then the vacuum pressure was drawn to 126 mTorr and the primary drying began by raising the temperature to 0.degree. C. (1.degree. C. per minute). After 360 minutes of primary drying the temperature was raised to +30.degree. C. (0.5.degree. C. per minute) and full vacuum was drawn simultaneously (start of secondary drying). The temperature was held at +30.degree. C. for 360 minutes and the vials were then stoppered under vacuum.
[0319] Freeze-Drying with Inclusion of an Annealing Step:
[0320] After 30 minutes at -40.degree. C. the temperature was raised with a rate of 2.degree. C. per minute to -10.degree. C. or -20.degree. C. at which temperature they were kept for 120 or 420 minutes before the temperature was lowered again with 2.degree. C. per minute to -40.degree. C. were the samples were kept for 60-90 minutes before start of primary drying.
[0321] The results are shown in Table 20 where the short terms used with regard to the excipients and the freeze-drying cycle mean the following:
[0322] 1.times. amount of excipients refers to that the PBGD solution comprises 3.67 mM Na.sub.2HPO.sub.4.times.2H.sub.2O, 27 mM glycin and 220 mM Mannitol prepared in sterile water.
[0323] 1.5.times. amount excipients refers to that the PBGD solution comprises 5.51 mM Na.sub.2HPO.sub.4.times.2H.sub.2O, 40.5 mM glycin and 375 mM Mannitol prepared in sterile water, i.e. 1.5.times. of each of the components present in the 1.times. buffer.
[0324] 2.times. excipients refers to that the PBGD solution comprises 7.34 mM Na.sub.2HPO.sub.4.times.2H.sub.2O, 54 mM glycin and 500 mM Mannitol prepared in sterile water, i.e. 2.times. of each of the components present in the 1.times. buffer.
[0325] The original freeze-drying cycle is as described above.
[0326] The annealing freeze-drying cycle is as described above where the annealing step comprises raising the temperature to -10.degree. C. at keeping the sample at this temperature for 120 minutes before lowering it to -40.degree. C. again.
[0327] The extended annealing freeze-drying cycle, is as described above where the annealing step comprises raising the temperature to -20.degree. C. at keeping the sample at this temperature for 420 minutes before lowering it to -40.degree. C. again.
TABLE-US-00022 TABLE 20 Reconstitution time for different Protein free-drying cycles Amount of concentration Extended excipients (mg/ml) Original Annealing annealing 1x 198 600 550 480 1x 175 540 500 450 1x 150 450 480 180 1x 125 330 100 10 1x 100 40 10 10 1x 80 25 10 10 1.5x 200 480 40 60 1.5x 175 220 10 10 1.5x 150 60 10 10 1.5x 125 15 10 10 1.5x 100 10 10 10 2x 200 120 20 2x 175 40 20 2x 150 20 10 2x 100 10 10
Example 5
[0328] The Effect of Different Modes of Freeze-Drying and/or the Amount of Excipients on the Appearance of the Freeze-Dried Product
[0329] Concentrated and freeze-dried solutions of PBGD were prepared as described in example 4 and references to the amount of excipients and the type of freeze-drying cycle has the same meaning as in example 4.
[0330] The following results were obtained by visual inspection of the freeze-dried products:
[0331] A: Comparison of three products prepared from solutions comprising respectively, 4.6 mg/ml 66.6 mg/ml and 109.4 mg/ml rhPBGD showed that the number of cracks in the freeze-dried product increased as concentration of rhPBGD increased.
[0332] B: Comparison of two products, prepared from a solution comprising 150 mg/ml rhPBGD, and comprising 1.times. and 1.5.times. amount of excipients showed that the number of cracks in the freeze-dried product was lower for the product which comprised 1.5.times. amount of excipients than the product comprising 1.times. amount of excipients.
[0333] C: Comparison of two freeze-dried products prepared from a 150 mg/ml rhPBGD solution, comprising 1.times. and 2.times. amount of excipients showed that the number of cracks in the freeze-dried product with 2.times. amount of excipients was lower than the product comprising the 1.times. amount of excipients.
[0334] D: Comparison of three freeze-dried products prepared from a 150 mg/ml rhPBGD solution by using the original, the annealing and the extended annealing freeze-drying cycle showed that the number of cracks in the freeze-dried product was lower in the product which was prepared according to the annealing freeze-drying cycle than in the product prepared according to the original freeze-drying cycle. Furthermore, the number of cracks in the product prepared according to the extended annealing freeze-drying cycle was lower than in the product prepared according to the annealing freeze-drying cycle.
[0335] E: Three freeze-dried products were prepared from a 150, 175 and 200 mg/ml, respectively, rhPBGD solution. The freeze-dried products each comprised 1.5.times. amount of excipients and they were freeze-dried with the annealing cycle. None of the freeze-dried products comprised any cracks.
[0336] F: Two freeze-dried rhPBGD products were prepared from a 150 mg/ml rhPBGD solution. One of them comprised 1.times. amount of excipients and was prepared according to the original freeze-drying cycle, while the other comprised 1.5.times. amount of excipients and was prepared according to the extended annealing free-drying cycle. The product comprising 1.5.times. amount of excipients and prepared according to the extended annealing freeze-drying cycle comprised fewer cracks than the product comprising 1.times. amount of excipients and prepared according to the original freeze-drying cycle.
[0337] G: Two freeze-dried rhPBGD products were prepared from a 150 mg/ml rhPBGD solution. One of them comprised 1.times. amount of excipients and was prepared according to the original freeze-drying cycle, while the other comprised 0.1% Tween 80 in combination with the 1.times. amount of excipients and was prepared according to the extended annealing freeze-drying cycle. The product comprising the 0.1% Tween 80 in combination with the 1.times. amount of excipients and which was prepared according to the extended annealing freeze-drying cycle comprised fewer cracks than the product which comprised 1.times. amount of excipients and which was prepared according to the original freeze-drying cycle.
Example 6
[0338] The effect of recovery volume, the amount of excipients and the mode of freeze-drying on the stability of freeze-dried rhPBGD
[0339] Concentrated rhPBGD solutions freeze-dried samples were prepared as described in example 4.
[0340] The "bulk solution" is a concentrated solution of PBGD before freeze-drying.
[0341] Table 21 shows the results of rhPBGD solutions having the following characteristics with regard to the concentration of rhPBGD, amount of excipients (were the same definitions as in example 4 are used), the mode of freeze-drying (were the same definitions as in example 4 are used) and the ratio of the filling volume (fill. Vol which is the volume of the composition before it is freeze-dried) versus the recovery volume (Rec. vol which is the volume in which the freeze-dried product is resuspended):
[0342] Solution 1:
[0343] Approximately 5 mg/ml rhPBGD
[0344] 1.times. amount of excipient
[0345] Original freeze-drying cycle
[0346] Fill.vol=Rec. vol
[0347] Solution 2:
[0348] Approximately 70 mg/ml rhPBGD
[0349] 1.times. amount of excipient
[0350] Original freeze-drying cycle
[0351] Fill.vol=2.times. Rec. vol
[0352] Solution 3:
[0353] Approximately 110 mg/ml rhPBGD
[0354] 1.times. amount of excipient
[0355] Original freeze-drying cycle
[0356] Fill.vol=Rec. vol
[0357] Solution 4:
[0358] Approximately 70 mg/ml rhPBGD
[0359] 1.times. amount of excipient
[0360] Original freeze-drying cycle
[0361] Fill.vol=1.5.times. Rec. vol
[0362] Solution 5:
[0363] Approximately 90 mg/ml rhPBGD
[0364] 2/3.times. amount of excipient
[0365] Original freeze-drying cycle
[0366] Fill.vol=1.5.times. Rec. vol
[0367] Solution 6:
[0368] Approximately 60 mg/ml rhPBGD
[0369] 1/2.times. amount of excipient
[0370] Original freeze-drying cycle
[0371] Fill.vol=2.times. Rec. vol
[0372] Solution 7:
[0373] Approximately 110 mg/ml rhPBGD
[0374] 1.times. amount of excipient
[0375] Annealing freeze-drying cycle
[0376] Fill.vol=Rec. vol
[0377] Solution 8:
[0378] Approximately 60 mg/ml rhPBGD
[0379] 1.times. amount of exciplent
[0380] Annealing freeze-drying cycle
[0381] Fill.vol=2.times. Rec. vol
[0382] Solution 9:
[0383] Approximately 150 mg/ml rhPBGD
[0384] 1.times. amount of excipient
[0385] Annealing freeze-drying cycle
[0386] Fill.vol=Rec. vol
[0387] Solution 10:
[0388] Approximately 150 mg/ml rhPBGD
[0389] 1.times. amount of excipient
[0390] Original freeze-drying cycle
[0391] Fill.vol=Rec. vol
[0392] Although not shown in Table 21 the purity was also tested for each time point as was found to 100% in all cases.
[0393] For solution 2 at the week 4 and 9 time point and for solution 4 the week 9 time point a wrong recovery volume was used.
TABLE-US-00023 TABLE 21 Measuring Protein Specific point Fill. Vol Rec. Vol Osmolality concentration Activity activity Solution (week) (ml) (ml) pH (mosmol/kg) (mg/ml) (U/ml) (U/mg) 1 bulk 4.6 78 17.1 0 0.67 0.67 7.54 274 4.8 85 17.8 2 0.67 0.67 7.22 274 4.6 87 19.4 4 0.67 0.67 7.78 279 5.1 75 14.5 7 0.67 0.67 7.87 284 5.1 68 13.3 9 0.67 0.67 7.67 403 7.0 93 13.2 2 bulk 66.6 1129 16.9 0 0.67 0.335 7.64 525 113 1915 16.9 2 0.67 0.335 7.63 459 93.6 1593 17.0 4 0.67 0.67 7.75 264 64.6 1104 17.1 7 0.67 0.335 7.95 451 106.4 2106 19.8 9 0.67 0.67 7.59 247 51.4 859 16.7 3 bulk 109.4 1491 13.6 0 0.67 0.67 7.75 274 99.9 1598 16.0 2 0.67 0.67 7.64 269 91.4 1543 16.9 4 0.67 0.67 7.68 274 101.2 1825 18.0 7 0.67 0.67 7.71 278 103.4 2045 19.8 9 0.67 0.67 7.67 274 88.3 1656 18.8 4 bulk 71.5 1244 17.4 0 0.67 0.45 7.64 448 113.8 1748 15.4 2 0.67 0.45 7.63 411 86.4 1806 20.9 4 0.67 0.45 7.77 362 109.9 1897 17.3 7 0.67 0.45 7.90 379 95.2 686 (7.2) 9 0.67 0.67 7.63 273 59.7 1090 18.3 5 bulk 91.0 1610 17.7 0 0.67 0.45 7.65 296 119.4 2014 16.9 2 0.67 0.45 7.61 285 112.3 2093 18.6 4 0.67 0.45 7.90 292 125.1 2409 19.3 7 0.67 0.45 7.88 297 116.4 1928 16.6 9 0.67 0.45 7.34 278 102.5 1490 14.5 6 bulk 60.7 992 16.3 0 0.67 0.335 7.63 295 112.6 1753 15.6 2 0.67 0.335 7.60 288 86.9 1787 20.6 4 0.67 0.335 7.83 287 116.4 2106 18.1 7 0.67 0.335 8.20 299 109.7 695 (6.3) 9 0.67 0.335 7.44 287 95.2 1636 17.2 7 bulk 116.4 1926 16.5 0 0.67 0.67 7.56 275 101.1 1750 17.3 2 0.67 0.67 7.51 276 93.4 1831 19.6 4 0.67 0.67 7.60 270 101.6 1774 17.5 7 0.67 0.67 7.53 283 102.2 1639 16.0 9 0.67 0.67 7.46 274 89.9 960 10.7 8 bulk 64.5 1119 17.4 0 0.67 0.335 7.52 511 100.7 1718 17.1 2 0.67 0.335 7.51 459 99.3 1900 19.1 4 0.67 0.335 7.70 482 114.5 1913 16.7 9 0.67 0.335 7.29 425 102.3 1650 16.1 9 bulk 165 3587 21.7 0 0.60 0.60 7.71 309 121.4 2819 23.2 4 0.60 0.60 7.74 -- 140.3 2014 14.4 7.5 0.60 0.60 7.61 292 135.9 1640 12.1 10 bulk 165 3587 21.7 0 0.60 0.60 7.86 276 142.1 2397 16.9 3 0.40 0.40 8.20 314 141.9 2381 16.8 5 0.60 0.60 7.60 302 131.8 2304 17.5
Example 7
[0394] Effect of Different Excipients on the Stability of rhPBGD
[0395] rhPBGD was concentrated as described in example 4 and then the buffer was changed as to one of the four buffers described below. The products were then freeze-dried as described in example 4 with an original annealing step included and the stability of the samples were tested as described in example 6.
[0396] The effect of the following four formulations on the stability of rhPBGD was tested:
[0397] Formulation A (corresponds to solution 9 in example 6): 250 mM mannitol, 27 mM glycine and 3.67 mM Na.sub.2HPO.sub.4.
[0398] Formulation B: 250 mM mannitol, 27 mM glycine and 10 mM TRIS-HCL.
[0399] Formulation C: 250 mM mannitol, 27 mM glycine, 3.67 mM Na.sub.2HPO.sub.4 and 0.1% Tween 80.
[0400] Formulation D: 221 mM mannitol, 29 mM sucrose, 27 mM glycine, 3.67 mM Na.sub.2HPO.sub.4 and 0.1% Tween 80.
[0401] The results are shown in Table 22.
TABLE-US-00024 TABLE 22 Measuring Protein Specific point Fill. Vol Rec. Vol Osmolality concentration Activity activity Formulation (week) (ml) (ml) pH (mosmol/kg) (mg/ml) (U/ml) (U/mg) A Bulk 7.69 366 165 3587 21.7 0 0.60 0.60 7.71 309 121.4 2819 23.2 4 0.60 0.60 7.74 -- 140.3 2014 14.4 7.5 0.60 0.60 7.61 292 135.9 1640 12.1 B Bulk 7.54 320 173 3595 20.8 0 0.60 0.60 7.58 284 148.1 3726 25.2 3 0.60 0.60 7.57 280 165.4 2947 17.8 4 0.60 0.60 7.69 -- 167.5 2367 14.1 7.5 0.60 0.60 7.60 283 150.4 2235 14.9 C Bulk 7.40 338 178 3606 20.2 0 0.60 0.60 7.76 290 142.9 2662 18.6 3 0.60 0.60 7.43 285 181.7 2332 12.8 4 0.60 0.60 7.42 -- 173.1 1436 8.3 6 0.60 0.60 7.55 274 156.6 1254 7.4 7.5 0.60 0.60 7.34 274 141.5 1252 8.9 D Bulk 7.41 337 175 3869 22.1 0 0.60 0.60 7.80 292 127.5 2355 18.5 3 0.60 0.60 7.35 288 143.9 1988 13.8 4 0.60 0.60 7.26 -- 159.3 1644 10.3 6 0.60 0.60 7.30 281 135.7 1236 9.1 7.5 0.60 0.60 7.28 282 125.7 1146 9.1
Sequence CWU
1
1
2611035DNAHomo sapiens 1atgagagtga ttcgcgtggg tacccgcaag agccagcttg
ctcgcataca gacggacagt 60gtggtggcaa cattgaaagc ctcgtaccct ggcctgcagt
ttgaaatcat tgctatgtcc 120accacagggg acaagattct tgatactgca ctctctaaga
ttggagagaa aagcctgttt 180accaaggagc ttgaacatgc cctggagaag aatgaagtgg
acctggttgt tcactccttg 240aaggacctgc ccactgtgct tcctcctggc ttcaccatcg
gagccatctg caagcgggaa 300aaccctcatg atgctgttgt ctttcaccca aaatttgttg
ggaagaccct agaaaccctg 360ccagagaaga gtgtggtggg aaccagctcc ctgcgaagag
cagcccagct gcagagaaag 420ttcccgcatc tggagttcag gagtattcgg ggaaacctca
acacccggct tcggaagctg 480gacgagcagc aggagttcag tgccatcatc ctggcaacag
ctggcctgca gcgcatgggc 540tggcacaacc gggttgggca gatcctgcac cctgaggaat
gcatgtatgc tgtgggccag 600ggggccttgg gcgtggaagt gcgagccaag gaccaggaca
tcttggatct ggtgggtgtg 660ctgcacgatc ccgagactct gcttcgctgc atcgctgaaa
gggccttcct gaggcacctg 720gaaggaggct gcagtgtgcc agtagccgtg catacagcta
tgaaggatgg gcaactgtac 780ctgactggag gagtctggag tctagacggc tcagatagca
tacaagagac catgcaggct 840accatccatg tccctgccca gcatgaagat ggccctgagg
atgacccaca gttggtaggc 900atcactgctc gtaacattcc acgagggccc cagttggctg
cccagaactt gggcatcagc 960ctggccaact tgttgctgag caaaggagcc aaaaacatcc
tggatgttgc acggcaattg 1020aacgatgccc attaa
103521035DNAHomo sapiens 2atgagagtga ttcgcgtggg
tacccgcaag agccagcttg ctcgcataca gacggacagt 60gtggtggcaa cattgaaagc
ctcgtaccct ggcctgcagt ttgaaatcat tgctatgtcc 120accacagggg acaagattct
tgatactgca ctctctaaga ttggagagaa aagcctgttt 180accaaggagc ttgaacatgc
cctggagaag aatgaagtgg acctggttgt tcactccttg 240aaggacctgc ccactgtgct
tcctcctggc ttcaccatcg gagccatctg caagcgggaa 300aaccctcatg atgctgttgt
ctttcaccca aaatttgttg ggaagaccct agaaaccctg 360ccagagaaga gtgtggtggg
aaccagctcc ctgcgaagag cagcccagct gcagagaaag 420ttcccgcatc tggagttcag
gagtattcgg ggaaacctca acacccggct tcggaagctg 480gacgagcagc aggagttcag
tgccatcatc ctggcaacag ctggcctgca gcgcatgggc 540tggcacaacc gggtggggca
gatcctgcac cctgaggaat gcatgtatgc tgtgggccag 600ggggccttgg gcgtggaagt
gcgagccaag gaccaggaca tcttggatct ggtgggtgtg 660ctgcacgatc ccgagactct
gcttcgctgc atcgctgaaa gggccttcct gaggcacctg 720gaaggaggct gcagtgtgcc
agtagccgtg catacagcta tgaaggatgg gcaactgtac 780ctgactggag gagtctggag
tctagacggc tcagatagca tacaagagac catgcaggct 840accatccatg tccctgccca
gcatgaagat ggccctgagg atgacccaca gttggtaggc 900atcactgctc gtaacattcc
acgagggccc cagttggctg cccagaactt gggcatcagc 960ctggccaact tgttgctgag
caaaggagcc aaaaacatcc tggatgttgc acggcaattg 1020aacgatgccc attaa
103531035DNAHomo sapiens
3atgagagtga ttcgcgtggg tacccgcaag agccagcttg ctcgcataca gacggacagt
60gtggtggcaa cattgaaagc ctcgtaccct ggcctgcagt ttgaaatcat tgctatgtcc
120accacagggg acaagattct tgatactgca ctctctaaga ttggagagaa aagcctgttt
180accaaggagc ttgaacatgc cctggagaag aatgaagtgg acctggttgt tcactccttg
240aaggacctgc ccactgtgct tcctcctggc ttcaccatcg gagccatctg caagcgggaa
300aaccctcatg atgctgttgt ctttcaccca aaatttgttg ggaagaccct agaaaccctg
360ccagagaaga gtgtggtggg aaccagctcc ctgcgaagag cagcccagct gcagagaaag
420ttcccgcatc tggagttcag gagtattcgg ggaaacctca acacccggct tcggaagctg
480gacgagcagc aggagttcag tgccatcatc ctggcaacag ctggcctgca gcgcatgggc
540tggcacaacc gggtggggca gatcctgcac cctgaggaat gcatgtatgc tgtgggccag
600ggggccttgg gcgtggaagt gcgagccaag gaccaggaca tcttggatct ggtgggtgtg
660ctgcacgatc ccgagactct gcttcgctgc atcgctgaaa gggccttcct gaggcacctg
720gaaggaggct gcagtgtgcc agtagccgtg catacagcta tgaaggatgg gcaactgtac
780ctgactggag gagtctggag tctagacggc tcagatagca tacaagagac catgcaggct
840accatccatg tccctgccca gcatgaagat ggccctgagg atgacccaca gttggtaggc
900atcactgctc gtaacattcc acgagggccc cagttggctg cccagaactt gggcatcagc
960ctggccaact tgttgctgag caaaggagcc aaaaacatcc tggatgttgc acggcaattg
1020aacgatgccc attaa
103541034DNAHomo sapiens 4atgagagtga ttcgcgtggg tacccgcaag agccagcttg
ctcgcataca gacggacagt 60gtggtggcaa cattgaaagc ctcgtaccct ggcctgcagt
ttgaaatcat tgctatgtcc 120accacagggg acaagattct tgatactgca ctctctaaga
ttggagagaa aagcctgttt 180accaaggagc ttgaacatgc cctggagaag aatgaagtgg
acctggttgt tcactccttg 240aaggacctgc ccactgtgct tcctcctggc ttcaccatcg
gagccatctg caagcgggaa 300aaccctcatg atgctgttgt cttcacccaa aatttgttgg
gaagacccta gaaaccctgc 360cagagaagag tgtggtggga accagctccc tgcgaagagc
agcccagctg cagagaaagt 420tcccgcatct ggagttcagg agtattcggg gaaacctcaa
cacccggctt cggaagctgg 480acgagcagca ggagttcagt gccatcatcc tggcaacagc
tggcctgcag cgcatgggct 540ggcacaaccg ggtggggcag atcctgcacc ctgaggaatg
catgtatgct gtgggccagg 600gggccttggg cgtggaagtg cgagccaagg accaggacat
cttggatctg gtgggtgtgc 660tgcacgatcc cgagactctg cttcgctgca tcgctgaaag
ggccttcctg aggcacctgg 720aaggaggctg cagtgtgcca gtagccgtgc atacagctat
gaaggatggg caactgtacc 780tgactggagg agtctggagt ctagacggct cagatagcat
acaagagacc atgcaggcta 840ccatccatgt ccctgcccag catgaagatg gccctgagga
tgacccacag ttggtaggca 900tcactgctcg taacattcca cgagggcccc agttggctgc
ccagaacttg ggcatcagcc 960tggccaactt gttgctgagc aaaggagcca aaaacatcct
ggatgttgca cggcaattga 1020acgatgccca ttaa
103451035DNAHomo sapiens 5atgagagtga ttcgcgtggg
tacccgcaag agccagcttg ctcgcataca gacgggcagt 60gtggtggcaa cattgaaagc
ctcgtaccct ggcctgcagt ttgaaatcat tgctatgtcc 120accacagggg acaagattct
tgatactgca ctctctaaga ttggagagaa aagcctgttt 180accaaggagc ttgaacatgc
cctggagaag aatgaagtgg acctggttgt tcactccttg 240aaggacctgc ccactgtgct
tcctcctggc ttcaccatcg gagccatctg caagcgggaa 300aaccctcatg atgctgttgt
ctttcaccca aaatttgttg ggaagaccct agaaaccctg 360ccagagaaga gtgtggtggg
aaccagctcc ctgcgaagag cagcccagct gcagagaagg 420ttcccgcatc tggagttcag
gagtattcgg ggaaacctca acacccggct tcggaagctg 480gacgagcagc aggagttcag
tgtcatcatc ctggcaacag ctggcctgca gcgcatgggc 540tggcacaacc gggttgggca
gatcctgcac cctgaggaat gcatgtatgc tgtgggccag 600ggggccttgg gcgtggaagt
gcgagccaag gaccaggaca tcttggatct ggtgggtgtg 660ctgcacgatc ccgagactct
gcttcgctgc atcgctgaaa gggccttcct gaggcacctg 720gaaggaggct gcagtgtgcc
agtagccgtg catacagcta tgaaggatgg gcaactgtac 780ctgactggag gagtctggag
tctagacggc tcagatagca tacaagagac catgcaggct 840accatccatg tccctgccca
gcatgaagat ggccctgagg atgacccaca gttggtaggc 900atcactgctc gtaacattcc
acgagggccc cagttggctg cccagaactt gggcatcagc 960ctggccaact tgttgctgag
caagggagcc aaaaacatcc tggatgttgc acggcaattg 1020aacgatgccc attaa
103561035DNAHomo sapiens
6atgagagtga ttcgcgtggg tacccgcaag agccagcttg ctcgcataca gacggacagt
60gtggtggcaa cattgaaagc ctcgtaccct ggcctgcagt ttgaaatcat tgctatgtcc
120accacagggg acaagattct tgatactgca ctctctaaga ttggagagaa aagcctgttt
180accaaggagc ttgaacatgc cctggagaag aatgaagtgg acctggttgt tcactccttg
240aaggacctgc ccactgtgct tcctcctggc ttcaccatcg gagccatctg caagcgggaa
300aaccctcatg atgctgttgt ctttcaccca aaatttgttg ggaagaccct agaaaccctg
360ccagagaaga gtgtggtggg aaccagctcc ctgcgaagag cagcccagct gcagagaaag
420ttcccgcatc tggagttcag gagtattcgg ggaaacctca acacccggct tcggaagctg
480gacgagcagc aggagttcag tgccatcatc ctggcaacag ctggcctgca gcgcatgggc
540tggcacaacc gggtggggca gatcctgcac cctgaggaat gcatgtatgc tgtgggccag
600ggggccttgg gcgtggaagt gcgagccaag gaccaggaca tcttggatct ggtgggtgtg
660ctgcacgatc ccgagactct gcttcgctgc atcgctgaaa gggccttcct gaggcacctg
720gaaggaggtt gcagtgtgcc agtagccgtg catacagcta tgaaggatgg gcaactgtac
780ctgactggag gagtctggag tctagacggc tcagatagca tacaagagac catgcaggct
840accatccatg tccctgccca gcatgaagat ggccctgagg atgacccaca gttggtaggc
900atcactgctc gtaacattcc acgagggccc cagttggctg cccagaactt gggcatcagc
960ctggccaact tgttgctgag caaaggagcc aaaaacatcc tggatgttgc acggcaattg
1020aacgatgccc attaa
103571034DNAHomo sapiens 7atgagagtga ttcgcgtggg tacccgcaag agccagcttg
ctcgcataca gacggacagt 60gtggtggcaa cattgaaagc ctcgtaccct ggcctgcagt
ttgaaatcat tgctatgtcc 120accacagggg acaagattct tgatactgca ctctctaaga
ttggagagaa aagcctgttt 180accaaggagc ttgaacatgc cctggagaag aatgaagtgg
acctggttgt tcactccttg 240aaggacctgc ccactgtgct tcctcctggc ttcaccatcg
gagccatctg caagcgggaa 300aaccctcatg atgctgttgt ctttcaccca aaatttgttg
ggaagaccct agaaaccctg 360ccagagaaga gtgtggtggg aaccagctcc ctgcgaagag
cagcccagct gcagagaaag 420ttcccgcatc tggagttcag gagtattcgg ggaaacctca
acacccggct tcggaagctg 480gacgagcagc aggagttcag tgccatcatc ctggcaacag
ctggcctgca gcgcatgggc 540tggcacaacc gggtggggca gatcctgcac cctgaggaat
gcatgtatgc tgtgggccag 600ggggccttgg gcgtggaagt gcgagccaag gaccaggaca
tcttggatct ggtgggtgtg 660ctgcacgatc ccgagactct gcttcgctgc atcgctgaaa
gggccttcct gaggcacctg 720gaaggaggct gcagtgtgcc agtagccgtg catacagcta
tgaaggatgg gcaactgtac 780ctgactggag gagtctggag tctagacggc tcagatagca
tacaagagac catgcaggct 840accatccatg tccctgccca gcatgaagat ggccctgagg
atgacccaca gttggtaggc 900atcactgctc gtaacattcc acgagggccc cagttggctg
cccagaactt gggcatcagc 960ctggccaact tgttgctgag caaaggagcc aaaaacatcc
tggatgttgc acggcaatta 1020acgatgccca ttaa
103481035DNAHomo sapiens 8atgagagtga ttcgcgtggg
tacccgcaag agccagcttg ctcgcataca gacggacagt 60gtggtggcaa cattgaaagc
ctcgtaccct ggcctgcagt ttgaaatcat tgctatgtcc 120accacagggg acaagattct
tgatactgca ctctctaaga ttggagagaa aagcctgttt 180accaaggagc ttgaacatgc
cctggagaag aatgaagtgg acctggttgt tcactccttg 240aaggacctgc ccactgtgct
tcctcctggc ttcaccatcg gagccatctg caagcgggaa 300aaccctcatg atgctgttgt
ctttcaccca aaatttgttg ggaagaccct agaaaccctg 360ccagagaaga gtgtggtggg
aaccagctcc ctgcgaagag cagcccagct gcagagaaag 420ttcccgcatc tggagttcag
gagtattcgg ggaaacctca acacccggct tcggaagctg 480gacgagcagc aggagttcag
tgccatcatc ctggcaacag ctggcctgca gcgcatgggc 540tggcacaacc gggtggggca
gatcctgcac cctgaggaat gcatgtatgc tgtgggccag 600ggggccttgg gcgtggaagt
gcgagccaag gaccaggaca tcttggatct ggtgggtgtg 660ctgcacgatc ccgagactct
gcttcgctgc atcgctgaaa gggccttcct gaggcacctg 720gaaggaggct gcagtgtgcc
agtagccgtg catacagcta tgaaggatgg gcaactgtac 780ctgactggag gagtctggag
tctagacggc tcagatagca tacaagagac catgcaggcc 840accatccatg tccctaccca
gcatgaagat ggccctgagg atgacccaca gttggtaggc 900atcactgctc gtaacattcc
acgagggccc cagttggctg cccagaactt gggcatcagc 960ctggccaact tgttgctgag
caaaggagcc aaaaacatcc tggatgttgc acggcaattg 1020aacgatgccc attaa
103591260DNAHomo sapiens
9cacaggaaac agctatgacc atgattacgc caagctcgaa attaaccctc actaaaggga
60acaaaagctg gagctccacc gcggtggcgg ccgctctaga actagtggat cccccgggct
120gcaggaattc atgagagtga ttcgcgtggg tacccgcaag agccagcttg ctcgcataca
180gacggacagt gtggtggcaa cattgaaagc ctcgtaccct ggcctgcagt ttgaaatcat
240tgctatgtcc accacagggg acaagattct tgatactgca ctctctaaga ttggagagaa
300aagcctgttt accaaggagc ttgaacatgc cctggagaag aatgaagtgg acctggttgt
360tcactccttg aaggacctgc ccactgtgct tcctcctggc ttcaccatcg gagccatctg
420caagcgggaa aaccctcatg atgctgttgt ctttcaccca aaatttgttg ggaagaccct
480agaaaccctg ccagagaaga gtgtggtggg aaccagctcc ctgcgaagag cagcccagct
540gcagagaaag ttcccgcatc tggagttcag gagtattcgg ggaaacctca acacccggct
600tcggaagctg gacgagcagc aggagttcag tgccatcatc ctggcaacag ctggcctgca
660gcgcatgggc tggcacaacc gggttgggca gatcctgcac cctgaggaat gcatgtatgc
720tgtgggccag ggggccttgg gcgtggaagt gcgagccaag gaccaggaca tcttggatct
780ggtgggtgtg ctgcacgatc ccgagactct gcttcgctgc atcgctgaaa gggccttcct
840gaggcacctg gaaggaggct gcagtgtgcc agtagccgtg catacagcta tgaaggatgg
900gcaactgtac ctgactggag gagtctggag tctagacggc tcagatagca tacaagagac
960catgcaggct accatccatg tccctgccca gcatgaagat ggccctgagg atgacccaca
1020gttggtaggc atcactgctc gtaacattcc acgagggccc cagttggctg cccagaactt
1080gggcatcagc ctggccaact tgttgctgag caaaggagcc aaaaacatcc tggatgttgc
1140acggcaattg aacgatgccc attaataagc ttatcgatac cgtcgacctc gagggggggc
1200ccggtaccca attcgcccta tagtgagtcg tattacaatt cactggccgt cgttttacaa
1260101113DNAHomo sapiens 10cacacagcct actttccaag cggagccatg tctggtaacg
gcaatgcggc tgcaacggcg 60gaagaaaaca gcccaaagat gagagtgatt cgcgtgggta
cccgcaagag ccagcttgct 120cgcatacaga cggacagtgt ggtggcaaca ttgaaagcct
cgtaccctgg cctgcagttt 180gaaatcattg ctatgtccac cacaggggac aagattcttg
atactgcact ctctaagatt 240ggagagaaaa gcctgtttac caaggagctt gaacatgccc
tggagaagaa tgaagtggac 300ctggttgttc actccttgaa ggacctgccc actgtgcttc
ctcctggctt caccatcgga 360gccatctgca agcgggaaaa ccctcatgat gctgttgtct
ttcacccaaa atttgttggg 420aagaccctag aaaccctgcc agagaagagt gtggtgggaa
ccagctccct gcgaagagca 480gcccagctgc agagaaagtt cccgcatctg gagttcagga
gtattcgggg aaacctcaac 540acccggcttc ggaagctgga cgagcagcag gagttcagtg
ccatcatcct ggcaacagct 600ggcctgcagc gcatgggctg gcacaaccgg gttgggcaga
tcctgcaccc tgaggaatgc 660atgtatgctg tgggccaggg ggccttgggc gtggaagtgc
gagccaagga ccaggacatc 720ttggatctgg tgggtgtgct gcacgatccc gagactctgc
ttcgctgcat cgctgaaagg 780gccttcctga ggcacctgga aggaggctgc agtgtgccag
tagccgtgca tacagctatg 840aaggatgggc aactgtacct gactggagga gtctggagtc
tagacggctc agatagcata 900caagagacca tgcaggctac catccatgtc cctgcccagc
atgaagatgg ccctgaggat 960gacccacagt tggtaggcat cactgctcgt aacattccac
gagggcccca gttggctgcc 1020cagaacttgg gcatcagcct ggccaacttg ttgctgagca
aaggagccaa aaacatcctg 1080gatgttgcac ggcaattgaa cgatgcccat taa
1113111380DNAHomo sapiens 11agcaggtcct actatcgcct
ccctctagtc tctgcttctt tggatccctg aggagggcag 60aaggaagaaa acagcccaaa
gatgagagtg attcgcgtgg gtacccgcaa gagccagctt 120gctcgcatac agacggacag
tgtggtggca acattgaaag cctcgtaccc tggcctgcag 180tttgaaatca ttgctatgtc
caccacaggg gacaagattc ttgatactgc actctctaag 240attggagaga aaagcctgtt
taccaaggag cttgaacatg ccctggagaa gaatgaagtg 300gacctggttg ttcactcctt
gaaggacctg cccactgtgc ttcctcctgg cttcaccatc 360ggagccatct gcaagcggga
aaaccctcat gatgctgttg tctttcaccc aaaatttgtt 420gggaagaccc tagaaaccct
gccagagaag agtgtggtgg gaaccagctc cctgcgaaga 480gcagcccagc tgcagagaaa
gttcccgcat ctggagttca ggagtattcg gggaaacctc 540aacacccggc ttcggaagct
ggacgagcag caggagttca gtgccatcat cctagcaaca 600gctggcctgc agcgcatggg
ctggcacaac cgggttgggc agatcctgca ccctgaggaa 660tgcatgtatg ctgtgggcca
gggggccttg ggcgtggaag tgcgagccaa ggaccaggac 720atcttggatc tggtgggtgt
gctgcacgat cccgagactc tgcttcgctg catcgctgaa 780agggccttcc tgaggcacct
ggaaggaggc tgcagtgtgc cagtagccgt gcatacagct 840atgaaggatg ggcaactgta
cctgactgga ggagtctgga gtctagacgg ctcagatagc 900atacaagaga ccatgcaggc
taccatccat gtccctgccc agcatgaaga tggccctgag 960gatgacccac agttggtagg
catcactgct cgtaacattc cacgagggcc ccagttggct 1020gcccagaact tgggcatcag
cctggccaac ttgttgctga gcaaaggagc caaaaccatc 1080ctggatgttg cacggcagct
taacgatgcc cattaactgg tttgtggggc acagatgcct 1140gggttgctgc tgtccagtgc
ctacatcccg ggcctcagtg ccccattctc actgctatct 1200ggggagtgat taccccggga
gactgaactg cagggttcaa gccttccagg gatttgcctc 1260accttggggc cttgatgact
gccttgcctc ctcagtatgt gggggcttca tctctttaga 1320gaagtccaag caacagcctt
tgaatgtaac caatcctact aataaaccag ttctgaaggt 1380121377DNAHomo sapiens
12cacacagcct actttccaag cggagccatg tctggtaacg gcaatgcggc tgcaacggcg
60gaagaaaaca gcccaaagat gagagtgatt cgcgtgggta cccgcaagag ccagcttgct
120cgcatacaga cggacagtgt ggtggcaaca ttgaaagcct cgtaccctgg cctgcagttt
180gaaatcattg ctatgtccac cacaggggac aagattcttg atactgcact ctctaagatt
240ggagagaaaa gcctgtttac caaggagctt gaacatgccc tggagaagaa tgaagtggac
300ctggttgttc actccttgaa ggacctgccc actgtgcttc ctcctggctt caccatcgga
360gccatctgca agcgggaaaa ccctcatgat gctgttgtct ttcacccaaa atttgttggg
420aagaccctag aaaccctgcc agagaagagt gtggtgggaa ccagctccct gcgaagagca
480gcccagctgc agagaaagtt cccgcatctg gagttcagga gtattcgggg aaacctcaac
540acccggcttc ggaagctgga cgagcagcag gagttcagtg ccatcatcct agcaacagct
600ggcctgcagc gcatgggctg gcacaaccgg gtggggcaga tcctgcaccc tgagaaatgc
660atgtatgctg tgggccaggg ggccttgggc gtggaagtgc gagccaagga ccaggacatc
720ttggatctgg tgggtgtgct gcacgatccc gagactctgc ttcgctgcat cgctgaaagg
780gccttcctga ggcacctgga aggaggctgc agtgtgccag tagccgtgca tacagctatg
840aaggatgggc aactgtacct gactggagga gtctggagtc tagacggctc agatagcata
900caagagacca tgcaggctac catccatgtc cctgcccagc atgaagatgg ccctgaggat
960gacccacagt tggtaggcat cactgctcgt aacattccac gagggcccca gttggctgcc
1020cagaacttgg gcatcagcct ggccaacttg ttgctgagca aaggagccaa aaacatcctg
1080gatgttgcac ggcagcttaa cgatgcccat taactggttt gtggggcaca gatgcctggg
1140ttgctgctgt ccagtgccta catcccgggc ctcagtgccc cattctcact gctatctggg
1200gagtgattac cccgggagac tgaactgcag ggttcaagcc ttccagggat ttgcctcacc
1260ttggggcctt gatgactgcc ttgcctcctc agtatgtggg ggcttcatct ctttagagaa
1320gtccaagcaa cagcctttga atgtaaccaa tcctactaat aaaccagttc tgaaggt
13771310024DNAHomo sapiens 13aatcatgatt gttaattatg ttcatgatta caggcgcggt
ggctcacgcc tgtactccca 60gcactttggg aggccgaggt gggcgaatca cctgaggtca
ggagttcaag acctgcctga 120ctaacatgga gaaacctcat ctctaccaaa aatacaaaat
tagccgggtg tggtggtgcg 180tgcctgtaat cccagctact cggggggctg aggcaggaga
attgcttgaa cccgggaggc 240ggaggttgca gtgagctgag atcgtgccat tgcattccag
cctgggcaac aagagcgaaa 300ctccgtctca aaaaaaaaaa aaaattatgt tcatgggaaa
gcacttttcc taacaagccc 360ttttctcact acatgtaggt ttgtgctccc acttcagtta
cttgtcttta ggcatgacct 420ttaatctctc tgaaccagtt tcctcatttt aagaattgaa
atgctggctg ggccagtcgt 480cacgcctgta atcccagcac tttgggaggc caaggcgaga
tgactgcttg agtccaggag 540ttcgagacta gcctgggcaa catagtgagg ccacctcccc
gctgtctcta taaaaaaatc 600tagaaattag tcccacgtgg tgatgtgcgc ctgtagtccc
agctgcttgg gaggctgagg 660tggggggatc gctgaagccg ggaggtcaag gctgcagtga
cccgtggtca tgccgctgca 720ctctagtctg gggacacagt gagaccccgt atcaaaaaga
aaaatgctgc ctatttcaag 780gttgtagcaa agctaagttt gaacagagca aaggaagcgc
catagaagct gcactacttg 840ctcatgtcac agctggggaa tggggaggtc gaatggggag
gtccactgtc gcaatgttcc 900aattcccgcc cagagggagg gacctcccct tcgagggagg
gcgccggaag tgacgcgagg 960ctctgcggag accaggagtc agactgtagg acgacctcgg
gtcccacgtg tccccggtac 1020tcgccggccg gagcctccgg cttcccgggg ccgggggacc
ttagcggcac ccacacacag 1080cctactttcc aagcggagcc atgtctggta acggcaatgc
ggctgcaacg gcggtgagtg 1140ctgagccggt gaccagcaca ctttgggctt ctggacgagc
cgtgcagcga ttggccccag 1200gttgccatcc tcagtcgtct attggtcaga acggctatct
tttttttttt tttttttttt 1260tttttggtcc gagtagcttt taaagggcca gtagctcggt
tgccctccgg aaggaatggg 1320gaaatcagag agcggtgata ctgggttaag agtggaagga
ttgtttggaa cggaactccg 1380gtccctgcgg gcatctgggt gggattccca tcaggcctgg
gatgcacggc tctagattta 1440gtgacccaga ccaagaacgt tcgtctacac agacggggtc
ctttcattcg aggctgggct 1500gaggcggatg cagatacggc ccctttggga agacacgttc
cacttttgat tcataggaga 1560gagtatcagc caagcctccg aactgcacac aaacgtctta
gaagtgcgcc ttctttttgt 1620gttatagtgg tctcccagcc acagccaacg ctccaagtcc
ccagctgtga cacacctact 1680gaattactac cgtgggtggg aggccgccgt gggcctttcc
attacgagcc tgcttgccga 1740gccctgggct tgtgcacaga caaactgcag agctggtgga
ggccactgcc aggccgagat 1800aagaaagaga tggggagctg ctaatctccc cctgtccagc
ctgttggtga gggctgggat 1860ctttgctctt gcagtcattc cagagccctg gactaggagt
aggaagatct gaattgtggc 1920cccaactctc tttcggttat tagctctgtg accctaggca
agtcacctca tcccttgatg 1980ccacccgttg cttctgtaac atggtcccaa aggtgcctgt
cttgtccacc tgataggatt 2040tttgagacga caacaatatg caaaagcaat agcttcaaca
tagaagtgct cagtgtttta 2100ttttttaatg aaacggtttg acttggatat gctgtgcaca
ttcaatgaac ttaaggaatt 2160gtttgaacct agtagttctg ggaccttaga gtcctttctg
tgggctccct gtggcccaga 2220tttttggtgg ccacgtttaa tatcaagcct agcctaattt
gcaaagggtc tcccagggtt 2280aatttattgg agtgatcaca tggagtagac cagagtctga
gggcagaaag ctgtcacctg 2340cttcggcaat agaggcccca gatgtctggg tgcaaaagaa
ctccatagca ccccgaccaa 2400catggtgaaa ccccgtctct actaaaaata taaaaattag
gccgagcaca gtggctcatg 2460cctgtaatcc tagcactttg ggaggccgag gcaggtggat
tgcctgagct caggagttcg 2520agaccagcct agggaacaca gtgaaacccc gtttctacta
aaaatacaaa aaattagccg 2580acgtggtggc atgcgcctgc agtcccagct acttgggagg
ctaagacagg agaatcgctt 2640gaacctggga ggtggaggtt gcactgagcc gagaccgcgc
cattgcactc cagcctgggt 2700gacagagcgc aactccccct caaaaaaaga aaaaaatata
tatatatata tatatatata 2760tacacacata ttttagctgg gcatggtggt gtgcgtctgt
agtagtccca gctacttggg 2820aggctgagtc aggagaatcg cttgaacctg gaaggcagtg
gttgtagtta gctgagaaca 2880tgccactgca ctccagcctg ggcaacagag ggagactctg
tctcaaaaaa aaaaaaaaaa 2940aggaactaca taggatgaac atcccagatc agggaatgtt
gactgtcgac agtatcagta 3000tctacagtgg ctactgtctg atgtagaaag aaatgggatc
aggctaggcg tggtggctca 3060cgcctgtaat cccagctctt tgggaggctg gggcaggagg
atcacaagtt cgagaccagc 3120ctggccaaca cagtgaaacc ccgtctctac taaaaatgtg
aaaattagct gggcatggtg 3180gaacatgctg tagttccagc ttgaacccag gggtggaggt
tgtagtgagc ctagatcacg 3240ccactgcact ccagcctgag caaaacagtg agactctgtc
taaaaaaaaa aaaaaaaaaa 3300agagaaatgg gacctccgtc ttagactgaa gaattcagtt
ctacgtgctt agcagtgaat 3360acttttgtcc aaggtactct ggcaggagga agaggcgtgt
cctcttgagt tcttgacttg 3420ggctctggcc tgttaatatt tccatgttgg tgaaaccaga
ggcagcactc taggtgaacg 3480aactttaggc agcgcagcct cctagtctta tggaacatct
gaggcagaag aaacctgagt 3540ccaacctttt cattttatag atgaacaaac agatcctgat
gggacagtgt acccaaggtc 3600acccagccaa gaggctgagc aggactgtac gtcagatccg
tttacctcag tccttaatgc 3660atgcagtcca gccagattaa gggaccctta atactgtcag
ctttccccac tgtgggatct 3720tcatcctctt gacttctttt gtagccagac atctgggcct
cttgctggag aaggtggcag 3780cttgctgctc ttagactcta gtctactcca tgtggcatct
ggatggcact gaaattttct 3840caagtgcctt gtctgttgta gataatgaat ctatcctcca
gtgactcagc acaggttccc 3900cagtgtggtc ctggctgccc tgcccctgcc agctgcaggc
cccacccttc ctgtggccag 3960gctgatgggc cttatctctt tacccacctg gctgtgcaca
gcactcccac tgacaactgc 4020cttggtcaag gtgggcttca gggctcagtg tcctggttac
tgcagcggca gcaacagcag 4080gtcctactat cgcctccctc tagtctctgc ttctctggat
ccctgaggag ggcagaaggt 4140actgaggaag gttaaaggga ccagccttgg agtatttccc
cactctgaga ctcagctggc 4200cacaggccag gttctgaatt tcctttcttc caagccagtg
attctggttc ttggacaagg 4260tgttgaggaa cactagaaac agaggggact gtgacctggg
gactttttct gcaggaagaa 4320aacagcccaa agatgagagt gattcgcgtg ggtacccgca
agagccaggt gggtgcagga 4380gccggggtgg aggaggtttg tcagaacagt tatgatgctc
acagcatcac aaattggggg 4440actcagaggg ttagttccta gtatgaagga gatggggtgg
ctgggcgtta agttccccgg 4500gaaatggcag attacattct atggcaagat catccctagg
ctgggaaaat tgttggagtg 4560cagagggctc ccaagcccct tctcatgccc agatggaaat
tccagtccct tcaggatctg 4620cctaacctgt gacagtctaa agagtctgag ccgtggctgg
gaagggcagg actaatccaa 4680atctctaccc gcagcttgct cgcatacaga cggacagtgt
ggtggcaaca ttgaaagcct 4740cgtaccctgg cctgcagttt gaaatcagtg agttttctgg
aaaggagtgg aagctaatgg 4800gaagcccagt accccgagag gagagaacac aacatttctg
gctttgccta tagctaaagc 4860ccgtcccgct gccccgagat tccttctggg ctgctcccag
ttctgaaggt gctttcctct 4920gaatacctcc agctctgact acctggatta gcctggcatt
taacatcttg agctttgggt 4980ctttttatga gtgtttctgg tcttcctgct cgattgtata
tactcagagg gcaggaacca 5040gggattatgt gcctctgtcc ccatcatgaa tcgtagcaca
gtgctaggct cagtaaatgc 5100tgatcaataa tgagcacctg attgattgac tctctcctca
gttgctatgt ccaccacagg 5160ggacaagatt cttgatactg cactctctaa ggtaacaaca
tcttcctccc cagttcttgt 5220ccccactctt ctttccttcc ctgaagggat tcactcaggc
tctttctgtc cggcagattg 5280gagagaaaag cctgtttacc aaggagcttg aacatgccct
ggagaagaat gagtaagtaa 5340agataggaga gtgtggtgcc ctcccagtct cttgctggga
ccctagtatg ctaggtctct 5400tgctgggacc cggggtgtca gataggctgc tgggcttaaa
ccctcagaga ggctgaaggc 5460agctcatagg tgggtttttt caggcttcag aaaaggagag
tgtctggttc tgagccatct 5520ggctgcctgg actgcaagaa tggctggggg agggagggta
ggagggagag taggagggag 5580agtgagagga gagcagtttt catgctcctg agatcttgag
aaggtgtgct tcctgaactg 5640ccctaggctc caccactgaa gtagaggcag gggtgggtgg
agaaggggtg aaggctggct 5700gctcataccc tttctctttg cccccctctc ccatctctat
agagtggacc tggttgttca 5760ctccttgaag gacctgccca ctgtgcttcc tcctggcttc
accatcggag ccatctgcaa 5820gtaagagtct tgcaagtaag gggcttgggc aggggtaggc
atcatgtgaa cctttgcctt 5880tccctttggg gcctgaccct ctgcttcagg gttatctcct
ctgccctgag gagtgttgac 5940tggtggcaga aaactcaaga aataccagtg agttggcaat
cgagagagaa tagaggtgat 6000ctgaacttaa atctcttccc tcattctgtg cccttccctc
ctcccccagg cgggaaaacc 6060ctcatgatgc tgttgtcttt cacccaaaat ttgttgggaa
gaccctagaa accctgccag 6120agaagaggta agtggggcct ggataggcag cttggtggga
tgtgcccaga agatgcaggg 6180atgggaggag gaggaaagga acagtgactg cctagtgtta
aaatctcatt gtaacttctc 6240tctgggcagt gtggtgggaa ccagctccct gcgaagagca
gcccagctgc agagaaagtt 6300cccgcatctg gagttcagga gtattgtatc cttttagaag
agtgacggat ccttttggaa 6360gagtgacgga gacagcagcc aaggaaaaag acaaggtcta
gagggctctg ggagtccgga 6420gagtggaagg ggcttccagc aagcagcccg tggggtcagt
ggcctgtctg tctttccatg 6480cactcatccg tccactcatt tacagtctaa tgttttctta
gccccagaca agtgttcaga 6540gtgcaaggca ttggggataa tggtgagcaa gataaacatt
cccctgcata tgtagagttt 6600acgtcttact tagggataat gcagttatac tgaactgaat
agtgactact tctggaggga 6660tagggagtac ttcctttttt tttttttttt tttctgagac
ggagtctcgc tctgttgccc 6720aggttggagt gcagtggcgc aatctaggct cactgcaact
tctgcctcct gagttcaagc 6780aatcttcctg cctcagcctc ctaagtagtt gggattacag
gtgccaccac acctggctaa 6840tttttgtatt tttagtagag actgggtttc accatgttag
tcaggctggt ctcaaactcc 6900tgacctcagg tgatccacca gcctcggcct cccaaagggc
tgggattaca ggcttgagcc 6960ccgcacccgg tcagtacttc catttttata tgctactata
ttgtcttgac ttttacaatg 7020aatatgtagt acatttcata aaactaaatt taaaaatagt
atgtgctaag tgctccaata 7080agtgaagttg ggaattttct ggaaacttct agttggaaca
tctaaacaca gaagtctggg 7140gtgtcaggga aggtttctca gaggtcttgt aaccttggca
agttatttag cctccctatg 7200tcattttcct tatctgtaaa gtggggataa taatactacc
ttcctcacag ggttgttgtg 7260aagatgaaat gagctgacat atggaaagta cttttagagc
agtgtctggc atgtagtaag 7320tatgatgtaa ctgttagctg ttaacattaa gctgagagct
ggaagatgac tgaaagtcag 7380ccagctagag agggaaagac agactcaggc agagggaacc
gcacgaggcc ccagattgcc 7440cgacactgtg gtccttagca actctccaca gcggggaaac
ctcaacaccc ggcttcggaa 7500gatggacgag cagcaggagt tcagtgccat catcctggca
acagctggcc tgcagcgcat 7560gggctggcac aaccgggttg ggcaggtagg gcctgcccct
atcctctccc cagctcatct 7620gcatctcctt tctgccttac agtcatcccc aatttaggat
ttttagactt tatgattgtg 7680tgaaagcgat atacgttcag tagaaactgt acttagtacc
catacagcca ttctgttttt 7740tactttcagt acagtattca ttacatgaga tattcacttt
attgtaaaac aggcttggtg 7800tcagatgatt ttgtccaact ataataggct aatcttaagt
gttctgagca catgtaaggt 7860aggctaggtg tattaaatgc attttcagct tgttttcaac
ttaacaatgg gtttatcagg 7920atgtaaccct attgtaagtc aaggaccatc tgtcttcact
tcttgaccac cccacctcta 7980acaccgtagg ctgggaagat tgtgaatcag aggccagact
ctaggctttc atggagaaaa 8040tttacaaaaa aaaaaaaaag aggccagact cacacttagg
cctacccagg ctttctagat 8100gatagggaac tcccatctca ctgccaggtg cttttagaca
cccccgtgtc cacccttttg 8160actccctgtt ccgcctccac agatcctgca ccctgaggaa
tgcatgtatg ctgtgggcca 8220ggtacacttg accagggaag ccacatggtg acatatgcct
tccctttgtt ctcaaccaag 8280aagcttgtct cacaaccttc tgcatctgct tccccagaat
agcattctca gggaggggca 8340gaccttggga tgctaccggt ccaaaaggcg ctggggagca
agtagataga ggtggtccca 8400tgctttgcgc cattggttgg ggaaagatca ggcctgatgt
cctaggatgt ttttccatca 8460gggggccttg ggcgtggaag tgcgagccaa ggaccaggac
atcttggatc tggtgggtgt 8520gctgcacgat cccgagactc tgcttcgctg catcgctgaa
agggccttcc tgaggcacct 8580ggtagggcct gtgctccacc tgtggagggc tggggacttg
gagagctggg aaaggtggca 8640gggaagattt cttacatgaa tgctctgtat acagtgctaa
ctcattcttg ttgaatgttg 8700tgtatggata ggaccaggtc tgggcccaca gttgcctttt
cagtgatgtc ctcaggtctg 8760tggtcacagg gtggtgttaa gagcccttgc agctcacaag
aacttcttgt tacaggaagg 8820aggctgcagt gtgccagtag ccgtgcatac agctatgaag
gatgggcaag taagtggggg 8880gaaatgggcg ggaagccagg gaaaggagga ctgtggcatt
tcttcctgtg catcccaggt 8940ttctaggtag tcccctctca gactgtgctg aggcaactgt
tttcttcccc agctgtacct 9000gactggagga gtctggagtc tagacggctc agatagcata
caagagacca tgcaggctac 9060catccatgtc cctgcccagg taccaaagct ggagggcgag
ggggtaataa acaagagtgc 9120atataatctc ttgttctcac caaatcccac ctccttccct
catacagcat gaagatggcc 9180ctgaggatga cccacagttg gtaggcatca ctgctcgtaa
cattccacga gggccccagt 9240tggctgccca gaacttgggc atcagcctgg ccaacttgtt
gctgagcaaa ggagccaaaa 9300acatcctgga tgttgcacgg cagcttaacg atgcccatta
actggtttgt ggggcacaga 9360tgcctgggtt gctgctgtcc agtgcctaca tcccgggcct
cagtgcccca ttctcactgc 9420tatctgggga gtgattaccc cgggagactg aactgcaggg
ttcaagcctt ccagggattt 9480gcctcacctt ggggccttga tgactgcctt gcctcctcag
tatgtggggg cttcatctct 9540ttagagaagt ccaagcaaca gcctttgaat gtaaccaatc
ctactaataa accagttctg 9600aaggtgttgt gtgtgcgcgt gtggagttgg cgggaagata
ggaacaaaca caaagccctt 9660tcatccttac ctcagaggct gggacttttg cccagagttc
tcctggtacg tcctttctgc 9720ttctgcctca atagttttca tttcacacag aataaattgt
ctcccaggaa caccaagaaa 9780cagagccaca atcttaaatt cctatggttt gccccttcag
ttaacagtag agcctgttta 9840tattgcatgg cccctcccac ccctattatc aggaaagtat
agaaagtcac taattctaca 9900actctcttgc aaaatgaaaa caaatgctcc atttaaaaaa
aaaacaatcc tttaataaaa 9960ttagtccatc taaaactccc caatgcctaa ggttctagtc
gtggaagggt tagctgcaga 10020attc
1002414361PRTHomo sapiens 14Met Ser Gly Asn Gly Asn
Ala Ala Ala Thr Ala Glu Glu Asn Ser Pro 1 5
10 15 Lys Met Arg Val Ile Arg Val Gly Thr Arg Lys
Ser Gln Leu Ala Arg 20 25
30 Ile Gln Thr Asp Ser Val Val Ala Thr Leu Lys Ala Ser Tyr Pro
Gly 35 40 45 Leu
Gln Phe Glu Ile Ile Ala Met Ser Thr Thr Gly Asp Lys Ile Leu 50
55 60 Asp Thr Ala Leu Ser Lys
Ile Gly Glu Lys Ser Leu Phe Thr Lys Glu 65 70
75 80 Leu Glu His Ala Leu Glu Lys Asn Glu Val Asp
Leu Val Val His Ser 85 90
95 Leu Lys Asp Leu Pro Thr Val Leu Pro Pro Gly Phe Thr Ile Gly Ala
100 105 110 Ile Cys
Lys Arg Glu Asn Pro His Asp Ala Val Val Phe His Pro Lys 115
120 125 Phe Val Gly Lys Thr Leu Glu
Thr Leu Pro Glu Lys Ser Val Val Gly 130 135
140 Thr Ser Ser Leu Arg Arg Ala Ala Gln Leu Gln Arg
Lys Phe Pro His 145 150 155
160 Leu Glu Phe Arg Ser Ile Arg Gly Asn Leu Asn Thr Arg Leu Arg Lys
165 170 175 Met Asp Glu
Gln Gln Glu Phe Ser Ala Ile Ile Leu Ala Thr Ala Gly 180
185 190 Leu Gln Arg Met Gly Trp His Asn
Arg Val Gly Gln Ile Leu His Pro 195 200
205 Glu Glu Cys Met Tyr Ala Val Gly Gln Gly Ala Leu Gly
Val Glu Val 210 215 220
Arg Ala Lys Asp Gln Asp Ile Leu Asp Leu Val Gly Val Leu His Asp 225
230 235 240 Pro Glu Thr Leu
Leu Arg Cys Ile Ala Glu Arg Ala Phe Leu Arg His 245
250 255 Leu Glu Gly Gly Cys Ser Val Pro Val
Ala Val His Thr Ala Met Lys 260 265
270 Asp Gly Gln Leu Tyr Leu Thr Gly Gly Val Trp Ser Leu Asp
Gly Ser 275 280 285
Asp Ser Ile Gln Glu Thr Met Gln Ala Thr Ile His Val Pro Ala Gln 290
295 300 His Glu Asp Gly Pro
Glu Asp Asp Pro Gln Leu Val Gly Ile Thr Ala 305 310
315 320 Arg Asn Ile Pro Arg Gly Pro Gln Leu Ala
Ala Gln Asn Leu Gly Ile 325 330
335 Ser Leu Ala Asn Leu Leu Leu Ser Lys Gly Ala Lys Asn Ile Leu
Asp 340 345 350 Val
Ala Arg Gln Leu Asn Asp Ala His 355 360
15344PRTHomo sapiens 15Met Arg Val Ile Arg Val Gly Thr Arg Lys Ser Gln
Leu Ala Arg Ile 1 5 10
15 Gln Thr Asp Ser Val Val Ala Thr Leu Lys Ala Ser Tyr Pro Gly Leu
20 25 30 Gln Phe Glu
Ile Ile Ala Met Ser Thr Thr Gly Asp Lys Ile Leu Asp 35
40 45 Thr Ala Leu Ser Lys Ile Gly Glu
Lys Ser Leu Phe Thr Lys Glu Leu 50 55
60 Glu His Ala Leu Glu Lys Asn Glu Val Asp Leu Val Val
His Ser Leu 65 70 75
80 Lys Asp Leu Pro Thr Val Leu Pro Pro Gly Phe Thr Ile Gly Ala Ile
85 90 95 Cys Lys Arg Glu
Asn Pro His Asp Ala Val Val Phe His Pro Lys Phe 100
105 110 Val Gly Lys Thr Leu Glu Thr Leu Pro
Glu Lys Ser Val Val Gly Thr 115 120
125 Ser Ser Leu Arg Arg Ala Ala Gln Leu Gln Arg Lys Phe Pro
His Leu 130 135 140
Glu Phe Arg Ser Ile Arg Gly Asn Leu Asn Thr Arg Leu Arg Lys Met 145
150 155 160 Asp Glu Gln Gln Glu
Phe Ser Ala Ile Ile Leu Ala Thr Ala Gly Leu 165
170 175 Gln Arg Met Gly Trp His Asn Arg Val Gly
Gln Ile Leu His Pro Glu 180 185
190 Glu Cys Met Tyr Ala Val Gly Gln Gly Ala Leu Gly Val Glu Val
Arg 195 200 205 Ala
Lys Asp Gln Asp Ile Leu Asp Leu Val Gly Val Leu His Asp Pro 210
215 220 Glu Thr Leu Leu Arg Cys
Ile Ala Glu Arg Ala Phe Leu Arg His Leu 225 230
235 240 Glu Gly Gly Cys Ser Val Pro Val Ala Val His
Thr Ala Met Lys Asp 245 250
255 Gly Gln Leu Tyr Leu Thr Gly Gly Val Trp Ser Leu Asp Gly Ser Asp
260 265 270 Ser Ile
Gln Glu Thr Met Gln Ala Thr Ile His Val Pro Ala Gln His 275
280 285 Glu Asp Gly Pro Glu Asp Asp
Pro Gln Leu Val Gly Ile Thr Ala Arg 290 295
300 Asn Ile Pro Arg Gly Pro Gln Leu Ala Ala Gln Asn
Leu Gly Ile Ser 305 310 315
320 Leu Ala Asn Leu Leu Leu Ser Lys Gly Ala Lys Asn Ile Leu Asp Val
325 330 335 Ala Arg Gln
Leu Asn Asp Ala His 340 162022DNAHomo sapiens
16ccggtaccgg ctcctcctgg gctccctcta gcgccttccc cccggcccga ctgcctggtc
60agcgccaagt gacttacgcc cccgaccctg agcccggacc gctaggcgag gaggatcaga
120tctccgctcg agaatctgaa ggtgccctgg tcctggagga gttccgtccc agccctgcgg
180tctcccggta ctgctcgccc cggccctctg gagcttcagg aggcggccgt cagggtcggg
240gagtatttgg gtccggggtc tcagggaagg gcggcgcctg ggtctgcggt atcggaaaga
300gcctgctgga gccaagtagc cctccctctc ttgggacaga cccctcggtc ccatgtccat
360gggggcaccg cggtccctcc tcctggccct ggctgctggc ctggccgttg cccgtccgcc
420caacatcgtg ctgatctttg ccgacgacct cggctatggg gacctgggct gctatgggca
480ccccagctct accactccca acctggacca gctggcggcg ggagggctgc ggttcacaga
540cttctacgtg cctgtgtctc tgtgcacacc ctctagggcc gccctcctga ccggccggct
600cccggttcgg atgggcatgt accctggcgt cctggtgccc agctcccggg ggggcctgcc
660cctggaggag gtgaccgtgg ccgaagtcct ggctgcccga ggctacctca caggaatggc
720cggcaagtgg caccttgggg tggggcctga gggggccttc ctgccccccc atcagggctt
780ccatcgattt ctaggcatcc cgtactccca cgaccagggc ccctgccaga acctgacctg
840cttcccgccg gccactcctt gcgacggtgg ctgtgaccag ggcctggtcc ccatcccact
900gttggccaac ctgtccgtgg aggcgcagcc cccctggctg cccggactag aggcccgcta
960catggctttc gcccatgacc tcatggccga cgcccagcgc caggatcgcc ccttcttcct
1020gtactatgcc tctcaccaca cccactaccc tcagttcagt gggcagagct ttgcagagcg
1080ttcaggccgc gggccatttg gggactccct gatggagctg gatgcagctg tggggaccct
1140gatgacagcc ataggggacc tggggctgct tgaagagacg ctggtcatct tcactgcaga
1200caatggacct gagaccatgc gtatgtcccg aggcggctgc tccggtctct tgcggtgtgg
1260aaagggaacg acctacgagg gcggtgtccg agagcctgcc ttggccttct ggccaggtca
1320tatcgctccc ggcgtgaccc acgagctggc cagctccctg gacctgctgc ctaccctggc
1380agccctggct ggggccccac tgcccaatgt caccttggat ggctttgacc tcagccccct
1440gctgctgggc acaggcaaga gccctcggca gtctctcttc ttctacccgt cctacccaga
1500cgaggtccgt ggggtttttg ctgtgcggac tggaaagtac aaggctcact tcttcaccca
1560gggctctgcc cacagtgata ccactgcaga ccctgcctgc cacgcctcca gctctctgac
1620tgctcatgag cccccgctgc tctatgacct gtccaaggac cctggtgaga actacaacct
1680gctggggggt gtggccgggg ccaccccaga ggtgctgcaa gccctgaaac agcttcagct
1740gctcaaggcc cagttagacg cagctgtgac cttcggcccc agccaggtgg cccggggcga
1800ggaccccgcc ctgcagatct gctgtcatcc tggctgcacc ccccgcccag cttgctgcca
1860ttgcccagat ccccatgcct gagggcccct cggctggcct gggcatgtga tggctcctca
1920ctgggagcct gtgggggagg ctcaggtgtc tggagggggt ttgtgcctga taacgtaata
1980acaccagtgg agacttgcac atctgaaaaa aaaaaaaaaa aa
2022171524DNAHomo sapiens 17atgggggcac cgcggtccct cctcctggcc ctggctgctg
gcctggccgt tgcacgtccg 60cccaacatcg tgctgatctt tgccgacgac ctcggctatg
gggacctggg ctgctatggg 120caccccagct ctaccactcc caacctggac cagctggcgg
cgggagggct gcggttcaca 180gacttctacg tgcctgtgtc tctgtgcaca ccctctaggg
ccgccctcct gaccggccgg 240ctcccggttc ggatgggcat gtaccctggc gtcctggtgc
ccagctcccg ggggggcctg 300cccctggagg aggtgaccgt ggccgaagtc ctggctgccc
gaggctacct cacaggaatg 360gccggcaagt ggcaccttgg ggtggggcct gagggggcct
tcctgccccc ccatcagggc 420ttccatcgat ttctaggcat cccgtactcc cacgaccagg
gcccctgcca gaacctgacc 480tgcttcccgc cggccactcc ttgcgacggt ggctgtgacc
agggcctggt ccccatccca 540ctgttggcca acctgtccgt ggaggcgcag cccccctggc
tgcccggact agaggcccgc 600tacatggctt tcgcccatga cctcatggcc gacgcccagc
gccaggatcg ccccttcttc 660ctgtactatg cctctcacca cacccactac cctcagttca
gtgggcagag ctttgcagag 720cgttcaggcc gcgggccatt tggggactcc ctgatggagc
tggatgcagc tgtggggacc 780ctgatgacag ccatagggga cctggggctg cttgaagaga
cgctggtcat cttcactgca 840gacaatggac ctgagaccat gcgtatgtcc cgaggcggct
gctccggtct cttgcggtgt 900ggaaagggaa cgacctacga gggcggtgtc cgagagcctg
ccttggcctt ctggccaggt 960catatcgctc ccggcgtgac ccacgagctg gccagctccc
tggacctgct gcctaccctg 1020gcagccctgg ctggggcccc actgcccaat gtcaccttgg
atggctttga cctcagcccc 1080ctgctgctgg gcacaggcaa gagccctcgg cagtctctct
tcttctaccc gtcctaccca 1140gacgaggtcc gtggggtttt tgctgtgcgg actggaaagt
acaaggctca cttcttcacc 1200cagggctctg cccacagtga taccactgca gaccctgcct
gccacgcctc cagctctctg 1260actgctcatg agcccccgct gctctatgac ctgtccaagg
accctggtga gaactacaac 1320ctgctggggg gtgtggccgg ggccacccca gaggtgctgc
aagccctgaa acagcttcag 1380ctgctcaagg cccagttaga cgcagctgtg accttcggcc
ccagccaggt ggcccggggc 1440gaggaccccg ccctgcagat ctgctgtcat cctggctgca
ccccccgccc agcttgctgc 1500cattgcccag atccccatgc ctga
152418507PRTHomo sapiens 18Met Gly Ala Pro Arg Ser
Leu Leu Leu Ala Leu Ala Ala Gly Leu Ala 1 5
10 15 Val Ala Arg Pro Pro Asn Ile Val Leu Ile Phe
Ala Asp Asp Leu Gly 20 25
30 Tyr Gly Asp Leu Gly Cys Tyr Gly His Pro Ser Ser Thr Thr Pro
Asn 35 40 45 Leu
Asp Gln Leu Ala Ala Gly Gly Leu Arg Phe Thr Asp Phe Tyr Val 50
55 60 Pro Val Ser Leu Cys Thr
Pro Ser Arg Ala Ala Leu Leu Thr Gly Arg 65 70
75 80 Leu Pro Val Arg Met Gly Met Tyr Pro Gly Val
Leu Val Pro Ser Ser 85 90
95 Arg Gly Gly Leu Pro Leu Glu Glu Val Thr Val Ala Glu Val Leu Ala
100 105 110 Ala Arg
Gly Tyr Leu Thr Gly Met Ala Gly Lys Trp His Leu Gly Val 115
120 125 Gly Pro Glu Gly Ala Phe Leu
Pro Pro His Gln Gly Phe His Arg Phe 130 135
140 Leu Gly Ile Pro Tyr Ser His Asp Gln Gly Pro Cys
Gln Asn Leu Thr 145 150 155
160 Cys Phe Pro Pro Ala Thr Pro Cys Asp Gly Gly Cys Asp Gln Gly Leu
165 170 175 Val Pro Ile
Pro Leu Leu Ala Asn Leu Ser Val Glu Ala Gln Pro Pro 180
185 190 Trp Leu Pro Gly Leu Glu Ala Arg
Tyr Met Ala Phe Ala His Asp Leu 195 200
205 Met Ala Asp Ala Gln Arg Gln Asp Arg Pro Phe Phe Leu
Tyr Tyr Ala 210 215 220
Ser His His Thr His Tyr Pro Gln Phe Ser Gly Gln Ser Phe Ala Glu 225
230 235 240 Arg Ser Gly Arg
Gly Pro Phe Gly Asp Ser Leu Met Glu Leu Asp Ala 245
250 255 Ala Val Gly Thr Leu Met Thr Ala Ile
Gly Asp Leu Gly Leu Leu Glu 260 265
270 Glu Thr Leu Val Ile Phe Thr Ala Asp Asn Gly Pro Glu Thr
Met Arg 275 280 285
Met Ser Arg Gly Gly Cys Ser Gly Leu Leu Arg Cys Gly Lys Gly Thr 290
295 300 Thr Tyr Glu Gly Gly
Val Arg Glu Pro Ala Leu Ala Phe Trp Pro Gly 305 310
315 320 His Ile Ala Pro Gly Val Thr His Glu Leu
Ala Ser Ser Leu Asp Leu 325 330
335 Leu Pro Thr Leu Ala Ala Leu Ala Gly Ala Pro Leu Pro Asn Val
Thr 340 345 350 Leu
Asp Gly Phe Asp Leu Ser Pro Leu Leu Leu Gly Thr Gly Lys Ser 355
360 365 Pro Arg Gln Ser Leu Phe
Phe Tyr Pro Ser Tyr Pro Asp Glu Val Arg 370 375
380 Gly Val Phe Ala Val Arg Thr Gly Lys Tyr Lys
Ala His Phe Phe Thr 385 390 395
400 Gln Gly Ser Ala His Ser Asp Thr Thr Ala Asp Pro Ala Cys His Ala
405 410 415 Ser Ser
Ser Leu Thr Ala His Glu Pro Pro Leu Leu Tyr Asp Leu Ser 420
425 430 Lys Asp Pro Gly Glu Asn Tyr
Asn Leu Leu Gly Gly Val Ala Gly Ala 435 440
445 Thr Pro Glu Val Leu Gln Ala Leu Lys Gln Leu Gln
Leu Leu Lys Ala 450 455 460
Gln Leu Asp Ala Ala Val Thr Phe Gly Pro Ser Gln Val Ala Arg Gly 465
470 475 480 Glu Asp Pro
Ala Leu Gln Ile Cys Cys His Pro Gly Cys Thr Pro Arg 485
490 495 Pro Ala Cys Cys His Cys Pro Asp
Pro His Ala 500 505 19489PRTHomo
sapiensMOD_RES(51)..(51)C-alpha Formylglycine 19Arg Pro Pro Asn Ile Val
Leu Ile Phe Ala Asp Asp Leu Gly Tyr Gly 1 5
10 15 Asp Leu Gly Cys Tyr Gly His Pro Ser Ser Thr
Thr Pro Asn Leu Asp 20 25
30 Gln Leu Ala Ala Gly Gly Leu Arg Phe Thr Asp Phe Tyr Val Pro
Val 35 40 45 Ser
Leu Xaa Thr Pro Ser Arg Ala Ala Leu Leu Thr Gly Arg Leu Pro 50
55 60 Val Arg Met Gly Met Tyr
Pro Gly Val Leu Val Pro Ser Ser Arg Gly 65 70
75 80 Gly Leu Pro Leu Glu Glu Val Thr Val Ala Glu
Val Leu Ala Ala Arg 85 90
95 Gly Tyr Leu Thr Gly Met Ala Gly Lys Trp His Leu Gly Val Gly Pro
100 105 110 Glu Gly
Ala Phe Leu Pro Pro His Gln Gly Phe His Arg Phe Leu Gly 115
120 125 Ile Pro Tyr Ser His Asp Gln
Gly Pro Cys Gln Asn Leu Thr Cys Phe 130 135
140 Pro Pro Ala Thr Pro Cys Asp Gly Gly Cys Asp Gln
Gly Leu Val Pro 145 150 155
160 Ile Pro Leu Leu Ala Asn Leu Ser Val Glu Ala Gln Pro Pro Trp Leu
165 170 175 Pro Gly Leu
Glu Ala Arg Tyr Met Ala Phe Ala His Asp Leu Met Ala 180
185 190 Asp Ala Gln Arg Gln Asp Arg Pro
Phe Phe Leu Tyr Tyr Ala Ser His 195 200
205 His Thr His Tyr Pro Gln Phe Ser Gly Gln Ser Phe Ala
Glu Arg Ser 210 215 220
Gly Arg Gly Pro Phe Gly Asp Ser Leu Met Glu Leu Asp Ala Ala Val 225
230 235 240 Gly Thr Leu Met
Thr Ala Ile Gly Asp Leu Gly Leu Leu Glu Glu Thr 245
250 255 Leu Val Ile Phe Thr Ala Asp Asn Gly
Pro Glu Thr Met Arg Met Ser 260 265
270 Arg Gly Gly Cys Ser Gly Leu Leu Arg Cys Gly Lys Gly Thr
Thr Tyr 275 280 285
Glu Gly Gly Val Arg Glu Pro Ala Leu Ala Phe Trp Pro Gly His Ile 290
295 300 Ala Pro Gly Val Thr
His Glu Leu Ala Ser Ser Leu Asp Leu Leu Pro 305 310
315 320 Thr Leu Ala Ala Leu Ala Gly Ala Pro Leu
Pro Asn Val Thr Leu Asp 325 330
335 Gly Phe Asp Leu Ser Pro Leu Leu Leu Gly Thr Gly Lys Ser Pro
Arg 340 345 350 Gln
Ser Leu Phe Phe Tyr Pro Ser Tyr Pro Asp Glu Val Arg Gly Val 355
360 365 Phe Ala Val Arg Thr Gly
Lys Tyr Lys Ala His Phe Phe Thr Gln Gly 370 375
380 Ser Ala His Ser Asp Thr Thr Ala Asp Pro Ala
Cys His Ala Ser Ser 385 390 395
400 Ser Leu Thr Ala His Glu Pro Pro Leu Leu Tyr Asp Leu Ser Lys Asp
405 410 415 Pro Gly
Glu Asn Tyr Asn Leu Leu Gly Gly Val Ala Gly Ala Thr Pro 420
425 430 Glu Val Leu Gln Ala Leu Lys
Gln Leu Gln Leu Leu Lys Ala Gln Leu 435 440
445 Asp Ala Ala Val Thr Phe Gly Pro Ser Gln Val Ala
Arg Gly Glu Asp 450 455 460
Pro Ala Leu Gln Ile Cys Cys His Pro Gly Cys Thr Pro Arg Pro Ala 465
470 475 480 Cys Cys His
Cys Pro Asp Pro His Ala 485 20489PRTHomo
sapiens 20Arg Pro Pro Asn Ile Val Leu Ile Phe Ala Asp Asp Leu Gly Tyr Gly
1 5 10 15 Asp Leu
Gly Cys Tyr Gly His Pro Ser Ser Thr Thr Pro Asn Leu Asp 20
25 30 Gln Leu Ala Ala Gly Gly Leu
Arg Phe Thr Asp Phe Tyr Val Pro Val 35 40
45 Ser Leu Cys Thr Pro Ser Arg Ala Ala Leu Leu Thr
Gly Arg Leu Pro 50 55 60
Val Arg Met Gly Met Tyr Pro Gly Val Leu Val Pro Ser Ser Arg Gly 65
70 75 80 Gly Leu Pro
Leu Glu Glu Val Thr Val Ala Glu Val Leu Ala Ala Arg 85
90 95 Gly Tyr Leu Thr Gly Met Ala Gly
Lys Trp His Leu Gly Val Gly Pro 100 105
110 Glu Gly Ala Phe Leu Pro Pro His Gln Gly Phe His Arg
Phe Leu Gly 115 120 125
Ile Pro Tyr Ser His Asp Gln Gly Pro Cys Gln Asn Leu Thr Cys Phe 130
135 140 Pro Pro Ala Thr
Pro Cys Asp Gly Gly Cys Asp Gln Gly Leu Val Pro 145 150
155 160 Ile Pro Leu Leu Ala Asn Leu Ser Val
Glu Ala Gln Pro Pro Trp Leu 165 170
175 Pro Gly Leu Glu Ala Arg Tyr Met Ala Phe Ala His Asp Leu
Met Ala 180 185 190
Asp Ala Gln Arg Gln Asp Arg Pro Phe Phe Leu Tyr Tyr Ala Ser His
195 200 205 His Thr His Tyr
Pro Gln Phe Ser Gly Gln Ser Phe Ala Glu Arg Ser 210
215 220 Gly Arg Gly Pro Phe Gly Asp Ser
Leu Met Glu Leu Asp Ala Ala Val 225 230
235 240 Gly Thr Leu Met Thr Ala Ile Gly Asp Leu Gly Leu
Leu Glu Glu Thr 245 250
255 Leu Val Ile Phe Thr Ala Asp Asn Gly Pro Glu Thr Met Arg Met Ser
260 265 270 Arg Gly Gly
Cys Ser Gly Leu Leu Arg Cys Gly Lys Gly Thr Thr Tyr 275
280 285 Glu Gly Gly Val Arg Glu Pro Ala
Leu Ala Phe Trp Pro Gly His Ile 290 295
300 Ala Pro Gly Val Thr His Glu Leu Ala Ser Ser Leu Asp
Leu Leu Pro 305 310 315
320 Thr Leu Ala Ala Leu Ala Gly Ala Pro Leu Pro Asn Val Thr Leu Asp
325 330 335 Gly Phe Asp Leu
Ser Pro Leu Leu Leu Gly Thr Gly Lys Ser Pro Arg 340
345 350 Gln Ser Leu Phe Phe Tyr Pro Ser Tyr
Pro Asp Glu Val Arg Gly Val 355 360
365 Phe Ala Val Arg Thr Gly Lys Tyr Lys Ala His Phe Phe Thr
Gln Gly 370 375 380
Ser Ala His Ser Asp Thr Thr Ala Asp Pro Ala Cys His Ala Ser Ser 385
390 395 400 Ser Leu Thr Ala His
Glu Pro Pro Leu Leu Tyr Asp Leu Ser Lys Asp 405
410 415 Pro Gly Glu Asn Tyr Asn Leu Leu Gly Gly
Val Ala Gly Ala Thr Pro 420 425
430 Glu Val Leu Gln Ala Leu Lys Gln Leu Gln Leu Leu Lys Ala Gln
Leu 435 440 445 Asp
Ala Ala Val Thr Phe Gly Pro Ser Gln Val Ala Arg Gly Glu Asp 450
455 460 Pro Ala Leu Gln Ile Cys
Cys His Pro Gly Cys Thr Pro Arg Pro Ala 465 470
475 480 Cys Cys His Cys Pro Asp Pro His Ala
485 211011PRTHomo sapiens 21Met Gly Ala Tyr Ala
Arg Ala Ser Gly Val Cys Ala Arg Gly Cys Leu 1 5
10 15 Asp Ser Ala Gly Pro Trp Thr Met Ser Arg
Ala Leu Arg Pro Pro Leu 20 25
30 Pro Pro Leu Cys Phe Phe Leu Leu Leu Leu Ala Ala Ala Gly Ala
Arg 35 40 45 Ala
Gly Gly Tyr Glu Thr Cys Pro Thr Val Gln Pro Asn Met Leu Asn 50
55 60 Val His Leu Leu Pro His
Thr His Asp Asp Val Gly Trp Leu Lys Thr 65 70
75 80 Val Asp Gln Tyr Phe Tyr Gly Ile Lys Asn Asp
Ile Gln His Ala Gly 85 90
95 Val Gln Tyr Ile Leu Asp Ser Val Ile Ser Ala Leu Leu Ala Asp Pro
100 105 110 Thr Arg
Arg Phe Ile Tyr Val Glu Ile Ala Phe Phe Ser Arg Trp Trp 115
120 125 His Gln Gln Thr Asn Ala Thr
Gln Glu Val Val Arg Asp Leu Val Arg 130 135
140 Gln Gly Arg Leu Glu Phe Ala Asn Gly Gly Trp Val
Met Asn Asp Glu 145 150 155
160 Ala Ala Thr His Tyr Gly Ala Ile Val Asp Gln Met Thr Leu Gly Leu
165 170 175 Arg Phe Leu
Glu Asp Thr Phe Gly Asn Asp Gly Arg Pro Arg Val Ala 180
185 190 Trp His Ile Asp Pro Phe Gly His
Ser Arg Glu Gln Ala Ser Leu Phe 195 200
205 Ala Gln Met Gly Phe Asp Gly Phe Phe Phe Gly Arg Leu
Asp Tyr Gln 210 215 220
Asp Lys Trp Val Arg Met Gln Lys Leu Glu Met Glu Gln Val Trp Arg 225
230 235 240 Ala Ser Thr Ser
Leu Lys Pro Pro Thr Ala Asp Leu Phe Thr Gly Val 245
250 255 Leu Pro Asn Gly Tyr Asn Pro Pro Arg
Asn Leu Cys Trp Asp Val Leu 260 265
270 Cys Val Asp Gln Pro Leu Val Glu Asp Pro Arg Ser Pro Glu
Tyr Asn 275 280 285
Ala Lys Glu Leu Val Asp Tyr Phe Leu Asn Val Ala Thr Ala Gln Gly 290
295 300 Arg Tyr Tyr Arg Thr
Asn His Thr Val Met Thr Met Gly Ser Asp Phe 305 310
315 320 Gln Tyr Glu Asn Ala Asn Met Trp Phe Lys
Asn Leu Asp Lys Leu Ile 325 330
335 Arg Leu Val Asn Ala Gln Gln Ala Lys Gly Ser Ser Val His Val
Leu 340 345 350 Tyr
Ser Thr Pro Ala Cys Tyr Leu Trp Glu Leu Asn Lys Ala Asn Leu 355
360 365 Thr Trp Ser Val Lys His
Asp Asp Phe Phe Pro Tyr Ala Asp Gly Pro 370 375
380 His Gln Phe Trp Thr Gly Tyr Phe Ser Ser Arg
Pro Ala Leu Lys Arg 385 390 395
400 Tyr Glu Arg Leu Ser Tyr Asn Phe Leu Gln Val Cys Asn Gln Leu Glu
405 410 415 Ala Leu
Val Gly Leu Ala Ala Asn Val Gly Pro Tyr Gly Ser Gly Asp 420
425 430 Ser Ala Pro Leu Asn Glu Ala
Met Ala Val Leu Gln His His Asp Ala 435 440
445 Val Ser Gly Thr Ser Arg Gln His Val Ala Asn Asp
Tyr Ala Arg Gln 450 455 460
Leu Ala Ala Gly Trp Gly Pro Cys Glu Val Leu Leu Ser Asn Ala Leu 465
470 475 480 Ala Arg Leu
Arg Gly Phe Lys Asp His Phe Thr Phe Cys Gln Gln Leu 485
490 495 Asn Ile Ser Ile Cys Pro Leu Ser
Gln Thr Ala Ala Arg Phe Gln Val 500 505
510 Ile Val Tyr Asn Pro Leu Gly Arg Lys Val Asn Trp Met
Val Arg Leu 515 520 525
Pro Val Ser Glu Gly Val Phe Val Val Lys Asp Pro Asn Gly Arg Thr 530
535 540 Val Pro Ser Asp
Val Val Ile Phe Pro Ser Ser Asp Ser Gln Ala His 545 550
555 560 Pro Pro Glu Leu Leu Phe Ser Ala Ser
Leu Pro Ala Leu Gly Phe Ser 565 570
575 Thr Tyr Ser Val Ala Gln Val Pro Arg Trp Lys Pro Gln Ala
Arg Ala 580 585 590
Pro Gln Pro Ile Pro Arg Arg Ser Trp Ser Pro Ala Leu Thr Ile Glu
595 600 605 Asn Glu His Ile
Arg Ala Thr Phe Asp Pro Asp Thr Gly Leu Leu Met 610
615 620 Glu Ile Met Asn Met Asn Gln Gln
Leu Leu Leu Pro Val Arg Gln Thr 625 630
635 640 Phe Phe Trp Tyr Asn Ala Ser Ile Gly Asp Asn Glu
Ser Asp Gln Ala 645 650
655 Ser Gly Ala Tyr Ile Phe Arg Pro Asn Gln Gln Lys Pro Leu Pro Val
660 665 670 Ser Arg Trp
Ala Gln Ile His Leu Val Lys Thr Pro Leu Val Gln Glu 675
680 685 Val His Gln Asn Phe Ser Ala Trp
Cys Ser Gln Val Val Arg Leu Tyr 690 695
700 Pro Gly Gln Arg His Leu Glu Leu Glu Trp Ser Val Gly
Pro Ile Pro 705 710 715
720 Val Gly Asp Thr Trp Gly Lys Glu Val Ile Ser Arg Phe Asp Thr Pro
725 730 735 Leu Glu Thr Lys
Gly Arg Phe Tyr Thr Asp Ser Asn Gly Arg Glu Ile 740
745 750 Leu Glu Arg Arg Arg Asp Tyr Arg Pro
Thr Trp Lys Leu Asn Gln Thr 755 760
765 Glu Pro Val Ala Gly Asn Tyr Tyr Pro Val Asn Thr Arg Ile
Tyr Ile 770 775 780
Thr Asp Gly Asn Met Gln Leu Thr Val Leu Thr Asp Arg Ser Gln Gly 785
790 795 800 Gly Ser Ser Leu Arg
Asp Gly Ser Leu Glu Leu Met Val His Arg Arg 805
810 815 Leu Leu Lys Asp Asp Gly Arg Gly Val Ser
Glu Pro Leu Met Glu Asn 820 825
830 Gly Ser Gly Ala Trp Val Arg Gly Arg His Leu Val Leu Leu Asp
Thr 835 840 845 Ala
Gln Ala Ala Ala Ala Gly His Arg Leu Leu Ala Glu Gln Glu Val 850
855 860 Leu Ala Pro Gln Val Val
Leu Ala Pro Gly Gly Gly Ala Ala Tyr Asn 865 870
875 880 Leu Gly Ala Pro Pro Arg Thr Gln Phe Ser Gly
Leu Arg Arg Asp Leu 885 890
895 Pro Pro Ser Val His Leu Leu Thr Leu Ala Ser Trp Gly Pro Glu Met
900 905 910 Val Leu
Leu Arg Leu Glu His Gln Phe Ala Val Gly Glu Asp Ser Gly 915
920 925 Arg Asn Leu Ser Ala Pro Val
Thr Leu Asn Leu Arg Asp Leu Phe Ser 930 935
940 Thr Phe Thr Ile Thr Arg Leu Gln Glu Thr Thr Leu
Val Ala Asn Gln 945 950 955
960 Leu Arg Glu Ala Ala Ser Arg Leu Lys Trp Thr Thr Asn Thr Gly Pro
965 970 975 Thr Pro His
Gln Thr Pro Tyr Gln Leu Asp Pro Ala Asn Ile Thr Leu 980
985 990 Glu Pro Met Glu Ile Arg Thr Phe
Leu Ala Ser Val Gln Trp Lys Glu 995 1000
1005 Val Asp Gly 1010 228079DNAArtificial
SequenceDescription of Artificial Sequence Synthetic expression
plasmid pLamanExp1 22agatcttcaa tattggccat tagccatatt attcattggt
tatatagcat aaatcaatat 60tggctattgg ccattgcata cgttgtatct atatcataat
atgtacattt atattggctc 120atgtccaata tgaccgccat gttggcattg attattgact
agttattaat agtaatcaat 180tacggggtca ttagttcata gcccatatat ggagttccgc
gttacataac ttacggtaaa 240tggcccgcct ggctgaccgc ccaacgaccc ccgcccattg
acgtcaataa tgacgtatgt 300tcccatagta acgccaatag ggactttcca ttgacgtcaa
tgggtggagt atttacggta 360aactgcccac ttggcagtac atcaagtgta tcatatgcca
agtccgcccc ctattgacgt 420caatgacggt aaatggcccg cctggcatta tgcccagtac
atgaccttac gggactttcc 480tacttggcag tacatctacg tattagtcat cgctattacc
atggtgatgc ggttttggca 540gtacaccaat gggcgtggat agcggtttga ctcacgggga
tttccaagtc tccaccccat 600tgacgtcaat gggagtttgt tttggcacca aaatcaacgg
gactttccaa aatgtcgtaa 660caactgcgat cgcccgcccc gttgacgcaa atgggcggta
ggcgtgtacg gtgggaggtc 720tatataagca gagctcgttt agtgaaccgt cagatcacta
gaagctttat tgcggtagtt 780tatcacagtt aaattgctaa cgcagtcagt gcttctgaca
caacagtctc gaacttaagc 840tgcagtgact ctcttaaggt agccttgcag aagttggtcg
tgaggcactg ggcaggtaag 900tatcaaggtt acaagacagg tttaaggaga ccaatagaaa
ctgggcttgt cgagacagag 960aagactcttg cgtttctgat aggcacctat tggtcttact
gacatccact ttgcctttct 1020ctccacaggt gtccactccc agttcaatta cagctcttaa
ggctagagta cttaatacga 1080ctcactatag gctagcctcg agaattcgcc gccatgggcg
cctacgcgcg ggcttcgggg 1140gtctgcgctc gaggctgcct ggactcagca ggcccctgga
ccatgtcccg cgccctgcgg 1200ccaccgctcc cgcctctctg ctttttcctt ttgttgctgg
cggctgccgg tgctcgggcc 1260gggggatacg agacatgccc cacagtgcag ccgaacatgc
tgaacgtgca cctgctgcct 1320cacacacatg atgacgtggg ctggctcaaa accgtggacc
agtactttta tggaatcaag 1380aatgacatcc agcacgccgg tgtgcagtac atcctggact
cggtcatctc tgccttgctg 1440gcagatccca cccgtcgctt catttacgtg gagattgcct
tcttctcccg ttggtggcac 1500cagcagacaa atgccacaca ggaagtcgtg cgagaccttg
tgcgccaggg gcgcctggag 1560ttcgccaatg gtggctgggt gatgaacgat gaggcagcca
cccactacgg tgccatcgtg 1620gaccagatga cacttgggct gcgctttctg gaggacacat
ttggcaatga tgggcgaccc 1680cgtgtggcct ggcacattga ccccttcggc cactctcggg
agcaggcctc gctgtttgcg 1740cagatgggct tcgacggctt cttctttggg cgccttgatt
atcaagataa gtgggtacgg 1800atgcagaagc tggagatgga gcaggtgtgg cgggccagca
ccagcctgaa gcccccgacc 1860gcggacctct tcactggtgt gcttcccaat ggttacaacc
cgccaaggaa tctgtgctgg 1920gatgtgctgt gtgtcgatca gccgctggtg gaggaccctc
gcagccccga gtacaacgcc 1980aaggagctgg tcgattactt cctaaatgtg gccactgccc
agggccggta ttaccgcacc 2040aaccacactg tgatgaccat gggctcggac ttccaatatg
agaatgccaa catgtggttc 2100aagaaccttg acaagctcat ccggctggta aatgcgcagc
aggcaaaagg aagcagtgtc 2160catgttctct actccacccc cgcttgttac ctctgggagc
tgaacaaggc caacctcacc 2220tggtcagtga aacatgacga cttcttccct tacgcggatg
gcccccacca gttctggacc 2280ggttactttt ccagtcggcc ggccctcaaa cgctacgagc
gcctcagcta caacttcctg 2340caggtgtgca accagctgga ggcgctggtg ggcctggcgg
ccaacgtggg accctatggc 2400tccggagaca gtgcacccct caatgaggcg atggctgtgc
tccagcatca cgacgccgtc 2460agcggcacct cccgccagca cgtggccaac gactacgcgc
gccagcttgc ggcaggctgg 2520gggccttgcg aggttcttct gagcaacgcg ctggcgcggc
tcagaggctt caaagatcac 2580ttcacctttt gccaacagct aaacatcagc atctgcccgc
tcagccagac ggcggcgcgc 2640ttccaggtca tcgtttataa tcccctgggg cggaaggtga
attggatggt acggctgccg 2700gtcagcgaag gcgttttcgt tgtgaaggac cccaatggca
ggacagtgcc cagcgatgtg 2760gtaatatttc ccagctcaga cagccaggcg caccctccgg
agctgctgtt ctcagcctca 2820ctgcccgccc tgggcttcag cacctattca gtagcccagg
tgcctcgctg gaagccccag 2880gcccgcgcac cacagcccat ccccagaaga tcctggtccc
ctgctttaac catcgaaaat 2940gagcacatcc gggcaacgtt tgatcctgac acagggctgt
tgatggagat tatgaacatg 3000aatcagcaac tcctgctgcc tgttcgccag accttcttct
ggtacaacgc cagtataggt 3060gacaacgaaa gtgaccaggc ctcaggtgcc tacatcttca
gacccaacca acagaaaccg 3120ctgcctgtga gccgctgggc tcagatccac ctggtgaaga
cacccttggt gcaggaggtg 3180caccagaact tctcagcttg gtgttcccag gtggttcgcc
tgtacccagg acagcggcac 3240ctggagctag agtggtcggt ggggccgata cctgtgggcg
acacctgggg gaaggaggtc 3300atcagccgtt ttgacacacc gctggagaca aagggacgct
tctacacaga cagcaatggc 3360cgggagatcc tggagaggag gcgggattat cgacccacct
ggaaactgaa ccagacggag 3420cccgtggcag gaaactacta tccagtcaac acccggattt
acatcacgga tggaaacatg 3480cagctgactg tgctgactga ccgctcccag gggggcagca
gcctgagaga tggctcgctg 3540gagctcatgg tgcaccgaag gctgctgaag gacgatggac
gcggagtatc ggagccacta 3600atggagaacg ggtcgggggc gtgggtgcga gggcgccacc
tggtgctgct ggacacagcc 3660caggctgcag ccgccggaca ccggctcctg gcggagcagg
aggtcctggc ccctcaggtg 3720gtgctggccc cgggtggcgg cgccgcctac aatctcgggg
ctcctccgcg cacgcagttc 3780tcagggctgc gcagggacct gccgccctcg gtgcacctgc
tcacgctggc cagctggggc 3840cccgaaatgg tgctgctgcg cttggagcac cagtttgccg
taggagagga ttccggacgt 3900aacctgagcg cccccgttac cttgaacttg agggacctgt
tctccacctt caccatcacc 3960cgcctgcagg agaccacgct ggtggccaac cagctccgcg
aggcagcctc caggctcaag 4020tggacaacaa acacaggccc cacaccccac caaactccgt
accagctgga cccggccaac 4080atcacgctgg aacccatgga aatccgcact ttcctggcct
cagttcaatg gaaggaggtg 4140gatggttagg tctgctggga tgggccctct agagtcgacc
cgggcggccg cttcccttta 4200gtgagggtta atgcttcgag cagacatgat aagatacatt
gatgagtttg gacaaaccac 4260aactagaatg cagtgaaaaa aatgctttat ttgtgaaatt
tgtgatgcta ttgctttatt 4320tgtaaccatt ataagctgca ataaacaagt taacaacaac
aattgcattc attttatgtt 4380tcaggttcag ggggagatgt gggaggtttt ttaaagcaag
taaaacctct acaaatgtgg 4440taaaatccga taaggatcga tccgggctgg cgtaatagcg
aagaggcccg caccgatcgc 4500ccttcccaac agttgcgcag cctgaatggc gaatggacgc
gccctgtagc ggcgcattaa 4560gcgcggcggg tgtggtggtt acgcgcagcg tgaccgctac
acttgccagc gccctagcgc 4620ccgctccttt cgctttcttc ccttcctttc tcgccacgtt
cgccggcttt ccccgtcaag 4680ctctaaatcg ggggctccct ttagggttcc gatttagagc
tttacggcac ctcgaccgca 4740aaaaacttga tttgggtgat ggttcacgta gtgggccatc
gccctgatag acggtttttc 4800gccctttgac gttggagtcc acgttcttta atagtggact
cttgttccaa actggaacaa 4860cactcaaccc tatctcggtc tattcttttg atttataagg
gattttgggg atttcggcct 4920attggttaaa aaatgagctg atttaacaaa aatttaacgc
gaattaattc tgtggaatgt 4980gtgtcagtta gggtgtggaa agtccccagg ctccccaggc
aggcagaagt atgcaaagca 5040tgcatctcaa ttagtcagca accaggtgtg gaaagtcccc
aggctcccca gcaggcagaa 5100gtatgcaaag catgcatctc aattagtcag caaccatagt
cccgccccta actccgccca 5160tcccgcccct aactccgccc agttccgccc attctccgcc
ccatggctga ctaatttttt 5220ttatttatgc agaggccgag gccgcctctg cctctgagct
attccagaag tagtgaggag 5280gcttttttgg aggcctaggc ttttgcaaaa agctcccggg
atggttcgac cattgaactg 5340catcgtcgcc gtgtcccaaa atatggggat tggcaagaac
ggagacctac cctggcctcc 5400gctcaggaac gagttcaagt acttccaaag aatgaccaca
acctcttcag tggaaggtaa 5460acagaatctg gtgattatgg gtaggaaaac ctggttctcc
attcctgaga agaatcgacc 5520tttaaaggac agaattaata tagttctcag tagagaactc
aaagaaccac cacgaggagc 5580tcattttctt gccaaaagtt tggatgatgc cttaagactt
attgaacaac cggaattggc 5640aagtaaagta gacatggttt ggatagtcgg aggcagttct
gtttaccagg aagccatgaa 5700tcaaccaggc caccttagac tctttgtgac aaggatcatg
caggaatttg aaagtgacac 5760gtttttccca gaaattgatt tggggaaata taaacttctc
ccagaatacc caggcgtcct 5820ctctgaggtc caggaggaaa aaggcatcaa gtataagttt
gaagtctacg agaagaaaga 5880ctaattcgaa atgaccgacc aagcgacgcc caacctgcca
tcacgatggc cgcaataaaa 5940tatctttatt ttcattacat ctgtgtgttg gttttttgtg
tgaatcgata gcgataagga 6000tccgcgtatg gtgcactctc agtacaatct gctctgatgc
cgcatagtta agccagcccc 6060gacacccgcc aacacccgct gacgcgccct gacgggcttg
tctgctcccg gcatccgctt 6120acagacaagc tgtgaccgtc tccgggagct gcatgtgtca
gaggttttca ccgtcatcac 6180cgaaacgcgc gagacgaaag ggcctcgtga tacgcctatt
tttataggtt aatgtcatga 6240taataatggt ttcttagacg tcaggtggca cttttcgggg
aaatgtgcgc ggaaccccta 6300tttgtttatt tttctaaata cattcaaata tgtatccgct
catgagacaa taaccctgat 6360aaatgcttca ataatattga aaaaggaaga gtatgagtat
tcaacatttc cgtgtcgccc 6420ttattccctt ttttgcggca ttttgccttc ctgtttttgc
tcacccagaa acgctggtga 6480aagtaaaaga tgctgaagat cagttgggtg cacgagtggg
ttacatcgaa ctggatctca 6540acagcggtaa gatccttgag agttttcgcc ccgaagaacg
ttttccaatg atgagcactt 6600ttaaagttct gctatgtggc gcggtattat cccgtattga
cgccgggcaa gagcaactcg 6660gtcgccgcat acactattct cagaatgact tggttgagta
ctcaccagtc acagaaaagc 6720atcttacgga tggcatgaca gtaagagaat tatgcagtgc
tgccataacc atgagtgata 6780acactgcggc caacttactt ctgacaacga tcggaggacc
gaaggagcta accgcttttt 6840tgcacaacat gggggatcat gtaactcgcc ttgatcgttg
ggaaccggag ctgaatgaag 6900ccataccaaa cgacgagcgt gacaccacga tgcctgtagc
aatggcaaca acgttgcgca 6960aactattaac tggcgaacta cttactctag cttcccggca
acaattaata gactggatgg 7020aggcggataa agttgcagga ccacttctgc gctcggccct
tccggctggc tggtttattg 7080ctgataaatc tggagccggt gagcgtgggt ctcgcggtat
cattgcagca ctggggccag 7140atggtaagcc ctcccgtatc gtagttatct acacgacggg
gagtcaggca actatggatg 7200aacgaaatag acagatcgct gagataggtg cctcactgat
taagcattgg taactgtcag 7260accaagttta ctcatatata ctttagattg atttaaaact
tcatttttaa tttaaaagga 7320tctaggtgaa gatccttttt gataatctca tgaccaaaat
cccttaacgt gagttttcgt 7380tccactgagc gtcagacccc gtagaaaaga tcaaaggatc
ttcttgagat cctttttttc 7440tgcgcgtaat ctgctgcttg caaacaaaaa aaccaccgct
accagcggtg gtttgtttgc 7500cggatcaaga gctaccaact ctttttccga aggtaactgg
cttcagcaga gcgcagatac 7560caaatactgt ccttctagtg tagccgtagt taggccacca
cttcaagaac tctgtagcac 7620cgcctacata cctcgctctg ctaatcctgt taccagtggc
tgctgccagt ggcgataagt 7680cgtgtcttac cgggttggac tcaagacgat agttaccgga
taaggcgcag cggtcgggct 7740gaacgggggg ttcgtgcaca cagcccagct tggagcgaac
gacctacacc gaactgagat 7800acctacagcg tgagctatga gaaagcgcca cgcttcccga
agggagaaag gcggacaggt 7860atccggtaag cggcagggtc ggaacaggag agcgcacgag
ggagcttcca gggggaaacg 7920cctggtatct ttatagtcct gtcgggtttc gccacctctg
acttgagcgt cgatttttgt 7980gatgctcgtc aggggggcgg agcctatgga aaaacgccag
caacgcggcc tttttacggt 8040tcctggcctt ttgctggcct tttgctcaca tggctcgac
8079233761DNAHomo sapiens 23ggctactctc ggcttcctgg
caacgccgag cgaaagctat gactgcggcc gcgggttcgg 60cgggccgcgc cgcggtgccc
ttgctgctgt gtgcgctgct ggcgcccggc ggcgcgtacg 120tgctcgacga ctccgacggg
ctgggccggg agttcgacgg catcggcgcg gtcagcggcg 180gcggggcaac ctcccgactt
ctagtaaatt acccagagcc ctatcgttct cagatattgg 240attatctctt taagccgaat
tttggtgcct ctttgcatat tttaaaagtg gaaataggtg 300gtgatgggca gacaacagac
ggcactgagc cctcccacat gcattatgca ctagatgaga 360attatttccg aggatacgag
tggtggttga tgaaagaagc taagaagagg aatcccaata 420ttacactcat tgggttgcca
tggtcattcc ctggatggct gggaaaaggt ttcgactggc 480cttatgtcaa tcttcagctg
actgcctatt atgtcgtgac ctggattgtg ggcgccaagc 540gttaccatga tttggacatt
gattatattg gaatttggaa tgagaggtca tataatgcca 600attatattaa gatattaaga
aaaatgctga attatcaagg tctccagcga gtgaaaatca 660tagcaagtga taatctctgg
gagtccatct ctgcatccat gctccttgat gccgaactct 720tcaaggtggt tgatgttata
ggggctcatt atcctggaac ccattcagca aaagatgcaa 780agttgactgg gaagaagctt
tggtcttctg aagactttag cactttaaat agtgacatgg 840gtgcaggctg ctggggtcgc
attttaaatc agaattatat caatggctat atgacttcca 900caatcgcatg gaatttagtg
gctagttact atgaacagtt gccttatggg agatgcgggt 960tgatgacggc ccaagagcca
tggagtgggc actacgtggt agaatctcct gtctgggtat 1020cagctcatac cactcagttt
actcaacctg gctggtatta cctgaagaca gttggccatt 1080tagagaaagg aggaagctac
gtagctctga ctgatggctt agggaacctc accatcatca 1140ttgaaaccat gagtcataaa
cattctaagt gcatacggcc atttcttcct tatttcaatg 1200tgtcacaaca atttgccacc
tttgttctta agggatcttt tagtgaaata ccagagctac 1260aggtatggta taccaaactt
ggaaaaacat ccgaaagatt tctttttaag cagctggatt 1320ctctatggct ccttgacagc
gatggcagtt tcacactgag cctgcatgaa gatgagctgt 1380tcacactcac cactctcacc
actggtcgca aaggcagcta cccgcttcct ccaaaatccc 1440agcccttccc aagtacctat
aaggatgatt tcaatgttga ttacccattt tttagtgaag 1500ctccaaactt tgctgatcaa
actggtgtat ttgaatattt tacaaatatt gaagaccctg 1560gcgagcatca cttcacgcta
cgccaagttc tcaaccagag acccattacg tgggctgccg 1620atgcatccaa cacaatcagt
attataggag actacaactg gaccaatctg actataaagt 1680gtgatgttta catagagacc
cctgacacag gaggtgtgtt cattgcagga agagtaaata 1740aaggtggtat tttgattaga
agtgccagag gaattttctt ctggattttt gcaaatggat 1800cttacagggt tacaggtgat
ttagctggat ggattatata tgctttagga cgtgttgaag 1860ttacagcaaa aaaatggtat
acactcacgt taactattaa gggtcatttc gcctctggca 1920tgctgaatga caagtctctg
tggacagaca tccctgtgaa ttttccaaag aatggctggg 1980ctgcaattgg aactcactcc
tttgaatttg cacagtttga caactttctt gtggaagcca 2040cacgctaata cttaacaggg
catcatagaa tactctggat tttcttccct tctttttggt 2100tttggttcag agccaattct
tgtttcattg gaacagtata tgaggctttt gagactaaaa 2160ataatgaaga gtaaaagggg
agagaaattt atttttaatt taccctgtgg aagattttat 2220tagaattaat tccaagggga
aaactggtga atctttaaca ttacctggtg tgttccctaa 2280cattcaaact gtgcattggc
cataccctta ggagtggttt gagtagtaca gacctcgaag 2340ccttgctgct aacactgagg
tagctctctt catcttattt gcaagcggtc ctgtagatgg 2400cagtaacttg atcatcactg
agatgtattt atgcatgctg accgtgtgtc caagtgagcc 2460agtgtcttca tcacaagatg
atgctgccat aatagaaagc tgaagaacac tagaagtagc 2520tttttgaaaa ccacttcaac
ctgttatgct ttatgctcta aaaagtattt ttttattttc 2580ctttttaaga tgatactttt
gaaatgcagg atatgatgag tgggatgatt ttaaaaacgc 2640ctctttaata aactacctct
aacactattt ctgcggtaat agatattagc agattaattg 2700ggttatttgc attatttaat
ttttttgatt ccaagttttg gtcttgtaac cactataact 2760ctctgtgaac gtttttccag
gtggctggaa gaaggaagaa aacctgatat agccaatgct 2820gttgtagtcg tttcctcagc
ctcatctcac tgtgctgtgg tctgtcctca catgtgcact 2880ggtaacagac tcacacagct
gatgaatgct tttctctcct tatgtgtgga aggaggggag 2940cacttagaca tttgctaact
cccagaattg gatcatctcc taagatgtac ttacttttta 3000aagtccaaat atgtttatat
ttaaatatac gtgagcatgt tcatcatgtt gtatgattta 3060tactaagcat taatgtggct
ctatgtagca aatcagttat tcatgtaggt aaagtaaatc 3120tagaattatt tataagaatt
actcattgaa ctaattctac tatttaggaa tttataagag 3180tctaacatag gcttagctac
agtgaagttt tgcattgctt ttgaagacaa gaaaagtgct 3240agaataaata agattacaga
gaaaattttt tgttaaaacc aagtgatttc cagctgatgt 3300atctaatatt ttttaaaaca
aacattatag aggtgtaatt tatttacaat aaaatgttcc 3360tactttaaat atacaattca
gtgagttttg ataaattgat atacccatgt aaccaacact 3420ccagtcaagc ttcagaatat
ttccatcacc ccagaaggtt ctcttgtata cctgctcagt 3480cagttccttt cactcccaat
tgttggcagc cattgatagg aattctatca ctataggtta 3540gttttctttg ttccagaaca
tcatgaaagc ggcgtcatgt actgtgtatt cttatgaatg 3600gtttctttcc atcagcataa
tgatttgaga ttggtccatg ttgtgtgatt cagtggtttg 3660ttccttctta tttctgaaga
gttttccatt gtatgaatat accacaattt gtttcctccc 3720caccagtttc tgatactaca
attaaaactg tctacattta c 376124669PRTHomo sapiens
24Met Thr Ala Ala Ala Gly Ser Ala Gly Arg Ala Ala Val Pro Leu Leu 1
5 10 15 Leu Cys Ala Leu
Leu Ala Pro Gly Gly Ala Tyr Val Leu Asp Asp Ser 20
25 30 Asp Gly Leu Gly Arg Glu Phe Asp Gly
Ile Gly Ala Val Ser Gly Gly 35 40
45 Gly Ala Thr Ser Arg Leu Leu Val Asn Tyr Pro Glu Pro Tyr
Arg Ser 50 55 60
Gln Ile Leu Asp Tyr Leu Phe Lys Pro Asn Phe Gly Ala Ser Leu His 65
70 75 80 Ile Leu Lys Val Glu
Ile Gly Gly Asp Gly Gln Thr Thr Asp Gly Thr 85
90 95 Glu Pro Ser His Met His Tyr Ala Leu Asp
Glu Asn Tyr Phe Arg Gly 100 105
110 Tyr Glu Trp Trp Leu Met Lys Glu Ala Lys Lys Arg Asn Pro Asn
Ile 115 120 125 Thr
Leu Ile Gly Leu Pro Trp Ser Phe Pro Gly Trp Leu Gly Lys Gly 130
135 140 Phe Asp Trp Pro Tyr Val
Asn Leu Gln Leu Thr Ala Tyr Tyr Val Val 145 150
155 160 Thr Trp Ile Val Gly Ala Lys Arg Tyr His Asp
Leu Asp Ile Asp Tyr 165 170
175 Ile Gly Ile Trp Asn Glu Arg Ser Tyr Asn Ala Asn Tyr Ile Lys Ile
180 185 190 Leu Arg
Lys Met Leu Asn Tyr Gln Gly Leu Gln Arg Val Lys Ile Ile 195
200 205 Ala Ser Asp Asn Leu Trp Glu
Ser Ile Ser Ala Ser Met Leu Leu Asp 210 215
220 Ala Glu Leu Phe Lys Val Val Asp Val Ile Gly Ala
His Tyr Pro Gly 225 230 235
240 Thr His Ser Ala Lys Asp Ala Lys Leu Thr Gly Lys Lys Leu Trp Ser
245 250 255 Ser Glu Asp
Phe Ser Thr Leu Asn Ser Asp Met Gly Ala Gly Cys Trp 260
265 270 Gly Arg Ile Leu Asn Gln Asn Tyr
Ile Asn Gly Tyr Met Thr Ser Thr 275 280
285 Ile Ala Trp Asn Leu Val Ala Ser Tyr Tyr Glu Gln Leu
Pro Tyr Gly 290 295 300
Arg Cys Gly Leu Met Thr Ala Gln Glu Pro Trp Ser Gly His Tyr Val 305
310 315 320 Val Glu Ser Pro
Val Trp Val Ser Ala His Thr Thr Gln Phe Thr Gln 325
330 335 Pro Gly Trp Tyr Tyr Leu Lys Thr Val
Gly His Leu Glu Lys Gly Gly 340 345
350 Ser Tyr Val Ala Leu Thr Asp Gly Leu Gly Asn Leu Thr Ile
Ile Ile 355 360 365
Glu Thr Met Ser His Lys His Ser Lys Cys Ile Arg Pro Phe Leu Pro 370
375 380 Tyr Phe Asn Val Ser
Gln Gln Phe Ala Thr Phe Val Leu Lys Gly Ser 385 390
395 400 Phe Ser Glu Ile Pro Glu Leu Gln Val Trp
Tyr Thr Lys Leu Gly Lys 405 410
415 Thr Ser Glu Arg Phe Leu Phe Lys Gln Leu Asp Ser Leu Trp Leu
Leu 420 425 430 Asp
Ser Asp Gly Ser Phe Thr Leu Ser Leu His Glu Asp Glu Leu Phe 435
440 445 Thr Leu Thr Thr Leu Thr
Thr Gly Arg Lys Gly Ser Tyr Pro Leu Pro 450 455
460 Pro Lys Ser Gln Pro Phe Pro Ser Thr Tyr Lys
Asp Asp Phe Asn Val 465 470 475
480 Asp Tyr Pro Phe Phe Ser Glu Ala Pro Asn Phe Ala Asp Gln Thr Gly
485 490 495 Val Phe
Glu Tyr Phe Thr Asn Ile Glu Asp Pro Gly Glu His His Phe 500
505 510 Thr Leu Arg Gln Val Leu Asn
Gln Arg Pro Ile Thr Trp Ala Ala Asp 515 520
525 Ala Ser Asn Thr Ile Ser Ile Ile Gly Asp Tyr Asn
Trp Thr Asn Leu 530 535 540
Thr Ile Lys Cys Asp Val Tyr Ile Glu Thr Pro Asp Thr Gly Gly Val 545
550 555 560 Phe Ile Ala
Gly Arg Val Asn Lys Gly Gly Ile Leu Ile Arg Ser Ala 565
570 575 Arg Gly Ile Phe Phe Trp Ile Phe
Ala Asn Gly Ser Tyr Arg Val Thr 580 585
590 Gly Asp Leu Ala Gly Trp Ile Ile Tyr Ala Leu Gly Arg
Val Glu Val 595 600 605
Thr Ala Lys Lys Trp Tyr Thr Leu Thr Leu Thr Ile Lys Gly His Phe 610
615 620 Ala Ser Gly Met
Leu Asn Asp Lys Ser Leu Trp Thr Asp Ile Pro Val 625 630
635 640 Asn Phe Pro Lys Asn Gly Trp Ala Ala
Ile Gly Thr His Ser Phe Glu 645 650
655 Phe Ala Gln Phe Asp Asn Phe Leu Val Glu Ala Thr Arg
660 665 2511PRTArtificial
SequenceDescription of Artificial Sequence Synthetic 11 residue
basic peptide from HIV TAT protein 25Tyr Gly Arg Lys Lys Arg Arg Gln Arg
Arg Arg 1 5 10 2611PRTArtificial
SequenceDescription of Artificial Sequence Synthetic TAT peptide
26Tyr Ala Arg Ala Ala Ala Arg Gln Ala Arg Ala 1 5
10
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