Patent application title: BIOLOGICAL PRODUCTS
Inventors:
IPC8 Class: AC07K1628FI
USPC Class:
1 1
Class name:
Publication date: 2016-11-10
Patent application number: 20160326247
Abstract:
There is disclosed antibody molecules containing at least one CDR derived
from a mouse monoclonal antibody having specificity for human CD22. There
is also disclosed a CDR grafted antibody wherein at least one of the CDRs
is a modified CDR. Further disclosed are DNA sequences encoding the
chains of the antibody molecules, vectors, transformed host cells and
uses of the antibody molecules in the treatment of diseases mediated by
cells expressing CD22.Claims:
1. A DNA sequence encoding a murine anti-CD22 monoclonal antibody,
wherein the variable domain of the light chain has the sequence given in
SEQ ID NO:7 and the variable domain of the heavy chain has the sequence
given in SEQ ID NO:8.
2. The DNA sequence of claim 1, wherein the light chain variable domain is encoded by SEQ ID NO:48.
3. The DNA sequence of claim 1, wherein the heavy chain variable domain is encoded by SEQ ID NO:49.
4. The DNA sequence of claim 2, wherein the heavy chain variable domain is encoded by SEQ ID NO:49.
5. A cloning or expression vector comprising a DNA according to claims 1-4
6. A host cell comprising a cloning or expression vector according to claim 5.
7. A DNA sequence encoding a chimeric antibody molecule, wherein the variable domain of the light chain has the sequence given in SEQ ID NO: 7 and the variable domain of the heavy chain has the sequence given in SEQ ID NO:8.
8. The DNA sequence of claim 7, wherein the light chain variable domain is encoded by SEQ ID NO:48.
9. The DNA sequence of claim 7, wherein the heavy chain variable domain is encoded by SEQ ID NO:49.
10. The DNA sequence of claim 8, wherein the heavy chain variable domain is encoded by SEQ ID NO:49.
11. A cloning or expression vector comprising a DNA according to claims 7-10.
12. A host cell comprising a cloning or expression vector according to claim 11.
13. A DNA sequence encoding an antibody or fragment thereof comprising a light chain variable domain and a heavy chain variable domain, wherein the antibody or fragment thereof is expressed in a mammalian cell and wherein the light chain variable domain has a sequence set forth in SEQ ID NO:7 and the heavy chain variable domain has a sequence set forth in SEQ ID NO:8.
14. The DNA sequence of claim 13, wherein the light chain variable domain is encoded by SEQ ID NO:48.
15. The DNA sequence of claim 13, wherein the heavy chain variable domain is encoded by SEQ ID NO:49.
16. The DNA sequence of claim 14, wherein the heavy chain variable domain is encoded by SEQ ID NO:49.
17. A cloning or expression vector comprising a DNA according to claims 13-16.
18. A host cell comprising a cloning or expression vector according to claim 17.
Description:
[0001] This application is a Continuation of application Ser. No.
11/519,585, filed on Sep. 11, 2006, which is a Continuation of
application Ser. No. 10/428,408, filed May 2, 2003, now U.S. Pat. No.
7,355,011 B2 which claims priority under 35 U.S.C. .sctn.119(a)-(d) to
United Kingdom Application No. GB 0210121.0, filed May 2, 2002, all
applications being incorporated by reference herein in their entireties.
[0002] The present invention relates to an antibody molecule having specificity for antigenic determinants of the B lymphocyte antigen, CD22. The present invention also relates to the therapeutic uses of the antibody molecule and methods for producing the antibody molecule.
[0003] In a natural antibody molecule, there are two heavy chains and two light chains. Each heavy chain and each light chain has at its N-terminal end a variable domain. Each variable domain is composed of four framework regions (FRs) alternating with three complementarity determining regions (CDRs). The residues in the variable domains are conventionally numbered according to a system devised by Kabat et al. This system is set forth in Kabat et al., 1987, in Sequences of Proteins of Immunological Interest, US Department of Health and Human Services, NIH, USA (hereafter "Kabat et al. (supra)"). This numbering system is used in the present specification except where otherwise indicated.
[0004] The Kabat residue designations do not always correspond directly with the linear numbering of the amino acid residues. The actual linear amino acid sequence may contain fewer or additional amino acids than in the strict Kabat numbering corresponding to a shortening of, or insertion into, a structural component, whether framework or CDR, of the basic variable domain structure. The correct Kabat numbering of residues may be determined for a given antibody by alignment of residues of homology in the sequence of the antibody with a "standard" Kabat numbered sequence.
[0005] The CDRs of the heavy chain variable domain are located at residues 31-35 (CDR-H1), residues 50-65 (CDR-H2) and residues 95-102 (CDR-H3) according to the Kabat numbering.
[0006] The CDRs of the light chain variable domain are located at residues 24-34 (CDR-L1), residues 50-56 (CDR-L2) and residues 89-97 (CDR-L3) according to the Kabat numbering.
[0007] Construction of CDR-grafted antibodies is described in European Patent Application EP-A-0239400, which discloses a process in which the CDRs of a mouse monoclonal antibody are grafted onto the framework regions of the variable domains of a human immunoglobulin by site directed mutagenesis using long oligonucleotides. The CDRs determine the antigen binding specificity of antibodies and are relatively short peptide sequences carried on the framework regions of the variable domains.
[0008] The earliest work on humanising monoclonal antibodies by CDR-grafting was carried out on monoclonal antibodies recognising synthetic antigens, such as NP. However, examples in which a mouse monoclonal antibody recognising lysozyme and a rat monoclonal antibody recognising an antigen on human T-cells were humanised by CDR-grafting have been described by Verhoeyen et al. (Science, 239, 1534-1536, 1988) and Riechmann et al. (Nature, 332, 323-324, 1988), respectively.
[0009] Riechmann et al., found that the transfer of the CDRs alone (as defined by Kabat (Kabat et al. (supra) and Wu et al., J. Exp. Med., 132, 211-250, 1970)) was not sufficient to provide satisfactory antigen binding activity in the CDR-grafted product. It was found that a number of framework residues have to be altered so that they correspond to those of the donor framework region. Proposed criteria for selecting which framework residues need to be altered are described in International Patent Application No. WO 90/07861.
[0010] A number of reviews discussing CDR-grafted antibodies have been published, including Vaughan et al. (Nature Biotechnology, 16, 535-539, 1998).
[0011] Malignant lymphomas are a diverse group of neoplasms. The majority of cases occur in older people. Non-Hodgkins Lymphoma (NHL) is a disease that currently affects 200,000 to 250,000 patients in the U.S. It is the second fastest rising cancer in the U.S., rising at a rate of about 55,000 new cases per year. The incidence is rising at a rate that is greater than can be accounted for simply by the increasing age of the population and exposure to known risk factors.
[0012] The classification of lymphoma is complex, and has evolved in recent decades. In 1994 the Revised European-American Lymphoma (REAL) classification was introduced. This classification organises lymphomas of B cell (the most frequently identified), T cell and unclassifiable origin into agreed subtypes. In everyday practice, the grouping of NHLs into low, intermediate and high-grade categories on the basis of their general histological appearance, broadly reflects their clinical behaviour.
[0013] NHL predominantly affects the lymph nodes but, in individual patients, the tumour may involve other anatomical sites such as the liver, spleen, bone marrow, lung, gut and skin. The disease commonly presents as a painless enlargement of lymph nodes. Extranodal lymphoma most frequently affects the gut, although primary lymphoma of virtually every organ has been documented. Systemic symptoms include fever, sweats, tiredness and weight loss.
[0014] Until recently, the Ann Arbor staging system, based entirely upon the anatomical extent of disease, was the major determinant of therapy in NHL. This information may be refined by incorporating additional prognostic pointers, including age, serum lactate dehydrogenase levels and performance status. Even so, knowledge of the Ann Arbor staging system, together with the histological and immunological subtype of the tumour, is still the major determinant of treatment.
[0015] Low grade NHL has an indolent course, with a median patient survival of 8 to 10 years. Survival is little impacted by currently available therapy, although irradiation of local disease and chemotherapy for systemic symptoms improves patients' quality of life. Combination chemotherapy may be reserved for relapsed disease. Intermediate disease and, especially, high grade disease is extremely aggressive and tends to disseminate. Disease of this grade requires urgent treatment. Radiotherapy may be a useful component of treatment in patients with very bulky disease. Many different chemotherapy regimens have been employed, and long-term disease-free survival may be obtained in more than half of patients. High dose therapy with stem cell support was introduced initially for patients with relapsed or refractory disease, but is now increasingly finding a place in first line therapy for patients with poor-risk disease. The tendency in recent years for an increasingly aggressive therapeutic approach must be balanced against the generally elderly age and relative debility of many patients with NHL, and by the need to match the toxicity of treatment to the individual prognosis of each patient's disease.
[0016] Improved treatments, that are more effective and better tolerated, are needed. Agents recently introduced include new cytotoxic drugs, progressively incorporated into combinations, and the introduction of antibody-based therapies.
[0017] Non-Hodgkin's lymphoma encompasses a range of B cell lymphomas. B cell antigens therefore represent suitable targets for antibody therapy.
[0018] CD22 is a 135 kDa membrane glycoprotein belonging to a family of sialic acid binding proteins called sialoadhesins. It is detected in the cytoplasm early in B cell development, appears on the cell surface simultaneously with IgD and is found on most mature B cells. Expression is increased following B cell activation. CD22 is lost with terminal differentiation and is generally reported as being absent on plasma cells. Thus this internalising antigen is present on the surface of pre-B cells and mature B cells but not stem cells or plasma cells.
[0019] Two isoforms of CD22 exist in man. The predominant form (CD22.beta.) contains 7 immunoglobulin-like (Ig-like) domains in the extracellular region. The CD22.alpha. variant lacks Ig-like domain 4 and may have a truncated cytoplasmic domain. Antibodies which block CD22 adhesion to monocytes, neutrophils, lymphocytes and erythrocytes have been shown to bind within the first or second Ig-like domain.
[0020] The cytoplasmic domain of CD22 is tyrosine phosphorylated upon ligation of the B cell antigen receptor and associates with Lyk, Syk and phosphatidyl inositol 3-kinase. The function of CD22 is to down-modulate the B cell activation threshold. It can also mediate cell adhesion through interaction with cells bearing the appropriate sialoglycoconjugates.
[0021] CD22 is expressed in most B cell leukaemias and lymphomas, including NHL, acute lymphoblastic leukaemia (B-ALL), chronic lymphocytic leukaemia (B-CLL) and especially acute non-lymphocytic leukaemia (ANLL).
[0022] Monoclonal antibodies against CD22 have been described in the prior art. WO 98/41641 describes recombinant anti-CD22 antibodies with cysteine residues at V.sub.H44 and V.sub.L100. WO 96/04925 describes the V.sub.H and V.sub.L regions of the anti-CD22 antibody LL2. U.S. Pat. No. 5,686,072 describes combinations of anti-CD22 and anti-CD19 immunotoxins. WO 98/42378 describes the use of naked anti-CD22 antibodies for the treatment of B-cell malignancies.
[0023] A number of antibody-based therapeutics have either been recently licensed, eg. Rituxan (an unlabelled chimeric human .gamma.1 (+m.gamma.1V-region) specific for CD20), or are in clinical trials for this disease. These rely either on complement- or ADCC-mediated killing of B cells or the use of radionuclides, such as .sup.131I or .sup.90Y, which have associated preparation and use problems for clinicians and patients. There is a need for an antibody molecule to treat NHL which can be used repeatedly and produced easily and efficiently. There is also a need for an antibody molecule, which has high affinity for CD22 and low immunogenicity in humans.
SUMMARY OF THE INVENTION
[0024] In a first aspect, the present invention provides an antibody molecule having specificity for human CD22, comprising a heavy chain wherein the variable domain comprises a CDR (as defined by Kabat et al., (supra)) having the sequence given as H1 in FIG. 1 (SEQ ID NO:1) for CDR-H1, as H2 in FIG. 1 (SEQ ID NO:2) or an H2 from which a potential glycosylation site has been removed, or an H2 in which the lysine residue at position 60 (according to the Kabat numbering system) has been replaced by an alternative amino acid, or an H2 in which both the glycosylation site and the reactive lysine at position 60 have been removed for CDR-H2 or as H3 in FIG. 1 (SEQ ID NO:3) for CDR-H3.
[0025] The antibody molecule of the first aspect of the present invention comprises at least one CDR selected from H1, H2 and H3 (SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:3) for the heavy chain variable domain. Preferably, the antibody molecule comprises at least two and more preferably all three CDRs in the heavy chain variable domain.
[0026] In a second aspect of the present invention, there is provided an antibody molecule having specificity for human CD22, comprising a light chain wherein the variable domain comprises a CDR (as defined by Kabat et al., (supra)) having the sequence given as L1 in FIG. 1 (SEQ ID NO:4) for CDR-L1, L2 in FIG. 1 (SEQ ID NO:5) for CDR-L2 or L3 in FIG. 1 (SEQ ID NO:6) for CDR-L3.
[0027] The antibody molecule of the second aspect of the present invention comprises at least one CDR selected from L1, L2 and L3 (SEQ ID NO:4; SEQ ID NO:5 and SEQ ID NO:6) for the light chain variable domain. Preferably, the antibody molecule comprises at least two and more preferably all three CDRs in the light chain variable domain.
[0028] The antibody molecules of the first and second aspects of the present invention preferably have a complementary light chain or a complementary heavy chain, respectively.
[0029] Preferably, the antibody molecule of the first or second aspect of the present invention comprises a heavy chain wherein the variable domain comprises a CDR (as defined by Kabat et al., (supra)) having the sequence given as H1 in FIG. 1 (SEQ ID NO:1) for CDR-H1, as H2 in FIG. 1 (SEQ ID NO:2) or an H2 from which a potential glycosylation site has been removed, or an H2 in which the lysine residue at position 60 (according to the Kabat numbering system) has been replaced by an alternative amino acid, or an H2 in which both the glycosylation site and the reactive lysine at position 60 have been removed for CDR-H2 or as H3 in FIG. 1 (SEQ ID NO:3) for CDR-H3 and a light chain wherein the variable domain comprises a CDR (as defined by Kabat et al., (supra)) having the sequence given as L1 in FIG. 1 (SEQ ID NO:4) for CDR-L1, as L2 in FIG. 1 (SEQ ID NO:5) for CDR-L2 or as L3 in FIG. 1 (SEQ ID NO:6) for CDR-L3.
[0030] The CDRs given in SEQ IDS NOs:1 to 6 and in FIG. 1 referred to above are derived from a mouse monoclonal antibody 5/44.
[0031] The complete sequences of the variable domains of the mouse 5/44 antibody are shown in FIG. 2 (light chain) (SEQ ID NO:7) and FIG. 3 (heavy chain) (SEQ ID NO:8). This mouse antibody is also referred to below as "the donor antibody" or the "murine monoclonal antibody".
[0032] A first alternatively preferred embodiment of the first or second aspect of the present invention is the mouse monoclonal antibody 5/44 having the light and heavy chain variable domain sequences shown in FIG. 2 (SEQ ID NO:7) and FIG. 3 (SEQ ID NO:8), respectively. The light chain constant region of 5/44 is kappa and the heavy chain constant region is IgG1.
[0033] In a second alternatively preferred embodiment, the antibody according to either of the first and second aspects of the present invention is a chimeric mouse/human antibody molecule, referred to herein as the chimeric 5/44 antibody molecule. The chimeric antibody molecule comprises the variable domains of the mouse monoclonal antibody 5/44 (SEQ ID NOs:7 and 8) and human constant domains. Preferably, the chimeric 5/44 antibody molecule comprises the human C kappa domain (Hieter et al., Cell, 22, 197-207, 1980; Genebank accession number J00241) in the light chain and the human gamma 4 domains (Flanagan et al., Nature, 300, 709-713, 1982) in the heavy chain, optionally with the serine residue at position 241 replaced by a proline residue.
[0034] Preferably, the antibody of the present invention comprises a heavy chain wherein the variable domain comprises as CDR-H2 (as defined by Kabat et al., (supra)) an H2' in which a potential glycosylation site sequence has been removed and which unexpectedly increased the affinity of the chimeric 5/44 antibody for the CD22 antigen and which preferably has as CDR-H2 the sequence given as H2' (SEQ ID NO:13).
[0035] Alternatively or additionally, the antibody of the present invention may comprise a heavy chain wherein the variable domain comprises as CDR-H2 (as defined by Kabat et al., (supra)) an H2'' in which a lysine residue at position 60, which is located at an exposed position within CDR-H2 and which is considered to have the potential to react with conjugation agents resulting in a reduction of antigen binding affinity, is substituted for an alternative amino acid to result in a conserved substitution. Preferably CDR-H2 has the sequence given as H2'' (SEQ ID NO:15).
[0036] Alternatively or additionally, the antibody of the present invention may comprise a heavy chain wherein the variable domain comprises as CDR-H2 (as defined by Kabat et al., (supra)) an H2''' in which both the potential glycosylation site sequence and the lysine residue at position 60, are substituted for alternative amino acids. Preferably CDR-H2 has the sequence given as H2''' (SEQ ID NO:16).
[0037] In a third alternatively preferred embodiment, the antibody according to either of the first and second aspects of the present invention is a CDR-grafted antibody molecule. The term "a CDR-grafted antibody molecule" as used herein refers to an antibody molecule wherein the heavy and/or light chain contains one or more CDRs (including, if desired, a modified CDR) from a donor antibody (e.g. a murine monoclonal antibody) grafted into a heavy and/or light chain variable region framework of an acceptor antibody (e.g. a human antibody).
[0038] Preferably, such a CDR-grafted antibody has a variable domain comprising human acceptor framework regions as well as one or more of the donor CDRs referred to above.
[0039] When the CDRs are grafted, any appropriate acceptor variable region framework sequence may be used having regard to the class/type of the donor antibody from which the CDRs are derived, including mouse, primate and human framework regions. Examples of human frameworks which can be used in the present invention are KOL, NEWM, REI, EU, TUR, TEI, LAY and POM (Kabat et al. (supra)). For example, KOL and NEWM can be used for the heavy chain, REI can be used for the light chain and EU, LAY and POM can be used for both the heavy chain and the light chain. Alternatively, human germline sequences may be used. The preferred framework region for the light chain is the human germline sub-group sequence (DPK9+JK1) shown in FIG. 5 (SEQ ID NO:17). The preferred framework region for the heavy chain is the human sub-group sequence (DP7+JH4) shown in FIG. 6 (SEQ ID NO:21).
[0040] In a CDR-grafted antibody of the present invention, it is preferred to use as the acceptor antibody one having chains which are homologous to the chains of the donor antibody. The acceptor heavy and light chains do not necessarily need to be derived from the same antibody and may, if desired, comprise composite chains having framework regions derived from different chains.
[0041] Also, in a CDR-grafted antibody of the present invention, the framework regions need not have exactly the same sequence as those of the acceptor antibody. For instance, unusual residues may be changed to more frequently-occurring residues for that acceptor chain class or type. Alternatively, selected residues in the acceptor framework regions may be changed so that they correspond to the residue found at the same position in the donor antibody or to a residue that is a conservative substitution for the residue found at the same position in the donor antibody. Such changes should be kept to the minimum necessary to recover the affinity of the donor antibody. A protocol for selecting residues in the acceptor framework regions which may need to be changed is set forth in WO 91/09967.
[0042] Preferably, in a CDR-grafted antibody molecule according to the present invention, if the acceptor light chain has the human sub-group DPK9+JK1 sequence (shown in FIG. 5) (SEQ ID NO:17 (DPK9) plus SEQ ID NO:18 (JK1)) then the acceptor framework regions of the light chain comprise donor residues at positions 2, 4, 37, 38, 45 and 60 and may additionally comprise a donor residue at position 3 (according to Kabat et al. (supra)).
[0043] Preferably, in a CDR-grafted antibody molecule of the present invention, if the acceptor heavy chain has the human DP7+JH4 sequence (shown in FIG. 6) (SEQ ID NO:21 (DP7) plus SEQ ID NO:22 (JH4)), then the acceptor framework regions of the heavy chain comprise, in addition to one or more donor CDRs, donor residues at positions 1, 28, 48, 71 and 93 and may additionally comprise donor residues at positions 67 and 69 (according to Kabat et al. (supra)).
[0044] Donor residues are residues from the donor antibody, i.e. the antibody from which the CDRs were originally derived.
[0045] Preferably, the antibody of the present invention comprises a heavy chain wherein the variable domain comprises as CDR-H2 (as defined by Kabat et al., (supra)) an H2' in which a potential glycosylation site sequence has been removed in order to increase the affinity of the chimeric 5/44 antibody for the CD22 antigen and which preferably has as CDR-H2 the sequence given as H2' (SEQ ID NO:13).
[0046] Alternatively or additionally, the antibody of the present invention may comprise a heavy chain wherein the variable domain comprises as CDR-H2 (as defined by Kabat et al., (supra)) an H2'' in which a lysine residue at position 60, which is located at an exposed position within CDR-H2 and which is considered to have the potential to react with conjugation agents resulting in a reduction of antigen binding affinity, is substituted for an alternative amino acid. Preferably CDR-H2 has the sequence given as H2'' (SEQ ID NO:15).
[0047] Alternatively or additionally, the antibody of the present invention may comprise a heavy chain wherein the variable domain comprises as CDR-H2 (as defined by Kabat et al., (supra)) an H2''' in which both the potential glycosylation site sequence and the lysine residue at position 60, are substituted for alternative amino acids. Preferably CDR-H2 has the sequence given as H2''' (SEQ ID NO:16).
[0048] The antibody molecule of the present invention may comprise: a complete antibody molecule, having full length heavy and light chains; a fragment thereof, such as a Fab, modified Fab, Fab', F(ab').sub.2 or Fv fragment; a light chain or heavy chain monomer or dimer; a single chain antibody, e.g. a single chain Fv in which the heavy and light chain variable domains are joined by a peptide linker. Similarly, the heavy and light chain variable regions may be combined with other antibody domains as appropriate.
[0049] The antibody molecule of the present invention may have an effector or a reporter molecule attached to it. For instance, it may have a macrocycle, for chelating a heavy metal atom, or a toxin, such as ricin, attached to it by a covalent bridging structure. Alternatively, procedures of recombinant DNA technology may be used to produce an antibody molecule in which the Fc fragment (CH2, CH3 and hinge domains), the CH2 and CH3 domains or the CH3 domain of a complete immunoglobulin molecule has (have) been replaced by, or has (have) attached thereto by peptide linkage, a functional non-immunoglobulin protein, such as an enzyme or toxin molecule.
[0050] The antibody molecule of the present invention preferably has a binding affinity of at least 0.85.times.10.sup.-10 M, more preferably at least 0.75.times.10.sup.-10 M and most preferably at least 0.5.times.10.sup.-10 M.
[0051] Preferably, the antibody molecule of the present invention comprises the light chain variable domain 5/44-gL1 (SEQ ID NO:19) and the heavy chain variable domain 5/44-gH7 (SEQ ID NO:27). The sequences of the variable domains of these light and heavy chains are shown in FIGS. 5 and 6, respectively.
[0052] The present invention also relates to variants of the antibody molecule of the present invention, which have an improved affinity for CD22. Such variants can be obtained by a number of affinity maturation protocols including mutating the CDRs (Yang et al., J. Mol. Biol., 254, 392-403, 1995), chain shuffling (Marks et al., Bio/Technology, 10, 779-783, 1992), use of mutator strains of E. coli (Low et al., J. Mol. Biol., 250, 359-368, 1996), DNA shuffling (Patten et al., Curr. Opin. Biotechnol., 8, 724-733, 1997), phage display (Thompson et al., J. Mol. Biol., 256, 77-88, 1996) and sexual PCR (Crameri et al., Nature, 391, 288-291, 1998). Vaughan et al. (supra) discusses these methods of affinity maturation.
[0053] The present invention also provides a DNA sequence encoding the heavy and/or light chain(s) of the antibody molecule of the present invention.
[0054] Preferably, the DNA sequence encodes the heavy or the light chain of the antibody molecule of the present invention.
[0055] The DNA sequence of the present invention may comprise synthetic DNA, for instance produced by chemical processing, cDNA, genomic DNA or any combination thereof.
[0056] The present invention also relates to a cloning or expression vector comprising one or more DNA sequences of the present invention. Preferably, the cloning or expression vector comprises two DNA sequences, encoding the light chain and the heavy chain of the antibody molecule of the present invention, respectively.
[0057] General methods by which the vectors may be constructed, transfection methods and culture methods are well known to those skilled in the art. In this respect, reference is made to "Current Protocols in Molecular Biology", 1999, F. M. Ausubel (ed), Wiley Interscience, New York and the Maniatis Manual produced by Cold Spring Harbor Publishing.
[0058] DNA sequences which encode the antibody molecule of the present invention can be obtained by methods well known to those skilled in the art. For example, DNA sequences coding for part or all of the antibody heavy and light chains may be synthesised as desired from the determined DNA sequences or on the basis of the corresponding amino acid sequences.
[0059] DNA coding for acceptor framework sequences is widely available to those skilled in the art and can be readily synthesised on the basis of their known amino acid sequences.
[0060] Standard techniques of molecular biology may be used to prepare DNA sequences coding for the antibody molecule of the present invention. Desired DNA sequences may be synthesised completely or in part using oligonucleotide synthesis techniques. Site-directed mutagenesis and polymerase chain reaction (PCR) techniques may be used as appropriate.
[0061] Any suitable host cell/vector system may be used for expression of the DNA sequences encoding the antibody molecule of the present invention. Bacterial, for example E. coli, and other microbial systems may be used, in part, for expression of antibody fragments such as Fab and F(ab').sub.2 fragments, and especially Fv fragments and single chain antibody fragments, for example, single chain Fvs. Eukaryotic, e.g. mammalian, host cell expression systems may be used for production of larger antibody molecules, including complete antibody molecules. Suitable mammalian host cells include CHO, myeloma or hybridoma cells.
[0062] The present invention also provides a process for the production of an antibody molecule according to the present invention comprising culturing a host cell containing a vector of the present invention under conditions suitable for leading to expression of protein from DNA encoding the antibody molecule of the present invention, and isolating the antibody molecule.
[0063] The antibody molecule may comprise only a heavy or light chain polypeptide, in which case only a heavy chain or light chain polypeptide coding sequence needs to be used to transfect the host cells. For production of products comprising both heavy and light chains, the cell line may be transfected with two vectors, a first vector encoding a light chain polypeptide and a second vector encoding a heavy chain polypeptide. Alternatively, a single vector may be used, the vector including sequences encoding light chain and heavy chain polypeptides.
[0064] The present invention also provides a therapeutic or diagnostic composition comprising an antibody molecule of the present invention in combination with a pharmaceutically acceptable excipient, diluent or carrier.
[0065] The present invention also provides a process for preparation of a therapeutic or diagnostic composition comprising admixing the antibody molecule of the present invention together with a pharmaceutically acceptable excipient, diluent or carrier.
[0066] The antibody molecule may be the sole active ingredient in the therapeutic or diagnostic composition or may be accompanied by other active ingredients including other antibody ingredients, for example anti-T cell, anti-IFN.gamma. or anti-LPS antibodies, or non-antibody ingredients such as xanthines.
[0067] The pharmaceutical compositions preferably comprise a therapeutically effective amount of the antibody of the invention. The term "therapeutically effective amount" as used herein refers to an amount of a therapeutic agent needed to treat, ameliorate or prevent a targeted disease or condition, or to exhibit a detectable therapeutic or preventative effect. For any antibody, the therapeutically effective dose can be estimated initially either in cell culture assays or in animal models, usually in rodents, rabbits, dogs, pigs or primates. The animal model may also be used to determine the appropriate concentration range and route of administration. Such information can then be used to determine useful doses and routes for administration in humans.
[0068] The precise effective amount for a human subject will depend upon the severity of the disease state, the general health of the subject, the age, weight and gender of the subject, diet, time and frequency of administration, drug combination(s), reaction sensitivities and tolerance/response to therapy. This amount can be determined by routine experimentation and is within the judgement of the clinician. Generally, an effective dose will be from 0.01 mg/kg to 50 mg/kg, preferably 0.1 mg/kg to 20 mg/kg, more preferably about 15 mg/kg.
[0069] Compositions may be administered individually to a patient or may be administered in combination with other agents, drugs or hormones.
[0070] The dose at which the antibody molecule of the present invention is administered depends on the nature of the condition to be treated, the grade of the malignant lymphoma or leukaemia and on whether the antibody molecule is being used prophylactically or to treat an existing condition.
[0071] The frequency of dose will depend on the half-life of the antibody molecule and the duration of its effect. If the antibody molecule has a short half-life (e.g. 2 to 10 hours) it may be necessary to give one or more doses per day. Alternatively, if the antibody molecule has a long half life (e.g. 2 to 15 days) it may only be necessary to give a dosage once per day, once per week or even once every 1 or 2 months.
[0072] A pharmaceutical composition may also contain a pharmaceutically acceptable carrier for administration of the antibody. The carrier should not itself induce the production of antibodies harmful to the individual receiving the composition and should not be toxic. Suitable carriers may be large, slowly metabolised macromolecules such as proteins, polypeptides, liposomes, polysaccharides, polylactic acids, polyglycolic acids, polymeric amino acids, amino acid copolymers and inactive virus particles.
[0073] Pharmaceutically acceptable salts can be used, for example mineral acid salts, such as hydrochlorides, hydrobromides, phosphates and sulphates, or salts of organic acids, such as acetates, propionates, malonates and benzoates.
[0074] Pharmaceutically acceptable carriers in therapeutic compositions may additionally contain liquids such as water, saline, glycerol and ethanol. Additionally, auxiliary substances, such as wetting or emulsifying agents or pH buffering substances, may be present in such compositions. Such carriers enable the pharmaceutical compositions to be formulated as tablets, pills, dragees, capsules, liquids, gels, syrups, slurries and suspensions, for ingestion by the patient.
[0075] Preferred forms for administration include forms suitable for parenteral administration, e.g. by injection or infusion, for example by bolus injection or continuous infusion. Where the product is for injection or infusion, it may take the form of a suspension, solution or emulsion in an oily or aqueous vehicle and it may contain formulatory agents, such as suspending, preservative, stabilising and/or dispersing agents. Alternatively, the antibody molecule may be in dry form, for reconstitution before use with an appropriate sterile liquid.
[0076] Once formulated, the compositions of the invention can be administered directly to the subject. The subjects to be treated can be animals. However, it is preferred that the compositions are adapted for administration to human subjects.
[0077] The pharmaceutical compositions of this invention may be administered by any number of routes including, but not limited to, oral, intravenous, intramuscular, intra-arterial, intramedullary, intrathecal, intraventricular, transdermal, transcutaneous (for example, see WO98/20734), subcutaneous, intraperitoneal, intranasal, enteral, topical, sublingual, intravaginal or rectal routes. Hyposprays may also be used to administer the pharmaceutical compositions of the invention. Typically, the therapeutic compositions may be prepared as injectables, either as liquid solutions or suspensions. Solid forms suitable for solution in, or suspension in, liquid vehicles prior to injection may also be prepared.
[0078] Direct delivery of the compositions will generally be accomplished by injection, subcutaneously, intraperitoneally, intravenously or intramuscularly, or delivered to the interstitial space of a tissue. The compositions can also be administered into a lesion. Dosage treatment may be a single dose schedule or a multiple dose schedule.
[0079] It will be appreciated that the active ingredient in the composition will be an antibody molecule. As such, it will be susceptible to degradation in the gastrointestinal tract. Thus, if the composition is to be administered by a route using the gastrointestinal tract, the composition will need to contain agents which protect the antibody from degradation but which release the antibody once it has been absorbed from the gastrointestinal tract.
[0080] A thorough discussion of pharmaceutically acceptable carriers is available in Remington's Pharmaceutical Sciences (Mack Publishing Company, N.J. 1991).
[0081] It is also envisaged that the antibody of the present invention will be administered by use of gene therapy. In order to achieve this, DNA sequences encoding the heavy and light chains of the antibody molecule under the control of appropriate DNA components are introduced into a patient such that the antibody chains are expressed from the DNA sequences and assembled in situ.
[0082] The present invention also provides the antibody molecule of the present invention for use in treating a disease mediated by cells expressing CD22.
[0083] The present invention further provides the use of the antibody molecule according to the present invention in the manufacture of a medicament for the treatment of a disease mediated by cells expressing CD22.
[0084] The antibody molecule of the present invention may be utilised in any therapy where it is desired to reduce the level of cells expressing CD22 that are present in the human or animal body. These CD22-expressing cells may be circulating in the body or be present in an undesirably high level localised at a particular site in the body. For example, elevated levels of cells expressing CD22 will be present in B cell lymphomas and leukaemias. The antibody molecule of the present invention may be utilised in the therapy of diseases mediated by cells expressing CD22.
[0085] The antibody molecule of the present invention is preferably used for treatment of malignant lymphomas and leukaemias, most preferably NHL.
[0086] The present invention also provides a method of treating human or animal subjects suffering from or at risk of a disorder mediated by cells expressing CD22, the method comprising administering to the subject an effective amount of the antibody molecule of the present invention.
[0087] The antibody molecule of the present invention may also be used in diagnosis, for example in the in vivo diagnosis and imaging of disease states involving cells that express CD22.
[0088] The present invention is further described by way of illustration only in the following examples, which refer to the accompanying Figures, in which:
[0089] FIG. 1 shows the amino acid sequence of the CDRs of mouse monoclonal antibody 5/44 (SEQ ID NOs:1 to 6);
[0090] FIG. 2 shows the complete sequence of the light chain variable domain of mouse monoclonal antibody 5/44 (nucleotide sequence-SEQ ID NO:48; amino acid sequence-SEQ ID NO: 7); antisense nucleotide strand-SEQ ID NO:67;
[0091] FIG. 3 shows the complete sequence of the heavy chain variable domain of mouse monoclonal antibody 5/44 (nucleotide sequence-SEQ ID NO:49; amino acid sequence-SEQ ID NO:8); antisense nucleotide strand-SEQ ID NO:68;
[0092] FIG. 4 shows the strategy for removal of the glycosylation site and reactive lysine in CDR-H2 (SEQ ID NOs:9-12);
[0093] FIG. 5 shows the graft design for the 5/44 light chain sequence (V.sub.L-SEQ ID NO:7; DPK9-SEQ ID NO:17, SEQ ID NO:69, and SEQ ID NO:70, respectively; JK1-SEQ ID NO:18 gL1-SEQ ID NO:19; and gL2-SEQ ID NO:20);
[0094] FIG. 6 shows the graft design for the 5/44 heavy chain sequence (V.sub.H-SEQ ID NO:8, DP7-SEQ ID NO:24, gH5-SEQ ID NO:25, gH6-SEQ ID NO:26, gH7-SEQ ID NO:27, and JH4-SEQ ID NO:22);
[0095] FIGS. 7A-7B show the vectors pMRR14 and pMRR10.1;
[0096] FIG. 8 shows the Biacore assay results of the chimeric 5/44 mutants;
[0097] FIG. 9 shows the oligonucleotides for 5/44 gH1 (SEQ ID NOs:32-39, respectively) and gL1 (SEQ ID NOs:40-47, respectively) gene assemblies;
[0098] FIGS. 10A-10B show the intermediate vectors pCR2.1(544gH1) and pCR2.1(544gL1);
[0099] FIG. 11 shows the oligonucleotide cassettes used to make further grafts (gH4-SEQ ID NOs:52, 53, and 62, respectively, gH5-SEQ ID NOs:54, 55, and 63, respectively; gH6-SEQ ID NOs:56, 57, and 64, respectively; gH7-SEQ ID NOs: 58, 59, and 65, respectively; and gL2-SEQ ID NOs:60, 61, and 66, respectively;
[0100] FIGS. 12A-12B show the competition assay between fluorescently labelled mouse 5/44 antibody and grafted variants; and
[0101] FIG. 13 shows the full DNA and protein sequence of the grafted heavy and light chains--a) SEQ ID NO:30 (amino acid), SEQ ID NO:31 (nucleotide), and SEQ ID NO:63 (antisense nucleotide strand); b) SEQ ID NO: 28 (amino acid), SEQ ID NO:29 (nucleotide), and SEQ ID NO:74 (antisense strand).
DETAILED DESCRIPTION OF THE INVENTION
Example 1
Generation of Candidate Antibodies
[0102] A panel of antibodies against CD22 were selected from hybridomas using the following selection criteria: binding to Daudi cells, internalisation on Daudi cells, binding to peripheral blood mononuclear cells (PBMC), internalisation on PBMC, affinity (greater than 10.sup.-9M), mouse .gamma.1 and production rate. 5/44 was selected as the preferred antibody.
Example 2
Gene Cloning and Expression of a Chimeric 5/44 Antibody Molecule
[0103] Preparation of 5/44 Hybridoma Cells and RNA Preparation Therefrom
[0104] Hybridoma 5/44 was generated by conventional hybridoma technology following immunisation of mice with human CD22 protein. RNA was prepared from 5/44 hybridoma cells using a RNEasy kit (Qiagen, Crawley, UK; Catalogue No. 74106). The RNA obtained was reverse transcribed to cDNA, as described below.
[0105] Distribution of CD22 on NHL Tumours
[0106] An immunohistochemistry study was undertaken to examine the incidence and distribution of staining using the 5/44 anti-CD22 monoclonal antibodies. Control anti-CD20 and anti-CD79a antibodies were included in the study to confirm B cell areas of tumours.
[0107] A total of 50 tumours were studied and these were categorised as follows by using the Working Formulation and REAL classification systems:
[0108] 7 B lymphoblastic leukaemia/lymphoma (High/I)
[0109] 4 B-CLL/small lymphocytic lymphoma (Low/A)
[0110] 3 lymphoplasmacytoid/Immunocytoma (Low/A)
[0111] 1 Mantle cell (Int/F)
[0112] 14 Follicle center lymphoma (Low to Int/D)
[0113] 13 Diffuse large cell lymphoma (Int to High/G,H)
[0114] 6 Unclassifiable (K)
[0115] 2 T cell lymphomas
[0116] 40 B cell lymphomas were positive for CD22 antigen with the 5/44 antibody at 0.1 .mu.g/ml and a further 6 became positive when the concentration was increased to 0.5 .mu.g/ml. For the remaining 2 B cell tumours that were negative at 0.1 .mu.g/ml, there was insufficient tissue remaining to test at the higher concentration. However, parallel testing with another Celltech anti-CD22 antibody 6/13, which gave stronger staining than 5/44, resulted in all 48 B cell lymphomas staining positive for CD22.
[0117] Thus, it is possible to conclude that the CD22 antigen is widely expressed on B cell lymphomas and thus provides a suitable target for immunotherapy in NHL.
[0118] PCR Cloning of 5/44 V.sub.H and V.sub.L
[0119] cDNA sequences coding for the variable domains of 5/44 heavy and light chains were synthesised using reverse transcriptase to produce single stranded cDNA copies of the mRNA present in the total RNA. This was then used as the template for amplification of the murine V-region sequences using specific oligonucleotide primers by the Polymerase Chain Reaction (PCR).
[0120] a) cDNA Synthesis
[0121] cDNA was synthesised in a 20 .mu.l reaction volume containing the following reagents: 50 mM Tris-HCl pH 8.3, 75 mM KCl, 10 mM dithiothreitol, 3 mM MgCl.sub.2, 0.5 mM each deoxyribonucleoside triphosphate, 20 units RNAsin, 75 ng random hexanucleotide primer, 2 .mu.g 5/44 RNA and 200 units Moloney Murine Leukemia Virus reverse transcriptase. After incubation at 42.degree. C. for 60 minutes, the reaction was terminated by heating at 95.degree. C. for 5 minutes.
[0122] b) PCR
[0123] Aliquots of the cDNA were subjected to PCR using combinations of primers specific for the heavy and light chains. Degenerate primer pools designed to anneal with the conserved sequences of the signal peptide were used as forward primers. These sequences all contain, in order, a restriction site (V.sub.L SfuI; V.sub.H HindIII) starting 7 nucleotides from their 5' ends, the sequence GCCGCCACC (SEQ ID NO:50), to allow optimal translation of the resulting mRNAs, an initiation codon and 20-30 nucleotides based on the leader peptide sequences of known mouse antibodies (Kabat et al., Sequences of proteins of immunological interest, 5.sup.th Edition, 1991, U.S. Department of Health and Human Services, Public Health Service, National Institutes of Health).
[0124] The 3' primers are designed to span the framework 4 J-C junction of the antibody and contain a restriction site for the enzyme BsiWI to facilitate cloning of the V.sub.L PCR fragment. The heavy chain 3' primers are a mixture designed to span the J-C junction of the antibody. The 3' primer includes an ApaI restriction site to facilitate cloning. The 3' region of the primers contains a mixed sequence based on those found in known mouse antibodies (Kabat et al., 1991, supra).
[0125] The combinations of primers described above enable the PCR products for V.sub.H and V1 to be cloned directly into an appropriate expression vector (see below) to produce chimeric (mouse-human) heavy and light chains and for these genes to be expressed in mammalian cells to produce chimeric antibodies of the desired isotype.
[0126] Incubations (100 .mu.l) for the PCR were set up as follows. Each reaction contained 10 mM Tris-HCl pH 8.3, 1.5 mM MgCl2, 50 mM KCl, 0.01% w/v gelatin, 0.25 mM each deoxyribonucleoside triphosphate, 10 pmoles 5' primer mix, 10 pmoles 3' primer, 1 .mu.l cDNA and 1 unit Taq polymerase. Reactions were incubated at 95.degree. C. for 5 minutes and then cycled through 94.degree. C. for 1 minute, 55.degree. C. for 1 minute and 72.degree. C. for 1 minute. After 30 cycles, aliquots of each reaction were analysed by electrophoresis on an agarose gel.
[0127] For the heavy chain V-region, an amplified DNA product was only obtained when a primer pool annealing within the start of framework I replaced the signal peptide primer pool. The fragments were cloned into DNA sequencing vectors. The DNA sequence was determined and translated to give a deduced amino acid sequence. This deduced sequence was verified by reference to the N-terminal protein sequence determined experimentally. FIGS. 2 and 3 shows the DNA/protein sequence of the mature light and heavy chain V-regions of mouse monoclonal 5/44 respectively.
[0128] c) Molecular Cloning of the PCR Fragments
[0129] The murine v-region sequences were then cloned into the expression vectors pMRR10.1 and pMRR14 (FIG. 7). These are vectors for the expression of light and heavy chain respectively containing DNA encoding constant regions of human kappa light chain and human gamma-4 heavy chain. The V.sub.L region was sub-cloned into the expression vector by restriction digest and ligation from the sequencing vector, using SfuI and BsiWI restriction sites, creating plasmid pMRR10(544cL). The heavy chain DNA was amplified by PCR using a 5' primer to introduce a signal peptide, since this was not obtained in the cloning strategy--a mouse heavy chain antibody leader from a different in-house hybridoma (termed 162) was employed. The 5' primer had the following sequence:
TABLE-US-00001 (SEQ ID NO: 51) 5'GCGCGCAAGCTTGCCGCCACCATGGACTTCGGATTCTCTCTCGTGTT CCTGGCACTCATTCTCAAGGGAGTGCAGTGTGAGGTGCAGCTCGTCGAG TCTGG3'.
[0130] The reverse primer was identical to that used in the original V.sub.H gene cloning. The resultant PCR product was digested with enzymes HindIII and ApaI, was sub-cloned, and its DNA sequence was confirmed, creating plasmid pMRR14(544cH). Transient co-transfection of both expression vectors into CHO cells generated chimeric c5/44 antibody. This was achieved using the Lipofectamine reagent according to the manufacturer's protocols (InVitrogen:Life Technology, Groningen, The Netherlands. Catalogue no. 11668-027).
[0131] Removal of Glycosylation Site and Reactive Lysine
[0132] A potential N-linked glycosylation site sequence was observed in CDR-H2, having the amino acid sequence N-Y-T (FIG. 3). SDS-PAGE, Western blotting and carbohydrate staining of gels of 5/44 and its fragments (including Fab) indicated that this site was indeed glycosylated (not shown). In addition, a lysine residue was observed at an exposed position within CDR-H2, which had the potential to reduce the binding affinity of the antibody by providing an additional site for conjugation with an agent with which the antibody may be conjugated.
[0133] A PCR strategy was used to introduce amino acid substitutions into the CDR-H2 sequence in an attempt to remove the glycosylation site and/or the reactive lysine, as shown in FIG. 4. Forward primers encoding the mutations N55Q, T57A or T57V were used to remove the glycosylation site (FIG. 4) and a fourth forward primer containing the substitution K60R, was generated to remove the reactive lysine residue (FIG. 4). A framework 4 reverse primer was used in each of these PCR amplifications. The PCR products were digested with the enzymes XbaI and ApaI and were inserted into pMRR14(544cH) (also cleaved with XbaI and ApaI) to generate expression plasmids encoding these mutants. The N55Q, T57A and T57V mutations ablate the glycosylation site by changing the amino acid sequence away from the consensus N-X-T/S whilst the K60R mutation replaces the potentially reactive lysine with the similarly positively charged residue arginine. The resultant cH variant plasmids were co-transfected with the cL plasmid to generate expressed chimeric antibody variants.
[0134] Evaluation of Activities of Chimeric Genes
[0135] The activities of the chimeric genes were evaluated following transient transfection into CHO cells.
[0136] c) Determination of Affinity Constants by BiaCore Analysis.
[0137] The affinities of chimeric 5/44 or its variants, which have had their glycosylation site or their reactive lysine removed, were investigated using BIA technology for binding to CD22-mFc constructs. The results are shown in FIG. 8. All binding measurements were performed in the BIAcore.TM. 2000 instrument (Pharmacia Biosensor AB, Uppsala, Sweden). The assay was performed by capture of CD22mFc via the immobilised anti-mouse Fc. The antibody was in the soluble phase. Samples, standard, and controls (50 ul) were injected over immobilised anti-mouse Fc followed by antibody in the soluble phase. After each cycle the surface was regenerated with 50 ul of 40 mM HCl at 30 ul/min. The kinetic analysis was performed using the BIAevaluation 3.1 software (Pharmacia).
[0138] Removal of the glycosylation site in construct T57A resulted in a slightly faster on-rate and a significantly slower off-rate compared to the chimeric 5/44, giving an affinity improvement of approximately 5-fold. The N55Q mutation had no effect on affinity. This result was unexpected as it suggests that the removal of the carbohydrate itself apparently has no effect on binding (as with the N55Q change). The improved affinity was observed only with the T57A change. One possible explanation is that, regardless of the presence of carbohydrate, the threonine at position 57 exerts a negative effect on binding that is removed on conversion of threonine to alanine. The hypothesis that the small size of alanine is important, and that the negative effect of threonine is related to its size, is supported from the result obtained using the T57V mutation: that replacement with valine at position 57 is not beneficial (results not shown).
[0139] Removal of the lysine by the K60R mutation had a neutral effect on affinity, i.e. the introduction of arginine removes a potential reactive site without compromising affinity.
[0140] The mutations for removal of the glycosylation site and for removal of the reactive lysine were therefore both included in the humanisation design.
Example 2
CDR-Grafting of 5/44
[0141] The molecular cloning of genes for the variable regions of the heavy and light chains of the 5/44 antibody and their use to produce chimeric (mouse/human) 5/44 antibodies has been described above. The nucleotide and amino acid sequences of the mouse 5/44 V.sub.L and V.sub.H domains are shown in FIGS. 2 and 3 (SEQ ID NOs:7 and 8), respectively. This example describes the CDR-grafting of the 5/44 antibody onto human frameworks to reduce potential immunogenicity in humans, according to the method of Adair et al., (WO91/09967).
[0142] CDR-Grafting of 5/44 Light Chain
[0143] Protein sequence alignment with consensus sequences from human sub-group I kappa light chain V region indicated 64% sequence identity. Consequently, for constructing the CDR-grafted light chain, the acceptor framework regions chosen corresponded to those of the human VK sub-group I germline O12,DPK9 sequence. The framework 4 acceptor sequence was derived from the human J-region germline sequence JK1.
[0144] A comparison of the amino acid sequences of the framework regions of murine 5/44 and the acceptor sequence is given in FIG. 5 and shows that there are 27 differences between the donor and acceptor chains. At each position, an analysis was made of the potential of the murine residue to contribute to antigen binding, either directly or indirectly, through effects on packing or at the V.sub.H/V.sub.L interface. If a murine residue was considered important and sufficiently different from the human residue in terms of size, polarity or charge, then that murine residue was retained. Based on this analysis, two versions of the CDR-grafted light chain, having the sequences given in SEQ ID NO:19 and SEQ ID NO:20 (FIG. 5), were constructed.
[0145] CDR-Grafting of 5/44 Heavy Chain
[0146] CDR-grafting of 5/44 heavy chain was accomplished using the same strategy as described for the light chain. The V-domain of 5/44 heavy chain was found to be homologous to human heavy chains belonging to sub-group I (70% sequence identity) and therefore the sequence of the human sub-group I germline framework VH1-3,DP7 was used as an acceptor framework. The framework 4 acceptor sequences were derived from human J-region germline sequence JH4.
[0147] A comparison of 5/44 heavy chain with the framework regions is shown in FIG. 6 where it can be seen that the 5/44 heavy chain differs from the acceptor sequence at 22 positions. Analysis of the contribution that any of these might make to antigen binding led to 5 versions of the CDR-grafted heavy chains being constructed, having the sequences given in SEQ ID NO:23, SEQ ID NO:24, SEQ ID NO:25, SEQ ID NO:26 and SEQ ID NO:27 (FIG. 6).
[0148] Construction of Genes for Grafted Sequences.
[0149] Genes were designed to encode the grafted sequences gH1 and gL1, and a series of overlapping oligonucleotides were designed and constructed (FIG. 9). A PCR assembly technique was employed to construct the CDR-grafted V-region genes. Reaction volumes of 100 ul were set up containing 10 mM Tris-HCl pH8.3, 1.5 mM MgCl2, 50 mM KCl, 0.001% gelatin, 0.25 mM each deoxyribonucleoside triphosphate, 1 pmole each of the `internal` primers (T1, T2, T3, B1, B2, B3), 10 pmole each of the `external` primers (F1, R1), and 1 unit of Taq polymerase (AmpliTaq, Applied BioSystems, catalogue no. N808-0171). PCR cycle parameters were 94.degree. C. for 1 minute, 55.degree. C. for 1 minute and 72.degree. C. for 1 minute, for 30 cycles. The reaction products were then run on a 1.5% agarose gel, excised and recovered using QIAGEN.RTM. spin columns (QIAquick.RTM. gel extraction kit, cat no. 28706). The DNA was eluted in a volume of 30 Aliquots (1 .mu.l) of the gH1 and gL1 DNA were then cloned into the InVitrogen TOPO.RTM. TA cloning vector pCR2.1 TOPO.RTM. (catalogue no. K4500-01) according to the manufacturer's instructions. This non-expression vector served as a cloning intermediate to facilitate sequencing of a large number of clones. DNA sequencing using vector-specific primers was used to identify correct clones containing gH1 and gL1, creating plasmids pCR2.1 (544gH1) and pCR2.1(544gL1) (FIG. 10).
[0150] An oligonucleotide cassette replacement method was used to create the humanised grafts gH4,5,6 and 7, and gL2. FIG. 11 shows the design of the oligonucleotide cassettes. To construct each variant, the vector (pCR2.1(544gH1) or pCR2.1(544gL1)) was cut with the restriction enzymes shown (XmaI/SacII for the heavy chain, XmaI/BstEII for the light chain). The large vector fragment was gel purified from agarose and was used in ligation with the oligonucleotide cassette. These cassettes are composed of 2 complementary oligonucleotides (shown in FIG. 11), mixed at a concentration of 0.5 pmoles/.mu.l in a volume of 200 .mu.l 12.5 mM Tris-HCl pH 7.5, 2.5 mM MgCl.sub.2, 25 mM NaCl, 0.25 mM dithioerythritol. Annealing was achieved by heating to 95.degree. C. for 3 minutes in a waterbath (volume 500 ml) then allowing the reaction to slow-cool to room temperature. The annealed oligonucleotide cassette was then diluted ten-fold in water before ligation into the appropriately cut vector. DNA sequencing was used to confirm the correct sequence, creating plasmids pCR2.1 (5/44-gH4-7) and pCR2.1(5/44-gL2). The verified grafted sequences were then sub-cloned into the expression vectors pMRR14 (heavy chain) and pMR10.1 (light chain).
[0151] CD22 Binding Activity of CDR-Grafted Sequences
[0152] The vectors encoding grafted variants were co-transfected into CHO cells in a variety of combinations, together with the original chimeric antibody chains. Binding activity was compared in a competition assay, competing the binding of the original mouse 5/44 antibody for binding to Ramos cells (obtained from ATCC, a Burkitt's lymphoma lymphoblast human cell line expressing surface CD22). This assay was considered the best way to compare grafts in their ability to bind to cell surface CD22. The results are shown in FIG. 8. As can be seen, there is very little difference between any of the grafts, all performing more effectively than the chimeric at competing against the murine parent. The introduction of the 3 additional human residues at the end of CDR H2 (gH6 and gH7) does not appear to have affected binding.
[0153] The graft combination with the least number of murine residues was selected, gL1gH7. The light chain graft gL1 has 6 donor residues. Residues V2, V4, L37 and Q45 are potentially important packing residues. Residue H38 is at the V.sub.H/V.sub.L interface. Residue D60 is a surface residue close to the CDR-L2 and may directly contribute to antigen binding. Of these residues, V2, L37, Q45 and D60 are found in germline sequences of human kappa genes from other sub-groups. The heavy chain graft gH7 has 4 donor framework residues (Residue R28 is considered to be part of CDR-H1 under the structural definition used in CDR-grafting (se Adair et al (1991 WO91/09967)). Residues E1 and A71 are surface residues close to the CDR's. Residue 148 is a potential packing residue. Residue T93 is present at the V.sub.H/V.sub.L interface. Of these residues, E1 and A71 are found in other germline genes of human sub-group I. Residue 148 is found in human germline sub-group 4, and T73 is found in human germline sub-group 3.
[0154] The full DNA and protein sequence of both the light chain and heavy chain, including approximate position of introns within the constant region genes provided by the vectors, are shown in FIG. 13 and are given in SEQ ID NO:29 and SEQ ID NO:28 respectively for the light chain and SEQ ID NO:31 and SEQ ID NO:30 respectively for the heavy chain.
[0155] DNA encoding these light and heavy chain genes was excised from these vectors. Heavy chain DNA was digested at the 5' HindIII site, then was treated with the Klenow fragment of E. coli DNA polymerase I to create a 5' blunt end. Cleavage at the 3' EcoRI site resulted in the heavy chain fragment which was purified from agarose gels. In the same way, a light chain fragment was produced, blunted at the 5' SfuI site and with a 3' EcoRI site. Both fragments were cloned into DHFR based expression vectors and used to generate stable cell lines in CHO cells.
[0156] All references and patents cited herein are hereby incorporated by reference in their entireties.
Sequence CWU
1
1
7415PRTmus musculusDOMAINmouse monoclonal 5/44 CDR-H1 1Asn Tyr Trp Ile His
1 5 217PRTmus musculusDOMAINmouse monoclonal 5/44 CDR-H2
2Gly Ile Asn Pro Gly Asn Asn Tyr Thr Thr Tyr Lys Arg Asn Leu Lys 1
5 10 15 Gly 312PRTmus
musculusDOMAINmouse monoclonal 5/44 CDR-H3 3Glu Gly Tyr Gly Asn Tyr Gly
Ala Trp Phe Ala Tyr 1 5 10
416PRTmus musculusDOMAINmouse monoclonal 5/44 CDR-L1 4Arg Ser Ser Gln Ser
Leu Ala Asn Ser Tyr Gly Asn Thr Phe Leu Ser 1 5
10 15 57PRTmus musculusDOMAINmouse monoclonal
5/44 CDR-L2 5Gly Ile Ser Asn Arg Phe Ser 1 5
69PRTmus musculusDOMAINmouse monoclonal 5/44 CDR-L3 6Leu Gln Gly Thr His
Gln Pro Tyr Thr 1 5 7113PRTmus
musculusDOMAINmouse monoclonal 5/44 VL domain 7Asp Val Val Val Thr Gln
Thr Pro Leu Ser Leu Pro Val Ser Phe Gly 1 5
10 15 Asp Gln Val Ser Ile Ser Cys Arg Ser Ser Gln
Ser Leu Ala Asn Ser 20 25
30 Tyr Gly Asn Thr Phe Leu Ser Trp Tyr Leu His Lys Pro Gly Gln
Ser 35 40 45 Pro
Gln Leu Leu Ile Tyr Gly Ile Ser Asn Arg Phe Ser Gly Val Pro 50
55 60 Asp Arg Phe Thr Gly Ser
Gly Ser Gly Thr Asp Phe Thr Leu Lys Ile 65 70
75 80 Ser Thr Ile Lys Pro Glu Asp Leu Gly Met Tyr
Tyr Cys Leu Gln Gly 85 90
95 Thr His Gln Pro Tyr Thr Phe Gly Gly Gly Thr Lys Leu Glu Ile Lys
100 105 110 Arg
8121PRTmus musculusDOMAINmouse monoclonal 5/44 VH domain 8Glu Val Gln Leu
Gln Gln Ser Gly Thr Val Leu Ala Arg Pro Gly Ala 1 5
10 15 Ser Val Lys Met Ser Cys Lys Ala Ser
Gly Tyr Arg Phe Thr Asn Tyr 20 25
30 Trp Ile His Trp Val Lys Gln Arg Pro Gly Gln Gly Leu Glu
Trp Ile 35 40 45
Gly Gly Ile Asn Pro Gly Asn Asn Tyr Thr Thr Tyr Lys Arg Asn Leu 50
55 60 Lys Gly Lys Ala Thr
Leu Thr Ala Val Thr Ser Ala Ser Thr Ala Tyr 65 70
75 80 Met Asp Leu Ser Ser Leu Thr Ser Glu Asp
Ser Ala Val Tyr Tyr Cys 85 90
95 Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala Tyr Trp
Gly 100 105 110 Gln
Gly Thr Leu Val Thr Val Ser Ser 115 120
913PRTArtificial sequenceChemically synthesized 9Gly Asn Asn Tyr Thr Thr
Tyr Lys Arg Asn Leu Lys Gly 1 5 10
1013PRTArtificial Sequencechemically synthesizedCDR-H2 MUTATION
N55Q 10Gly Asn Gln Tyr Thr Thr Tyr Lys Arg Asn Leu Lys Gly 1
5 10 1113PRTArtificial Sequencechemically
synthesizedCDR-H2 MUTATION T57A 11Gly Asn Asn Tyr Ala Thr Tyr Lys Arg Asn
Leu Lys Gly 1 5 10
1213PRTArtificial Sequencechemically synthesizedCDR-H2 MUTATION T57V
12Gly Asn Asn Tyr Val Thr Tyr Lys Arg Asn Leu Lys Gly 1 5
10 1317PRTArtificial Sequencechemically
synthesizedCDR-H2 MUTATION (T57A) H Single Prime 13Gly Ile Asn Pro
Gly Asn Asn Tyr Ala Thr Tyr Lys Arg Asn Leu Lys 1 5
10 15 Gly 1413PRTArtificial
Sequencechemically synthesizedCDR-H2 MUTATION K60R 14Gly Asn Asn Tyr Thr
Thr Tyr Arg Arg Asn Leu Lys Gly 1 5 10
1517PRTArtificial Sequencechemically synthesizedCDR-H2 MUTATION
(K60R) H Double Prime 15Gly Ile Asn Pro Gly Asn Asn Tyr Thr Thr Tyr
Arg Arg Asn Leu Lys 1 5 10
15 Gly 1617PRTArtificial Sequencechemically synthesizedCDR-H2
MUTATION (T57A K60R) H Triple Prime 16Gly Ile Asn Pro Gly Asn Asn
Tyr Ala Thr Tyr Arg Arg Asn Leu Lys 1 5
10 15 Gly 1723PRTHomo sapiens 17Asp Ile Gln Met Thr
Gln Ser Pro Ser Ser Leu Ser Ala Ser Val Gly 1 5
10 15 Asp Arg Val Thr Ile Thr Cys
20 1811PRTHomo sapiens 18Phe Gly Gln Gly Thr Lys Val Glu Ile
Lys Arg 1 5 10 19113PRTArtificial
Sequencechemically synthesizedgL1 19Asp Val Gln Val Thr Gln Ser Pro Ser
Ser Leu Ser Ala Ser Val Gly 1 5 10
15 Asp Arg Val Thr Ile Thr Cys Arg Ser Ser Gln Ser Leu Ala
Asn Ser 20 25 30
Tyr Gly Asn Thr Phe Leu Ser Trp Tyr Leu His Lys Pro Gly Lys Ala
35 40 45 Pro Gln Leu Leu
Ile Tyr Gly Ile Ser Asn Arg Phe Ser Gly Val Pro 50
55 60 Asp Arg Phe Ser Gly Ser Gly Ser
Gly Thr Asp Phe Thr Leu Thr Ile 65 70
75 80 Ser Ser Leu Gln Pro Glu Asp Phe Ala Thr Tyr Tyr
Cys Leu Gln Gly 85 90
95 Thr His Gln Pro Tyr Thr Phe Gly Gln Gly Thr Lys Val Glu Ile Lys
100 105 110 Arg
20113PRTArtificial Sequencechemically synthesizedgL2 20Asp Val Val Val
Thr Gln Ser Pro Ser Ser Leu Ser Ala Ser Val Gly 1 5
10 15 Asp Arg Val Thr Ile Thr Cys Arg Ser
Ser Gln Ser Leu Ala Asn Ser 20 25
30 Tyr Gly Asn Thr Phe Leu Ser Trp Tyr Leu His Lys Pro Gly
Lys Ala 35 40 45
Pro Gln Leu Leu Ile Tyr Gly Ile Ser Asn Arg Phe Ser Gly Val Pro 50
55 60 Asp Arg Phe Ser Gly
Ser Gly Ser Gly Thr Asp Phe Thr Leu Thr Ile 65 70
75 80 Ser Ser Leu Gln Pro Glu Asp Phe Ala Thr
Tyr Tyr Cys Leu Gln Gly 85 90
95 Thr His Gln Pro Tyr Thr Phe Gly Gln Gly Thr Lys Val Glu Ile
Lys 100 105 110 Arg
2130PRTHomo sapiens 21Gln Val Gln Leu Val Gln Ser Gly Ala Glu Val Lys Lys
Pro Gly Ala 1 5 10 15
Ser Val Lys Val Ser Cys Lys Ala Ser Gly Tyr Thr Phe Thr 20
25 302211PRTHomo sapiens 22Trp Gly Gln
Gly Thr Leu Val Thr Val Ser Ser 1 5 10
23121PRTArtificial Sequencechemically synthesizedgH1 23Glu Val Gln Leu
Val Gln Ser Gly Ala Glu Val Lys Lys Pro Gly Ala 1 5
10 15 Ser Val Lys Val Ser Cys Lys Ala Ser
Gly Tyr Arg Phe Thr Asn Tyr 20 25
30 Trp Ile His Trp Val Arg Gln Ala Pro Gly Gln Gly Leu Glu
Trp Ile 35 40 45
Gly Gly Ile Asn Pro Gly Asn Gln Tyr Thr Thr Tyr Lys Arg Asn Leu 50
55 60 Lys Gly Arg Ala Thr
Leu Thr Ala Asp Thr Ser Thr Ser Thr Val Tyr 65 70
75 80 Met Glu Leu Ser Ser Leu Arg Ser Glu Asp
Thr Ala Val Tyr Tyr Cys 85 90
95 Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala Tyr Trp
Gly 100 105 110 Gln
Gly Thr Leu Val Thr Val Ser Ser 115 120
24121PRTArtificial Sequencechemically synthesizedgH4 24Glu Val Gln Leu
Val Gln Ser Gly Ala Glu Val Lys Lys Pro Gly Ala 1 5
10 15 Ser Val Lys Val Ser Cys Lys Ala Ser
Gly Tyr Arg Phe Thr Asn Tyr 20 25
30 Trp Ile His Trp Val Arg Gln Ala Pro Gly Gln Gly Leu Glu
Trp Ile 35 40 45
Gly Gly Ile Asn Pro Gly Asn Asn Tyr Ala Thr Tyr Arg Arg Asn Leu 50
55 60 Lys Gly Arg Ala Thr
Leu Thr Ala Asp Thr Ser Thr Ser Thr Val Tyr 65 70
75 80 Met Glu Leu Ser Ser Leu Arg Ser Glu Asp
Thr Ala Val Tyr Tyr Cys 85 90
95 Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala Tyr Trp
Gly 100 105 110 Gln
Gly Thr Leu Val Thr Val Ser Ser 115 120
25121PRTArtificial Sequencechemically synthesizedgH5 25Glu Val Gln Leu
Val Gln Ser Gly Ala Glu Val Lys Lys Pro Gly Ala 1 5
10 15 Ser Val Lys Val Ser Cys Lys Ala Ser
Gly Tyr Arg Phe Thr Asn Tyr 20 25
30 Trp Ile His Trp Val Arg Gln Ala Pro Gly Gln Gly Leu Glu
Trp Ile 35 40 45
Gly Gly Ile Asn Pro Gly Asn Asn Tyr Ala Thr Tyr Arg Arg Asn Leu 50
55 60 Lys Gly Arg Val Thr
Met Thr Ala Asp Thr Ser Thr Ser Thr Val Tyr 65 70
75 80 Met Glu Leu Ser Ser Leu Arg Ser Glu Asp
Thr Ala Val Tyr Tyr Cys 85 90
95 Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala Tyr Trp
Gly 100 105 110 Gln
Gly Thr Leu Val Thr Val Ser Ser 115 120
26121PRTArtificial Sequencechemically synthesizedgH6 26Glu Val Gln Leu
Val Gln Ser Gly Ala Glu Val Lys Lys Pro Gly Ala 1 5
10 15 Ser Val Lys Val Ser Cys Lys Ala Ser
Gly Tyr Arg Phe Thr Asn Tyr 20 25
30 Trp Ile His Trp Val Arg Gln Ala Pro Gly Gln Gly Leu Glu
Trp Ile 35 40 45
Gly Gly Ile Asn Pro Gly Asn Asn Tyr Ala Thr Tyr Arg Arg Lys Phe 50
55 60 Gln Gly Arg Ala Thr
Leu Thr Ala Asp Thr Ser Thr Ser Thr Val Tyr 65 70
75 80 Met Glu Leu Ser Ser Leu Arg Ser Glu Asp
Thr Ala Val Tyr Tyr Cys 85 90
95 Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala Tyr Trp
Gly 100 105 110 Gln
Gly Thr Leu Val Thr Val Ser Ser 115 120
27121PRTArtificial Sequencechemically synthesizedgH7 27Glu Val Gln Leu
Val Gln Ser Gly Ala Glu Val Lys Lys Pro Gly Ala 1 5
10 15 Ser Val Lys Val Ser Cys Lys Ala Ser
Gly Tyr Arg Phe Thr Asn Tyr 20 25
30 Trp Ile His Trp Val Arg Gln Ala Pro Gly Gln Gly Leu Glu
Trp Ile 35 40 45
Gly Gly Ile Asn Pro Gly Asn Asn Tyr Ala Thr Tyr Arg Arg Lys Phe 50
55 60 Gln Gly Arg Val Thr
Met Thr Ala Asp Thr Ser Thr Ser Thr Val Tyr 65 70
75 80 Met Glu Leu Ser Ser Leu Arg Ser Glu Asp
Thr Ala Val Tyr Tyr Cys 85 90
95 Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala Tyr Trp
Gly 100 105 110 Gln
Gly Thr Leu Val Thr Val Ser Ser 115 120
28239PRTArtificial Sequencechemically synthesizedFull sequence of grafted
light chain 28Met Lys Leu Pro Val Arg Leu Leu Val Leu Leu Leu Phe
Trp Ile Pro 1 5 10 15
Ala Ser Arg Gly Asp Val Gln Val Thr Gln Ser Pro Ser Ser Leu Ser
20 25 30 Ala Ser Val Gly
Asp Arg Val Thr Ile Thr Cys Arg Ser Ser Gln Ser 35
40 45 Leu Ala Asn Ser Tyr Gly Asn Thr Phe
Leu Ser Trp Tyr Leu His Lys 50 55
60 Pro Gly Lys Ala Pro Gln Leu Leu Ile Tyr Gly Ile Ser
Asn Arg Phe 65 70 75
80 Ser Gly Val Pro Asp Arg Phe Ser Gly Ser Gly Ser Gly Thr Asp Phe
85 90 95 Thr Leu
Thr Ile Ser Ser Leu Gln Pro Glu Asp Phe Ala Thr Tyr Tyr
100 105 110 Cys Leu Gln Gly Thr
His Gln Pro Tyr Thr Phe Gly Gln Gly Thr Lys 115
120 125 Val Glu Ile Lys Arg Thr Val Ala
Ala Pro Ser Val Phe Ile Phe Pro 130 135
140 Pro Ser Asp Glu Gln Leu Lys Ser Gly Thr Ala Ser
Val Val Cys Leu 145 150 155
160 Leu Asn Asn Phe Tyr Pro Arg Glu Ala Lys Val Gln Trp Lys Val Asp
165 170 175 Asn
Ala Leu Gln Ser Gly Asn Ser Gln Glu Ser Val Thr Glu Gln Asp
180 185 190 Ser Lys Asp Ser
Thr Tyr Ser Leu Ser Ser Thr Leu Thr Leu Ser Lys 195
200 205 Ala Asp Tyr Glu Lys His Lys
Val Tyr Ala Cys Glu Val Thr His Gln 210 215
220 Gly Leu Ser Ser Pro Val Thr Lys Ser Phe Asn
Arg Gly Glu Cys 225 230 235
29781DNAArtificial sequencechemically synthesizedFull DNA sequence of
grafted light chain 29ttcgaagccg ccaccatgaa gttgcctgtt aggctgttgg
tgcttctgtt gttctggatt 60cctgcttccc ggggtgacgt tcaagtgacc cagagcccat
ccagcctgag cgcatctgta 120ggagaccggg tcaccatcac ttgtagatcc agtcagagtc
ttgcaaacag ttatgggaac 180acctttttgt cttggtatct gcacaaacca ggtaaagccc
cacaattgct catctacgga 240atctctaaca gatttagtgg tgtaccagac aggttcagcg
gttccggaag tggtactgat 300ttcaccctca cgatctcgtc tctccagcca gaagatttcg
ccacttatta ctgtttacaa 360ggtacacatc agccgtacac attcggtcag ggtactaaag
tagaaatcaa acgtacggta 420gcggccccat ctgtcttcat cttcccgcca tctgatgagc
agttgaaatc tggaactgcc 480tctgttgtgt gcctgctgaa taacttctat cccagagagg
ccaaagtaca gtggaaggtg 540gataacgccc tccaatcggg taactcccag gagagtgtca
cagagcagga cagcaaggac 600agcacctaca gcctcagcag caccctgacg ctgagcaaag
cagactacga gaaacacaaa 660gtctacgcct gcgaagtcac ccatcagggc ctgagctcgc
ccgtcacaaa gagcttcaac 720aggggagagt gttagaggga gaagtgcccc cacctgctcc
tcagttccag cctgggaatt 780c
78130467PRTArtificial Sequencechemically
synthesizedFull sequence of grafted heavy chain 30Met Asp Phe Gly
Phe Ser Leu Val Phe Leu Ala Leu Ile Leu Lys Gly 1 5
10 15 Val Gln Cys Glu Val Gln Leu Val Gln
Ser Gly Ala Glu Val Lys Lys 20 25
30 Pro Gly Ala Ser Val Lys Val Ser Cys Lys Ala Ser Gly Tyr
Arg Phe 35 40 45
Thr Asn Tyr Trp Ile His Trp Val Arg Gln Ala Pro Gly Gln Gly Leu 50
55 60 Glu Trp Ile Gly Gly
Ile Asn Pro Gly Asn Asn Tyr Ala Thr Tyr Arg 65 70
75 80 Arg Lys Phe Gln Gly Arg Val Thr Met Thr
Ala Asp Thr Ser Thr Ser 85 90
95 Thr Val Tyr Met Glu Leu Ser Ser Leu Arg Ser Glu Asp Thr Ala
Val 100 105 110 Tyr
Tyr Cys Thr Arg Glu Gly Tyr Gly Asn Tyr Gly Ala Trp Phe Ala 115
120 125 Tyr Trp Gly Gln Gly Thr
Leu Val Thr Val Ser Ser Ala Ser Thr Lys 130 135
140 Gly Pro Ser Val Phe Pro Leu Ala Pro Cys Ser
Arg Ser Thr Ser Glu 145 150 155
160 Ser Thr Ala Ala Leu Gly Cys Leu Val Lys Asp Tyr Phe Pro Glu Pro
165 170 175 Val Thr
Val Ser Trp Asn Ser Gly Ala Leu Thr Ser Gly Val His Thr 180
185 190 Phe Pro Ala Val Leu Gln Ser
Ser Gly Leu Tyr Ser Leu Ser Ser Val 195 200
205 Val Thr Val Pro Ser Ser Ser Leu Gly Thr Lys Thr
Tyr Thr Cys Asn 210 215 220
Val Asp His Lys Pro Ser Asn Thr Lys Val Asp Lys Arg Val Glu Ser 225
230 235 240 Lys Tyr Gly
Pro Pro Cys Pro Pro Cys Pro Ala Pro Glu Phe Leu Gly 245
250 255 Gly Pro Ser Val Phe Leu Phe Pro
Pro Lys Pro Lys Asp Thr Leu Met 260 265
270 Ile Ser Arg Thr Pro Glu Val Thr Cys Val Val Val Asp
Val Ser Gln 275 280 285
Glu Asp Pro Glu Val Gln Phe Asn Trp Tyr Val Asp Gly Val Glu Val 290
295 300 His Asn Ala Lys
Thr Lys Pro Arg Glu Glu Gln Phe Asn Ser Thr Tyr 305 310
315 320 Arg Val Val Ser Val Leu Thr Val Leu
His Gln Asp Trp Leu Asn Gly 325 330
335 Lys Glu Tyr Lys Cys Lys Val Ser Asn Lys Gly Leu Pro Ser
Ser Ile 340 345 350
Glu Lys Thr Ile Ser Lys Ala Lys Gly Gln Pro Arg Glu Pro Gln Val
355 360 365 Tyr Thr Leu Pro
Pro Ser Gln Glu Glu Met Thr Lys Asn Gln Val Ser 370
375 380 Leu Thr Cys Leu Val Lys Gly Phe
Tyr Pro Ser Asp Ile Ala Val Glu 385 390
395 400 Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn Tyr Lys
Thr Thr Pro Pro 405 410
415 Val Leu Asp Ser Asp Gly Ser Phe Phe Leu Tyr Ser Arg Leu Thr Val
420 425 430 Asp Lys Ser
Arg Trp Gln Glu Gly Asn Val Phe Ser Cys Ser Val Met 435
440 445 His Glu Ala Leu His Asn His Tyr
Thr Gln Lys Ser Leu Ser Leu Ser 450 455
460 Leu Gly Lys 465 312160DNAArtificial
Sequencechemically synthesizedFull DNA sequence of grafted heavy
chain 31aagcttgccg ccaccatgga cttcggattc tctctcgtgt tcctggcact cattctcaag
60ggagtgcagt gtgaggtgca attggtccag tcaggagcag aggttaagaa gcctggtgct
120tccgtcaaag tttcgtgtaa ggctagcggc tacaggttca caaattattg gattcattgg
180gtcaggcagg ctccgggaca aggcctggaa tggatcggtg gcattaatcc cgggaataac
240tacgctacat ataggagaaa attccagggc agagttacga tgaccgcgga cacctccaca
300agcactgtct acatggagct gtcatctctg agatccgagg acaccgcagt gtactattgt
360actagagaag gctacggtaa ttacggagcc tggttcgcct actggggcca gggtacccta
420gtcacagtct cctcagcttc tacaaagggc ccatccgtct tccccctggc gccctgctcc
480aggagcacct ccgagagcac agccgccctg ggctgcctgg tcaaggacta cttccccgaa
540ccggtgacgg tgtcgtggaa ctcaggcgcc ctgaccagcg gcgtgcacac cttcccggct
600gtcctacagt cctcaggact ctactccctc agcagcgtgg tgaccgtgcc ctccagcagc
660ttgggcacga agacctacac ctgcaacgta gatcacaagc ccagcaacac caaggtggac
720aagagagttg gtgagaggcc agcacaggga gggagggtgt ctgctggaag ccaggctcag
780ccctcctgcc tggacgcacc ccggctgtgc agccccagcc cagggcagca aggcatgccc
840catctgtctc ctcacccgga ggcctctgac caccccactc atgcccaggg agagggtctt
900ctggattttt ccaccaggct ccgggcagcc acaggctgga tgcccctacc ccaggccctg
960cgcatacagg ggcaggtgct gcgctcagac ctgccaagag ccatatccgg gaggaccctg
1020cccctgacct aagcccaccc caaaggccaa actctccact ccctcagctc agacaccttc
1080tctcctccca gatctgagta actcccaatc ttctctctgc agagtccaaa tatggtcccc
1140catgcccacc atgcccaggt aagccaaccc aggcctcgcc ctccagctca aggcgggaca
1200ggtgccctag agtagcctgc atccagggac aggccccagc cgggtgctga cgcatccacc
1260tccatctctt cctcagcacc tgagttcctg gggggaccat cagtcttcct gttcccccca
1320aaacccaagg acactctcat gatctcccgg acccctgagg tcacgtgcgt ggtggtggac
1380gtgagccagg aagaccccga ggtccagttc aactggtacg tggatggcgt ggaggtgcat
1440aatgccaaga caaagccgcg ggaggagcag ttcaacagca cgtaccgtgt ggtcagcgtc
1500ctcaccgtcc tgcaccagga ctggctgaac ggcaaggagt acaagtgcaa ggtctccaac
1560aaaggcctcc cgtcctccat cgagaaaacc atctccaaag ccaaaggtgg gacccacggg
1620gtgcgagggc cacatggaca gaggtcagct cggcccaccc tctgccctgg gagtgaccgc
1680tgtgccaacc tctgtcccta cagggcagcc ccgagagcca caggtgtaca ccctgccccc
1740atcccaggag gagatgacca agaaccaggt cagcctgacc tgcctggtca aaggcttcta
1800ccccagcgac atcgccgtgg agtgggagag caatgggcag ccggagaaca actacaagac
1860cacgcctccc gtgctggact ccgacggctc cttcttcctc tacagcaggc taaccgtgga
1920caagagcagg tggcaggagg ggaatgtctt ctcatgctcc gtgatgcatg aggctctgca
1980caaccactac acacagaaga gcctctccct gtctctgggt aaatgagtgc cagggccggc
2040aagcccccgc tccccgggct ctcggggtcg cgcgaggatg cttggcacgt accccgtcta
2100catacttccc aggcacccag catggaaata aagcacccac cactgccctg gctcgaattc
21603294DNAArtificial Sequencechemically synthesized544gH1 T1
32agtgtgaggt gcaattggtc cagtcaggag cagaggttaa gaagcctggt gcttccgtca
60aagtttcgtg taaggctagc ggctacaggt tcac
943396DNAArtificial Sequencechemically synthesized544gH1 T2 33gtggcattaa
tcccgggaat cagtacacta catataaaag aaatctaaag ggcagagcaa 60cgctgaccgc
ggacacctcc acaagcactg tctaca
963495DNAArtificial Sequencechemically synthesized544gH1 T3 34agagaaggct
acggtaatta cggagcctgg ttcgcctact ggggccaggg taccctagtc 60acagtctcct
cagcttctac aaagggccca agaaa
953594DNAArtificial Sequencechemically synthesized544 gH1 B1 35ggaccaattg
cacctcacac tgcactccct tgagaatgag tgccaggaac acgagagaga 60atccgaagtc
catggtggcg gcaagctttt attc
943697DNAArtificial Sequencechemically synthesized544gH1 B2 36gattcccggg
attaatgcca ccgatccatt ccaggccttg tcccggagcc tgcctgaccc 60aatgaatcca
ataatttgtg aacctgtagc cgctagc
973793DNAArtificial Sequencechemically synthesized544gH1 B3 37cgtaattacc
gtagccttct ctagtacaat agtacactgc ggtgtcctcg gatctcagag 60atgacagctc
catgtagaca gtgcttgtgg agg
933821DNAArtificial Sequencechemically synthesized544gH1 F1 38gaataaaagc
ttgccgccac c
213922DNAArtificial Sequencechemically synthesized544gH1 R1 39tttcttgggc
cctttgtaga ag
224087DNAArtificial Sequencechemically synthesized544 gL1 T1 40gcttcccggg
gtgacgttca agtgacccag agcccatcca gcctgagcgc atctgtagga 60gaccgggtca
ccatcacttg tagatcc
874190DNAArtificial Sequencechemically synthesized544 gL1 T2 41tatctgcaca
aaccaggtaa agccccacaa ttgctcatct acggaatctc taacagattt 60agtggtgtac
cagacaggtt cagcggttcc
904291DNAArtificial Sequencechemically synthesized544gL1 T3 42agatttcgcc
acttattact gtttacaagg tacacatcag ccgtacacat tcggtcaggg 60tactaaagta
gaaatcaaac gtacggcgtg c
914388DNAArtificial Sequencechemically synthesized544gL1 B1 43gaacgtcacc
ccgggaagca ggaatccaga acaacagaag caccaacagc ctaacaggca 60acttcatggt
ggcggcttcg aatcatcc
884488DNAArtificial Sequencechemically synthesized544gL1 B2 44ctttacctgg
tttgtgcaga taccaagaca aaaaggtgtt cccataactg tttgcaagac 60tctgactgga
tctacaagtg atggtgac
884590DNAArtificial Sequencechemically synthesized544gL1 B3 45aacagtaata
agtggcgaaa tcttctggct ggagagacga gatcgtgagg gtgaaatcag 60taccacttcc
ggaaccgctg aacctgtctg
904620DNAArtificial Sequencechemically synthesized544gL1 F1 46ggatgattcg
aagccgccac
204721DNAArtificial Sequencechemically synthesized544gL1 R1 47gcacgccgta
cgtttgattt c 2148339DNAmus
musculusDNA sequence of mouse monoclonal 5/44 VL 48gatgttgtgg tgactcaaac
tccactctcc ctgcctgtca gctttggaga tcaagtttct 60atctcttgca ggtctagtca
gagtcttgca aacagttatg ggaacacctt tttgtcttgg 120tacctgcaca agcctggcca
gtctccacag ctcctcatct atgggatttc caacagattt 180tctggggtgc cagacaggtt
cactggcagt ggttcaggga cagatttcac actcaagatc 240agcacaataa agcctgagga
cttgggaatg tattactgct tacaaggtac acatcagccg 300tacacgttcg gaggggggac
caagctggaa ataaaacgt 33949363DNAmus musculusDNA
sequence of mouse monoclonal 5/44 VH 49gaggtccaac tgcagcagtc tgggactgta
ctggcaaggc ctggggcttc cgtgaagatg 60tcctgcaagg cttctggcta caggtttacc
aactactgga ttcactgggt aaaacagagg 120cctgggcagg gtctagaatg gattggtggt
attaatcctg gaaataatta tactacgtat 180aagaggaact tgaagggcaa ggccacactg
actgcagtca catccgccag cactgcctac 240atggacctca gcagcctgac aagtgaggac
tctgcggtct attactgtac aagagagggc 300tatggtaact acggggcctg gtttgcttac
tggggccagg ggactctggt caccgtctcc 360tca
363509DNAArtificial Sequencechemically
synthesizedsequence within oligonucleotide primer 50gccgccacc
951101DNAArtificial
Sequencechemically synthesized5' oligonucleotide primer 51gcgcgcaagc
ttgccgccac catggacttc ggattctctc tcgtgttcct ggcactcatt 60ctcaagggag
tgcagtgtga ggtgcagctc gtcgagtctg g
1015258DNAArtificial Sequencechemically synthesizedgH4 forward
oligonucleotide cassette 52ccgggaataa ctacgctaca tataggagaa atctaaaggg
cagagcaacg ctgaccgc 585352DNAArtificial Sequencechemically
synthesizedgH4 reverse oligonucleotide cassette 53cttattgatg
cgatgtatat cctctttaga tttcccgtct cgttgcgact gg
525458DNAArtificial Sequencechemically synthesizedgH5 forward
oligonucleotide cassette 54ccgggaataa ctacgctaca tataggagaa atctaaaggg
cagagttacg atgaccgc 585552DNAArtificial Sequencechemically
synthesizedgH5 reverse oligonucleotide cassette 55cttattgatg
cgatgtatat cctctttaga tttcccgtct caatgctact gg
525658DNAArtificial Sequencechemically synthesizedgH6 forward
oligonucleotide cassette 56ccgggaataa ctacgctaca tataggagaa aattccaggg
cagagcaacg ctgaccgc 585752DNAArtificial Sequencechemically
synthesizedgH6 reverse oligonucleotide cassette 57cttattgatg
cgatgtatat cctcttttaa ggtcccgtct cgttgcgact gg
525858DNAArtificial Sequencechemically synthesizedgH7 forward
oligonucleotide cassette 58ccgggaataa ctacgctaca tataggagaa aattccaggg
cagagttacg atgaccgc 585952DNAArtificial Sequencechemically
synthesizedgH7 reverse oligonucleotide cassette 59cttattgatg
cgatgtatat cctcttttaa ggtcccgtct caatgctact gg
526061DNAArtificial Sequencechemically synthesizedgL2 forward
oligonucleotide cassette 60ccggggtgac gttgtcgtga cccagagccc atccagcctg
agcgcatctg taggagaccg 60g
616162DNAArtificial Sequencechemically
synthesizedgL2 reverse oligonucleotide cassette 61ccactgcaac
agcactgggt ctcgggtagg tcggactcgc gtagacatcc tctggcccag 60ta
626220PRTArtificial Sequencechemically synthesizedgH4 cassette 62Pro Gly
Asn Asn Tyr Ala Thr Tyr Arg Arg Asn Leu Lys Gly Arg Ala 1 5
10 15 Thr Leu Thr Ala
20 6320PRTArtificial Sequencechemically synthesizedgH5 63Pro Gly Asn Asn
Tyr Ala Thr Tyr Arg Arg Lys Phe Gln Gly Arg Val 1 5
10 15 Thr Met Thr Ala 20
6420PRTArtificial Sequencechemically synthesizedgH6 64Pro Gly Asn Asn Tyr
Ala Thr Tyr Arg Arg Lys Phe Gln Gly Arg Ala 1 5
10 15 Thr Leu Thr Ala 20
6520PRTArtificial Sequencechemically synthesizedgH7 65Pro Gly Asn Asn Tyr
Ala Thr Tyr Arg Arg Lys Phe Gln Gly Arg Val 1 5
10 15 Thr Met Thr Ala 20
6623PRTArtificial Sequencechemically synthesizedgL2 66Ser Arg Gly Asp Val
Val Val Thr Gln Ser Pro Ser Ser Leu Ser Ala 1 5
10 15 Ser Val Gly Asp Arg Val Thr
2067339DNAmus musculusantisense strand5/44 VL 67ctacaacacc actgagtttg
aggtgagagg gacggacagt cgaaacctct agttcaaaga 60tagagaacgt ccagatcagt
ctcagaacgt ttgtcaatac ccttgtggaa aaacagaacc 120atggacgtgt tcggaccggt
cagaggtgtc gaggagtaga taccctaaag gttgtctaaa 180agaccccacg gtctgtccaa
gtgaccgtca ccaagtccct gtctaaagtg tgagttctag 240tcgtgttatt tcggactcct
gaacccttac ataatgacga atgttccatg tgtagtcggc 300atgtgcaagc ctcccccctg
gttcgacctt tattttgca 33968363DNAmus
musculusantisense strand5/44 VH 68ctccaggttg acgtcgtcag accctgacat
gaccgttccg gaccccgaag gcacttctac 60aggacgttcc gaagaccgat gtccaaatgg
ttgatgacct aagtgaccca ttttgtctcc 120ggacccgtcc cagatcttac ctaaccacca
taattaggac ctttattaat atgatgcata 180ttctccttga acttcccgtt ccggtgtgac
tgacgtcagt gtaggccgtc gtgacggatg 240tacctggagt cgtcggactg ttcactcctg
agacgccaga taatgacatg ttctctcccg 300ataccattga tgccccggac caaacgaatg
accccggtcc cctgagacca gtggcagagg 360agy
3636915PRThomo sapiens 69Trp Tyr Gln Gln
Lys Pro Gly Lys Ala Pro Lys Leu Leu Ile Tyr 1 5
10 157032PRThomo sapiens 70Gly Val Pro Ser Arg Phe
Ser Gly Ser Gly Ser Gly Thr Asp Phe Thr 1 5
10 15Leu Thr Ile Ser Ser Leu Gln Pro Glu Asp Phe Ala
Thr Tyr Tyr Cys 20 25
307114PRThomo sapiens 71Trp Val Arg Gln Ala Pro Gly Gln Gly Leu Glu Trp
Met Gly 1 5 107236PRThomo sapiens 72Lys
Phe Gln Gly Arg Val Thr Met Thr Arg Asp Thr Ser Thr Ser Thr 1
5 10 15Val Tyr Met Glu Leu Ser Ser
Leu Arg Ser Glu Asp Thr Ala Val Tyr 20 25
30Tyr Cys Ala Arg 35732155DNAArtificial
sequencechemically synthesizedFull DNA sequence of grafted heavy
chain 73ttcgaacggc ggtggtacct gaagcctaag agagagcaca aggaccgtga gtaagagttc
60cctcacgtca cactccacgt taaccaggtc agtcctcgtc tccaattctt cggaccacga
120aggcagtttc aaagcacatt ccgatcgccg atgtccaagt gtttaataac ctaagtaacc
180cagtccgtcc gaggccctgt tccggacctt acctagccac cgtaattagg gcccttattg
240atgcgatgta tatcctcttt taaggtcccg tctcaatgct actggcgcct gtggaggtgt
300tcgtgacaga tgtacctcga cagtagagac tctaggctcc tgtggcgtca catgataaca
360tgatctcttc cgatcggatt aatgcctcgg accaagcgga tgaccccggt cccatgggat
420cagtgtcaga ggagtcgaag atgtttcccg ggtaggcaga agggggaccg cgggacgagg
480tcctcgtgga ggctctcgtg tcggcgggac ccgacggacc agttcctgat gaaggggctt
540ggccactgcc acagcacctt gagtccgcgg gactggtcgc cgcacgtgtg gaagggccga
600caggatgtca ggagtcctga gatgagggag tcgtcgcacc actggcacgg gaggtcgtcg
660aacccgtgct tctggatgtg gacgttgcat ctagtgttcg ggtcgttgtg gttccacctg
720ttctctcaac cactctccgg tcgtgtccct ccctcccaca gacgaccttc ggtccgagtc
780gggaggacgg acctgcgtgg ggccgacacg tcggggtcgg gtcccgtcgt tccgtacggg
840gtagacagag gagtgggcct ccggagactg gtggggtgag tacgggtccc tctcccagaa
900gacctaaaaa ggtggtccga ggcccgtcgg tgtccgacct acggggatgg ggtccgggac
960gcgtatgtcc ccgtccacga cgcgagtctg gacggttctc ggtataggcc ctcctgggac
1020ggggactgga ttcgggtggg gtttccggtt tgagaggtga gggagtcgag tctgtggaag
1080agaggagggt ctagactcat tgagggttag aagagagacg tctcaggttt ataccagggg
1140gtacgggtgg tacgggtcca ttcggttggg tccggagcgg gaggtcgagt tccgccctgt
1200ccacgggatc tcatcggacg taggtccctg tccggggtcg gcccacgact gcgtaggtgg
1260aggtagagaa ggagtcgtgg actcaaggac ccccctggta gtcagaagga caaggggggt
1320tttgggttcc tgtgagagta ctagagggcc tggggactcc agtgcacgca ccaccacctg
1380cactcggtcc ttctggggct ccaggtcaag ttgaccatgc acctaccgca cctccacgta
1440tacggttctg tttcggcgcc ctcctcgtca agttgtcgtg catggcacac cagtcgcagg
1500agtggcagga cgtgctgacc gacttgccgt tcctcatgtt cacgttccag aggttgtttc
1560cggagggcag gaggtagctc ttttggtaga ggtttcggtt tccaccctgg gtgccccacg
1620ctcccggtgt acctgtctcc agtcgagccg ggtgggagac gggaccctca ctggcgacac
1680ggttggagac agggatgtcc cgtcggggct ctcggtgtcc acatgtggga cgggggtagg
1740gtcctcctct actggttctt ggtccagtcg gactggacgg accagtttcc gaagatgggg
1800tcgctgtagc ggcacctcac cctctcgttc ccgtcggcct cttgttgatg ttctggtgcg
1860gagggcacga cctgaggctg ccgaggaaga aggagatgtc gtccgattgg cacctgttct
1920cgtccaccgt cctcccctta cagaagagta cgaggcacta cgtactccga gacgtgttgg
1980tgatgtgtgt cttctcggag agggacagag acccatttac tcacggtccc ggccgttcgg
2040gggcgagggg cccgagagcc ccagcgcgct cctacgaacc gtgcatgggg cagatgtatg
2100aagggtccgt gggtcgtacc tttatttcgt gggtggtgac gggaccgagc ttaag
215574780DNAArtificial sequencechemically synthesizedFull DNA sequence of
grafted light chain 74aagcttcggc ggtggtactt caacggacaa tccgacaacc
acgaagacaa caagacctaa 60ggacgaaggg ccccactgca agttcactgg gtctcgggta
ggtcggactc gcgtagacat 120cctctggccc agtggtagtg aacatctagg tcagtctcag
aacgtttgtc aatacccttg 180tggaaaaaca gaaccataga cgtgtttggt ccatttcggg
gtgttaacga gtagatgcct 240tagagattgt ctaaatcacc acatggtctg tccaagtcgc
caaggccttc accatgacta 300aagtgggagt gctagagcag agaggtcggt cttctaaagc
ggtgaataat gacaaatgtt 360ccatgtgtag tcggcatgtg taagccagtc ccatgatttc
atctttagtt tgcatgccat 420cgccggggta gacagaagta gaagggcggt agactactcg
tcaactttag accttgacgg 480agacaacaca cggacgactt attgaagata gggtctctcc
ggtttcatgt caccttccac 540ctattgcggg aggttagccc attgagggtc ctctcacagt
gtctcgtcct gtcgttcctg 600tcgtggatgt cggagtcgtc gtgggactgc gactcgtttc
gtctgatgct ctttgtgttt 660cagatgcgga cgcttcagtg ggtagtcccg gactcgagcg
ggcagtgttt ctcgaagttg 720tcccctctca caatctccct cttcacgggg gtggacgagg
agtcaaggtc ggacccttaa 780
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