Patent application title: MALARIA VACCINE
Inventors:
IPC8 Class: AA61K39015FI
USPC Class:
1 1
Class name:
Publication date: 2017-02-09
Patent application number: 20170035871
Abstract:
The present invention provides a particle comprising a polypeptide and at
least one malaria antigen, and a composition or vaccine comprising
thereof, its use in medicine, particularly in the prevention or treatment
of malaria infections.Claims:
1-44. (canceled)
45. A virus-like particle comprising a virus structural polypeptide and at least one malaria antigen, wherein said virus structural polypeptide is a polypeptide derived from alphavirus or flavivirus.
46. The virus-like particle according to claim 45, wherein said virus structural polypeptide is a polypeptide derived from alphavirus.
47. The virus-like particle according to claim 45, wherein said virus structural polypeptide comprises the capsid and/or the envelope proteins E1 and E2.
48. The virus-like particle according to claim 47, wherein said at least one malaria antigen is inserted into E2 of the envelope protein.
49. The virus-like particle according to claim 45, wherein said virus structural polypeptide is a polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV).
50. The virus-like particle according to claim 45, wherein said at least one malaria antigen is a fragment derived from the circumsporozoite protein.
51. The virus-like particle according to claim 45, wherein said at least one malaria antigen is an antigen comprising (NPNA).sub.n wherein n is from 4 to 30 and/or an antigen comprising (EYLNKIQSLSTEWSPCSVT).sub.y wherein y is from 1 to 6.
52. The virus-like particle according to claim 49, wherein said at least one malaria antigen is inserted between 509-510, 510-511, 511-512, 519-520, 529-530, 530-531 or 531-532 of SEQ ID NO: 1 or 2, or between residues 515-516, 516-517, 517-518, 518-519, 519-520, 536-537, 537-538 or 538-539 of SEQ ID NO: 3.
53. The virus-like particle according to claim 49, wherein the particle is Chikungunya virus-like particle consisting of one or more envelope protein E2 into which the antigen is inserted, one or more envelope protein E1 and one or more capsid, and wherein the envelope protein E2 into which the antigen is inserted consists of an amino acid sequence represented by SEQ ID NO: 50; the envelope protein E1 consists of an amino acid sequence represented by SEQ ID NO: 51; and the capsid consists of an amino acid sequence represented by SEQ ID NO: 52.
54. The virus-like particle according to claim 49, wherein the particle is Venezuelan equine encephalitis virus-like particle consisting of one or more envelope protein E2 into which the antigen is inserted, one or more envelope protein E1 and one or more capsid, and wherein the envelope protein E2 into which the antigen is inserted consists of an amino acid sequence represented by SEQ ID NO: 53; the envelope protein E1 consists of an amino acid sequence represented by SEQ ID NO: 54; and the capsid consists of an amino acid sequence represented by SEQ ID NO: 55.
55. An isolated nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45.
56. A vector comprising the nucleic acid molecule according to claim 55, wherein the vector optionally comprises an expression control sequence operably linked to the nucleic acid molecule.
57. A pharmaceutical composition comprising: (a) the virus-like particle according to claim 45 and/or a nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45; and (b) a pharmaceutically acceptable carrier.
58. A vaccine composition comprising the virus-like particle according to claim 45.
59. A method of treating malaria in a mammal, comprising administering an effective amount of the virus-like particle according to claim 45 and/or a nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45 to the mammal in need thereof.
60. A method of treating malaria in a mammal, comprising administering a priming composition comprising at least one first malaria antigen or at least one polynucleotide encoding at least one first malaria antigen; and a boosting composition comprising at least one polypeptide comprising at least one second malaria antigen or at least one polynucleotide encoding at least one second malaria antigen, wherein at least one of said compositions comprises the virus-like particle according to claim 45 and/or a nucleic acid molecule comprising a nucleotide sequence for expressing the particle according to claim 45 to the mammal in need thereof.
61. The method according to claim 60, wherein the polynucleotide encodes substantially all of the circumsporozoite protein.
62. The vaccine composition according to claim 58 for use in the prevention or treatment of malaria, comprising a plurality of malaria-derived antigens.
63. A kit comprising (a) a vaccine composition comprising the virus-like particle according to claim 45; and (b) another vaccine composition comprising the virus-like particle according to claim 45, wherein the particle contained in (a) is a virus-like particle which is different from the particle contained in (b).
64. The kit according to claim 63, further comprising (c) a third vaccine composition comprising a virus-like comprising a virus structural polypeptide and at least one malaria antigen, wherein said virus structural polypeptide is a polypeptide derived from alphavirus or flavivirus, wherein said first vaccine composition is used for priming immunization and said second and third vaccine compositions are used for boosting immunization, and wherein the virus-like particle contained in said third vaccine composition is different from the virus-like particle contained in said first and second vaccine compositions, or is the same as a virus-like particle contained in either said first or second vaccine composition.
Description:
CROSS-REFERENCE TO RELATED APPLICATIONS
[0001] This is a continuation of U.S. application Ser. No. 14/294,968 filed Jun. 3, 2014, which claims benefit from U.S. Provisional Application No. 61/830,436, filed Jun. 3, 2013, and U.S. Provisional Application No. 61/906,583, filed Nov. 20, 2013. The entire disclosures of the prior applications are considered part of the disclosure of the accompanying continuation, and are hereby incorporated by reference.
TECHNICAL FIELD
[0002] The present invention relates to a particle comprising a polypeptide and at least one malaria antigen, and a composition or vaccine comprising thereof, its use in medicine, particularly in the prevention or treatment of malaria.
BACKGROUND
[0003] Malaria is one of the world's most prevalent serious infectious diseases, with approximately 250 million cases and 1 million deaths per year (WHO, 2009). Mortality is primarily in children under the age of five and in pregnant women. Every 45 seconds, an African child dies of malaria. The disease is transmitted from person to person by infected mosquitoes, so past eradication efforts involved massive insecticide campaigns. These were successful in the Southeast U.S. for example, but failed in most poorly developed tropical countries. Current efforts involve distribution of bednets, particularly bednets impregnated with insecticide, to prevent mosquito bites at night. However, resistance to insecticides and to anti-malarial drugs for both prevention and treatment is rapidly rising. Thus, the need for a malaria vaccine is imperative for protection of millions of people from disease (http://www.globalvaccines.org/content/malaria+vaccine+prog ram/19614).
[0004] Malaria caused by Plasmodium falciparum remains a major public health threat, especially among children and pregnant women in Africa. An effective malaria vaccine would be a valuable tool to reduce the disease burden and could contribute to elimination of malaria in some regions of the world. Current malaria vaccine candidates are directed against human and mosquito stages of the parasite life cycle, but thus far, relatively few proteins have been studied for potential vaccine development.
[0005] The most advanced vaccine candidate, RTS,S, conferred partial protection against malaria in phase II clinical trials and is currently being evaluated in a phase III trial in Africa. (The Journal of Clinical Investigation 120(12) 4168-4178, 2010).
[0006] The CSP is the predominant surface antigen on sporozoites. CSP is composed of an N-terminal region that binds heparin sulfate proteoglycans (RI), a central region containing a four-amino-acid (NPNA) repeat, and a GPI-anchored C-terminal region containing a thrombospondin-like domain (RII). The region of the CSP included in the RTS,S vaccine includes the last 16 NPNA repeats and the entire flanking C-terminus. HBsAg particles serve as the matrix carrier for RTS,S, 25% of which is fused to the CSP segment (The Journal of Clinical Investigation 120(12) 4168-4178, 2010).
[0007] In a series of phase II clinical trials for RTS,S, 30%-50% of malaria-naive adults immunized with RTS,S were protected against challenge by mosquitoes infected with the homologous P. falciparum clone. In phase II field trials in the Gambia and Kenya, RTS,S conferred short-lived protection against malaria infection in approximately 35% of adults, although results from the Kenya trial did not reach statistical significance. Approximately 30%-50% of children and infants immunized with RTS,S in phase II trials conducted in Mozambique, Tanzania, and Kenya were protected from clinical malaria, however, protection was generally short-lived (The Journal of Clinical Investigation 120(12) 4168-4178, 2010). Results from a pivotal, large-scale Phase III trial, published Nov. 9, 2012, online in the New England Journal of Medicine (NEJM), show that the RTS,S malaria vaccine candidate can help protect African infants against malaria. When compared to immunization with a control vaccine, infants (aged 6-12 weeks at first vaccination) vaccinated with RTS,S had one-third fewer episodes of both clinical and severe malaria and had similar reactions to the injection.
[0008] There are currently no licensed vaccines against malaria. Highly effective malaria vaccine is strongly desired.
[0009] Virus-like particles (VLPs) are multiprotein structures that mimic the organization and conformation of authentic native viruses but lack the viral genome, potentially yielding safer and cheaper vaccine candidates. A handful of prophylactic VLP-based vaccines is currently commercialized worldwide: GlaxoSmithKline's Engerix.RTM. (hepatitis B virus) and Cervarix.RTM. (human papillomavirus), and Merck and Co., Inc.'s Recombivax HB.RTM. (hepatitis B virus) and Gardasil.RTM. (human papillomavirus) are some examples. Other VLP-based vaccine candidates are in clinical trials or undergoing preclinical evaluation, such as, influenza virus, parvovirus, Norwalk and various chimeric VLPs. Many others are still restricted to small-scale fundamental research, despite their success in preclinical tests. The implications of large-scale VLP production are discussed in the context of process control, monitorization and optimization. The main up- and down-stream technical challenges are identified and discussed accordingly. Successful VLP-based vaccine blockbusters are briefly presented concomitantly with the latest results from clinical trials and the recent developments in chimeric VLP-based technology for either therapeutic or prophylactic vaccination (Expert Rev. Vaccines 9(10), 1149-1176, 2010).
[0010] Chikungunya virus (CHIKV) has infected millions of people in Africa, Europe and Asia since this alphavirus reemerged from Kenya in 2004. The severity of the disease and the spread of this epidemic virus present a serious public health threat in the absence of vaccines or antiviral therapies. It is reported that a VLP vaccine for epidemic Chikungunya virus protects non-human primates against infection (Nat Med. 2010 March; 16(3): 334-338). US patent publication No. 2012/0003266 discloses a virus-like particle (VLP) comprising one or more Chikungunya virus structural polypeptides which is useful for formulating a vaccine or antigenic composition for Chikungunya that induces immunity to an infection or at least one symptom thereof. WO2012/106356 discloses modified alphavirus or flavivirus virus-like particles (VLPs) and methods for enhancing production of modified VLPs for use in the prevention or treatment of alphavirus and flavivirus-mediated diseases. (these cited references are herein incorporated by reference).
SUMMARY OF THE INVENTION
[0011] In the first aspect, the present invention provides a particle which is capable of being self-assembled, comprising a polypeptide and at least one malaria antigen, wherein said polypeptide comprises at least one first attachment site and said at least one malaria antigen comprises at least one second attachment site, and wherein said polypeptide and said malaria antigen are linked through said at least one first and said at least one second attachment site.
[0012] In the second aspect, the present invention provides a nucleic acid molecule which is designed for expression of a particle provided in the first aspect of the present invention.
[0013] In the third aspect, the present invention provides a composition or vaccine comprising the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention.
[0014] In the fourth aspect, the present invention provides a method of producing an antibody, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0015] In the fifth aspect, the present invention provides a method of immunomodulation, a method of treating malaria, a method of inducing and/or enhancing immune response against a malaria antigen in a mammal, comprising administering the composition provided in the third aspect of the present invention to a mammal.
[0016] In sixth aspect, the present invention provides a method of passive immunization against a malaria-causing pathogen, comprising administering the antibody provided in the fourth aspect of the present invention to a mammal.
[0017] In seventh aspect, the present invention provides a method of presenting an antigen on macrophage, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0018] In eighth aspect, the present invention provides a method for producing the particle provided in the first aspect of the present invention, comprising preparing a vector which is designed for expression of said particle; culturing a cell which is transfected with said vector to express said particle; and recovering said particle.
BRIEF DESCRIPTION OF THE INVENTION
[0019] FIG. 1 shows pVLP74_15 (VLP_CHI 532 NPNA.times.6) vector.
[0020] FIG. 2 shows pVLP78_15 (VLP_CHI 532 NPNA.times.25) vector.
[0021] FIG. 3 shows pVLP74_25 (VLP_VEEV 519 NPNA.times.6) vector.
[0022] FIG. 4 shows that the serum from individual monkeys immunized with Malaria VLPs after 2 weeks induced high titer of antibodies against CSP.
[0023] FIG. 5 shows mean value and SD of the data shown in FIG. 4.
[0024] FIG. 6 shows effects of combined immunization of CHIKV VLP and VEEV VLP on induction of antibodies against CSP. In the figure, Adj indicates adjuvant.
[0025] FIG. 7 shows effects of administered VLP fused with no malaria antigen on induction of antibodies against CSP. In the figure, 4w, 6w, 10w and 14w indicate 4 weeks after immunization, 6 weeks after immunization, 10 weeks after immunization and 14 weeks after immunization, respectively.
[0026] FIG. 8 shows effects of administered VLP fused with malaria antigen on induction of antibodies against CSP. In the figure, 4w, 6w, 10w and 14w indicate 4 weeks after immunization, 6 weeks after immunization, 10 weeks after immunization and 14 weeks after immunization, respectively.
[0027] FIG. 9 shows effects of administered VLP fused with malaria antigen together with adjuvant on induction of antibodies against CSP. In the figure, 4w, 6w, 10w and 14w indicate 4 weeks after immunization, 6 weeks after immunization, 10 weeks after immunization and 14 weeks after immunization, respectively.
[0028] FIG. 10 shows schedule of the experiment.
[0029] FIG. 11 shows detection of 18S malaria DNA by means of PCR.
DETAILED DESCRIPTION OF THE INVENTION
(1) A Particle Comprising a Polypeptide and at Least One Malaria Antigen
[0030] In the first aspect, the present invention provides a particle which is capable of being self-assembled, comprising a polypeptide and at least one malaria antigen, wherein said polypeptide comprises at least one first attachment site and said at least one antigen comprises at least one second attachment site, and wherein said polypeptide and said malaria antigen are linked through said at least one first and said at least one second attachment site.
[0031] As used herein, "a particle which is capable of being self-assembled" refers to a particle formed by at least one constituent which is spontaneously assembled. The constituent may be a polypeptide or non-peptide chemical compound. In one embodiment, "a particle which is capable of being self-assembled" may be a particle comprising or consisting of at least one polypeptide. The at least one polypeptide consists of one or more kinds of peptide. In one embodiment, said particle has a diameter of at least 10 nm, for example, at least 20 nm, preferably at least 50 nm. In one embodiment, molecular weight of said particle is from 100 kDa to 100,000 kDa, preferably from 400 kDa to 30,000 kDa.
[0032] A polypeptide used for the present invention may be spontaneously assembled. The polypeptide may be a virus structural polypeptide. Thus, the particle provided by the present invention may be a virus like particle.
[0033] A virus structural polypeptide may be a naturally occurring viral polypeptide or modified polypeptide thereof. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring viral structural polypeptide including capsid and envelope protein. In one embodiment, the modified polypeptide is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added to a naturally occurring viral structural polypeptide including capsid and envelope protein.
[0034] In one embodiment, virus structural polypeptide used for the present invention consists of or comprises capsid and/or envelope protein or fragment thereof. For example, virus structural polypeptide used for the present invention consists of or comprises capsid and E2 and E1. An antigen may be inserted into E2. In one embodiment, a particle provided by the first aspect of the present invention can be formed by assembling 240 capsids, 240 E1 proteins and 240 E2 proteins where a malaria antigen is inserted into each of E2 proteins.
[0035] Virus structural polypeptide used for the present invention may be derived from Alphavirus or Flavivirus. Thus, the particle provided by the present invention may be a virus like particle derived from Alphavirus or Flavivirus. Examples of Alphavirus and Flavivirus include, but not limited to, Aura virus, Babanki virus, Barmah Forest virus (BFV), Bebaru virus, Cabassou virus, Chikungunya virus (CHIKV), Eastern equine encephalitis virus (EEEV), Eilat virus, Everglades virus, Fort Morgan virus, Getah virus, Highlands J virus, Kyzylagach virus, Mayaro virus, Me Tri virus, Middelburg virus, Mosso das Pedras virus, Mucambo virus, Ndumu virus, O'nyong-nyong virus, Pixuna virus, Rio Negro virus, Ross River virus (RRV), Salmon pancreas disease virus, Semliki Forest virus, Sindbis virus, Southern elephant seal virus, Tonate virus, Trocara virus, Una virus, Venezuelan equine encephalitis virus (VEEV), Western equine encephalitis virus (WEEV), Whataroa virus, West Nile virus, dengue virus, tick-borne encephalitis virus and yellow fever virus.
[0036] Malaria is a disease which human or other animal (e.g. mouse) suffers from. Example of malaria include, but are not limited to, a disease caused by Plasmodium (P.) species including P. falciparum, P. malariae, P.ovale, P.vivax, P.knowlesi, P.berghei, P.chabaudi and P.yoelii
[0037] As used herein, the term "malaria antigen" refers to any antigen or fragment thereof. The term antigen or fragment thereof, means any peptide-based sequence that can be recognized by the immune system and/or that stimulates a cell-mediated immune response and/or stimulates the generation of antibodies.
[0038] According to Scand. J. Immunol. 56, 327-343, 2002, considering the whole parasite life cycle, there are essentially six targets for a malaria vaccine: (1) sporozoites; (2) liver stages; (3) merozoites; (4) infected RBC; (5) parasite toxins; (6) sexual stages.
[0039] Table summarizes the main candidate antigens of each stage identified.
TABLE-US-00001 TABLE 1 Main vaccine candidates from the different phases of Plasmodium life cycle Targets Candidate antigens Sporozoite Circumsporozoite protein (CSP) Thrombospondin-related adhesive protein (TRAP) Sporozoite and liver-stage antigen (SALSA) Sporozoite threonine- and asparagine-rich protein (STARP) Liver stage CSP Liver-stage antigen (LSA)-1 and -3 SALSA STARP Merozoite Merozoite surface protein (MSP)-1, -2, -3, -4 and -5 Erythrocyte-binding antigen (EBA)-175 Apical membrane antigen (AMA)-1 Rhoptry-associated protein (RAP)-1 and -2 Acidic-basic repeat antigen (ABRA) Duffy-binding protein (DBP) (Plasmodium vivax) Blood stage Ring erythrocyte surface antigen (RESA) Serine-rich protein (SERP) Erythrocyte membrane protein (EMP)-1, -2 and -3 Glutamate-rich protein (GLURP) Toxins Glycosilphosphatidylinositol (GPI) Sexual Ps25, Ps28, Ps48/45 and Ps230 stages (Scand. J. Immunol. 56, 327-343, 2002)
[0040] According to the present invention, one or more antigens listed above can be used as long as it is formed to a particle. For example, a circumsporozoite protein and a fragment thereof can be used as an antigen. Examples of circumsporozoite protein include, but are not limited to, Plasmodium falciparum circumsporozoite protein consisting of amino acid sequence described below (SEQ ID No. 56):
TABLE-US-00002 Mmrklailsyssflfvealfqeyqcygsssntrvinelnydnagtn lynelemnyygkqenwyslkknsrslgenddgnnnngdngregkde dkrdgnnedneklrkpkhkklkqpgdgnpdpnanpnvdpnanpnvd pnanpnvdpnanpnanpnanpnanpnanpnanpnanpnanpnanpn anpnanpnanpnanpnanpnanpnvdpnanpnanpnanpnanpnan pnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpn anpnanpnanpnknnqgngqghnmpndpnrnvdenanannavknnn neepsdkhiegylkkiknsistewspcsvtcgngiqvrikpgsank pkdeldyendiekkickmekcssvfnvvnssiglimvlsflflntr.
[0041] In one embodiment, malaria antigen is a Plasmodium falciparum circumsporozoite protein B cell epitope. Example of Plasmodium falciparum circumsporozoite protein B cell epitope may be a repeat sequence of NPNA, including (NPNA).sub.4-30 (i.e. 4.times.NPNA, 5.times.NPNA, 6.times.NPNA, 7.times.NPNA, 8.times.NPNA, 9.times.NPNA, 10.times.NPNA, 11.times.NPNA, 12.times.NPNA, 13.times.NPNA 14.times.NPNA, 15.times.NPNA, 16.times.NPNA, 17.times.NPNA, 18.times.NPNA, 19.times.NPNA, 20.times.NPNA, 21.times.NPNA, 22.times.NPNA, 23.times.NPNA, 24.times.NPNA, 25.times.NPNA, 26.times.NPNA, 27.times.NPNA, 28.times.NPNA, 29.times.NPNA or 30.times.NPNA).
[0042] In one embodiment, malaria antigen is a Plasmodium yoelii circumsporozoite protein B cell epitope including (QGPGAP).sub.3-12.
[0043] In one embodiment, malaria antigen is a Plasmodium vivax circumsporozoite protein B cell epitope including (ANGAGNQPG).sub.1-12.
[0044] In one embodiment, malaria antigen is a Plasmodium malariae circumsporozoite protein B cell epitope including (NAAG).sub.4-30.
[0045] In one embodiment, malaria antigen is a Plasmodium falciparum circumsporozoite protein T cell epitope. Example of Plasmodium falciparum circumsporozoite protein T cell epitope may be EYLNKIQNSLSTEWSPCSVT (SEQ ID No. 44) (EYLNKIQNSLSTEWSPCSVT).sub.1-6 may be also used as a malaria antigen.
[0046] In one embodiment, malaria antigen is a Plasmodium yoelii circumsporozoite protein T cell epitope which is YNRNIVNRLLGDALNGPEEK (SEQ ID No.45). (YNRNIVNRLLGDALNGPEEK).sub.1-6 may be also used as a malaria antigen.
[0047] The present invention addresses one or more of the above needs by providing antigens, vectors encoding the antigens, and antibodies (and antibody-like molecules including aptamers and peptides) that specifically bind to the antigen, together with the uses thereof (either alone or in combination) in the prevention or treatment of malaria infections. As used herein, the term "antibody" refers to molecules which are capable of binding an epitope or antigenic determinant. The term is meant to include whole antibodies and antigen-binding fragments thereof, including single-chain antibodies. Such antibodies include human antigen binding antibody fragments and include, but are not limited to, Fab, Fab' and F(ab')2, Fd, single-chain Fvs (scFv), single-chain antibodies, disulfide-linked Fvs (sdFv) and fragments comprising either a VL or VH domain. The antibodies can be from any animal origin including birds and mammals. Preferably, the antibodies are mammalian e.g. human, murine, rabbit, goat, guinea pig, camel, horse and the like, or other suitable animals e.g. chicken. As used herein, "human" antibodies include antibodies having the amino acid sequence of a human immunoglobulin and include antibodies isolated from human immunoglobulin libraries or from animals transgenic for one or more human immunoglobulins and that do not express endogenous immunoglobulins, as described, for example, in U.S. Pat. No. 5,939,598, the disclosure of which is incorporated herein by reference in its entirety.
[0048] The antigen used for the present invention can be modified polypeptide derived from a naturally occurring protein. The modified polypeptide may be a fragment of the naturally occurring protein. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a polypeptide derived from a naturally occurring protein. In one embodiment, the modified polypeptide derived is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a polypeptide derived from naturally occurring protein.
[0049] In the particle as provided by the present invention, a polypeptide and an antigen may be linked through at least one first attachment site which is present in the polypeptide and at least one second attachment site which is present in the antigen.
[0050] As used herein, each of "a first attachment site" and "a second attachment site" refers to a site where more than one substance is linked each other.
[0051] In one embodiment, the polypeptide and the antigen are directly fused. Alternatively, one or two linkers may intervene between N-terminal residue of the antigen and the polypeptide and/or between C-terminal residue of the antigen and the polypeptide.
[0052] The antigen or the polypeptide can be truncated and replaced by short linkers. In some embodiments, the antigen or the polypeptide include one or more peptide linkers. Typically, a linker consists of from 2 to 25 amino acids. Usually, it is from 2 to 15 amino acids in length, although in certain circumstances, it can be only one, such as a single glycine residue.
[0053] In one embodiment, a nucleic acid molecule, in which polynucleotide encoding the polypeptide is genetically fused with polynucleotide encoding the antigen, is expressed in a host cell so that the first attachment site and the second attachment site are linked through a peptide bond. In this case, the polypeptide and the antigen are linked through a peptide bond. Relating to this embodiment, the first attachment site and/or the second attachment site may be genetically modified from the original polypeptide or antigen. For example, the first attachment site is modified from the polypeptide so that through a linker peptide including SG, GS, SGG, GGS and SGSG, the polypeptide is conjugated with the antigen.
[0054] When the polypeptide are chemically conjugated with the antigen, the first attachment site and the second attachment site may be linked through a chemical cross-linker which is a chemical compound.
[0055] Examples of the cross-linker include, but are not limited to, SMPH, Sulfo-MBS, Sulfo-EMCS, Sulfo-GMBS, Sulfo-SIAB, Sulfo-SMPB, Sulfo-SMCC, SVSB, SIA and other cross-linkers available from the Pierce Chemical Company.
[0056] In one embodiment, the particle provided by the present invention comprises a polypeptide linked to an antigen, wherein spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 .ANG. or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom.
[0057] The antigen used for the present invention can be designed by a person skilled in the art. For example, the antigen used for the present invention may be a naturally occurring protein or a fragment thereof. Alternatively, the antigen used for the present invention may be a protein modified from a naturally occurring protein or a fragment thereof. A person skilled in the art can design the antigen so that spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 .ANG. or less when the distance is determined in a crystal of the antigen or a naturally occurring protein containing the antigen or modified protein therefrom. For example, the antigen used for the particle provided by the present invention can be designed using a free software including PyMOL (e.g. PyMOL v0.99: http:/www.pymol.org). In one embodiment, the spatial distance between the N-terminal residue and C-terminal residue of the antigen is 30 .ANG.(angstrom) or less, 20 .ANG. or less, or 10 .ANG. or less (e.g. from 5 .ANG. to 15 .ANG., from 5 .ANG. to 12 .ANG., from 5 .ANG. to 11 .ANG., from 5 .ANG. to 10 .ANG., from 5 .ANG. to 8 .ANG., from 8 .ANG. to 15 .ANG., from 8 .ANG. to 13 .ANG., from 8 .ANG. to 12 .ANG., from 8 .ANG. to 11 .ANG., from 9 .ANG. to 12 .ANG., from 9 .ANG. to 11 .ANG., from 9 .ANG. to 10 .ANG. or from 10 .ANG. to 11 .ANG.).
Chikungunya Virus Like Particle or a Venezuelan Equine Encephalitis Virus Like Particle
[0058] In one embodiment, the present invention provides a Chikungunya virus like particle or a Venezuelan equine encephalitis virus like particle comprising a Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and at least one malaria antigen, wherein said Chikungunya virus structural polypeptide or said Venezuelan equine encephalitis virus structural polypeptide comprises at least one first attachment site and said at least one malaria antigen comprises at least one second attachment site, and wherein said Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and said at least one antigen are linked through said at least one first and said at least one second attachment site.
[0059] In one embodiment, a spatial distance between the N-terminal residue and C-terminal residue of the malaria antigen may be 30 .ANG. or less; 25 .ANG. or less; 20 .ANG. or less; 15 .ANG. or less; 14 .ANG. or less; 13 .ANG. or less; 12 .ANG. or less; 11 .ANG. or less; 10 .ANG. or less; 9 .ANG. or less; or 8 .ANG. or less (e.g. from 5 .ANG. to 15 .ANG., from 5 .ANG. to 12 .ANG., from 5 .ANG. to 11 .ANG., from 5 .ANG. to 10 .ANG., from 5 .ANG. to 8 .ANG., from 8 .ANG. to 15 .ANG., from 8 .ANG. to 13 .ANG., from 8 .ANG. to 12 .ANG., from 8 .ANG. to 11 .ANG., from 9 .ANG. to 12 .ANG., from 9 .ANG. to 11 .ANG., from 9 .ANG. to 10 .ANG. or from 10 .ANG. to 11 .ANG.) when the distance is determined in a crystal of the malaria antigen or a naturally occurring protein containing the malaria antigen or modified protein therefrom.
[0060] In one embodiment, the malaria antigen is linked to the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide by way of chemical cross-linking or as a fusion protein produced by way of genetic engineering.
[0061] A Chikungunya or Venezuelan equine encephalitis virus structural polypeptide used in the present invention may comprise a Chikungunya or Venezuelan equine encephalitis virus envelope protein and/or a capsid.
[0062] Examples of Chikungunya virus include, but are not limited to, strains of 37997 and LR2006 OPY-1.
[0063] Examples of Venezuelan equine encephalitis virus include, but are not limited to, TC-83.
[0064] Chikungunya or Venezuelan equine encephalitis virus structural polypeptide used in the present invention may naturally occurring virus structural polypeptide or modified polypeptide thereof. The modified polypeptide may be a fragment of the naturally occurring virus structural polypeptide. In one embodiment, the modified polypeptide has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring viral capsid and/or envelope protein. In one embodiment, the modified polypeptide is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a naturally occurring viral capsid and/or envelope protein. For example, K64A or K64N mutatation may be introduced into a capsid of Venezuelan equine encephalitis virus structural polypeptide used in the present invention.
[0065] Chikungunya or Venezuelan equine encephalitis virus structural polypeptide may consist of or comprise a capsid, E2 and E1.
[0066] Examples of Chikungunya virus structural polypeptide include, but are not limited to, Capsid-E2-E1 of Chikungunya virus Strain 37997, and Capsid-E2-E1 of Chikungunya virus LR2006 OPY-1.
[0067] Examples of Venezuelan equine encephalitis virus structural polypeptide include, but are not limited to, Capsid-E2-E1 of Venezuelan equine encephalitis virus Strain TC-83.
[0068] An exemplary Chikungunya virus structural polypeptide sequence is provided at Genbank Accession No. ABX40006.1, which is described below (SEQ ID No. 1):
TABLE-US-00003 mefiptqtfynrryqprpwtprptiqvirprprpqrqagqlaqlis avnkltmravpqqkprrnrknkkqkqkqqapqnntnqkkqppkkkp aqkkkkpgrrermcmkiendcifevkhegkvtgyaclvgdkvmkpa hvkgtidnadlaklafkrsskydlecaqipvhmksdaskfthekpe gyynwhhgavgysggrftiptgagkpgdsgrpifdnkgrvvaivig ganegartalsvvtwnkdivtkitpegaeewslaipvmcilanttf pcsqppctpccyekepeetlrmlednvmrpgyyqllqasltcsphr grrstkdnfnvykatrpylahcpdcgeghschspvalerirneatd gtlkiqvslgigiktddshdwtklrymdnhmpadaeraglevrtsa pctitgtmghfilarcpkgetltvgftdsrkishscthpfhhdppv igrekfhsrpqhgkelpcstyvqstaatteeievhmppdtpdrtlm sqqsgnvkitvngqtvrykencggsnegltttdkvinnckvdgcha avtnhkkwqynsplvprnaelgdrkgkihipfplanvtcrvpkarn ptvtygknqvimllypdhptilsyrnmgeepnyqeewvmhkkevvl tvpteglevtwgnnepykywpqlstngtahghpheiilyyyelypt mtvvvvsvatfillsmvgmaagmcmcarrrcitpyeltpgatvpfl isliccirtakaatyqeaaiylwneqqplfwlqaliplaalivlcn cirlipcccktlaflavmsvgahtvsayehvtvipntvgvpyktlv nrpgyspmvlemellsvtleptlsidyitceyktvipspyvkccgt aeckdknipdysckvftgvypfmwggaycfcdaentqlseahveks escktefasayrahtasasakirylyqgnnitvtayangdhavtvk dakfivgpmssawtpfdnkivvykgdvynmdyppfgagrpgqfgdi gsrtpeskdvyantqlvlqrpavgtvhvpysqapsgfkywlkerga slqhtapfgcgiatnpvravncavgnmpisidipeaaftrvvdaps ltdmscevpacthssdfggvaiikyaaskkgkcavhsmtnavtire aeievegnsqlqisfstalasaefrvqvcstqvhcaaechppkdhi vnypashttlgvgdisatamswvqkitggvglvvavaalilivvlc vsfsrh
[0069] Another exemplary Chikungunya virus structural polypeptide sequence is provided at Genbank Accession No. ABX40011.1, which is described below (SEQ ID No. 2):
TABLE-US-00004 mefiptqtfynrryqprpwaprptiqvirprprpqrqagqlaqlis avnkltmravpqqkprrnrknkkqrqkkqapqndpkqkkqppqkkp aqkkkkpgrrermcmkiendcifevkhegkvmgyaclvgdkvmkpa hvkgtidnadlaklafkrsskydlecaqipvhmksdaskfthekpe gyynwhhgavqysggrftiptgagkpgdsgrpifdnkgrvvaivlg ganegartalsvvtwnkdivtkitpegaeewslalpvlcllanttf pcsqppctpccyekepestlrmlednvmrpgyyqllkasltcsphr qrrstkdnfnvykatrpylahcpdcgeghschspialerirneatd gtlkiqvslqigiktddshdwtklrymdshtpadaeragllvrtsa pctitgtmghfilarcpkgetltvgftdsrkishtcthpfhheppv igrerfhsrpqhgkelpcstyvqstaataeeievhmppdtpdrtlm tqqsgnvkitvngqtvrykcncggsnegltttdkvinnckidqcha avtnhknwqynsplvprnaelgdrkgkihipfplanvtcrvpkarn ptvtygknqvtmllypdhptllsyrnmgqepnyheewvthkkevtl tvpteglevtwgnnepykywpqmstngtahghpheiilyyyelypt mtvvivsvasfvllsmvgtavgmcvcarrrcitpyeltpgatvpfl lsllccvrttkaatyyeaaaylwneqqplfwlqaliplaalivlcn clkllpcccktlaflavmsigahtvsayehvtvipntvgvpyktlv nrpgyspmvlemelqsvtleptlsldyitceyktvipspyvkccgt aeckdkslpdysckvftgvypfmwggaycfcdaentqlseahveks escktefasayrahtasasaklrvlyqgnnitvaayangdhavtvk dakfvvgpmssawtpfdnkivvykgdvynmdyppfgagrpgqfgdi qsrtpeskdvyantqlvlqrpaagtvhvpysqapsgfkywlkerga slqhtapfgcqiatnpvravncavgnipisidipdaaftrvvdaps vtdmscevpacthssdfggvaiikytaskkgkcavhsmtnavtire advevegnsqlqisfstalasaefrvqvcstqvhcaaachppkdhi vnypashttlgvqdisttamswvqkitggvglivavaalilivvlc vsfsrh.
[0070] An exemplary Venezuelan equine encephalitis virus structural polypeptide is provided at Genbank Accession No. L01443.1 (http://www.ncbi.nlm.nih.gov/nuccore/L01443.1), which is described below (SEQ ID No. 3):
TABLE-US-00005 mfpfqpmypmqpmpyrnpfaaprrpwfprtdpflamqvqeltrsma nitfkqrrdappegpsaakpkkeasqkqkgggqgkkkknqgkkkak tgppnpkaqngnkkktnkkpqkrqrmvmklesdktfpimiegking yacvvggklfrpmhvegkidndvlaalktkkaskydleyadvpqnm radtfkythekpqgyyswhhgavqyengrftvpkgvgakgdsgrpi ldnqgrvvaivaggvnegsrtalsvvmwnekgvtvkytpenceqws lvttmcilanvtfpcaqppicydrkpaetlamlsvnvdnpgydell eaavkcpgrkrrsteelfneykltrpymarcircavgschspiaie avksdghdgyvraqtssqygldssgnikgrtmrydmhgtikeiplh qvslytsrpchivdghgyfllarepagdsitmefkkdsvrhscsvp yevkfnpvgrelythppehgveqacqvyahdaqnrgayvemhlpgs evdsslvslsgssvtvtppdgtsalvececggtkisetinktkqfs qctkkeqcrayrlqndkwvynsdklpkaagatlkgklhvpflladg kctvplapepmitfgfrsyslkihpknptylitrqladephythel isepavrnftvtekgwefvwgnhppkrfwagetapgnphglphevi thyyhrypmstilglsicaaiatvsvaastwlfcrsrvacltpyrl tpnaripfclaviccartaraettwesldhlwnnnqqmfwiqllip laalivvtrllrcvccvvpflvmagaagagayehattmpsqagisy ntivnragyaplpisitptkikliptvnleyvtchyktgmdspaik ccgsqectptyrpdeqckvftgvypfmwggaycfcdtentqvskay vmksddcladhaeaykahtasvqaflnitvgehsivttvyvngetp vnfngvkitagplstawtpfdrkivqyageiynydfpeygagqpga fgdiqsrtvsssdlyantnlvlqrpkagaihvpytqapsgfeawkk dkapsikftapfgceiytnpiraencavgsiplafdipdalftrvs etptisaaectlnecvyssdfggiatvkysasksgkcavhvpsgta tikeaaveltecosatihfstanihpefrlqictsyvtckgdchpp kdhivthpqyhaqtftaaysktawtwltsllggsaviiiiglvlat ivamyvltnqkhn.
[0071] In one embodiment, a first attachment site comprises an amino group, preferably an amino group of a lysine residue. In one embodiment, the second attachment site comprises sulfhydryl group, preferably, a sulfhydryl group of a cysteine.
[0072] In one embodiment, a conjugation of more than two substances (e.g. antigen and Chikungunya or Venezuelan equine encephalitis virus structural polypeptide) through a first attachment site or a second attachment site is achieved using chemical cross linker. Examples of the cross-linker include, but are not limited to, SMPH, Sulfo-MBS, Sulfo-EMCS, Sulfo-GMBS, Sulfo-SIAB, Sulfo-SMPB, Sulfo-SMCC, SVSB, SIA and other cross-linkers available from the Pierce Chemical Company.
[0073] According to the present invention, a Chikungunya or Venezuelan equine encephalitis virus like particle comprising a Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and an antigen, wherein said Chikungunya or Venezuelan equine encephalitis virus structural polypeptide and said antigen are expressed as a fusion protein can be provided.
[0074] In one embodiment, the antigen can be fused with any site of the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide. For example, the antigen may be directly or indirectly linked to N- or C-terminal of the Chikungunya or Venezuelan equine encephalitis virus structural polypeptide, or the antigen may be inserted into Chikungunya or Venezuelan equine encephalitis virus structural protein.
[0075] In one embodiment, at least one antigen is inserted into E2 of Chikungunya or Venezuelan equine encephalitis virus structural protein. For example, regarding Chikungunya virus structural protein, at least one antigen is inserted between residues 519 and 520 of SEQ ID Nos.1 or 2 (i.e. between G at 519-position and Q at 520-position of SEQ ID Nos.1 or 2); between residues 530 and 531 of SEQ ID Nos.1 or 2 (i.e. between G at 530-position and S at 531-position of SEQ ID Nos.1 or 2); between residues 531 and 532 of SEQ ID Nos.1 or 2 (i.e. between S at 531-position and N at 532-position of SEQ ID Nos.1 or 2); between residues 529 and 530 of SEQ ID Nos.1 or 2(i.e. between G at 529-position and G at 530-position of SEQ ID Nos.1 or 2); or between residues 510 and 511 of SEQ ID Nos.1 or 2(i.e. between S at 510-position and G at 511-position of SEQ ID Nos.1 or 2); or between residues 511 and 512 of SEQ ID Nos.1 or 2(i.e. between G at 511-position and N at 512-position of SEQ ID Nos.1 or 2); or between residues 509 and 510 of SEQ ID Nos.1 or 2(i.e. between Q at 509-position and S at 510-position of SEQ ID Nos.1 or 2).
[0076] For example, regarding Venezuelan equine encephalitis virus structural protein, at least one antigen is inserted between residues 517 and 518 of SEQ ID No.3 (i.e. between G at 517-position and S at 518-position of SEQ ID No.3); between residues 518 and 519 of SEQ ID No.3 (i.e. between S at 518-position and S at 519-position of SEQ ID No.3); between residues 519 and 520 of SEQ ID No.3 (i.e. between S at 519-position and V at 520-position of SEQ ID No.3); between residues 515 and 516 of SEQ ID No.3(i.e. between L at 515-position and S at 516-position of SEQ ID No.3); between residues 516 and 517 of SEQ ID No.3(i.e. between S at 516-position and G at 517-position of SEQ ID No.3); between residues 536 and 537 of SEQ ID No.3(i.e. between C at 536-position and G at 537-position of SEQ ID No.3); between residues 537 and 538 of SEQ ID No.3(i.e. between G at 537-position and G at 538-position of SEQ ID No.3); between residues 538 and 539 of SEQ ID No.3(i.e. between G at 538-position and T at 539-position of SEQ ID No.3).
[0077] The fusion protein may be expressed using a conventional technique in the art. A variety of expression systems can be used for the expression of the fusion protein. For example, the fusion protein can be expressed in 293 cells, Sf9 cells or E. coli.
[0078] A polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be a naturally occurring viral polypeptide or modified polypeptide thereof. In addition, a polypeptide derived from malaria antigen may be a naturally occurring polypeptide or modified polypeptide of the naturally occurring polypeptide or a fragment of the naturally occurring polypeptide or the modified peptide. The modified polypeptide may be a fragment of the naturally occurring virus structural polypeptide.
[0079] In one embodiment, the modified polypeptide derived from malaria antigen has at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to a naturally occurring polypeptide. In one embodiment, the modified peptide derived from malaria antigen is a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on a naturally occurring polypeptide derived from malaria antigen.
[0080] When a polypeptide derived from a virus is conjugated with a polypeptide derived from an antigen, a linker peptide including SG, GS, SGG, GGS SGSG and TRGGS may be used. Examples of conjugation of the polypeptide derived from a virus (referred to as "PFV" below) with the polypeptide derived from the antigen (referred to as "PFA" below) include, but not limited to: PFV-SG-PFA-GS-PFV; PFV-SG-PFA-GGS-PFV; PFV-SSG-PFA-GS-PFV; PFV-SGG-PFA-GGS-PFV; PFV-SGSG-PFA-GS-PFV; and PFA-SGG-PFA-TRGGS-PFV.
[0081] In one embodiment, the present invention provides a virus like particle comprising a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) and a polypeptide derived from malaria antigen, wherein the virus like particle is prepared by transfecting an expression vector comprising a nucleic acid molecule corresponding to the amino acid sequence represented by SEQ ID NO. 28, 31, 34, 37, 39, 41 or 43 into a mammalian cell (e.g. 293F cell). Regarding this embodiment, modified fusion protein can be also used for a virus like particle provided by the present invention, which can be prepared by transfecting an expression vector comprising a nucleic acid molecule corresponding to the amino acid sequence having at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to SEQ ID NO. 28, 31, 34, 37, 39, 41 or 43 into a mammalian cell (e.g. 293F cell).
[0082] In one embodiment, the present invention provides a virus like particle comprising or consisting of:
one or more capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); one or more E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); and one or more E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), wherein malaria antigen is inserted into E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV). For example, present invention provides a virus like particle comprising or consisting of: 240 capsids of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); 240 E1s of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); and 240 E2s of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), wherein malaria antigen is inserted into each of E2s of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV).
[0083] In this embodiment, the E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID No.50; the E1 may consist of an amino acid sequence represented by SEQ ID No.51; and the capsid may consist of an amino acid sequence represented by SEQ ID NO.: 52; or
the E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID NO.53; the E1 may consist of an amino acid sequence represented by SEQ ID NO.54; and the capsid may consist of an amino acid sequence represented by SEQ ID NO.: 55.
[0084] Further, regarding this embodiment, modified capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), modified E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) and modified E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be used for the virus like particle. For example, the modified capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the amino acid sequence represented by SEQ ID NO.: 52 or SEQ ID No. 55; the modified E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the amino acid sequence represented by SEQ ID NO.: 51 or SEQ ID No. 54; and/or the modified E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% amino acid sequence identity to the amino acid sequence represented by SEQ ID NO.: 50 or SEQ ID No. 53.
[0085] Also, the modified capsid, E1 or E2 may be a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on the capsid consisting of an amino acid sequence represented by SEQ ID NO.: 52 or SEQ ID No. 55; E1 consisting of an amino acid sequence represented by SEQ ID NO.: 51 or SEQ ID No. 54; and/or E2 consisting of an amino acid sequence represented by SEQ ID NO.: 50 or SEQ ID No. 53.
(2) Nucleotide, Vector, Host cell
[0086] In the second aspect, the present invention provides a nucleic acid molecule which is designed for expression of a particle as provided in the first aspect of the present invention.
[0087] In one embodiment, the present invention provides a nucleic acid molecule comprising a nucleotide sequence that encodes the Chikungunya or Venezuelan equine encephalitis virus like particle as described above.
[0088] Examples of the nucleotide sequence that encodes the Chikungunya or Venezuelan equine encephalitis virus like particle include, but are not limited to, a nucleotide sequence encoding envelope of Chikungunya virus Strain 37997, a nucleotide sequence encoding Capsid-envelope of Chikungunya virus Strain 37997, a nucleotide sequence encoding envelope of Chikungunya virus Strain LR2006 OPY-1, a nucleotide sequence encoding Capsid-envelope of Chikungunya virus LR2006 OPY-1, a nucleotide sequence encoding envelope of Venezuelan equine encephalitis virus Strain TC-83 and a nucleotide sequence encoding Capsid-envelope of Venezuelan equine encephalitis virus TC-83.
[0089] Regarding Chikungunya virus, an exemplary nucleotide sequence that encodes envelope is described below (SEQ ID No.4):
TABLE-US-00006 Atgagcctcgccctcccggtcttgtgcctgttggcaaacactacat tcccctgctctcagccgccttgcacaccctgctgctacgaaaagga accggaaagcaccttgcgcatgcttgaggacaacgtgatgagaccc ggatactaccagctactaaaagcatcgctgacttgctctccccacc gccaaagacgcagtactaaggacaattttaatgtctataaagccac aagaccatatctagctcattgtcctgactgcggagaagggcattcg tgccacagccctatcgcattggagcgcatcagaaatgaagcaacgg acggaacgctgaaaatccaggtctctttgcagatcgggataaagac agatgacagccacgattggaccaagctgcgctatatggatagccat acgccagcggacgcggagcgagccggattgcttgtaaggacttcag caccgtgcacgatcaccgggaccatgggacactttattctcgcccg atgcccgaaaggagagacgctgacagtgggatttacggacagcaga aagatcagccacacatgcacacacccgttccatcatgaaccacctg tgataggtagggagaggttccactctcgaccacaacatggtaaaga gttaccttgcagcacgtacgtgcagagcaccgctgccactgctgag gagatagaggtgcatatgcccccagatactcctgaccgcacgctga tgacgcagcagtctggcaacgtgaagatcacagttaatgggcagac ggtgcggtacaagtgcaactgcggtggctcaaacgagggactgaca accacagacaaagtgatcaataactgcaaaattgatcagtgccatg ctgcagtcactaatcacaagaattggcaatacaactcccctttagt cccgcgcaacgctgaactcggggaccgtaaaggaaagatccacatc ccattcccattggcaaacgtgacttgcagagtgccaaaagcaagaa accctacagtaacttacggaaaaaaccaagtcaccatgctgctgta tcctgaccatccgacactcttgtcttaccgtaacatgggacaggaa ccaaattaccacgaggagtgggtgacacacaagaaggaggttacct tgaccgtgcctactgagggtctggaggtcacttggggcaacaacga accatacaagtactggccgcagatgtctacgaacggtactgctcat ggtcacccacatgagataatcttgtactattatgagctgtacccca ctatgactgtagtcattgtgtcggtggcctcgttcgtgcttctgtc gatggtgggcacagcagtgggaatgtgtgtgtgcgcacggcgcaga tgcattacaccatatgaattaacaccaggagccactgttcccttcc tgctcagcctgctatgctgcgtcagaacgaccaaggcggccacata ttacgaggctgcggcatatctatggaacgaacagcagcccctgttc tggttgcaggctcttatcccgctggccgccttgatcgtcctgtgca actgtgcaactgtctgaaactcttgccatgctgctgtaagaccctg gcttttttagccgtaatgagcatcggtgcccacactgtgagcgcgt acgaacacgtaacagtgatcccgaacacggtgggagtaccgtataa gactcttgtcaacagaccgggttacagccccatggtgttggagatg gagctacaatcagtcaccttggaaccaacactgtcacttgactaca tcacgtgcgagtacaaaactgtcatcccctccccgtacgtgaagtg ctgtggtacagcagagtgcaaggacaagagcctaccagactacagc tgcaaggtctttactggagtctacccatttatgtggggcggcgcct actgcttttgcgacgccgaaaatacgcaattgagcgaggcacatgt agagaaatctgaatcttgcaaaacagagtttgcatcggcctacaga gcccacaccgcatcggcgtcggcgaagctccgcgtcctttaccaag gaaacaacattaccgtagctgcctacgctaacggtgaccatgccgt cacagtaaaggacgccaagtttgtcgtgggcccaatgtcctccgcc tggacaccttttgacaacaaaatcgtggtgtacaaaggcgacgtct acaacatggactacccaccttttggcgcaggaagaccaggacaatt tggtgacattcaaagtcgtacaccggaaagtaaagacgtttatgcc aacactcagttggtactacagaggccagcagcaggcacggtacatg taccatactctcaggcaccatctggcttcaagtattggctgaagga acgaggagcatcgctacagcacacggcaccgttcggttgccagatt gcgacaaacccggtaagagctgtaaattgcgctgtggggaacatac caatttccatcgacataccggatgcggcctttactagggttgtcga tgcaccctctgtaacggacatgtcatgcgaagtaccagcctgcact cactcctccgactttgggggcgtcgccatcatcaaatacacagcta gcaagaaaggtaaatgtgcagtacattcgatgaccaacgccgttac cattcgagaagccgacgtagaagtagaggggaactcccagctgcaa atatccttctcaacagccctggcaagcgccgagtttcgcgtgcaag tgtgctccacacaagtacactgcgcagccgcatgccaccctccaaa ggaccacatagtcaattacccagcatcacacaccacccttggggtc caggatatatccacaacggcaatgtcttgggtgcagaagattacgg gaggagtaggattaattgttgctgttgctgccttaattttaattgt ggtgctatgcgtgtcgtttagcaggcac
[0090] Regarding Chikungunya virus, another exemplary nucleotide sequence that encodes envelope is described below (SEQ ID No. 5):
TABLE-US-00007 Atgagtcttgccatcccagttatgtgcctgttggcaaacaccacgtt cccctgctcccagcccccttgcacgccctgctgctacgaaaaggaac cggaggaaaccctacgcatgcttgaggacaacgtcatgagacctggg tactatcagctgctacaagcatccttaacatgttctccccaccgcca gcgacgcagcaccaaggacaacttcaatgtctataaagccacaagac catacttagctcactgtcccgactgtggagaagggcactcgtgccat agtcccgtagcactagaacgcatcagaaatgaagcgacagacgggac gctgaaaatccaggtctccttgcaaatcggaataaagacggatgaca gccacgattggaccaagctgcgttatatggacaaccacatgccagca gacgcagagagggcggggctatttgtaagaacatcagcaccgtgtac gattactggaacaatgggacacttcatcctggcccgatgtccaaaag gggaaactctgacggtgggattcactgacagtaggaagattagtcac tcatgtacgcacccatttcaccacgaccctcctgtgataggtcggga aaaattccattcccgaccgcagcacggtaaagagctaccttgcagca cgtacgtgcagagcaccgccgcaactaccgaggagatagaggtacac atgcccccagacacccctgatcgcacattaatgtcacaacagtccgg caacgtaaagatcacagtcaatggccagacggtgcggtacaagtgta attgcggtggctcaaatgaaggactaacaactacagacaaagtgatt aataactgcaaggttgatcaatgtcatgccgcggtcaccaatcacaa aaagtggcagtataactcccctctggtcccgcgtaatgctgaacttg gggaccgaaaaggaaaaattcacatcccgtttccgctggcaaatgta acatgcagggtgcctaaagcaaggaaccccaccgtgacgtacgggaa aaaccaagtcatcatgctactgtatcctgaccacccaacactcctgt cctaccggaatatgggagaagaaccaaactatcaagaagagtgggtg atgcataagaaggaagtcgtgctaaccgtgccgactgaagggctcga ggtcacgtggggcaacaacgagccgtataagtattggccgcagttat ctacaaacggtacagcccatggccacccgcatgagataattctgtat tattatgagctgtaccccactatgactgtagtagttgtgtcagtggc cacgttcatactcctgtcgatggtgggtatggcagcggggatgtgca tgtgtgcacgacgcagatgcatcacaccgtatgaactgacaccagga gctaccgtccctttcctgcttagcctaatatgctgcatcagaacagc taaagcggccacataccaagaggctgcgatatacctgtggaacgagc agcaacctttgttttggctacaagcccttattccgctggcagccctg attgttctatgcaactgtctgagactcttaccatgctgctgtaaaac gttggcttttttagccgtaatgagcgtcggtgcccacactgtgagcg cgtacgaacacgtaacagtgatcccgaacacggtgggagtaccgtat aagactctagtcaatagacctggctacagccccatggtattggagat ggaactactgtcagtcactttggagccaacactatcgcttgattaca tcacgtgcgagtacaaaaccgtcatcccgtctccgtacgtgaagtgc tgcggtacagcagagtgcaaggacaaaaacctacctgactacagctg taaggtcttcaccggcgtctacccatttatgtggggcggcgcctact gcttctgcgacgctgaaaacacgcagttgagcgaagcacacgtggag aagtccgaatcatgcaaaacagaatttgcatcagcatacagggctca taccgcatctgcatcagctaagctccgcgtcctttaccaaggaaata acatcactgtaactgcctatgcaaacggcgaccatgccgtcacagtt aaggacgccaaattcattgtggggccaatgtcttcagcctggacacc tttcgacaacaaaattgtggtgtacaaaggtgacgtctataacatgg actacccgccctttggcgcaggaagaccaggacaatttggcgatatc caaagtcgcacacctgagagtaaagacgtctatgctaatacacaact ggtactgcagagaccggctgtgggtacggtacacgtgccatactctc aggcaccatctggctttaagtattggctaaaagaacgcggggcgtcg ctgcagcacacagcaccatttggctgccaaatagcaacaaacccggt aagagcggtgaactgcgccgtagggaacatgcccatctccatcgaca taccggaagcggccttcactagggtcgtcgacgcgccctctttaacg gacatgtcgtgcgaggtaccagcctcgacccattcctcagactttgg gggcgtcgccattattaaatatgcagccagcaagaaaggcaagtgtg cggtgcattcgatgactaacgccgtcactattcgggaagctgagata gaagttgaagggaattctcagctgcaaatctctttctcgacggcctt agccagcgccgaattccgcgtacaagtctgttctacacaagtacact gtgcagccgagtgccaccccccgaaggaccacatagtcaactacccg gcgtcacataccaccctcggggtccaggacatctccgctacggcgat gtcatgggtgcagaagatcacgggaggtgtgggactggttgttgctg ttgccgcactgattctaatcgtggtgctatgcgtgtcgttcagcagg cac
[0091] Regarding Chikungunya virus, an exemplary nucleotide sequence that encodes a Capsid-envelope is described below (SEQ ID No. 6):
TABLE-US-00008 atggagttcatcccgacgcaaactttctataacagaaggtaccaacc ccgaccctgggccccacgccctacaattcaagtaattagacctagac cacgtccacagaggcaggctgggcaactcgcccagctgatctccgca gtcaacaaattgaccatgcgcgcggtacctcaacagaagcctcgcag aaatcggaaaaacaagaagcaaaggcagaagaagcaggcgccgcaaa acgacccaaagcaaaagaagcaaccaccacaaaagaagccggctcaa aagaagaagaaaccaggccgtagggagagaatgtgcatgaaaattga aaatgattgcatcttcgaagtcaagcatgaaggcaaagtgatgggct acgcatgcctggtgggggataaagtaatgaaaccagcacatgtgaag ggaactatcgacaataccgatctggctaaactggcctttaagcggtc gtctaaatacgatcttgaatgtgcacagataccggtgcacatgaagt ctgatgcctcgaagtttacccacgagaaacccgaggggtactataac tggcatcacggagcagtgcagtattcaggaggccggttcactatccc gacgggtgcaggcaagccgggagacagcggcagaccgatcttcgaca acaaaggacgggtggtggccatcgtcctaggaggggccaacgaaggt gcccgcacggccctotccgtggtgacgtggaacaaagacatcgtcac aaaaattacccctgagggagccgaagagtggagcctcgccctcccgg tcttgtgcctgttggcaaacactacattcccctgctctcagccgcct tgcacaccctgctgctacgaaaaggaaccggaaagcaccttgcgcat gcttgaggacaacgtgatgagacccggatactaccagctactaaaag catcgctgacttgctctccccaccgccaaagacgcagtactaaggac aattttaatgtctataaagccacaagaccatatctagctcattgtcc tgactgcggagaagggcattcgtgccacagccctatcgcattggagc gcatcagaaatgaagcaacggacggaacgctgaaaatccaggtctct ttgcagatcgggataaagacagatgacagccacgattggaccaagct gcgctatatggatagccatacgccagcggacgcggagcgagccggat tgcttgtaaggacttcagcaccgtgcacgatcaccgggaccatggga cactttattctcgcccgatgcccgaaaggagagacgctgacagtggg atttacggacagcagaaagatcagccacacatgcacacacccgttcc atcatgaaccacctgtgataggtagggagaggttccactctcgacca caacatggtaaagagttaccttgcagcacgtacgtgcagagcaccgc tgccactgctgaggagatagaggtgcatatgcccccagatactcctg accgcacgctgatgacgcagcagtctggcaacgtgaagatcacagtt aatgggcagacggtgcggtacaagtgcaactgcggtggctcaaacga gggactgacaaccacagacaaagtgatcaataactgcaaaattgatc agtgccatgctgcagtcactaatcacaagaattggcaatacaactcc cctttagtcccgcgcaacgctgaactcggggaccgtaaaggaaagat ccacatcccattcccattggcaaacgtgacttgcagagtgccaaaag caagaaaccctacagtaacttacggaaaaaaccaagtcaccatgctg ctgtatcctgaccatccgacactcttgtcttaccgtaacatgggaca ggaaccaaattaccacgaggagtgggtgacacacaagaaggaggtta ccttgaccgtgcctactgagggtctggaggtcacttggggcaacaac gaaccatacaagtactggccgcagatgtctacgaacggtactgctca tggtcacccacatgagataatcttgtactattatgagctgtacccca ctatgactgtagtcattgtgtcggtggcctcgttcgtgcttctgtcg atggtgggcacagcagtgggaatgtgtgtgtgcgcacggcgcagatg cattacaccatatgaattaacaccaggagccactgttcccttcctgc tcagcctgctatgctgcgtcagaacgaccaaggcggccacatattac gaggctgcggcatatctatggaacgaacagcagcccctgttctggtt gcaggctcttatcccgctggccgccttgatcgtcctgtgcaactgtc tgaaactcttgccatgctgctgtaagaccctggcttttttagccgta atgagcatcggtgcccacactgtgagcgcgtacgaacacgtaacagt gatcccgaacacggtgggagtaccgtataagactcttgtcaacagac cgggttacagccccatggtgttggagatggagctacaatcagtcacc ttggaaccaacactgtcacttgactacatcacgtgcgagtacaaaac tgtcatcccctccccgtacgtgaagtgctgtggtacagcagagtgca aggacaagagcctaccagactacagctgcaaggtctttactggagtc tacccatttatgtggggcggcgcctactgcttttgcgacgccgaaaa tacgcaattgagcgaggcacatgtagagaaatctgaatcttgcaaaa cagagtttgcatcggcctacagagcccacaccgcatcggcgtcggcg aagctccgcgtcctttaccaaggaaacaacattaccgtagctgccta cgctaacggtgaccatgccgtcacagtaaaggacgccaagtttgtcg tgggcccaatgtcctccgcctggacaccttttgacaacaaaatcgtg gtgtacaaaggcgacgtctacaacatggactacccaccttttggcgc aggaagaccaggacaatttggtgacattcaaagtcgtacaccggaaa gtaaagacgtttatgccaacactcagttggtactacagaggccagca gcaggcacggtacatgtaccatactctcaggcaccatctggcttcaa gtattggctgaaggaacgaggagcatcgctacagcacacggcaccgt tcggttgccagattgcgacaaacccggtaagagctgtaaattgcgct gtggggaacataccaatttccatcgacataccggatgcggcctttac tagggttgtcgatgcaccctctgtaacggacatgtcatgcgaagtac cagcctgcactcactcctccgactttgggggcgtcgccatcatcaaa tacacagctagcaagaaaggtaaatgtgcagtacattcgatgaccaa cgccgttaccattcgagaagccgacgtagaagtagaggggaactccc agctgcaaatatccttctcaacagccctggcaagcgccgagtttcgc gtgcaagtgtgctccacacaagtacactgcgcagccgcatgccaccc tccaaaggaccacatagtcaattacccagcatcacacaccacccttg gggtccaggatatatccacaacggcaatgtcttgggtgcagaagatt acgggaggagtaggattaattgttgctgttgctgccttaattttaat tgtggtgctatgcgtgtcgtttagcaggcactaa.
[0092] Regarding Chikungunya virus, another exemplary nucleotide sequence that encodes a Capsid-envelope is described below (SEQ ID No. 7):
TABLE-US-00009 atggagttcatcccaacccaaactttttacaataggaggtaccagcc tcgaccctggactccgcgccctactatccaagtcatcaggcccagac cgcgccctcagaggcaagctgggcaacttgcccagctgatctcagca gttaataaactgacaatgcgcgcggtaccacaacagaagccacgcag gaatcggaagaataagaagcaaaagcaaaaacaacaggcgccacaaa acaacacaaatcaaaagaagcagccacctaaaaagaaaccggctcaa aagaaaaagaagccgggccgcagagagaggatgtgcatgaaaatcga aaatgattgtattttcgaagtcaagcacgaaggtaaggtaacaggtt acgcgtgcctggtgggggacaaagtaatgaaaccagcacacgtaaag gggaccatcgataacgcggacctggccaaactggcctttaagcggtc atctaagtatgaccttgaatgcgcgcagatacccgtgcacatgaagt ccgacgcttcgaagttcacccatgagaaaccggaggggtactacaac tggcaccacggagcagtacagtactcaggaggccggttcaccatccc tacaggtgctggcaaaccaggggacagcggcagaccgatcttcgaca acaagggacgcgtggtggccatagtcttaggaggagctaatgaagga gcccgtacagccctctcggtggtgacctggaataaagacattgtcac taaaatcacccccgagggggccgaagagtggagtcttgccatcccag ttatgtgcctgttggcaaacaccacgttcccctgctcccagccccct tgcacgccctgctgctacgaaaaggaaccggaggaaaccctacgcat gcttgaggacaacgtcatgagacctgggtactatcagctgctacaag catccttaacatgttctccccaccgccagcgacgcagcaccaaggac aacttcaatgtctataaagccacaagaccatacttagctcactgtcc cgactgtggagaagggcactcgtgccatagtcccgtagcactagaac gcatcagaaatgaagcgacagacgggacgctgaaaatccaggtctcc ttgcaaatcggaataaagacggatgacagccacgattggaccaagct gcgttatatggacaaccacatgccagcagacgcagagagggcggggc tatttgtaagaacatcagcaccgtgtacgattactggaacaatggga cacttcatcctggcccgatgtccaaaaggggaaactctgacggtggg attcactgacagtaggaagattagtcactcatgtacgcacccatttc accacgaccctcctgtgataggtcgggaaaaattccattcccgaccg cagcacggtaaagagctaccttgcagcacgtacgtgcagagcaccgc cgcaactaccgaggagatagaggtacacatgcccccagacacccctg atcgcacattaatgtcacaacagtccggcaacgtaaagatcacagtc aatggccagacggtgcggtacaagtgtaattgcggtggctcaaatga aggactaacaactacagacaaagtgattaataactgcaaggttgatc aatgtcatgccgcggtcaccaatcacaaaaagtggcagtataactcc cctctggtcccgcgtaatgctgaacttggggaccgaaaaggaaaaat tcacatcccgtttccgctggcaaatgtaacatgcagggtgcctaaag caaggaaccccaccgtgacgtacgggaaaaaccaagtcatcatgcta ctgtatcctgaccacccaacactcctgtcctaccggaatatgggaga agaaccaaactatcaagaagagtgggtgatgcataagaaggaagtcg tgctaaccgtgccgactgaagggctcgaggtcacgtggggcaacaac gagccgtataagtattggccgcagttatctacaaacggtacagccca tggccacccgcatgagataattctgtattattatgagctgtacccca ctatgactgtagtagttgtgtcagtggccacgttcatactcctgtcg atggtgggtatggcagcggggatgtgcatgtgtgcacgacgcagatg catcacaccgtatgaactgacaccaggagctaccgtccctttcctgc ttagcctaatatgctgcatcagaacagctaaagcggccacataccaa gaggctgcgatatacctgtggaacgagcagcaacctttgttttggct acaagcccttattccgctggcagccctgattgttctatgcaactgtc tgagactcttaccatgctgctgtaaaacgttggcttttttagccgta atgagcgtcggtgcccacactgtgagcgcgtacgaacacgtaacagt gatcccgaacacggtgggagtaccgtataagactctagtcaatagac ctggctacagccccatggtattggagatggaactactgtcagtcact ttggagccaacactatcgcttgattacatcacgtgcgagtacaaaac cgtcatcccgtctccgtacgtgaagtgctgcggtacagcagagtgca aggacaaaaacctacctgactacagctgtaaggtcttcaccggcgtc tacccatttatgtggggcggcgcctactgcttctgcgacgctgaaaa cacgcagttgagcgaagcacacgtggagaagtccgaatcatgcaaaa cagaatttqcatcagcatacagggctcataccgcatctgcatcagct aagctccgcgtcctttaccaaggaaataacatcactgtaactgccta tgcaaacggcgaccatgccgtcacagttaaggacgccaaattcattg tggggccaatgtcttcagcctggacacctttcgacaacaaaattgtg gtgtacaaaggtgacgtctataacatggactacccgccctttggcgc aggaagaccaggacaatttggcgatatccaaagtcgcacacctgaga gtaaagacgtctatgctaatacacaactggtactgcagagaccggct gtgggtacggtacacgtgccatactctcaggcaccatctggctttaa gtattggctaaaagaacgcggggcgtcgctgcagcacacagcaccat ttggctgccaaatagcaacaaacccggtaagagcggtgaactgcgcc gtagggaacatgcccatctccatcgacataccggaagcggccttcac tagggtcgtcgacgcgccctctttaacggacatgtcgtgcgaggtac cagcctgcacccattcctcagactttgggggcgtcgccattattaaa tatgcagccagcaagaaaggcaagtgtgcggtgcattcgatgactaa cgccgtcactattcgggaagctgagatagaagttgaagggaattctc agctgcaaatctctttctcgacggccttagccagcgccgaattccgc gtacaagtctgttctacacaagtacactgtgcagccgagtgccaccc cccgaaggaccacatagtcaactacccggcgtcacataccaccctcg gggtccaggacatctccgctacggcgatgtcatgggtgcagaagatc acgggaggtgtgggactggttgttgctgttgccgcactgattctaat cgtggtgctatgcgtgtcgttcagcaggcactaa.
[0093] In one embodiment, the present invention provides a vector comprising the nucleic acid molecule as described above, wherein the vector optionally comprises an expression control sequence operably linked to the nucleic acid molecule.
[0094] Examples of an expression control sequence include, but are not limited to, promoter such as CMV promoter, phage lambda PL promoter, the E. coli lac, phoA and tac promoters, the SV40 early and late promoters, and promoters of retroviral LTRs.
[0095] In this embodiment, the vector comprising an expression control sequence operably linked to the nucleic acid molecule as described above can be used as an expression vector for preparing the particle provided by the first aspect of the present invention.
[0096] The expression vectors can be prepared by a person skilled in the art based on WO/2012/006180, the entire contents of which are incorporated by reference herein.
[0097] Examples of vectors which can be used for expressing a virus like particle comprising a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) and a polypeptide of antigen include a vector shown in VLP_CHI 512 vector (SEQ ID No. 8) containing CHIKV VLP polynucleotide (SEQ ID No. 13; corresponding amino acid sequence represented by SEQ ID No.14); and VLP_CHI 532 vector (SEQ ID No.: 9) containing CHIKV VLP polynucleotide (SEQ ID No. 15; corresponding amino acid sequence represented by SEQ ID No. 16)
[0098] The expression vectors can be prepared by a person skilled in the art based on US2012/0003266, the entire contents of which are incorporated by reference herein.
[0099] Examples of vectors which can be used for expressing a virus like particle comprising a fusion protein of a polypeptide derived from Venezuelan equine encephalitis virus (VEEV) and a polypeptide of antigen include a vector shown in VLP_VEEV VLP 518 vector (SEQ ID No. 10) containing VEEV VLP polynucleotide (SEQ ID No. 17; corresponding amino acid sequence represented by SEQ ID No.18); VLP_VEEV VLP 519 vector (SEQ ID No.11) containing VEEV VLP polynucleotide (SEQ ID No. 19; corresponding amino acid sequence represented by SEQ ID No.20); and VLP_VEEV VLP 538 vector (SEQ ID No.: 12) containing VEEV VLP polynucleotide (SEQ ID No. 21; corresponding amino acid sequence represented by SEQ ID No. 22)
[0100] In one embodiment, the present invention provides a nucleic acid molecule which is designed for expression of a virus like particle comprising a fusion protein of a polypeptide derived from Chikungunya virus (CHIKV) or Venezuela equine encephalitis virus (VEEV) and a polypeptide derived from malaria antigen, which consists of a nucleotide sequence represented by SEQ ID Nos.26-27, 29-30, 32-33, 35-36, 38, 40 or 42.
[0101] In one embodiment, the present invention provides a nucleic acid molecule which is modified from the nucleic acid molecule having a nucleotide sequence represented by any one of SEQ ID Nos.26-27, 29-30, 32-33 or 35-36, 38, 40 or 42. The modified nucleic acid molecule may have at least 70%, 75%, 80%, 85%, 90%, 95% or 98% nucleotide sequence identity to the nucleic acid molecule having a nucleotide sequence represented by any one of SEQ ID Nos.26-27, 29-30, 32-33, 35-36, 38, 40 or 42. Also, the modified nucleic acid molecule may be a mutant where at most 10% of the amino acids are deleted, substituted, and/or added based on the nucleic acid molecule having a nucleotide sequence represented by any one of SEQ ID Nos.26-27, 29-30, 32-33, 35-36, 38, 40 or 42.
(3) Composition or Vaccine
[0102] In the third aspect, the present invention provides a composition or vaccine comprising the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention.
[0103] In one embodiment, the present invention provides a composition or vaccine comprising the Alphavirus or Flavivirus virus like particle (e.g. Chikungunya virus like particle or Venezuelan equine encephalitis virus like particle) as described above or the nucleic acid molecule as described above. The content of the Alphavirus or Flavivirus virus like particle and the content of the nucleic acid molecule may be 0.00001-1 w/w %.
[0104] Dosage amount of the particle provided in the first aspect of the present invention (e.g. CHIKV VLP or VEEV VLP) may be 1-500 .mu.g/day.
[0105] One or more malaria antigens may be used for one composition or one vaccine provided by the third aspect of the present invention.
[0106] The composition or vaccine may further comprise a pharmaceutical acceptable carrier and/or adjuvant. Examples of adjuvant include, but are not limited to, aluminium salts, sodium hydroxide, Freund's complete adjuvant, Freund's incomplete adjuvant and Ribi solution (Sigma Adjuvant system, Sigma-Aldrich). The composition or vaccine provided in the third aspect of the present invention may contain buffering agent such as dibasic sodium phosphate hydrate, sodium dihydrogen phosphate and sodium chloride; and preserving agent such as thimerosal. In one embodiment, the composition or vaccine is an aqueous solution containing 0.001-1 w/w % of the particle provided in the first aspect of the present invention (e.g. CHIKV VLP or VEEV VLP), 1-10w/w % of buffering agent, 0.01-1w/w % of adjuvant and 0.00001-0.001w/w % of preserving agent.
[0107] A skilled person can prepare the pharmaceutical composition and vaccine using conventional technique. For example, the particle provided in the first aspect of the present invention is mixed with buffer solution having physiological pH (e.g. pH 5-9, pH7) to prepare the pharmaceutical composition and vaccine provided in the third aspect of the present invention.
[0108] The pharmaceutical composition of the present invention may contain a single active ingredient or a combination of two or more active ingredients, as far as they are not contrary to the objects of the present invention. For example, cytokines including chemokines, anti-body of cytokines such as anti TNF antibody (e.g. infliximab, adalimumab), anti-VEGF antibody (e.g. bevacizumab and ranibizumab), cytokine receptor antagonist such as anti HER2 antibody (e.g. Trastuzumab), anti EGF receptor antibody (e.g. Cetuximab), anti VEGF aptamer (e.g. Pegaptanib) and immunomodulator such as cyclosporine, tacrolimus, ubenimex may be used for the combination therapy.
[0109] In a combination of plural active ingredients, their respective contents may be suitably increased or decreased in consideration of their therapeutic effects and safety.
[0110] The term "combination" used herein means two or more active ingredient are administered to a patient simultaneously in the form of a single entity or dosage, or are both administered to a patient as separate entities either simultaneously or sequentially with no specific time limits, wherein such administration provides therapeutically effective levels of the two components in the body, preferably at the same time.
[0111] In one embodiment, the composition is a vaccine composition including a DNA vaccine. In one embodiment, the DNA vaccine provided by the present invention comprises CpG containing oligonucleotide.
[0112] The composition or vaccine provided in the third aspect of the present invention can be administered one or more times. When the composition or vaccine provided in the third aspect of the present invention is administered more than one time, different particle provided in the first aspect of the present invention (e.g. CHIKV VLP or VEEV VLP) may be used for each of the administration. In one embodiment, combination of immunization using CHIKV VLP provided in the first aspect of the invention and immunization using VEEV VLP provided in the first aspect of the invention is employed. For example, CHIKV VLP provided in the first aspect of the present invention may be used for the 1st immunization and VEEV VLP provided in the first aspect of the present invention may be used for the 2nd immunization, or VEEV VLP provided in the first aspect of the present invention may be used for the 1st immunization and CHIKV VLP provided in the first aspect of the present invention may be used for the 2nd immunization.
[0113] A skilled person can determine timing of immunization using the composition or vaccine provided in the third aspect of the present invention. For example, 2nd immunization is performed 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 weeks after 1st immunization.
[0114] In one embodiment, the present invention provides a kit comprising
(a) a vaccine composition comprising the particle provided in the first aspect of the present invention; and (b) another vaccine composition comprising the particle provided in the first aspect of the present invention, wherein the particle contained in (a) is a virus like particle which is different from the particle contained in (b). In this embodiment, the particle contained in (a) may be Chikungunya virus like particle and the particle contained in (b) may be Venezuelan equine encephalitis virus like particle.
[0115] In one embodiment, the present invention provides a kit comprising
(a) a vaccine composition comprising the particle provided in the first aspect of the present invention; and (b) another vaccine composition comprising the particle provided in the first aspect of the present invention, (c) one or more vaccine composition, each of which comprises the particle provided in the first aspect of the present invention, wherein (a) is used for priming immunization and (b) and (c) are used for boosting immunization; and the particle contained in (a) is a virus like particle which is different from the particle contained in (b); and the particle contained in (c) is different from the particle contained in (a) and (b), or the same as the particle contained in (a) or (b).
[0116] The respective vaccine compositions contained in the above-described kit may be administered simultaneously, separately or sequentially.
[0117] The Alphavirus or Flavivirus virus like particle (e.g. Chikungunya virus or Venezuelan equine encephalitis virus) provided in the first aspect of the present invention or the nucleic acid molecule provided by the second aspect of the invention can be used for the composition and vaccine provided in the third aspect of the present invention.
[0118] For example, Chikungunya or Venezuelan equine encephalitis virus like particle comprising or consisting of:
one or more (e.g. 240) capsid of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); one or more (e.g. 240) E1 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV); and one or more (e.g. 240) E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV), wherein malaria antigen is inserted into E2 of Chikungunya virus (CHIKV) or Venezuelan equine encephalitis virus (VEEV) may be used for preparing the composition or vaccine provided in the third aspect of the present invention. The E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID No.50; the E1 may consist of an amino acid sequence represented by SEQ ID No.51; and the capsid may consist of an amino acid sequence represented by SEQ ID NO.: 52; or the E2 into which the antigen is inserted may consist of an amino acid sequence represented by SEQ ID NO.53; the E1 may consist of an amino acid sequence represented by SEQ ID NO.54; and the capsid may consist of an amino acid sequence represented by SEQ ID NO.: 55.
[0119] The composition or vaccine provided in the third aspect of the present invention can be administered to a mammal (e.g. human) intramuscularly (i.m.), intracutaneously (i.c.), subcutaneously (s.c.), intradermally (i.d.) or intraperitoneally (i.p.).
[0120] The composition or vaccine provided in the third aspect of the present invention may be used for treating or preventing malaria.
[0121] Thus, use of the Alphavirus or Flavivirus (e.g. Chikungunya virus or Venezuelan equine encephalitis virus) virus like particle provided in the first aspect of the present invention or the nucleic acid molecule provided by the second aspect of the invention for manufacturing a pharmaceutical composition or vaccine for treating or preventing malaria is also provided by the present invention.
(4) Method of Producing an Antibody, Method of Immunomodulation, Method of Treating Malaria, Method of Inducing and/or Enhancing Immune Response Against a Malaria Antigen in a Mammal, Method of Passive Immunization, Method of Presenting an Antigen on Macrophage, and Method for Producing a Particle
[0122] In the fourth aspect, the present invention provides a method of producing an antibody, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0123] The antibody produced in the fourth aspect of the present invention may be humanized using a conventional technique. Thus, in one embodiment, the method provided in the fourth aspect of the invention further comprises a step of humanizing non-human mammal produced antibody.
[0124] The particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention may be administered directly into the patient, into the affected organ or systemically, or applied ex vivo to cells derived from the patient or a human cell line which are subsequently administered to the patient, or used in vitro to select a subpopulation from immune cells such as B-cell and T-cell derived from the patient, which are then re-administered to the patient.
[0125] According to the present invention, the virus like particle can be applied for the immune therapy.
[0126] In the fifth aspect, the present invention provides a method of immunomodulation, a method of treating malaria, a method of inducing and/or enhancing immune response against a malaria antigen in a mammal comprising administering the composition provided in the third aspect of the present invention to a mammal.
[0127] In sixth aspect, the present invention provides a method of passive immunization against a malaria-causing pathogen, comprising administering the antibody provided in the fourth aspect of the present invention to a mammal.
[0128] In seventh aspect, the present invention provides a method of presenting a malaria antigen on macrophage, comprising contacting the particle provided in the first aspect of the present invention and/or the nucleic acid molecule provided in the second aspect of the present invention to a mammal.
[0129] In eighth aspect, the present invention provides a method for producing the particle provided in the first aspect of the present invention, comprising preparing a vector designed for expression of said particle; culturing a cell which is transfected with said vector to express said particle; and recovering said particle.
[0130] Examples of mammal include, but are not limited to, a human.
[0131] In one embodiment, the present invention provides a method of producing an antibody against malaria antigen, comprising contacting the Chikungunya or Venezuelan equine encephalitis virus like particle as described above and/or the nucleic acid molecule as described above to a mammal. The produced antibody may be an antibody which can specifically bind to a malaria antigen comprised in the Chikungunya or Venezuelan equine encephalitis virus like particle or a malaria antigen encoded by the nucleic acid molecule. The method of producing an antibody provided by the present invention may be a useful for producing a monoclonal or polyclonal antibody against a malaria antigen.
[0132] In one embodiment, an antibody against malaria antigen obtained by the method of producing an antibody according to the present invention is used for passive immunization. The method of passive immunization may comprise administering the obtained antibody to a mammal.
[0133] In one preferred embodiment, the immunomodulation provided by the present invention is inducing and/or enhancing immune response against malaria antigen in a mammal. Thus, in one embodiment, the present invention provides a method of inducing and/or enhancing immune response against malaria antigen in a mammal, comprising administering an effective amount of the composition as described above to the mammal.
[0134] Given the symptom of patients infected with Chikungunya or Venezuelan equine encephalitis together with unusual big molecule of Chikungunya or Venezuelan equine encephalitis, this VLP can act effectively and efficiently to target macrophage and its composition such as cytokines and immunomodulative compounds.
[0135] In one aspect, the present invention provides a method of presenting an antigen on macrophage, comprising administering the Chikungunya or Venezuelan equine encephalitis virus like particle as described above and/or the nucleic acid molecule as described above to a mammal. The Chikungunya or Venezuelan equine encephalitis virus like particle provided by the present invention is good to target macrophage. In one embodiment, the Chikungunya or Venezuelan equine encephalitis virus like particle provided by the present invention is a kind of delivery system of the at least one antigen, which is comprised in the Chikungunya or Venezuelan equine encephalitis virus like particle, to macrophage.
[0136] In one embodiment, the present invention provides a method for producing Chikungunya or Venezuelan equine encephalitis virus like particle provided in the first aspect of the present invention, comprising preparing a vector designed for expression of said particle; culturing a cell which is transfected with said vector to express said particle; and recovering said particle. In this embodiment, transfection can be conducted using a conventional method. Cells using for the transfection may be 293 cells. Recovering VLP may include collecting a conditioned medium after cells are transfected with a vector, and may further include purify VLP from the conditioned medium using ultracentrifugation.
[0137] The present invention will be described in detail with reference to the following example, which, however, is not intended to limit the scope of the present invention.
EXAMPLES
Example 1
Preparation of Chikungunya Virus (CHIKV) Like Particle Comprising a Virus Structural Polypeptide and a Fragment of Malaria Antigen
[0138] The following polynucleotides of malaria CSP1 proteins are used. N terminal linker is SGG and C terminal linker is GGS.
TABLE-US-00010 VLP74 (6 repeat of NPNA amino acid sequence) (SEQ ID No.: 46) Sggnpnanpnanpnanpnanpnanpnaggs (SEQ ID No.: 47) (Tccggaggaaacccgaatgccaatcccaacgcgaaccccaatgcta acccaaatgccaacccaaacgccaaccccaacgctggtggatcc) VLP78 (25 repeat of NPNA amino acid sequence) (SEQ ID No.: 48) Sggnpnanpnanpnanpnanpnanpnvdpnanpnanpnanpnanpna npnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpnanpn anpnanpnaggs (SEQ ID No.: 49) (tccggaggaaacccgaatgccaatcccaacgcgaaccccaacgcta accccaacgccaatccgaatgcaaacccgaacgttgacccaaacgcc aacccgaatgccaatcccaacgcgaaccccaatgctaacccaaatgc caacccaaacgccaaccccaacgctaatccaaacgccaaccctaacg ccaatcccaacgcgaatcctaacgctaatcccaacgcaaatcccaat gctaatccgaacgcgaaccctaatgcaaaccccaacgccaacccgaa cgctaacccgaacgctaatcccaacgccggtggatcc)
[0139] The respective polynucleotides was inserted between the codons encoding Ser at 531-position and Asn at 532-position of SEQ ID Nos.15 or 16 (SEQ ID Nos.1 or 2) to construct a plasmid (hereinafter referred to as CHIKV-VLP74 or 78) for expressing Chikungunya virus like particle where the modified VLP74 or 78-derived peptide is inserted into E2 of Chikungunya virus structural polypeptide.
[0140] 293F cells (Lifetechnology) were transfected with the plasmid using PEI (GE Healthcare) or GeneX (ATCC). 4 days after the transfection, the conditioned medium was collected and centrifuged at 3000 rpm for 15 minutes to separate it from cells. The supernatant was filtrated using 0.45 .mu.m filter to obtain virus like particles. The virus like particles were concentrated using TFF column and purified using QXL column (GE Healthcare) to obtain purified virus like particles. When animals were immunized with virus like particles, the purified virus like particles were further concentrated using spin column (Molecular Weight-cutoff: 100 kDa) to prepare the virus like particles for the immunization.
[0141] The expression of VLP comprising VLP74 or 78 conjugated with Chikungunya virus structural polypeptide was confirmed by Western Blot using an antibody specific for CHIKV (ATCC: VR-1241AF) and an antibody specific for VLP74 or 78.
Example 2
Preparation of Venezuelan Equine Encephalitis Virus (VEEV) Like Particle Comprising a Virus Structural Polypeptide and a Fragment of Malaria Antigen
[0142] The same polynucleotides of malaria CSP1 proteins (VLP74 and VLP78) used in EXAMPLE 1 are used. N terminal linker is SGG and C terminal linker is GGS.
[0143] The respective polynucleotides was inserted between the codons encoding Ser at 518-position and Ser at 519-position of SEQ ID Nos.19 or 20 (SEQ ID No.3) to construct a plasmid (hereinafter referred to as VEEV-VLP74 or 78) for expressing Venezuelan equine encephalitis virus like particle where the modified VLP74 or 78-derived peptide is inserted into E2 of Venezuelan equine encephalitis virus structural polypeptide.
[0144] 293F cells (Lifetechnology) were transfected with the plasmid using PEI (GE Healthcare) or GeneX (ATCC). 4 days after the transfection, the conditioned medium was collected and centrifuged at 3000 rpm for 15 minutes to separate it from cells. The supernatant was filtrated using 0.45 .mu.m filter to obtain virus like particles. The virus like particles were concentrated using TFF column and purified using QXL column (GE Healthcare) to obtain purified virus like particles. When animals were immunized with virus like particles, the purified virus like particles were further concentrated using spin column (Molecular Weight-cutoff: 100 kDa) to prepare the virus like particles for the immunization.
[0145] The expression of VLP comprising VLP 74 or 78 conjugated with Venezuelan equine encephalitis virus structural polypeptide was confirmed by Western Blot using an antibody specific for VEEV and an antibody specific for VLP74 or 78.
Example 3
Immunogenicity in Non-Human Primate (Monkey)
[0146] The monkeys were immunized with .times.25-CHI (80 ug) at 0 week and .times.6-VEE (80 ug) at 3 week by intramuscular injection with or without adjuvant (Sigma Adjuvant System, Sigma, S6322). .times.25-CHI means 25 times malaria CSP repeat amino acid NPNA on CHIKV VLP particle (VLP78_15). .times.6-VEE means 6 times malaria CSP repeat amino acid NPNA on VEEV VLP particle (VLP74_25). The blood is taken at 2 and 5 weeks after the first immunization.
[0147] 96 well ELISA plate were coated with 50 ng of Recombinant Circumsporozoite Protein (rCSP) (Reagent Proteins, ATG-422) in 100 ul PBS buffer pre well. The Plates after 2 hours incubation were washed three times TBS buffer containing 0.05% Tween-20 and blocked with TBS buffer containing 0.05% Tween-20 and 5% dry milk. The heat inactivated diluted serum from monkeys were added in the blocking buffer and incubated for 1 h at room temperature. After washing three times, peroxidase labeled goat anti-human IgG or anti-mouse IgG was added at 1:4000 dilution and incubated for 1 h at room temperature. After washing three times, Peroxidase substrate was added for development and incubated for 10 mins and 2N H2SO4 was added to stop the development. The data were analyzed using Gen5 (BioTek) and GraphPad Prism6 (GraphPad software Inc).
[0148] The Immunogenicities are shown in FIGS. 4 to 6.
[0149] Induction of antibodies against CSP was found in the serum of all monkeys immunized with Malaria VLPs (see FIG. 4). The mean OD values indicating titer of antibodies against CSP is shown in FIG. 5. FIG. 5 shows that the serum from immunized monkeys induced high titer of antibodies against CSP.
[0150] As seen in FIG. 6, higher titer of antibodies against CSP was achieved when CHIKV VLP particle comprising NPNA and VEEV VLP particle comprising NPNA were used for the priming immunization and boosting immunization, respectively, compared to when only CHIKV VLP particle comprising NPNA was used for both of the priming immunization and the boosting immunization. In addition, FIG. 6 shows that use of adjuvant further enhanced the titer of antibodies against CSP. Further, FIG. 6 shows that administration of 25-repeats of NPNA induces higher titer of antibodies against CSP compared to administration of 6-repeats of NPNA.
[0151] The anti-Pf CSP antibody titer in the serum from the monkeys immunized with .times.25-CHI (80 ug) at 0 week and .times.6-VEE (80 ug) at 3 week without using adjuvant was measured by ELISA at Malaria Serology Lab Malaria Vaccine Branch, WRAIR. In the ELISA performed at Malaria Serology Lab Malaria Vaccine Branch, WRAIR, the plates were coated with CSPrp ((NPNA)6 Peptide) [0.2 .mu.g/.mu.L] (Supplier: Eurogentec EP070034) and Goat .alpha.-Human IgG (KPL/074-1002 LOT#120714) was used as 2nd antibody. The final titer was determined by the dilution factor that yields an OD of 1.0 (414 nm).
[0152] As a result, the anti-Pf CSP antibody titer in the serum from the monkeys was enhanced after 2nd immunization compared to 1st immunization (see Table 2). Compared to the anti-Pf CSP antibody titer in the serum from the monkeys immunized with RTS,S (GlaxoSmithKline), the anti-Pf CSP antibody titer in the serum from the monkeys immunized with .times.25-CHI (80 ug) and .times.6-VEE (80 ug) in the absence of adjuvant was considered to be higher even though RTS,S (GlaxoSmithKline) contains adjuvant.
TABLE-US-00011 TABLE 2 After 1st After 2nd immunization immunization Animal No. Week 2 Week 5 1 8990 29420 2 48210 44100 3 80400 51230 4 16260 19640 Geometric mean 27359 33801
Example 4
Immunogenicity in Mouse
[0153] The mice immunized with 10 ug of VLP78_15 at week 0, 10 ug of VLP74_25 at week 3 and 10 ug of VLP78_15 at week 6 with or without adjuvant (Sigma Adjuvant System, Sigma, S6322) by intramuscular injection.
[0154] The anti-Pf CSP antibody titer in the serum from the immunized mice were measured by ELISA at Malaria Serology Lab Malaria Vaccine Branch, WRAIR, where plates were coated with CSPrp ((NPNA)6 Peptide) [0.2 .mu.g/.mu.L] (Supplier: Eurogentec EP070034) and Goat .alpha.-Mouse IgG (KPL/074-1806 LOT#100737) is used as 2nd antibody to detect the antibodies in the serum.
[0155] The final titer was determined by the dilution factor that yields an OD of 1.0 (414 nm).
[0156] The Immunogenicity are shown in Tables 3 and 4.
[0157] Tables 3 and 4 show that higher titer of antibodies against CSP was achieved after immunizing virus like particle three times. In addition, Tables 3 and 4 show that use of adjuvant enhanced the titer of antibodies against CSP.
TABLE-US-00012 TABLE 3 Mouse Week 3 (after 1.sup.st immunization) Mouse No. VLP VLP + Adjuvant 1 6070 QNS 2 5850 13680 3 9610 7610 4 5440 23370 5 16320 27390 Geometric Mean 7875 16066 QNS = Quantity not sufficient to test
TABLE-US-00013 TABLE 4 Mouse Week 9 (after 1st immunization) Mouse No. VLP VLP + Adjuvant 1 35510 729000 2 15040 197800 3 41650 106700 4 37250 436000 5 48200 497600 Geometric Mean 33134 319666
Example 5
Immunogenicity of P. yoelii CSP Inserted VLP in Mice
[0158] QGPGAP seen in the rodent malaria CSP (P.yoelii CSP) was used as an antigen. 6.times. QGPGAP was inserted into CHIKV VLP. The mice were immunized with the CHIKV VLP 2 times at 0 and 8 week (20 ug VLP per mouse) by intramuscle injection with or without Adjuvant Ribi.
[0159] Immunogenicity was confirmed at 4, 6, 10 and 14 weeks after the first immunization. The anti-P. yoelii
[0160] CSP antibody were measured by ELISA. The ELISA was performed in the same way as ELISA described in Example 3 except that the plates were coated with P. Yoelii CSP repeat sequence peptide at 0.1 ng/.mu.l. The secondary antibody was anti-mouse IgG HRP (Cell signal, #7076S). The results are shown in FIGS. 7-9.
[0161] FIGS. 7-9 show that higher titer of antibodies against CSP was achieved by intramuscler administration of CHIKV VLP comprising 6.times. QGPGAP. In addition, FIGS. 7-9 show that use of adjuvant enhanced the titer of antibodies against CSP.
Example 6
Protection of Mice Against Malaria by Intramuscle Injection of CHIKV VLP Comprising P. yoelii CSP Epitope: 6.times. QGPGAP
[0162] 6.times. QGPGAP was inserted into CHIKV VLP. The mice (n=5) were immunized with the CHIKV VLP 2 times at 0 and 8 week (20 ug VLP per mouse) by intramuscle injection with or without Adjuvant Ribi (see FIG. 10). Rodent malaria: P. yoelii-challenge (i.v.) was conducted at 17 weeks (see FIG. 10).
[0163] Malaria infection was confirmed by PCR. Genomic DNA was purified from the mice blood day 6 after challenge. 18S malaria DNA was amplified by PCR. FIG. 11 shows results of the PCR, indicating that all of 5 control mice (PBS injection) were infected with malaria; all of 5 mice immunized with Control VLP were infected with malaria; among 5 mice immunized with CHIKV VLP comprising 6.times. QGPGAP, 2 mice were infected with malaria and 3 mice were not infected with malaria; and among 5 mice immunized with CHIKV VLP comprising 6.times. QGPGAP with adjuvant: Ribi, 1 mouse was infected with malaria and 4 mice were not infected with malaria.
Example 7
Preparation of Vaccine Composition Comprising Chikungunya Virus (CHIKV) Like Particle Comprising NPNA Repeat or Venezuelan Equine Encephalitis Virus (VEEV) Like Particle Comprising NPNA Repeat
[0164] Chikungunya virus (CHIKV) like particle comprising 6.times. or 25.times. NPNA was prepared according to Example 1, and Venezuelan equine encephalitis virus (VEEV) like particle comprising 6.times. NPNA was prepared according to Example 2. To prepare a vaccine composition, 80 .mu.g of each of the prepared particles was mixed with 1 ml of Sucrose Phosphate Solution, pH 7.2, Endotoxin Free (Teknova, SP buffer).
Sequence CWU
1
1
5611248PRTChikungunya virus 1Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn
Arg Arg Tyr Gln Pro 1 5 10
15 Arg Pro Trp Thr Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro
20 25 30 Arg Pro
Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val 35
40 45 Asn Lys Leu Thr Met Arg Ala
Val Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60 Arg Lys Asn Lys Lys Gln Lys Gln Lys Gln Gln Ala
Pro Gln Asn Asn 65 70 75
80 Thr Asn Gln Lys Lys Gln Pro Pro Lys Lys Lys Pro Ala Gln Lys Lys
85 90 95 Lys Lys Pro
Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp 100
105 110 Cys Ile Phe Glu Val Lys His Glu
Gly Lys Val Thr Gly Tyr Ala Cys 115 120
125 Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys
Gly Thr Ile 130 135 140
Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr 145
150 155 160 Asp Leu Glu Cys
Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser 165
170 175 Lys Phe Thr His Glu Lys Pro Glu Gly
Tyr Tyr Asn Trp His His Gly 180 185
190 Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly
Ala Gly 195 200 205
Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220 Val Ala Ile Val Leu
Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225 230
235 240 Ser Val Val Thr Trp Asn Lys Asp Ile Val
Thr Lys Ile Thr Pro Glu 245 250
255 Gly Ala Glu Glu Trp Ser Leu Ala Ile Pro Val Met Cys Leu Leu
Ala 260 265 270 Asn
Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys Tyr 275
280 285 Glu Lys Glu Pro Glu Glu
Thr Leu Arg Met Leu Glu Asp Asn Val Met 290 295
300 Arg Pro Gly Tyr Tyr Gln Leu Leu Gln Ala Ser
Leu Thr Cys Ser Pro 305 310 315
320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala
325 330 335 Thr Arg
Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350 Cys His Ser Pro Val Ala Leu
Glu Arg Ile Arg Asn Glu Ala Thr Asp 355 360
365 Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly
Ile Lys Thr Asp 370 375 380
Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp Asn His Met Pro 385
390 395 400 Ala Asp Ala
Glu Arg Ala Gly Leu Phe Val Arg Thr Ser Ala Pro Cys 405
410 415 Thr Ile Thr Gly Thr Met Gly His
Phe Ile Leu Ala Arg Cys Pro Lys 420 425
430 Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys
Ile Ser His 435 440 445
Ser Cys Thr His Pro Phe His His Asp Pro Pro Val Ile Gly Arg Glu 450
455 460 Lys Phe His Ser
Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465 470
475 480 Tyr Val Gln Ser Thr Ala Ala Thr Thr
Glu Glu Ile Glu Val His Met 485 490
495 Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Ser Gln Gln Ser
Gly Asn 500 505 510
Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys Asn Cys
515 520 525 Gly Gly Ser Asn
Glu Gly Leu Thr Thr Thr Asp Lys Val Ile Asn Asn 530
535 540 Cys Lys Val Asp Gln Cys His Ala
Ala Val Thr Asn His Lys Lys Trp 545 550
555 560 Gln Tyr Asn Ser Pro Leu Val Pro Arg Asn Ala Glu
Leu Gly Asp Arg 565 570
575 Lys Gly Lys Ile His Ile Pro Phe Pro Leu Ala Asn Val Thr Cys Arg
580 585 590 Val Pro Lys
Ala Arg Asn Pro Thr Val Thr Tyr Gly Lys Asn Gln Val 595
600 605 Ile Met Leu Leu Tyr Pro Asp His
Pro Thr Leu Leu Ser Tyr Arg Asn 610 615
620 Met Gly Glu Glu Pro Asn Tyr Gln Glu Glu Trp Val Met
His Lys Lys 625 630 635
640 Glu Val Val Leu Thr Val Pro Thr Glu Gly Leu Glu Val Thr Trp Gly
645 650 655 Asn Asn Glu Pro
Tyr Lys Tyr Trp Pro Gln Leu Ser Thr Asn Gly Thr 660
665 670 Ala His Gly His Pro His Glu Ile Ile
Leu Tyr Tyr Tyr Glu Leu Tyr 675 680
685 Pro Thr Met Thr Val Val Val Val Ser Val Ala Thr Phe Ile
Leu Leu 690 695 700
Ser Met Val Gly Met Ala Ala Gly Met Cys Met Cys Ala Arg Arg Arg 705
710 715 720 Cys Ile Thr Pro Tyr
Glu Leu Thr Pro Gly Ala Thr Val Pro Phe Leu 725
730 735 Leu Ser Leu Ile Cys Cys Ile Arg Thr Ala
Lys Ala Ala Thr Tyr Gln 740 745
750 Glu Ala Ala Ile Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp
Leu 755 760 765 Gln
Ala Leu Ile Pro Leu Ala Ala Leu Ile Val Leu Cys Asn Cys Leu 770
775 780 Arg Leu Leu Pro Cys Cys
Cys Lys Thr Leu Ala Phe Leu Ala Val Met 785 790
795 800 Ser Val Gly Ala His Thr Val Ser Ala Tyr Glu
His Val Thr Val Ile 805 810
815 Pro Asn Thr Val Gly Val Pro Tyr Lys Thr Leu Val Asn Arg Pro Gly
820 825 830 Tyr Ser
Pro Met Val Leu Glu Met Glu Leu Leu Ser Val Thr Leu Glu 835
840 845 Pro Thr Leu Ser Leu Asp Tyr
Ile Thr Cys Glu Tyr Lys Thr Val Ile 850 855
860 Pro Ser Pro Tyr Val Lys Cys Cys Gly Thr Ala Glu
Cys Lys Asp Lys 865 870 875
880 Asn Leu Pro Asp Tyr Ser Cys Lys Val Phe Thr Gly Val Tyr Pro Phe
885 890 895 Met Trp Gly
Gly Ala Tyr Cys Phe Cys Asp Ala Glu Asn Thr Gln Leu 900
905 910 Ser Glu Ala His Val Glu Lys Ser
Glu Ser Cys Lys Thr Glu Phe Ala 915 920
925 Ser Ala Tyr Arg Ala His Thr Ala Ser Ala Ser Ala Lys
Leu Arg Val 930 935 940
Leu Tyr Gln Gly Asn Asn Ile Thr Val Thr Ala Tyr Ala Asn Gly Asp 945
950 955 960 His Ala Val Thr
Val Lys Asp Ala Lys Phe Ile Val Gly Pro Met Ser 965
970 975 Ser Ala Trp Thr Pro Phe Asp Asn Lys
Ile Val Val Tyr Lys Gly Asp 980 985
990 Val Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg
Pro Gly Gln 995 1000 1005
Phe Gly Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr
1010 1015 1020 Ala Asn Thr
Gln Leu Val Leu Gln Arg Pro Ala Val Gly Thr Val 1025
1030 1035 His Val Pro Tyr Ser Gln Ala Pro
Ser Gly Phe Lys Tyr Trp Leu 1040 1045
1050 Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe
Gly Cys 1055 1060 1065
Gln Ile Ala Thr Asn Pro Val Arg Ala Val Asn Cys Ala Val Gly 1070
1075 1080 Asn Met Pro Ile Ser
Ile Asp Ile Pro Glu Ala Ala Phe Thr Arg 1085 1090
1095 Val Val Asp Ala Pro Ser Leu Thr Asp Met
Ser Cys Glu Val Pro 1100 1105 1110
Ala Cys Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys
1115 1120 1125 Tyr Ala
Ala Ser Lys Lys Gly Lys Cys Ala Val His Ser Met Thr 1130
1135 1140 Asn Ala Val Thr Ile Arg Glu
Ala Glu Ile Glu Val Glu Gly Asn 1145 1150
1155 Ser Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala
Ser Ala Glu 1160 1165 1170
Phe Arg Val Gln Val Cys Ser Thr Gln Val His Cys Ala Ala Glu 1175
1180 1185 Cys His Pro Pro Lys
Asp His Ile Val Asn Tyr Pro Ala Ser His 1190 1195
1200 Thr Thr Leu Gly Val Gln Asp Ile Ser Ala
Thr Ala Met Ser Trp 1205 1210 1215
Val Gln Lys Ile Thr Gly Gly Val Gly Leu Val Val Ala Val Ala
1220 1225 1230 Ala Leu
Ile Leu Ile Val Val Leu Cys Val Ser Phe Ser Arg His 1235
1240 1245 21248PRTChikungunya virus 2Met
Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro 1
5 10 15 Arg Pro Trp Ala Pro Arg
Pro Thr Ile Gln Val Ile Arg Pro Arg Pro 20
25 30 Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala
Gln Leu Ile Ser Ala Val 35 40
45 Asn Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg
Arg Asn 50 55 60
Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp 65
70 75 80 Pro Lys Gln Lys Lys
Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys 85
90 95 Lys Lys Pro Gly Arg Arg Glu Arg Met Cys
Met Lys Ile Glu Asn Asp 100 105
110 Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala
Cys 115 120 125 Leu
Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 130
135 140 Asp Asn Ala Asp Leu Ala
Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr 145 150
155 160 Asp Leu Glu Cys Ala Gln Ile Pro Val His Met
Lys Ser Asp Ala Ser 165 170
175 Lys Phe Thr His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly
180 185 190 Ala Val
Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly 195
200 205 Lys Pro Gly Asp Ser Gly Arg
Pro Ile Phe Asp Asn Lys Gly Arg Val 210 215
220 Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala
Arg Thr Ala Leu 225 230 235
240 Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255 Gly Ala Glu
Glu Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270 Asn Thr Thr Phe Pro Cys Ser Gln
Pro Pro Cys Thr Pro Cys Cys Tyr 275 280
285 Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp
Asn Val Met 290 295 300
Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305
310 315 320 His Arg Gln Arg
Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala 325
330 335 Thr Arg Pro Tyr Leu Ala His Cys Pro
Asp Cys Gly Glu Gly His Ser 340 345
350 Cys His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala
Thr Asp 355 360 365
Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380 Asp Ser His Asp Trp
Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro 385 390
395 400 Ala Asp Ala Glu Arg Ala Gly Leu Leu Val
Arg Thr Ser Ala Pro Cys 405 410
415 Thr Ile Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro
Lys 420 425 430 Gly
Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys Ile Ser His 435
440 445 Thr Cys Thr His Pro Phe
His His Glu Pro Pro Val Ile Gly Arg Glu 450 455
460 Arg Phe His Ser Arg Pro Gln His Gly Lys Glu
Leu Pro Cys Ser Thr 465 470 475
480 Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met
485 490 495 Pro Pro
Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn 500
505 510 Val Lys Ile Thr Val Asn Gly
Gln Thr Val Arg Tyr Lys Cys Asn Cys 515 520
525 Gly Gly Ser Asn Glu Gly Leu Thr Thr Thr Asp Lys
Val Ile Asn Asn 530 535 540
Cys Lys Ile Asp Gln Cys His Ala Ala Val Thr Asn His Lys Asn Trp 545
550 555 560 Gln Tyr Asn
Ser Pro Leu Val Pro Arg Asn Ala Glu Leu Gly Asp Arg 565
570 575 Lys Gly Lys Ile His Ile Pro Phe
Pro Leu Ala Asn Val Thr Cys Arg 580 585
590 Val Pro Lys Ala Arg Asn Pro Thr Val Thr Tyr Gly Lys
Asn Gln Val 595 600 605
Thr Met Leu Leu Tyr Pro Asp His Pro Thr Leu Leu Ser Tyr Arg Asn 610
615 620 Met Gly Gln Glu
Pro Asn Tyr His Glu Glu Trp Val Thr His Lys Lys 625 630
635 640 Glu Val Thr Leu Thr Val Pro Thr Glu
Gly Leu Glu Val Thr Trp Gly 645 650
655 Asn Asn Glu Pro Tyr Lys Tyr Trp Pro Gln Met Ser Thr Asn
Gly Thr 660 665 670
Ala His Gly His Pro His Glu Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr
675 680 685 Pro Thr Met Thr
Val Val Ile Val Ser Val Ala Ser Phe Val Leu Leu 690
695 700 Ser Met Val Gly Thr Ala Val Gly
Met Cys Val Cys Ala Arg Arg Arg 705 710
715 720 Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly Ala Thr
Val Pro Phe Leu 725 730
735 Leu Ser Leu Leu Cys Cys Val Arg Thr Thr Lys Ala Ala Thr Tyr Tyr
740 745 750 Glu Ala Ala
Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp Leu 755
760 765 Gln Ala Leu Ile Pro Leu Ala Ala
Leu Ile Val Leu Cys Asn Cys Leu 770 775
780 Lys Leu Leu Pro Cys Cys Cys Lys Thr Leu Ala Phe Leu
Ala Val Met 785 790 795
800 Ser Ile Gly Ala His Thr Val Ser Ala Tyr Glu His Val Thr Val Ile
805 810 815 Pro Asn Thr Val
Gly Val Pro Tyr Lys Thr Leu Val Asn Arg Pro Gly 820
825 830 Tyr Ser Pro Met Val Leu Glu Met Glu
Leu Gln Ser Val Thr Leu Glu 835 840
845 Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys Glu Tyr Lys Thr
Val Ile 850 855 860
Pro Ser Pro Tyr Val Lys Cys Cys Gly Thr Ala Glu Cys Lys Asp Lys 865
870 875 880 Ser Leu Pro Asp Tyr
Ser Cys Lys Val Phe Thr Gly Val Tyr Pro Phe 885
890 895 Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp
Ala Glu Asn Thr Gln Leu 900 905
910 Ser Glu Ala His Val Glu Lys Ser Glu Ser Cys Lys Thr Glu Phe
Ala 915 920 925 Ser
Ala Tyr Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val 930
935 940 Leu Tyr Gln Gly Asn Asn
Ile Thr Val Ala Ala Tyr Ala Asn Gly Asp 945 950
955 960 His Ala Val Thr Val Lys Asp Ala Lys Phe Val
Val Gly Pro Met Ser 965 970
975 Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys Gly Asp
980 985 990 Val Tyr
Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg Pro Gly Gln 995
1000 1005 Phe Gly Asp Ile Gln
Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr 1010 1015
1020 Ala Asn Thr Gln Leu Val Leu Gln Arg Pro
Ala Ala Gly Thr Val 1025 1030 1035
His Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp Leu
1040 1045 1050 Lys Glu
Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe Gly Cys 1055
1060 1065 Gln Ile Ala Thr Asn Pro Val
Arg Ala Val Asn Cys Ala Val Gly 1070 1075
1080 Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala Ala
Phe Thr Arg 1085 1090 1095
Val Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu Val Pro 1100
1105 1110 Ala Cys Thr His Ser
Ser Asp Phe Gly Gly Val Ala Ile Ile Lys 1115 1120
1125 Tyr Thr Ala Ser Lys Lys Gly Lys Cys Ala
Val His Ser Met Thr 1130 1135 1140
Asn Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn
1145 1150 1155 Ser Gln
Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu 1160
1165 1170 Phe Arg Val Gln Val Cys Ser
Thr Gln Val His Cys Ala Ala Ala 1175 1180
1185 Cys His Pro Pro Lys Asp His Ile Val Asn Tyr Pro
Ala Ser His 1190 1195 1200
Thr Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser Trp 1205
1210 1215 Val Gln Lys Ile Thr
Gly Gly Val Gly Leu Ile Val Ala Val Ala 1220 1225
1230 Ala Leu Ile Leu Ile Val Val Leu Cys Val
Ser Phe Ser Arg His 1235 1240 1245
31255PRTVenesuelan equine encephalitis virus 3Met Phe Pro Phe
Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg 1 5
10 15 Asn Pro Phe Ala Ala Pro Arg Arg Pro
Trp Phe Pro Arg Thr Asp Pro 20 25
30 Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala
Asn Leu 35 40 45
Thr Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Ala 50
55 60 Lys Pro Lys Lys Glu
Ala Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly 65 70
75 80 Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys
Ala Lys Thr Gly Pro Pro 85 90
95 Asn Pro Lys Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys
Pro 100 105 110 Gly
Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys Thr Phe 115
120 125 Pro Ile Met Leu Glu Gly
Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130 135
140 Gly Lys Leu Phe Arg Pro Met His Val Glu Gly
Lys Ile Asp Asn Asp 145 150 155
160 Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175 Tyr Ala
Asp Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr 180
185 190 His Glu Lys Pro Gln Gly Tyr
Tyr Ser Trp His His Gly Ala Val Gln 195 200
205 Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val
Gly Ala Lys Gly 210 215 220
Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile 225
230 235 240 Val Leu Gly
Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val 245
250 255 Met Trp Asn Glu Lys Gly Val Thr
Val Lys Tyr Thr Pro Glu Asn Cys 260 265
270 Glu Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala
Asn Val Thr 275 280 285
Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290
295 300 Thr Leu Ala Met
Leu Ser Val Asn Val Asp Asn Pro Gly Tyr Asp Glu 305 310
315 320 Leu Leu Glu Ala Ala Val Lys Cys Pro
Gly Arg Lys Arg Arg Ser Thr 325 330
335 Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met
Ala Arg 340 345 350
Cys Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile Ala Ile Glu
355 360 365 Ala Val Lys Ser
Asp Gly His Asp Gly Tyr Val Arg Leu Gln Thr Ser 370
375 380 Ser Gln Tyr Gly Leu Asp Ser Ser
Gly Asn Leu Lys Gly Arg Thr Met 385 390
395 400 Arg Tyr Asp Met His Gly Thr Ile Lys Glu Ile Pro
Leu His Gln Val 405 410
415 Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp Gly His Gly Tyr
420 425 430 Phe Leu Leu
Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe 435
440 445 Lys Lys Asp Ser Val Arg His Ser
Cys Ser Val Pro Tyr Glu Val Lys 450 455
460 Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His Pro Pro
Glu His Gly 465 470 475
480 Val Glu Gln Ala Cys Gln Val Tyr Ala His Asp Ala Gln Asn Arg Gly
485 490 495 Ala Tyr Val Glu
Met His Leu Pro Gly Ser Glu Val Asp Ser Ser Leu 500
505 510 Val Ser Leu Ser Gly Ser Ser Val Thr
Val Thr Pro Pro Asp Gly Thr 515 520
525 Ser Ala Leu Val Glu Cys Glu Cys Gly Gly Thr Lys Ile Ser
Glu Thr 530 535 540
Ile Asn Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys 545
550 555 560 Arg Ala Tyr Arg Leu
Gln Asn Asp Lys Trp Val Tyr Asn Ser Asp Lys 565
570 575 Leu Pro Lys Ala Ala Gly Ala Thr Leu Lys
Gly Lys Leu His Val Pro 580 585
590 Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu Ala Pro Glu
Pro 595 600 605 Met
Ile Thr Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys 610
615 620 Asn Pro Thr Tyr Leu Ile
Thr Arg Gln Leu Ala Asp Glu Pro His Tyr 625 630
635 640 Thr His Glu Leu Ile Ser Glu Pro Ala Val Arg
Asn Phe Thr Val Thr 645 650
655 Glu Lys Gly Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys Arg Phe
660 665 670 Trp Ala
Gln Glu Thr Ala Pro Gly Asn Pro His Gly Leu Pro His Glu 675
680 685 Val Ile Thr His Tyr Tyr His
Arg Tyr Pro Met Ser Thr Ile Leu Gly 690 695
700 Leu Ser Ile Cys Ala Ala Ile Ala Thr Val Ser Val
Ala Ala Ser Thr 705 710 715
720 Trp Leu Phe Cys Arg Ser Arg Val Ala Cys Leu Thr Pro Tyr Arg Leu
725 730 735 Thr Pro Asn
Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala 740
745 750 Arg Thr Ala Arg Ala Glu Thr Thr
Trp Glu Ser Leu Asp His Leu Trp 755 760
765 Asn Asn Asn Gln Gln Met Phe Trp Ile Gln Leu Leu Ile
Pro Leu Ala 770 775 780
Ala Leu Ile Val Val Thr Arg Leu Leu Arg Cys Val Cys Cys Val Val 785
790 795 800 Pro Phe Leu Val
Met Ala Gly Ala Ala Gly Ala Gly Ala Tyr Glu His 805
810 815 Ala Thr Thr Met Pro Ser Gln Ala Gly
Ile Ser Tyr Asn Thr Ile Val 820 825
830 Asn Arg Ala Gly Tyr Ala Pro Leu Pro Ile Ser Ile Thr Pro
Thr Lys 835 840 845
Ile Lys Leu Ile Pro Thr Val Asn Leu Glu Tyr Val Thr Cys His Tyr 850
855 860 Lys Thr Gly Met Asp
Ser Pro Ala Ile Lys Cys Cys Gly Ser Gln Glu 865 870
875 880 Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln
Cys Lys Val Phe Thr Gly 885 890
895 Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp Thr
Glu 900 905 910 Asn
Thr Gln Val Ser Lys Ala Tyr Val Met Lys Ser Asp Asp Cys Leu 915
920 925 Ala Asp His Ala Glu Ala
Tyr Lys Ala His Thr Ala Ser Val Gln Ala 930 935
940 Phe Leu Asn Ile Thr Val Gly Glu His Ser Ile
Val Thr Thr Val Tyr 945 950 955
960 Val Asn Gly Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr Ala
965 970 975 Gly Pro
Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg Lys Ile Val Gln 980
985 990 Tyr Ala Gly Glu Ile Tyr Asn
Tyr Asp Phe Pro Glu Tyr Gly Ala Gly 995 1000
1005 Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser
Arg Thr Val Ser Ser 1010 1015 1020
Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg Pro Lys
1025 1030 1035 Ala Gly
Ala Ile His Val Pro Tyr Thr Gln Ala Pro Ser Gly Phe 1040
1045 1050 Glu Gln Trp Lys Lys Asp Lys
Ala Pro Ser Leu Lys Phe Thr Ala 1055 1060
1065 Pro Phe Gly Cys Glu Ile Tyr Thr Asn Pro Ile Arg
Ala Glu Asn 1070 1075 1080
Cys Ala Val Gly Ser Ile Pro Leu Ala Phe Asp Ile Pro Asp Ala 1085
1090 1095 Leu Phe Thr Arg Val
Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu 1100 1105
1110 Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser
Asp Phe Gly Gly Ile 1115 1120 1125
Ala Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly Lys Cys Ala Val
1130 1135 1140 His Val
Pro Ser Gly Thr Ala Thr Leu Lys Glu Ala Ala Val Glu 1145
1150 1155 Leu Thr Glu Gln Gly Ser Ala
Thr Ile His Phe Ser Thr Ala Asn 1160 1165
1170 Ile His Pro Glu Phe Arg Leu Gln Ile Cys Thr Ser
Tyr Val Thr 1175 1180 1185
Cys Lys Gly Asp Cys His Pro Pro Lys Asp His Ile Val Thr His 1190
1195 1200 Pro Gln Tyr His Ala
Gln Thr Phe Thr Ala Ala Val Ser Lys Thr 1205 1210
1215 Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly
Gly Ser Ala Val Ile 1220 1225 1230
Ile Ile Ile Gly Leu Val Leu Ala Thr Ile Val Ala Met Tyr Val
1235 1240 1245 Leu Thr
Asn Gln Lys His Asn 1250 1255 42964DNAChikungunya
virus 4atgagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
60ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
120gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
180caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
240ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
300cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
360ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
420gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
480accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
540acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
600ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
660tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
720cctgaccgca cgctgatgac gcagcagtct ggcaacgtga agatcacagt taatgggcag
780acggtgcggt acaagtgcaa ctgcggtggc tcaaacgagg gactgacaac cacagacaaa
840gtgatcaata actgcaaaat tgatcagtgc catgctgcag tcactaatca caagaattgg
900caatacaact cccctttagt cccgcgcaac gctgaactcg gggaccgtaa aggaaagatc
960cacatcccat tcccattggc aaacgtgact tgcagagtgc caaaagcaag aaaccctaca
1020gtaacttacg gaaaaaacca agtcaccatg ctgctgtatc ctgaccatcc gacactcttg
1080tcttaccgta acatgggaca ggaaccaaat taccacgagg agtgggtgac acacaagaag
1140gaggttacct tgaccgtgcc tactgagggt ctggaggtca cttggggcaa caacgaacca
1200tacaagtact ggccgcagat gtctacgaac ggtactgctc atggtcaccc acatgagata
1260atcttgtact attatgagct gtaccccact atgactgtag tcattgtgtc ggtggcctcg
1320ttcgtgcttc tgtcgatggt gggcacagca gtgggaatgt gtgtgtgcgc acggcgcaga
1380tgcattacac catatgaatt aacaccagga gccactgttc ccttcctgct cagcctgcta
1440tgctgcgtca gaacgaccaa ggcggccaca tattacgagg ctgcggcata tctatggaac
1500gaacagcagc ccctgttctg gttgcaggct cttatcccgc tggccgcctt gatcgtcctg
1560tgcaactgtc tgaaactctt gccatgctgc tgtaagaccc tggctttttt agccgtaatg
1620agcatcggtg cccacactgt gagcgcgtac gaacacgtaa cagtgatccc gaacacggtg
1680ggagtaccgt ataagactct tgtcaacaga ccgggttaca gccccatggt gttggagatg
1740gagctacaat cagtcacctt ggaaccaaca ctgtcacttg actacatcac gtgcgagtac
1800aaaactgtca tcccctcccc gtacgtgaag tgctgtggta cagcagagtg caaggacaag
1860agcctaccag actacagctg caaggtcttt actggagtct acccatttat gtggggcggc
1920gcctactgct tttgcgacgc cgaaaatacg caattgagcg aggcacatgt agagaaatct
1980gaatcttgca aaacagagtt tgcatcggcc tacagagccc acaccgcatc ggcgtcggcg
2040aagctccgcg tcctttacca aggaaacaac attaccgtag ctgcctacgc taacggtgac
2100catgccgtca cagtaaagga cgccaagttt gtcgtgggcc caatgtcctc cgcctggaca
2160ccttttgaca acaaaatcgt ggtgtacaaa ggcgacgtct acaacatgga ctacccacct
2220tttggcgcag gaagaccagg acaatttggt gacattcaaa gtcgtacacc ggaaagtaaa
2280gacgtttatg ccaacactca gttggtacta cagaggccag cagcaggcac ggtacatgta
2340ccatactctc aggcaccatc tggcttcaag tattggctga aggaacgagg agcatcgcta
2400cagcacacgg caccgttcgg ttgccagatt gcgacaaacc cggtaagagc tgtaaattgc
2460gctgtgggga acataccaat ttccatcgac ataccggatg cggcctttac tagggttgtc
2520gatgcaccct ctgtaacgga catgtcatgc gaagtaccag cctgcactca ctcctccgac
2580tttgggggcg tcgccatcat caaatacaca gctagcaaga aaggtaaatg tgcagtacat
2640tcgatgacca acgccgttac cattcgagaa gccgacgtag aagtagaggg gaactcccag
2700ctgcaaatat ccttctcaac agccctggca agcgccgagt ttcgcgtgca agtgtgctcc
2760acacaagtac actgcgcagc cgcatgccac cctccaaagg accacatagt caattaccca
2820gcatcacaca ccacccttgg ggtccaggat atatccacaa cggcaatgtc ttgggtgcag
2880aagattacgg gaggagtagg attaattgtt gctgttgctg ccttaatttt aattgtggtg
2940ctatgcgtgt cgtttagcag gcac
296452964DNAChikungunya virus 5atgagtcttg ccatcccagt tatgtgcctg
ttggcaaaca ccacgttccc ctgctcccag 60cccccttgca cgccctgctg ctacgaaaag
gaaccggagg aaaccctacg catgcttgag 120gacaacgtca tgagacctgg gtactatcag
ctgctacaag catccttaac atgttctccc 180caccgccagc gacgcagcac caaggacaac
ttcaatgtct ataaagccac aagaccatac 240ttagctcact gtcccgactg tggagaaggg
cactcgtgcc atagtcccgt agcactagaa 300cgcatcagaa atgaagcgac agacgggacg
ctgaaaatcc aggtctcctt gcaaatcgga 360ataaagacgg atgacagcca cgattggacc
aagctgcgtt atatggacaa ccacatgcca 420gcagacgcag agagggcggg gctatttgta
agaacatcag caccgtgtac gattactgga 480acaatgggac acttcatcct ggcccgatgt
ccaaaagggg aaactctgac ggtgggattc 540actgacagta ggaagattag tcactcatgt
acgcacccat ttcaccacga ccctcctgtg 600ataggtcggg aaaaattcca ttcccgaccg
cagcacggta aagagctacc ttgcagcacg 660tacgtgcaga gcaccgccgc aactaccgag
gagatagagg tacacatgcc cccagacacc 720cctgatcgca cattaatgtc acaacagtcc
ggcaacgtaa agatcacagt caatggccag 780acggtgcggt acaagtgtaa ttgcggtggc
tcaaatgaag gactaacaac tacagacaaa 840gtgattaata actgcaaggt tgatcaatgt
catgccgcgg tcaccaatca caaaaagtgg 900cagtataact cccctctggt cccgcgtaat
gctgaacttg gggaccgaaa aggaaaaatt 960cacatcccgt ttccgctggc aaatgtaaca
tgcagggtgc ctaaagcaag gaaccccacc 1020gtgacgtacg ggaaaaacca agtcatcatg
ctactgtatc ctgaccaccc aacactcctg 1080tcctaccgga atatgggaga agaaccaaac
tatcaagaag agtgggtgat gcataagaag 1140gaagtcgtgc taaccgtgcc gactgaaggg
ctcgaggtca cgtggggcaa caacgagccg 1200tataagtatt ggccgcagtt atctacaaac
ggtacagccc atggccaccc gcatgagata 1260attctgtatt attatgagct gtaccccact
atgactgtag tagttgtgtc agtggccacg 1320ttcatactcc tgtcgatggt gggtatggca
gcggggatgt gcatgtgtgc acgacgcaga 1380tgcatcacac cgtatgaact gacaccagga
gctaccgtcc ctttcctgct tagcctaata 1440tgctgcatca gaacagctaa agcggccaca
taccaagagg ctgcgatata cctgtggaac 1500gagcagcaac ctttgttttg gctacaagcc
cttattccgc tggcagccct gattgttcta 1560tgcaactgtc tgagactctt accatgctgc
tgtaaaacgt tggctttttt agccgtaatg 1620agcgtcggtg cccacactgt gagcgcgtac
gaacacgtaa cagtgatccc gaacacggtg 1680ggagtaccgt ataagactct agtcaataga
cctggctaca gccccatggt attggagatg 1740gaactactgt cagtcacttt ggagccaaca
ctatcgcttg attacatcac gtgcgagtac 1800aaaaccgtca tcccgtctcc gtacgtgaag
tgctgcggta cagcagagtg caaggacaaa 1860aacctacctg actacagctg taaggtcttc
accggcgtct acccatttat gtggggcggc 1920gcctactgct tctgcgacgc tgaaaacacg
cagttgagcg aagcacacgt ggagaagtcc 1980gaatcatgca aaacagaatt tgcatcagca
tacagggctc ataccgcatc tgcatcagct 2040aagctccgcg tcctttacca aggaaataac
atcactgtaa ctgcctatgc aaacggcgac 2100catgccgtca cagttaagga cgccaaattc
attgtggggc caatgtcttc agcctggaca 2160cctttcgaca acaaaattgt ggtgtacaaa
ggtgacgtct ataacatgga ctacccgccc 2220tttggcgcag gaagaccagg acaatttggc
gatatccaaa gtcgcacacc tgagagtaaa 2280gacgtctatg ctaatacaca actggtactg
cagagaccgg ctgtgggtac ggtacacgtg 2340ccatactctc aggcaccatc tggctttaag
tattggctaa aagaacgcgg ggcgtcgctg 2400cagcacacag caccatttgg ctgccaaata
gcaacaaacc cggtaagagc ggtgaactgc 2460gccgtaggga acatgcccat ctccatcgac
ataccggaag cggccttcac tagggtcgtc 2520gacgcgccct ctttaacgga catgtcgtgc
gaggtaccag cctgcaccca ttcctcagac 2580tttgggggcg tcgccattat taaatatgca
gccagcaaga aaggcaagtg tgcggtgcat 2640tcgatgacta acgccgtcac tattcgggaa
gctgagatag aagttgaagg gaattctcag 2700ctgcaaatct ctttctcgac ggccttagcc
agcgccgaat tccgcgtaca agtctgttct 2760acacaagtac actgtgcagc cgagtgccac
cccccgaagg accacatagt caactacccg 2820gcgtcacata ccaccctcgg ggtccaggac
atctccgcta cggcgatgtc atgggtgcag 2880aagatcacgg gaggtgtggg actggttgtt
gctgttgccg cactgattct aatcgtggtg 2940ctatgcgtgt cgttcagcag gcac
296463747DNAChikungunya virus
6atggagttca tcccgacgca aactttctat aacagaaggt accaaccccg accctgggcc
60ccacgcccta caattcaagt aattagacct agaccacgtc cacagaggca ggctgggcaa
120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag
180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac
240ccaaagcaaa agaagcaacc accacaaaag aagccggctc aaaagaagaa gaaaccaggc
300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt caagcatgaa
360ggcaaagtga tgggctacgc atgcctggtg ggggataaag taatgaaacc agcacatgtg
420aagggaacta tcgacaatgc cgatctggct aaactggcct ttaagcggtc gtctaaatac
480gatcttgaat gtgcacagat accggtgcac atgaagtctg atgcctcgaa gtttacccac
540gagaaacccg aggggtacta taactggcat cacggagcag tgcagtattc aggaggccgg
600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg gcagaccgat cttcgacaac
660aaaggacggg tggtggccat cgtcctagga ggggccaacg aaggtgcccg cacggccctc
720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta cccctgaggg agccgaagag
780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
900gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
960caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
1140ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
1200gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
1260accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
1320acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
1380ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
1500cctgaccgca cgctgatgac gcagcagtct ggcaacgtga agatcacagt taatgggcag
1560acggtgcggt acaagtgcaa ctgcggtggc tcaaacgagg gactgacaac cacagacaaa
1620gtgatcaata actgcaaaat tgatcagtgc catgctgcag tcactaatca caagaattgg
1680caatacaact cccctttagt cccgcgcaac gctgaactcg gggaccgtaa aggaaagatc
1740cacatcccat tcccattggc aaacgtgact tgcagagtgc caaaagcaag aaaccctaca
1800gtaacttacg gaaaaaacca agtcaccatg ctgctgtatc ctgaccatcc gacactcttg
1860tcttaccgta acatgggaca ggaaccaaat taccacgagg agtgggtgac acacaagaag
1920gaggttacct tgaccgtgcc tactgagggt ctggaggtca cttggggcaa caacgaacca
1980tacaagtact ggccgcagat gtctacgaac ggtactgctc atggtcaccc acatgagata
2040atcttgtact attatgagct gtaccccact atgactgtag tcattgtgtc ggtggcctcg
2100ttcgtgcttc tgtcgatggt gggcacagca gtgggaatgt gtgtgtgcgc acggcgcaga
2160tgcattacac catatgaatt aacaccagga gccactgttc ccttcctgct cagcctgcta
2220tgctgcgtca gaacgaccaa ggcggccaca tattacgagg ctgcggcata tctatggaac
2280gaacagcagc ccctgttctg gttgcaggct cttatcccgc tggccgcctt gatcgtcctg
2340tgcaactgtc tgaaactctt gccatgctgc tgtaagaccc tggctttttt agccgtaatg
2400agcatcggtg cccacactgt gagcgcgtac gaacacgtaa cagtgatccc gaacacggtg
2460ggagtaccgt ataagactct tgtcaacaga ccgggttaca gccccatggt gttggagatg
2520gagctacaat cagtcacctt ggaaccaaca ctgtcacttg actacatcac gtgcgagtac
2580aaaactgtca tcccctcccc gtacgtgaag tgctgtggta cagcagagtg caaggacaag
2640agcctaccag actacagctg caaggtcttt actggagtct acccatttat gtggggcggc
2700gcctactgct tttgcgacgc cgaaaatacg caattgagcg aggcacatgt agagaaatct
2760gaatcttgca aaacagagtt tgcatcggcc tacagagccc acaccgcatc ggcgtcggcg
2820aagctccgcg tcctttacca aggaaacaac attaccgtag ctgcctacgc taacggtgac
2880catgccgtca cagtaaagga cgccaagttt gtcgtgggcc caatgtcctc cgcctggaca
2940ccttttgaca acaaaatcgt ggtgtacaaa ggcgacgtct acaacatgga ctacccacct
3000tttggcgcag gaagaccagg acaatttggt gacattcaaa gtcgtacacc ggaaagtaaa
3060gacgtttatg ccaacactca gttggtacta cagaggccag cagcaggcac ggtacatgta
3120ccatactctc aggcaccatc tggcttcaag tattggctga aggaacgagg agcatcgcta
3180cagcacacgg caccgttcgg ttgccagatt gcgacaaacc cggtaagagc tgtaaattgc
3240gctgtgggga acataccaat ttccatcgac ataccggatg cggcctttac tagggttgtc
3300gatgcaccct ctgtaacgga catgtcatgc gaagtaccag cctgcactca ctcctccgac
3360tttgggggcg tcgccatcat caaatacaca gctagcaaga aaggtaaatg tgcagtacat
3420tcgatgacca acgccgttac cattcgagaa gccgacgtag aagtagaggg gaactcccag
3480ctgcaaatat ccttctcaac agccctggca agcgccgagt ttcgcgtgca agtgtgctcc
3540acacaagtac actgcgcagc cgcatgccac cctccaaagg accacatagt caattaccca
3600gcatcacaca ccacccttgg ggtccaggat atatccacaa cggcaatgtc ttgggtgcag
3660aagattacgg gaggagtagg attaattgtt gctgttgctg ccttaatttt aattgtggtg
3720ctatgcgtgt cgtttagcag gcactaa
374773747DNAChikungunya virus 7atggagttca tcccaaccca aactttttac
aataggaggt accagcctcg accctggact 60ccgcgcccta ctatccaagt catcaggccc
agaccgcgcc ctcagaggca agctgggcaa 120cttgcccagc tgatctcagc agttaataaa
ctgacaatgc gcgcggtacc acaacagaag 180ccacgcagga atcggaagaa taagaagcaa
aagcaaaaac aacaggcgcc acaaaacaac 240acaaatcaaa agaagcagcc acctaaaaag
aaaccggctc aaaagaaaaa gaagccgggc 300cgcagagaga ggatgtgcat gaaaatcgaa
aatgattgta ttttcgaagt caagcacgaa 360ggtaaggtaa caggttacgc gtgcctggtg
ggggacaaag taatgaaacc agcacacgta 420aaggggacca tcgataacgc ggacctggcc
aaactggcct ttaagcggtc atctaagtat 480gaccttgaat gcgcgcagat acccgtgcac
atgaagtccg acgcttcgaa gttcacccat 540gagaaaccgg aggggtacta caactggcac
cacggagcag tacagtactc aggaggccgg 600ttcaccatcc ctacaggtgc tggcaaacca
ggggacagcg gcagaccgat cttcgacaac 660aagggacgcg tggtggccat agtcttagga
ggagctaatg aaggagcccg tacagccctc 720tcggtggtga cctggaataa agacattgtc
actaaaatca cccccgaggg ggccgaagag 780tggagtcttg ccatcccagt tatgtgcctg
ttggcaaaca ccacgttccc ctgctcccag 840cccccttgca cgccctgctg ctacgaaaag
gaaccggagg aaaccctacg catgcttgag 900gacaacgtca tgagacctgg gtactatcag
ctgctacaag catccttaac atgttctccc 960caccgccagc gacgcagcac caaggacaac
ttcaatgtct ataaagccac aagaccatac 1020ttagctcact gtcccgactg tggagaaggg
cactcgtgcc atagtcccgt agcactagaa 1080cgcatcagaa atgaagcgac agacgggacg
ctgaaaatcc aggtctcctt gcaaatcgga 1140ataaagacgg atgacagcca cgattggacc
aagctgcgtt atatggacaa ccacatgcca 1200gcagacgcag agagggcggg gctatttgta
agaacatcag caccgtgtac gattactgga 1260acaatgggac acttcatcct ggcccgatgt
ccaaaagggg aaactctgac ggtgggattc 1320actgacagta ggaagattag tcactcatgt
acgcacccat ttcaccacga ccctcctgtg 1380ataggtcggg aaaaattcca ttcccgaccg
cagcacggta aagagctacc ttgcagcacg 1440tacgtgcaga gcaccgccgc aactaccgag
gagatagagg tacacatgcc cccagacacc 1500cctgatcgca cattaatgtc acaacagtcc
ggcaacgtaa agatcacagt caatggccag 1560acggtgcggt acaagtgtaa ttgcggtggc
tcaaatgaag gactaacaac tacagacaaa 1620gtgattaata actgcaaggt tgatcaatgt
catgccgcgg tcaccaatca caaaaagtgg 1680cagtataact cccctctggt cccgcgtaat
gctgaacttg gggaccgaaa aggaaaaatt 1740cacatcccgt ttccgctggc aaatgtaaca
tgcagggtgc ctaaagcaag gaaccccacc 1800gtgacgtacg ggaaaaacca agtcatcatg
ctactgtatc ctgaccaccc aacactcctg 1860tcctaccgga atatgggaga agaaccaaac
tatcaagaag agtgggtgat gcataagaag 1920gaagtcgtgc taaccgtgcc gactgaaggg
ctcgaggtca cgtggggcaa caacgagccg 1980tataagtatt ggccgcagtt atctacaaac
ggtacagccc atggccaccc gcatgagata 2040attctgtatt attatgagct gtaccccact
atgactgtag tagttgtgtc agtggccacg 2100ttcatactcc tgtcgatggt gggtatggca
gcggggatgt gcatgtgtgc acgacgcaga 2160tgcatcacac cgtatgaact gacaccagga
gctaccgtcc ctttcctgct tagcctaata 2220tgctgcatca gaacagctaa agcggccaca
taccaagagg ctgcgatata cctgtggaac 2280gagcagcaac ctttgttttg gctacaagcc
cttattccgc tggcagccct gattgttcta 2340tgcaactgtc tgagactctt accatgctgc
tgtaaaacgt tggctttttt agccgtaatg 2400agcgtcggtg cccacactgt gagcgcgtac
gaacacgtaa cagtgatccc gaacacggtg 2460ggagtaccgt ataagactct agtcaataga
cctggctaca gccccatggt attggagatg 2520gaactactgt cagtcacttt ggagccaaca
ctatcgcttg attacatcac gtgcgagtac 2580aaaaccgtca tcccgtctcc gtacgtgaag
tgctgcggta cagcagagtg caaggacaaa 2640aacctacctg actacagctg taaggtcttc
accggcgtct acccatttat gtggggcggc 2700gcctactgct tctgcgacgc tgaaaacacg
cagttgagcg aagcacacgt ggagaagtcc 2760gaatcatgca aaacagaatt tgcatcagca
tacagggctc ataccgcatc tgcatcagct 2820aagctccgcg tcctttacca aggaaataac
atcactgtaa ctgcctatgc aaacggcgac 2880catgccgtca cagttaagga cgccaaattc
attgtggggc caatgtcttc agcctggaca 2940cctttcgaca acaaaattgt ggtgtacaaa
ggtgacgtct ataacatgga ctacccgccc 3000tttggcgcag gaagaccagg acaatttggc
gatatccaaa gtcgcacacc tgagagtaaa 3060gacgtctatg ctaatacaca actggtactg
cagagaccgg ctgtgggtac ggtacacgtg 3120ccatactctc aggcaccatc tggctttaag
tattggctaa aagaacgcgg ggcgtcgctg 3180cagcacacag caccatttgg ctgccaaata
gcaacaaacc cggtaagagc ggtgaactgc 3240gccgtaggga acatgcccat ctccatcgac
ataccggaag cggccttcac tagggtcgtc 3300gacgcgccct ctttaacgga catgtcgtgc
gaggtaccag cctgcaccca ttcctcagac 3360tttgggggcg tcgccattat taaatatgca
gccagcaaga aaggcaagtg tgcggtgcat 3420tcgatgacta acgccgtcac tattcgggaa
gctgagatag aagttgaagg gaattctcag 3480ctgcaaatct ctttctcgac ggccttagcc
agcgccgaat tccgcgtaca agtctgttct 3540acacaagtac actgtgcagc cgagtgccac
cccccgaagg accacatagt caactacccg 3600gcgtcacata ccaccctcgg ggtccaggac
atctccgcta cggcgatgtc atgggtgcag 3660aagatcacgg gaggtgtggg actggttgtt
gctgttgccg cactgattct aatcgtggtg 3720ctatgcgtgt cgttcagcag gcactaa
374788404DNAArtificial SequenceSynthetic
vector VLP_CHI512 8gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat
tggctcatgt 60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta
atcaattacg 120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac
ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac
gtatgttccc 240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt
acggtaaact 300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat
tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga
ctttcctact 420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt
ttggcagtac 480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca
ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg
tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta
tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt
tgacctccat 720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta
gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac
agactgttcc 840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat
atcgcggccg 900ccaccatgga gttcatcccg acgcaaactt tctataacag aaggtaccaa
ccccgaccct 960gggccccacg ccctacaatt caagtaatta gacctagacc acgtccacag
aggcaggctg 1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac catgcgcgcg
gtacctcaac 1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag
gcgccgcaaa 1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag
aagaagaaac 1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc
gaagtcaagc 1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga taaagtaatg
aaaccagcac 1320atgtgaaggg aactatcgac aatgccgatc tggctaaact ggcctttaag
cggtcgtcta 1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc
tcgaagttta 1440cccacgagaa acccgagggg tactataact ggcatcacgg agcagtgcag
tattcaggag 1500gccggttcac tatcccgacg ggtgcaggca agccgggaga cagcggcaga
ccgatcttcg 1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc caacgaaggt
gcccgcacgg 1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct
gagggagccg 1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc aaacactaca
ttcccctgct 1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc
ttgcgcatgc 1800ttgaggacaa cgtgatgaga cccggatact accagctact aaaagcatcg
ctgacttgct 1860ctccccaccg ccaaagacgc agtactaagg acaattttaa tgtctataaa
gccacaagac 1920catatctagc tcattgtcct gactgcggag aagggcattc gtgccacagc
cctatcgcat 1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc
tctttgcaga 2040tcgggataaa gacagatgac agccacgatt ggaccaagct gcgctatatg
gatagccata 2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac ttcagcaccg
tgcacgatca 2160ccgggaccat gggacacttt attctcgccc gatgcccgaa aggagagacg
ctgacagtgg 2220gatttacgga cagcagaaag atcagccaca catgcacaca cccgttccat
catgaaccac 2280ctgtgatagg tagggagagg ttccactctc gaccacaaca tggtaaagag
ttaccttgca 2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat agaggtgcat
atgcccccag 2400atactcctga ccgcacgctg atgacgcagc agtccggagg atccaacgtg
aagatcacag 2460ttaatgggca gacggtgcgg tacaagtgca actgcggtgg ctcaaacgag
ggactgacaa 2520ccacagacaa agtgatcaat aactgcaaaa ttgatcagtg ccatgctgca
gtcactaatc 2580acaagaattg gcaatacaac tcccctttag tcccgcgcaa cgctgaactc
ggggaccgta 2640aaggaaagat ccacatccca ttcccattgg caaacgtgac ttgcagagtg
ccaaaagcaa 2700gaaaccctac agtaacttac ggaaaaaacc aagtcaccat gctgctgtat
cctgaccatc 2760cgacactctt gtcttaccgt aacatgggac aggaaccaaa ttaccacgag
gagtgggtga 2820cacacaagaa ggaggttacc ttgaccgtgc ctactgaggg tctggaggtc
acttggggca 2880acaacgaacc atacaagtac tggccgcaga tgtctacgaa cggtactgct
catggtcacc 2940cacatgagat aatcttgtac tattatgagc tgtaccccac tatgactgta
gtcattgtgt 3000cggtggcctc gttcgtgctt ctgtcgatgg tgggcacagc agtgggaatg
tgtgtgtgcg 3060cacggcgcag atgcattaca ccatatgaat taacaccagg agccactgtt
cccttcctgc 3120tcagcctgct atgctgcgtc agaacgacca aggcggccac atattacgag
gctgcggcat 3180atctatggaa cgaacagcag cccctgttct ggttgcaggc tcttatcccg
ctggccgcct 3240tgatcgtcct gtgcaactgt ctgaaactct tgccatgctg ctgtaagacc
ctggcttttt 3300tagccgtaat gagcatcggt gcccacactg tgagcgcgta cgaacacgta
acagtgatcc 3360cgaacacggt gggagtaccg tataagactc ttgtcaacag accgggttac
agccccatgg 3420tgttggagat ggagctacaa tcagtcacct tggaaccaac actgtcactt
gactacatca 3480cgtgcgagta caaaactgtc atcccctccc cgtacgtgaa gtgctgtggt
acagcagagt 3540gcaaggacaa gagcctacca gactacagct gcaaggtctt tactggagtc
tacccattta 3600tgtggggcgg cgcctactgc ttttgcgacg ccgaaaatac gcaattgagc
gaggcacatg 3660tagagaaatc tgaatcttgc aaaacagagt ttgcatcggc ctacagagcc
cacaccgcat 3720cggcgtcggc gaagctccgc gtcctttacc aaggaaacaa cattaccgta
gctgcctacg 3780ctaacggtga ccatgccgtc acagtaaagg acgccaagtt tgtcgtgggc
ccaatgtcct 3840ccgcctggac accttttgac aacaaaatcg tggtgtacaa aggcgacgtc
tacaacatgg 3900actacccacc ttttggcgca ggaagaccag gacaatttgg tgacattcaa
agtcgtacac 3960cggaaagtaa agacgtttat gccaacactc agttggtact acagaggcca
gcagcaggca 4020cggtacatgt accatactct caggcaccat ctggcttcaa gtattggctg
aaggaacgag 4080gagcatcgct acagcacacg gcaccgttcg gttgccagat tgcgacaaac
ccggtaagag 4140ctgtaaattg cgctgtgggg aacataccaa tttccatcga cataccggat
gcggccttta 4200ctagggttgt cgatgcaccc tctgtaacgg acatgtcatg cgaagtacca
gcctgcactc 4260actcctccga ctttgggggc gtcgccatca tcaaatacac agctagcaag
aaaggtaaat 4320gtgcagtaca ttcgatgacc aacgccgtta ccattcgaga agccgacgta
gaagtagagg 4380ggaactccca gctgcaaata tccttctcaa cagccctggc aagcgccgag
tttcgcgtgc 4440aagtgtgctc cacacaagta cactgcgcag ccgcatgcca ccctccaaag
gaccacatag 4500tcaattaccc agcatcacac accacccttg gggtccagga tatatccaca
acggcaatgt 4560cttgggtgca gaagattacg ggaggagtag gattaattgt tgctgttgct
gccttaattt 4620taattgtggt gctatgcgtg tcgtttagca ggcactaagg atctagatct
gctgtgcctt 4680ctagttgcca gccatctgtt gtttgcccct cccccgtgcc ttccttgacc
ctggaaggtg 4740ccactcccac tgtcctttcc taataaaatg aggaaattgc atcgcattgt
ctgagtaggt 4800gtcattctat tctggggggt ggggtggggc aggacagcaa gggggaggat
tgggaagaca 4860atagcaggca tgctggggat gcggtgggct ctatgggtac ccaggtgctg
aagaattgac 4920ccggttcctc ctgggccaga aagaagcagg cacatcccct tctctgtgac
acaccctgtc 4980cacgcccctg gttcttagtt ccagccccac tcataggaca ctcatagctc
aggagggctc 5040cgccttcaat cccacccgct aaagtacttg gagcggtctc tccctccctc
atcagcccac 5100caaaccaaac ctagcctcca agagtgggaa gaaattaaag caagataggc
tattaagtgc 5160agagggagag aaaatgcctc caacatgtga ggaagtaatg agagaaatca
tagaatttta 5220aggccatgat ttaaggccat catggcctaa gcttgaaagg agataggatc
aaagcttggc 5280gtaatcatgg tcatagctgt ttcctgtgtg aaattgttat ccgctcacaa
ttccacacaa 5340catacgagcc ggaagcataa agtgtaaagc ctggggtgcc taatgagtga
gctaactcac 5400attaattgcg ttgcgctcac tgcccgcttt ccagtcggga aacctgtcgt
gccagctgca 5460ttaatgaatc ggccaacgcg cggggagagg cggtttgcgt attgggcgct
cttccgcttc 5520ctcgctcact gactcgctgc gctcggtcgt tcggctgcgg cgagcggtat
cagctcactc 5580aaaggcggta atacggttat ccacagaatc aggggataac gcaggaaaga
acatgtgagc 5640aaaaggccag caaaaggcca ggaaccgtaa aaaggccgcg ttgctggcgt
ttttccatag 5700gctccgcccc cctgacgagc atcacaaaaa tcgacgctca agtcagaggt
ggcgaaaccc 5760gacaggacta taaagatacc aggcgtttcc ccctggaagc tccctcgtgc
gctctcctgt 5820tccgaccctg ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa
gcgtggcgct 5880ttctcatagc tcacgctgta ggtatctcag ttcggtgtag gtcgttcgct
ccaagctggg 5940ctgtgtgcac gaaccccccg ttcagcccga ccgctgcgcc ttatccggta
actatcgtct 6000tgagtccaac ccggtaagac acgacttatc gccactggca gcagccactg
gtaacaggat 6060tagcagagcg aggtatgtag gcggtgctac agagttcttg aagtggtggc
ctaactacgg 6120ctacactaga agaacagtat ttggtatctg cgctctgctg aagccagtta
ccttcggaaa 6180aagagttggt agctcttgat ccggcaaaca aaccaccgct ggtagcggtg
gtttttttgt 6240ttgcaagcag cagattacgc gcagaaaaaa aggatctcaa gaagatcctt
tgatcttttc 6300tacggggtct gacgctcagt ggaacgaaaa ctcacgttaa gggattttgg
tcatgagatt 6360atcaaaaagg atcttcacct agatcctttt aaattaaaaa tgaagtttta
aatcaatcta 6420aagtatatat gagtaaactt ggtctgacag ttaccaatgc ttaatcagtg
aggcacctat 6480ctcagcgatc tgtctatttc gttcatccat agttgcctga ctccccgtcg
tgtagataac 6540tacgatacgg gagggcttac catctggccc cagtgctgca atgataccgc
gagaaccacg 6600ctcaccggct ccagatttat cagcaataaa ccagccagcc ggaagggccg
agcgcagaag 6660tggtcctgca actttatccg cctccatcca gtctattaat tgttgccggg
aagctagagt 6720aagtagttcg ccagttaata gtttgcgcaa cgttgttgcc attgctacag
gcatcgtggt 6780gtcacgctcg tcgtttggta tggcttcatt cagctccggt tcccaacgat
caaggcgagt 6840tacatgatcc cccatgttgt gcaaaaaagc ggttagctcc ttcggtcctc
cgatcgttgt 6900cagaagtaag ttggccgcag tgttatcact catggttatg gcagcactgc
ataattctct 6960tactgtcatg ccatccgtaa gatgcttttc tgtgactggt gagtactcaa
ccaagtcatt 7020ctgagaatag tgtatgcggc gaccgagttg ctcttgcccg gcgtcaatac
gggataatac 7080cgcgccacat agcagaactt taaaagtgct catcattgga aaacgttctt
cggggcgaaa 7140actctcaagg atcttaccgc tgttgagatc cagttcgatg taacccactc
gtgcacccaa 7200ctgatcttca gcatctttta ctttcaccag cgtttctggg tgagcaaaaa
caggaaggca 7260aaatgccgca aaaaagggaa taagggcgac acggaaatgt tgaatactca
tactcttcct 7320ttttcaatat tattgaagca tttatcaggg ttattgtctc atgagcggat
acatatttga 7380atgtatttag aaaaataaac aaataggggt tccgcgcaca tttccccgaa
aagtgccacc 7440tgacgtctaa gaaaccatta ttatcatgac attaacctat aaaaataggc
gtatcacgag 7500gccctttcgg gtcgcgcgtt tcggtgatga cggtgaaaac ctctgacaca
tgcagctccc 7560gttgacggtc acagcttgtc tgtaagcgga tgccgggagc agacaagccc
gtcagggcgc 7620gtcagcgggt gttggcgggt gtcggggctg gcttaactat gcggcatcag
agcagattgt 7680actgagagtg caccataaaa ttgtaaacgt taatattttg ttaaaattcg
cgttaaattt 7740ttgttaaatc agctcatttt ttaaccaata ggccgaaatc ggcaaaatcc
cttataaatc 7800aaaagaatag cccgagatag ggttgagtgt tgttccagtt tggaacaaga
gtccactatt 7860aaagaacgtg gactccaacg tcaaagggcg aaaaaccgtc tatcagggcg
atggcccact 7920acgtgaacca tcacccaaat caagtttttt ggggtcgagg tgccgtaaag
cactaaatcg 7980gaaccctaaa gggagccccc gatttagagc ttgacgggga aagccggcga
acgtggcgag 8040aaaggaaggg aagaaagcga aaggagcggg cgctagggcg ctggcaagtg
tagcggtcac 8100gctgcgcgta accaccacac ccgccgcgct taatgcgccg ctacagggcg
cgtactatgg 8160ttgctttgac gtatgcggtg tgaaataccg cacagatgcg taaggagaaa
ataccgcatc 8220aggcgccatt cgccattcag gctgcgcaac tgttgggaag ggcgatcggt
gcgggcctct 8280tcgctattac gccagctggc gaaaggggga tgtgctgcaa ggcgattaag
ttgggtaacg 8340ccagggtttt cccagtcacg acgttgtaaa acgacggcca gtgaattcca
tggtctcaac 8400tttc
840498410DNAArtificial SequenceSynthetic vector VLP_CHI 532
9gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgga gttcatcccg acgcaaactt tctataacag aaggtaccaa ccccgaccct
960gggccccacg ccctacaatt caagtaatta gacctagacc acgtccacag aggcaggctg
1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac catgcgcgcg gtacctcaac
1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag gcgccgcaaa
1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag aagaagaaac
1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc gaagtcaagc
1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga taaagtaatg aaaccagcac
1320atgtgaaggg aactatcgac aatgccgatc tggctaaact ggcctttaag cggtcgtcta
1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc tcgaagttta
1440cccacgagaa acccgagggg tactataact ggcatcacgg agcagtgcag tattcaggag
1500gccggttcac tatcccgacg ggtgcaggca agccgggaga cagcggcaga ccgatcttcg
1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc caacgaaggt gcccgcacgg
1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct gagggagccg
1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc aaacactaca ttcccctgct
1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc ttgcgcatgc
1800ttgaggacaa cgtgatgaga cccggatact accagctact aaaagcatcg ctgacttgct
1860ctccccaccg ccaaagacgc agtactaagg acaattttaa tgtctataaa gccacaagac
1920catatctagc tcattgtcct gactgcggag aagggcattc gtgccacagc cctatcgcat
1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc tctttgcaga
2040tcgggataaa gacagatgac agccacgatt ggaccaagct gcgctatatg gatagccata
2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac ttcagcaccg tgcacgatca
2160ccgggaccat gggacacttt attctcgccc gatgcccgaa aggagagacg ctgacagtgg
2220gatttacgga cagcagaaag atcagccaca catgcacaca cccgttccat catgaaccac
2280ctgtgatagg tagggagagg ttccactctc gaccacaaca tggtaaagag ttaccttgca
2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat agaggtgcat atgcccccag
2400atactcctga ccgcacgctg atgacgcagc agtctggcaa cgtgaagatc acagttaatg
2460ggcagacggt gcggtacaag tgcaactgcg gtggctccgg aagtggatcc aacgagggac
2520tgacaaccac agacaaagtg atcaataact gcaaaattga tcagtgccat gctgcagtca
2580ctaatcacaa gaattggcaa tacaactccc ctttagtccc gcgcaacgct gaactcgggg
2640accgtaaagg aaagatccac atcccattcc cattggcaaa cgtgacttgc agagtgccaa
2700aagcaagaaa ccctacagta acttacggaa aaaaccaagt caccatgctg ctgtatcctg
2760accatccgac actcttgtct taccgtaaca tgggacagga accaaattac cacgaggagt
2820gggtgacaca caagaaggag gttaccttga ccgtgcctac tgagggtctg gaggtcactt
2880ggggcaacaa cgaaccatac aagtactggc cgcagatgtc tacgaacggt actgctcatg
2940gtcacccaca tgagataatc ttgtactatt atgagctgta ccccactatg actgtagtca
3000ttgtgtcggt ggcctcgttc gtgcttctgt cgatggtggg cacagcagtg ggaatgtgtg
3060tgtgcgcacg gcgcagatgc attacaccat atgaattaac accaggagcc actgttccct
3120tcctgctcag cctgctatgc tgcgtcagaa cgaccaaggc ggccacatat tacgaggctg
3180cggcatatct atggaacgaa cagcagcccc tgttctggtt gcaggctctt atcccgctgg
3240ccgccttgat cgtcctgtgc aactgtctga aactcttgcc atgctgctgt aagaccctgg
3300cttttttagc cgtaatgagc atcggtgccc acactgtgag cgcgtacgaa cacgtaacag
3360tgatcccgaa cacggtggga gtaccgtata agactcttgt caacagaccg ggttacagcc
3420ccatggtgtt ggagatggag ctacaatcag tcaccttgga accaacactg tcacttgact
3480acatcacgtg cgagtacaaa actgtcatcc cctccccgta cgtgaagtgc tgtggtacag
3540cagagtgcaa ggacaagagc ctaccagact acagctgcaa ggtctttact ggagtctacc
3600catttatgtg gggcggcgcc tactgctttt gcgacgccga aaatacgcaa ttgagcgagg
3660cacatgtaga gaaatctgaa tcttgcaaaa cagagtttgc atcggcctac agagcccaca
3720ccgcatcggc gtcggcgaag ctccgcgtcc tttaccaagg aaacaacatt accgtagctg
3780cctacgctaa cggtgaccat gccgtcacag taaaggacgc caagtttgtc gtgggcccaa
3840tgtcctccgc ctggacacct tttgacaaca aaatcgtggt gtacaaaggc gacgtctaca
3900acatggacta cccacctttt ggcgcaggaa gaccaggaca atttggtgac attcaaagtc
3960gtacaccgga aagtaaagac gtttatgcca acactcagtt ggtactacag aggccagcag
4020caggcacggt acatgtacca tactctcagg caccatctgg cttcaagtat tggctgaagg
4080aacgaggagc atcgctacag cacacggcac cgttcggttg ccagattgcg acaaacccgg
4140taagagctgt aaattgcgct gtggggaaca taccaatttc catcgacata ccggatgcgg
4200cctttactag ggttgtcgat gcaccctctg taacggacat gtcatgcgaa gtaccagcct
4260gcactcactc ctccgacttt gggggcgtcg ccatcatcaa atacacagct agcaagaaag
4320gtaaatgtgc agtacattcg atgaccaacg ccgttaccat tcgagaagcc gacgtagaag
4380tagaggggaa ctcccagctg caaatatcct tctcaacagc cctggcaagc gccgagtttc
4440gcgtgcaagt gtgctccaca caagtacact gcgcagccgc atgccaccct ccaaaggacc
4500acatagtcaa ttacccagca tcacacacca cccttggggt ccaggatata tccacaacgg
4560caatgtcttg ggtgcagaag attacgggag gagtaggatt aattgttgct gttgctgcct
4620taattttaat tgtggtgcta tgcgtgtcgt ttagcaggca ctaaggatct agatctgctg
4680tgccttctag ttgccagcca tctgttgttt gcccctcccc cgtgccttcc ttgaccctgg
4740aaggtgccac tcccactgtc ctttcctaat aaaatgagga aattgcatcg cattgtctga
4800gtaggtgtca ttctattctg gggggtgggg tggggcagga cagcaagggg gaggattggg
4860aagacaatag caggcatgct ggggatgcgg tgggctctat gggtacccag gtgctgaaga
4920attgacccgg ttcctcctgg gccagaaaga agcaggcaca tccccttctc tgtgacacac
4980cctgtccacg cccctggttc ttagttccag ccccactcat aggacactca tagctcagga
5040gggctccgcc ttcaatccca cccgctaaag tacttggagc ggtctctccc tccctcatca
5100gcccaccaaa ccaaacctag cctccaagag tgggaagaaa ttaaagcaag ataggctatt
5160aagtgcagag ggagagaaaa tgcctccaac atgtgaggaa gtaatgagag aaatcataga
5220attttaaggc catgatttaa ggccatcatg gcctaagctt gaaaggagat aggatccaag
5280cttggcgtaa tcatggtcat agctgtttcc tgtgtgaaat tgttatccgc tcacaattcc
5340acacaacata cgagccggaa gcataaagtg taaagcctgg ggtgcctaat gagtgagcta
5400actcacatta attgcgttgc gctcactgcc cgctttccag tcgggaaacc tgtcgtgcca
5460gctgcattaa tgaatcggcc aacgcgcggg gagaggcggt ttgcgtattg ggcgctcttc
5520cgcttcctcg ctcactgact cgctgcgctc ggtcgttcgg ctgcggcgag cggtatcagc
5580tcactcaaag gcggtaatac ggttatccac agaatcaggg gataacgcag gaaagaacat
5640gtgagcaaaa ggccagcaaa aggccaggaa ccgtaaaaag gccgcgttgc tggcgttttt
5700ccataggctc cgcccccctg acgagcatca caaaaatcga cgctcaagtc agaggtggcg
5760aaacccgaca ggactataaa gataccaggc gtttccccct ggaagctccc tcgtgcgctc
5820tcctgttccg accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt
5880ggcgctttct catagctcac gctgtaggta tctcagttcg gtgtaggtcg ttcgctccaa
5940gctgggctgt gtgcacgaac cccccgttca gcccgaccgc tgcgccttat ccggtaacta
6000tcgtcttgag tccaacccgg taagacacga cttatcgcca ctggcagcag ccactggtaa
6060caggattagc agagcgaggt atgtaggcgg tgctacagag ttcttgaagt ggtggcctaa
6120ctacggctac actagaagaa cagtatttgg tatctgcgct ctgctgaagc cagttacctt
6180cggaaaaaga gttggtagct cttgatccgg caaacaaacc accgctggta gcggtggttt
6240ttttgtttgc aagcagcaga ttacgcgcag aaaaaaagga tctcaagaag atcctttgat
6300cttttctacg gggtctgacg ctcagtggaa cgaaaactca cgttaaggga ttttggtcat
6360gagattatca aaaaggatct tcacctagat ccttttaaat taaaaatgaa gttttaaatc
6420aatctaaagt atatatgagt aaacttggtc tgacagttac caatgcttaa tcagtgaggc
6480acctatctca gcgatctgtc tatttcgttc atccatagtt gcctgactcc ccgtcgtgta
6540gataactacg atacgggagg gcttaccatc tggccccagt gctgcaatga taccgcgaga
6600accacgctca ccggctccag atttatcagc aataaaccag ccagccggaa gggccgagcg
6660cagaagtggt cctgcaactt tatccgcctc catccagtct attaattgtt gccgggaagc
6720tagagtaagt agttcgccag ttaatagttt gcgcaacgtt gttgccattg ctacaggcat
6780cgtggtgtca cgctcgtcgt ttggtatggc ttcattcagc tccggttccc aacgatcaag
6840gcgagttaca tgatccccca tgttgtgcaa aaaagcggtt agctccttcg gtcctccgat
6900cgttgtcaga agtaagttgg ccgcagtgtt atcactcatg gttatggcag cactgcataa
6960ttctcttact gtcatgccat ccgtaagatg cttttctgtg actggtgagt actcaaccaa
7020gtcattctga gaatagtgta tgcggcgacc gagttgctct tgcccggcgt caatacggga
7080taataccgcg ccacatagca gaactttaaa agtgctcatc attggaaaac gttcttcggg
7140gcgaaaactc tcaaggatct taccgctgtt gagatccagt tcgatgtaac ccactcgtgc
7200acccaactga tcttcagcat cttttacttt caccagcgtt tctgggtgag caaaaacagg
7260aaggcaaaat gccgcaaaaa agggaataag ggcgacacgg aaatgttgaa tactcatact
7320cttccttttt caatattatt gaagcattta tcagggttat tgtctcatga gcggatacat
7380atttgaatgt atttagaaaa ataaacaaat aggggttccg cgcacatttc cccgaaaagt
7440gccacctgac gtctaagaaa ccattattat catgacatta acctataaaa ataggcgtat
7500cacgaggccc tttcgggtcg cgcgtttcgg tgatgacggt gaaaacctct gacacatgca
7560gctcccgttg acggtcacag cttgtctgta agcggatgcc gggagcagac aagcccgtca
7620gggcgcgtca gcgggtgttg gcgggtgtcg gggctggctt aactatgcgg catcagagca
7680gattgtactg agagtgcacc ataaaattgt aaacgttaat attttgttaa aattcgcgtt
7740aaatttttgt taaatcagct cattttttaa ccaataggcc gaaatcggca aaatccctta
7800taaatcaaaa gaatagcccg agatagggtt gagtgttgtt ccagtttgga acaagagtcc
7860actattaaag aacgtggact ccaacgtcaa agggcgaaaa accgtctatc agggcgatgg
7920cccactacgt gaaccatcac ccaaatcaag ttttttgggg tcgaggtgcc gtaaagcact
7980aaatcggaac cctaaaggga gcccccgatt tagagcttga cggggaaagc cggcgaacgt
8040ggcgagaaag gaagggaaga aagcgaaagg agcgggcgct agggcgctgg caagtgtagc
8100ggtcacgctg cgcgtaacca ccacacccgc cgcgcttaat gcgccgctac agggcgcgta
8160ctatggttgc tttgacgtat gcggtgtgaa ataccgcaca gatgcgtaag gagaaaatac
8220cgcatcaggc gccattcgcc attcaggctg cgcaactgtt gggaagggcg atcggtgcgg
8280gcctcttcgc tattacgcca gctggcgaaa gggggatgtg ctgcaaggcg attaagttgg
8340gtaacgccag ggttttccca gtcacgacgt tgtaaaacga cggccagtga attccatggt
8400ctcaactttc
8410108431DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 518
10gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggctccg
2460gaggatccag ttcagtcacc gtgacacctc ctgatgggac tagcgccctg gtggaatgcg
2520agtgtggcgg cacaaagatc tccgagacca tcaacaagac aaaacagttc agccagtgca
2580caaagaagga gcagtgcaga gcatatcggc tgcagaacga taagtgggtg tataattctg
2640acaaactgcc caaagcagcg ggagccacct taaaaggaaa actgcatgtc ccattcttgc
2700tggcagacgg caaatgcacc gtgcctctag caccagaacc tatgataacc ttcggtttca
2760gatcagtgtc actgaaactg caccctaaga atcccacata tctaatcacc cgccaacttg
2820ctgatgagcc tcactacacg cacgagctca tatctgaacc agctgttagg aattttaccg
2880tcaccgaaaa agggtgggag tttgtatggg gaaaccaccc gccgaaaagg ttttgggcac
2940aggaaacagc acccggaaat ccacatgggc taccgcacga ggtgataact cattattacc
3000acagataccc tatgtccacc atcctgggtt tgtcaatttg tgccgccatt gcaaccgttt
3060ccgttgcagc gtctacctgg ctgttttgca gatcaagagt tgcgtgccta actccttacc
3120ggctaacacc taacgctagg ataccatttt gtctggctgt gctttgctgc gcccgcactg
3180cccgggccga gaccacctgg gagtccttgg atcacctatg gaacaataac caacagatgt
3240tctggattca attgctgatc cctctggccg ccttgatcgt agtgactcgc ctgctcaggt
3300gcgtgtgctg tgtcgtgcct tttttagtca tggccggcgc cgcaggcgcc ggcgcctacg
3360agcacgcgac cacgatgccg agccaagcgg gaatctcgta taacactata gtcaacagag
3420caggctacgc accactccct atcagcataa caccaacaaa gatcaagctg atacctacag
3480tgaacttgga gtacgtcacc tgccactaca aaacaggaat ggattcacca gccatcaaat
3540gctgcggatc tcaggaatgc actccaactt acaggcctga tgaacagtgc aaagtcttca
3600caggggttta cccgttcatg tggggtggtg catattgctt ttgcgacact gagaacaccc
3660aagtcagcaa ggcctacgta atgaaatctg acgactgcct tgcggatcat gctgaagcat
3720ataaagcgca cacagcctca gtgcaggcgt tcctcaacat cacagtggga gaacactcta
3780ttgtgactac cgtgtatgtg aatggagaaa ctcctgtgaa tttcaatggg gtcaaaataa
3840ctgcaggtcc gctttccaca gcttggacac cctttgatcg caaaatcgtg cagtatgccg
3900gggagatcta taattatgat tttcctgagt atggggcagg acaaccagga gcatttggag
3960atatacaatc cagaacagtc tcaagctctg atctgtatgc caataccaac ctagtgctgc
4020agagacccaa agcaggagcg atccacgtgc catacactca ggcaccttcg ggttttgagc
4080aatggaagaa agataaagct ccatcattga aatttaccgc ccctttcgga tgcgaaatat
4140atacaaaccc cattcgcgcc gaaaactgtg ctgtagggtc aattccatta gcctttgaca
4200ttcccgacgc cttgttcacc agggtgtcag aaacaccgac actttcagcg gccgaatgca
4260ctcttaacga gtgcgtgtat tcttccgact ttggtgggat cgccacggtc aagtactcgg
4320ccagcaagtc aggcaagtgc gcagtccatg tgccatcagg gactgctacc ctaaaagaag
4380cagcagtcga gctaaccgag caagggtcgg cgactatcca tttctcgacc gcaaatatcc
4440acccggagtt caggctccaa atatgcacat catatgttac gtgcaaaggt gattgtcacc
4500ccccgaaaga ccatattgtg acacaccctc agtatcacgc ccaaacattt acagccgcgg
4560tgtcaaaaac cgcgtggacg tggttaacat ccctgctggg aggatcagcc gtaattatta
4620taattggctt ggtgctggct actattgtgg ccatgtacgt gctgaccaac cagaaacata
4680attaaggatc tagatctgct gtgccttcta gttgccagcc atctgttgtt tgcccctccc
4740ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa taaaatgagg
4800aaattgcatc gcattgtctg agtaggtgtc attctattct ggggggtggg gtggggcagg
4860acagcaaggg ggaggattgg gaagacaata gcaggcatgc tggggatgcg gtgggctcta
4920tgggtaccca ggtgctgaag aattgacccg gttcctcctg ggccagaaag aagcaggcac
4980atccccttct ctgtgacaca ccctgtccac gcccctggtt cttagttcca gccccactca
5040taggacactc atagctcagg agggctccgc cttcaatccc acccgctaaa gtacttggag
5100cggtctctcc ctccctcatc agcccaccaa accaaaccta gcctccaaga gtgggaagaa
5160attaaagcaa gataggctat taagtgcaga gggagagaaa atgcctccaa catgtgagga
5220agtaatgaga gaaatcatag aattttaagg ccatgattta aggccatcat ggcctaagct
5280tgaaaggaga taggatcaaa gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa
5340ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg
5400gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca
5460gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
5520tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
5580gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg
5640ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
5700ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg
5760acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc
5820tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc
5880ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc
5940ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
6000ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc
6060actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga
6120gttcttgaag tggtggccta actacggcta cactagaaga acagtatttg gtatctgcgc
6180tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
6240caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg
6300atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc
6360acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa
6420ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta
6480ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt
6540tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag
6600tgctgcaatg ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca
6660gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc
6720tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt
6780tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag
6840ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt
6900tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat
6960ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt
7020gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc
7080ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat
7140cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag
7200ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt
7260ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg
7320gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta
7380ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc
7440gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt
7500aacctataaa aataggcgta tcacgaggcc ctttcgggtc gcgcgtttcg gtgatgacgg
7560tgaaaacctc tgacacatgc agctcccgtt gacggtcaca gcttgtctgt aagcggatgc
7620cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct
7680taactatgcg gcatcagagc agattgtact gagagtgcac cataaaattg taaacgttaa
7740tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
7800cgaaatcggc aaaatccctt ataaatcaaa agaatagccc gagatagggt tgagtgttgt
7860tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
7920aaccgtctat cagggcgatg gcccactacg tgaaccatca cccaaatcaa gttttttggg
7980gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
8040acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
8100tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
8160tgcgccgcta cagggcgcgt actatggttg ctttgacgta tgcggtgtga aataccgcac
8220agatgcgtaa ggagaaaata ccgcatcagg cgccattcgc cattcaggct gcgcaactgt
8280tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt
8340gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg
8400acggccagtg aattccatgg tctcaacttt c
8431118431DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 519
11gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggcagtt
2460ccggaggatc ctcagtcacc gtgacacctc ctgatgggac tagcgccctg gtggaatgcg
2520agtgtggcgg cacaaagatc tccgagacca tcaacaagac aaaacagttc agccagtgca
2580caaagaagga gcagtgcaga gcatatcggc tgcagaacga taagtgggtg tataattctg
2640acaaactgcc caaagcagcg ggagccacct taaaaggaaa actgcatgtc ccattcttgc
2700tggcagacgg caaatgcacc gtgcctctag caccagaacc tatgataacc ttcggtttca
2760gatcagtgtc actgaaactg caccctaaga atcccacata tctaatcacc cgccaacttg
2820ctgatgagcc tcactacacg cacgagctca tatctgaacc agctgttagg aattttaccg
2880tcaccgaaaa agggtgggag tttgtatggg gaaaccaccc gccgaaaagg ttttgggcac
2940aggaaacagc acccggaaat ccacatgggc taccgcacga ggtgataact cattattacc
3000acagataccc tatgtccacc atcctgggtt tgtcaatttg tgccgccatt gcaaccgttt
3060ccgttgcagc gtctacctgg ctgttttgca gatcaagagt tgcgtgccta actccttacc
3120ggctaacacc taacgctagg ataccatttt gtctggctgt gctttgctgc gcccgcactg
3180cccgggccga gaccacctgg gagtccttgg atcacctatg gaacaataac caacagatgt
3240tctggattca attgctgatc cctctggccg ccttgatcgt agtgactcgc ctgctcaggt
3300gcgtgtgctg tgtcgtgcct tttttagtca tggccggcgc cgcaggcgcc ggcgcctacg
3360agcacgcgac cacgatgccg agccaagcgg gaatctcgta taacactata gtcaacagag
3420caggctacgc accactccct atcagcataa caccaacaaa gatcaagctg atacctacag
3480tgaacttgga gtacgtcacc tgccactaca aaacaggaat ggattcacca gccatcaaat
3540gctgcggatc tcaggaatgc actccaactt acaggcctga tgaacagtgc aaagtcttca
3600caggggttta cccgttcatg tggggtggtg catattgctt ttgcgacact gagaacaccc
3660aagtcagcaa ggcctacgta atgaaatctg acgactgcct tgcggatcat gctgaagcat
3720ataaagcgca cacagcctca gtgcaggcgt tcctcaacat cacagtggga gaacactcta
3780ttgtgactac cgtgtatgtg aatggagaaa ctcctgtgaa tttcaatggg gtcaaaataa
3840ctgcaggtcc gctttccaca gcttggacac cctttgatcg caaaatcgtg cagtatgccg
3900gggagatcta taattatgat tttcctgagt atggggcagg acaaccagga gcatttggag
3960atatacaatc cagaacagtc tcaagctctg atctgtatgc caataccaac ctagtgctgc
4020agagacccaa agcaggagcg atccacgtgc catacactca ggcaccttcg ggttttgagc
4080aatggaagaa agataaagct ccatcattga aatttaccgc ccctttcgga tgcgaaatat
4140atacaaaccc cattcgcgcc gaaaactgtg ctgtagggtc aattccatta gcctttgaca
4200ttcccgacgc cttgttcacc agggtgtcag aaacaccgac actttcagcg gccgaatgca
4260ctcttaacga gtgcgtgtat tcttccgact ttggtgggat cgccacggtc aagtactcgg
4320ccagcaagtc aggcaagtgc gcagtccatg tgccatcagg gactgctacc ctaaaagaag
4380cagcagtcga gctaaccgag caagggtcgg cgactatcca tttctcgacc gcaaatatcc
4440acccggagtt caggctccaa atatgcacat catatgttac gtgcaaaggt gattgtcacc
4500ccccgaaaga ccatattgtg acacaccctc agtatcacgc ccaaacattt acagccgcgg
4560tgtcaaaaac cgcgtggacg tggttaacat ccctgctggg aggatcagcc gtaattatta
4620taattggctt ggtgctggct actattgtgg ccatgtacgt gctgaccaac cagaaacata
4680attaaggatc tagatctgct gtgccttcta gttgccagcc atctgttgtt tgcccctccc
4740ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa taaaatgagg
4800aaattgcatc gcattgtctg agtaggtgtc attctattct ggggggtggg gtggggcagg
4860acagcaaggg ggaggattgg gaagacaata gcaggcatgc tggggatgcg gtgggctcta
4920tgggtaccca ggtgctgaag aattgacccg gttcctcctg ggccagaaag aagcaggcac
4980atccccttct ctgtgacaca ccctgtccac gcccctggtt cttagttcca gccccactca
5040taggacactc atagctcagg agggctccgc cttcaatccc acccgctaaa gtacttggag
5100cggtctctcc ctccctcatc agcccaccaa accaaaccta gcctccaaga gtgggaagaa
5160attaaagcaa gataggctat taagtgcaga gggagagaaa atgcctccaa catgtgagga
5220agtaatgaga gaaatcatag aattttaagg ccatgattta aggccatcat ggcctaagct
5280tgaaaggaga taggatcaaa gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa
5340ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg
5400gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca
5460gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
5520tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
5580gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg
5640ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
5700ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg
5760acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc
5820tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc
5880ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc
5940ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
6000ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc
6060actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga
6120gttcttgaag tggtggccta actacggcta cactagaaga acagtatttg gtatctgcgc
6180tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
6240caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg
6300atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc
6360acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa
6420ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta
6480ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt
6540tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag
6600tgctgcaatg ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca
6660gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc
6720tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt
6780tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag
6840ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt
6900tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat
6960ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt
7020gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc
7080ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat
7140cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag
7200ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt
7260ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg
7320gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta
7380ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc
7440gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt
7500aacctataaa aataggcgta tcacgaggcc ctttcgggtc gcgcgtttcg gtgatgacgg
7560tgaaaacctc tgacacatgc agctcccgtt gacggtcaca gcttgtctgt aagcggatgc
7620cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct
7680taactatgcg gcatcagagc agattgtact gagagtgcac cataaaattg taaacgttaa
7740tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
7800cgaaatcggc aaaatccctt ataaatcaaa agaatagccc gagatagggt tgagtgttgt
7860tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
7920aaccgtctat cagggcgatg gcccactacg tgaaccatca cccaaatcaa gttttttggg
7980gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
8040acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
8100tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
8160tgcgccgcta cagggcgcgt actatggttg ctttgacgta tgcggtgtga aataccgcac
8220agatgcgtaa ggagaaaata ccgcatcagg cgccattcgc cattcaggct gcgcaactgt
8280tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt
8340gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg
8400acggccagtg aattccatgg tctcaacttt c
8431128431DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 538
12gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggcagtt
2460cagtcaccgt gacacctcct gatgggacta gcgccctggt ggaatgcgag tgtggctccg
2520gaggatccgg cacaaagatc tccgagacca tcaacaagac aaaacagttc agccagtgca
2580caaagaagga gcagtgcaga gcatatcggc tgcagaacga taagtgggtg tataattctg
2640acaaactgcc caaagcagcg ggagccacct taaaaggaaa actgcatgtc ccattcttgc
2700tggcagacgg caaatgcacc gtgcctctag caccagaacc tatgataacc ttcggtttca
2760gatcagtgtc actgaaactg caccctaaga atcccacata tctaatcacc cgccaacttg
2820ctgatgagcc tcactacacg cacgagctca tatctgaacc agctgttagg aattttaccg
2880tcaccgaaaa agggtgggag tttgtatggg gaaaccaccc gccgaaaagg ttttgggcac
2940aggaaacagc acccggaaat ccacatgggc taccgcacga ggtgataact cattattacc
3000acagataccc tatgtccacc atcctgggtt tgtcaatttg tgccgccatt gcaaccgttt
3060ccgttgcagc gtctacctgg ctgttttgca gatcaagagt tgcgtgccta actccttacc
3120ggctaacacc taacgctagg ataccatttt gtctggctgt gctttgctgc gcccgcactg
3180cccgggccga gaccacctgg gagtccttgg atcacctatg gaacaataac caacagatgt
3240tctggattca attgctgatc cctctggccg ccttgatcgt agtgactcgc ctgctcaggt
3300gcgtgtgctg tgtcgtgcct tttttagtca tggccggcgc cgcaggcgcc ggcgcctacg
3360agcacgcgac cacgatgccg agccaagcgg gaatctcgta taacactata gtcaacagag
3420caggctacgc accactccct atcagcataa caccaacaaa gatcaagctg atacctacag
3480tgaacttgga gtacgtcacc tgccactaca aaacaggaat ggattcacca gccatcaaat
3540gctgcggatc tcaggaatgc actccaactt acaggcctga tgaacagtgc aaagtcttca
3600caggggttta cccgttcatg tggggtggtg catattgctt ttgcgacact gagaacaccc
3660aagtcagcaa ggcctacgta atgaaatctg acgactgcct tgcggatcat gctgaagcat
3720ataaagcgca cacagcctca gtgcaggcgt tcctcaacat cacagtggga gaacactcta
3780ttgtgactac cgtgtatgtg aatggagaaa ctcctgtgaa tttcaatggg gtcaaaataa
3840ctgcaggtcc gctttccaca gcttggacac cctttgatcg caaaatcgtg cagtatgccg
3900gggagatcta taattatgat tttcctgagt atggggcagg acaaccagga gcatttggag
3960atatacaatc cagaacagtc tcaagctctg atctgtatgc caataccaac ctagtgctgc
4020agagacccaa agcaggagcg atccacgtgc catacactca ggcaccttcg ggttttgagc
4080aatggaagaa agataaagct ccatcattga aatttaccgc ccctttcgga tgcgaaatat
4140atacaaaccc cattcgcgcc gaaaactgtg ctgtagggtc aattccatta gcctttgaca
4200ttcccgacgc cttgttcacc agggtgtcag aaacaccgac actttcagcg gccgaatgca
4260ctcttaacga gtgcgtgtat tcttccgact ttggtgggat cgccacggtc aagtactcgg
4320ccagcaagtc aggcaagtgc gcagtccatg tgccatcagg gactgctacc ctaaaagaag
4380cagcagtcga gctaaccgag caagggtcgg cgactatcca tttctcgacc gcaaatatcc
4440acccggagtt caggctccaa atatgcacat catatgttac gtgcaaaggt gattgtcacc
4500ccccgaaaga ccatattgtg acacaccctc agtatcacgc ccaaacattt acagccgcgg
4560tgtcaaaaac cgcgtggacg tggttaacat ccctgctggg aggatcagcc gtaattatta
4620taattggctt ggtgctggct actattgtgg ccatgtacgt gctgaccaac cagaaacata
4680attaaggatc tagatctgct gtgccttcta gttgccagcc atctgttgtt tgcccctccc
4740ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt cctttcctaa taaaatgagg
4800aaattgcatc gcattgtctg agtaggtgtc attctattct ggggggtggg gtggggcagg
4860acagcaaggg ggaggattgg gaagacaata gcaggcatgc tggggatgcg gtgggctcta
4920tgggtaccca ggtgctgaag aattgacccg gttcctcctg ggccagaaag aagcaggcac
4980atccccttct ctgtgacaca ccctgtccac gcccctggtt cttagttcca gccccactca
5040taggacactc atagctcagg agggctccgc cttcaatccc acccgctaaa gtacttggag
5100cggtctctcc ctccctcatc agcccaccaa accaaaccta gcctccaaga gtgggaagaa
5160attaaagcaa gataggctat taagtgcaga gggagagaaa atgcctccaa catgtgagga
5220agtaatgaga gaaatcatag aattttaagg ccatgattta aggccatcat ggcctaagct
5280tgaaaggaga taggatcaaa gcttggcgta atcatggtca tagctgtttc ctgtgtgaaa
5340ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg
5400gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca
5460gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
5520tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
5580gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg
5640ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
5700ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg
5760acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc
5820tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc
5880ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc
5940ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
6000ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc
6060actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga
6120gttcttgaag tggtggccta actacggcta cactagaaga acagtatttg gtatctgcgc
6180tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
6240caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg
6300atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc
6360acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa
6420ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta
6480ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt
6540tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag
6600tgctgcaatg ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca
6660gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc
6720tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt
6780tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag
6840ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt
6900tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat
6960ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt
7020gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc
7080ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat
7140cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag
7200ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt
7260ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg
7320gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta
7380ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc
7440gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt
7500aacctataaa aataggcgta tcacgaggcc ctttcgggtc gcgcgtttcg gtgatgacgg
7560tgaaaacctc tgacacatgc agctcccgtt gacggtcaca gcttgtctgt aagcggatgc
7620cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct
7680taactatgcg gcatcagagc agattgtact gagagtgcac cataaaattg taaacgttaa
7740tattttgtta aaattcgcgt taaatttttg ttaaatcagc tcatttttta accaataggc
7800cgaaatcggc aaaatccctt ataaatcaaa agaatagccc gagatagggt tgagtgttgt
7860tccagtttgg aacaagagtc cactattaaa gaacgtggac tccaacgtca aagggcgaaa
7920aaccgtctat cagggcgatg gcccactacg tgaaccatca cccaaatcaa gttttttggg
7980gtcgaggtgc cgtaaagcac taaatcggaa ccctaaaggg agcccccgat ttagagcttg
8040acggggaaag ccggcgaacg tggcgagaaa ggaagggaag aaagcgaaag gagcgggcgc
8100tagggcgctg gcaagtgtag cggtcacgct gcgcgtaacc accacacccg ccgcgcttaa
8160tgcgccgcta cagggcgcgt actatggttg ctttgacgta tgcggtgtga aataccgcac
8220agatgcgtaa ggagaaaata ccgcatcagg cgccattcgc cattcaggct gcgcaactgt
8280tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa agggggatgt
8340gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg ttgtaaaacg
8400acggccagtg aattccatgg tctcaacttt c
8431133750DNAArtificial SequenceSynthetic vector VLP_CHI 512 -CHIKV VLP
13atggagttca tcccgacgca aactttctat aacagaaggt accaaccccg accctgggcc
60ccacgcccta caattcaagt aattagacct agaccacgtc cacagaggca ggctgggcaa
120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag
180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac
240ccaaagcaaa agaagcaacc accacaaaag aagccggctc aaaagaagaa gaaaccaggc
300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt caagcatgaa
360ggcaaagtga tgggctacgc atgcctggtg ggggataaag taatgaaacc agcacatgtg
420aagggaacta tcgacaatgc cgatctggct aaactggcct ttaagcggtc gtctaaatac
480gatcttgaat gtgcacagat accggtgcac atgaagtctg atgcctcgaa gtttacccac
540gagaaacccg aggggtacta taactggcat cacggagcag tgcagtattc aggaggccgg
600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg gcagaccgat cttcgacaac
660aaaggacggg tggtggccat cgtcctagga ggggccaacg aaggtgcccg cacggccctc
720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta cccctgaggg agccgaagag
780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag
840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag
900gacaacgtga tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc
960caccgccaaa gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat
1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag
1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg
1140ataaagacag atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca
1200gcggacgcgg agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg
1260accatgggac actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt
1320acggacagca gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg
1380ataggtaggg agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg
1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact
1500cctgaccgca cgctgatgac gcagcagtcc ggaggatcca acgtgaagat cacagttaat
1560gggcagacgg tgcggtacaa gtgcaactgc ggtggctcaa acgagggact gacaaccaca
1620gacaaagtga tcaataactg caaaattgat cagtgccatg ctgcagtcac taatcacaag
1680aattggcaat acaactcccc tttagtcccg cgcaacgctg aactcgggga ccgtaaagga
1740aagatccaca tcccattccc attggcaaac gtgacttgca gagtgccaaa agcaagaaac
1800cctacagtaa cttacggaaa aaaccaagtc accatgctgc tgtatcctga ccatccgaca
1860ctcttgtctt accgtaacat gggacaggaa ccaaattacc acgaggagtg ggtgacacac
1920aagaaggagg ttaccttgac cgtgcctact gagggtctgg aggtcacttg gggcaacaac
1980gaaccataca agtactggcc gcagatgtct acgaacggta ctgctcatgg tcacccacat
2040gagataatct tgtactatta tgagctgtac cccactatga ctgtagtcat tgtgtcggtg
2100gcctcgttcg tgcttctgtc gatggtgggc acagcagtgg gaatgtgtgt gtgcgcacgg
2160cgcagatgca ttacaccata tgaattaaca ccaggagcca ctgttccctt cctgctcagc
2220ctgctatgct gcgtcagaac gaccaaggcg gccacatatt acgaggctgc ggcatatcta
2280tggaacgaac agcagcccct gttctggttg caggctctta tcccgctggc cgccttgatc
2340gtcctgtgca actgtctgaa actcttgcca tgctgctgta agaccctggc ttttttagcc
2400gtaatgagca tcggtgccca cactgtgagc gcgtacgaac acgtaacagt gatcccgaac
2460acggtgggag taccgtataa gactcttgtc aacagaccgg gttacagccc catggtgttg
2520gagatggagc tacaatcagt caccttggaa ccaacactgt cacttgacta catcacgtgc
2580gagtacaaaa ctgtcatccc ctccccgtac gtgaagtgct gtggtacagc agagtgcaag
2640gacaagagcc taccagacta cagctgcaag gtctttactg gagtctaccc atttatgtgg
2700ggcggcgcct actgcttttg cgacgccgaa aatacgcaat tgagcgaggc acatgtagag
2760aaatctgaat cttgcaaaac agagtttgca tcggcctaca gagcccacac cgcatcggcg
2820tcggcgaagc tccgcgtcct ttaccaagga aacaacatta ccgtagctgc ctacgctaac
2880ggtgaccatg ccgtcacagt aaaggacgcc aagtttgtcg tgggcccaat gtcctccgcc
2940tggacacctt ttgacaacaa aatcgtggtg tacaaaggcg acgtctacaa catggactac
3000ccaccttttg gcgcaggaag accaggacaa tttggtgaca ttcaaagtcg tacaccggaa
3060agtaaagacg tttatgccaa cactcagttg gtactacaga ggccagcagc aggcacggta
3120catgtaccat actctcaggc accatctggc ttcaagtatt ggctgaagga acgaggagca
3180tcgctacagc acacggcacc gttcggttgc cagattgcga caaacccggt aagagctgta
3240aattgcgctg tggggaacat accaatttcc atcgacatac cggatgcggc ctttactagg
3300gttgtcgatg caccctctgt aacggacatg tcatgcgaag taccagcctg cactcactcc
3360tccgactttg ggggcgtcgc catcatcaaa tacacagcta gcaagaaagg taaatgtgca
3420gtacattcga tgaccaacgc cgttaccatt cgagaagccg acgtagaagt agaggggaac
3480tcccagctgc aaatatcctt ctcaacagcc ctggcaagcg ccgagtttcg cgtgcaagtg
3540tgctccacac aagtacactg cgcagccgca tgccaccctc caaaggacca catagtcaat
3600tacccagcat cacacaccac ccttggggtc caggatatat ccacaacggc aatgtcttgg
3660gtgcagaaga ttacgggagg agtaggatta attgttgctg ttgctgcctt aattttaatt
3720gtggtgctat gcgtgtcgtt tagcaggcac
3750141250PRTArtificial SequenceSynthetic vector VLP_CHI 512 -CHIKV VLP
14Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro 1
5 10 15 Arg Pro Trp Ala
Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro 20
25 30 Arg Pro Gln Arg Gln Ala Gly Gln Leu
Ala Gln Leu Ile Ser Ala Val 35 40
45 Asn Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro
Arg Arg Asn 50 55 60
Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp 65
70 75 80 Pro Lys Gln Lys
Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys 85
90 95 Lys Lys Pro Gly Arg Arg Glu Arg Met
Cys Met Lys Ile Glu Asn Asp 100 105
110 Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr
Ala Cys 115 120 125
Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 130
135 140 Asp Asn Ala Asp Leu
Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr 145 150
155 160 Asp Leu Glu Cys Ala Gln Ile Pro Val His
Met Lys Ser Asp Ala Ser 165 170
175 Lys Phe Thr His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His
Gly 180 185 190 Ala
Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly 195
200 205 Lys Pro Gly Asp Ser Gly
Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210 215
220 Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly
Ala Arg Thr Ala Leu 225 230 235
240 Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu
245 250 255 Gly Ala
Glu Glu Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala 260
265 270 Asn Thr Thr Phe Pro Cys Ser
Gln Pro Pro Cys Thr Pro Cys Cys Tyr 275 280
285 Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu
Asp Asn Val Met 290 295 300
Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305
310 315 320 His Arg Gln
Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala 325
330 335 Thr Arg Pro Tyr Leu Ala His Cys
Pro Asp Cys Gly Glu Gly His Ser 340 345
350 Cys His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu
Ala Thr Asp 355 360 365
Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370
375 380 Asp Ser His Asp
Trp Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro 385 390
395 400 Ala Asp Ala Glu Arg Ala Gly Leu Leu
Val Arg Thr Ser Ala Pro Cys 405 410
415 Thr Ile Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys
Pro Lys 420 425 430
Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys Ile Ser His
435 440 445 Thr Cys Thr His
Pro Phe His His Glu Pro Pro Val Ile Gly Arg Glu 450
455 460 Arg Phe His Ser Arg Pro Gln His
Gly Lys Glu Leu Pro Cys Ser Thr 465 470
475 480 Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu Glu Ile
Glu Val His Met 485 490
495 Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Gly
500 505 510 Ser Asn Val
Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys 515
520 525 Asn Cys Gly Gly Ser Asn Glu Gly
Leu Thr Thr Thr Asp Lys Val Ile 530 535
540 Asn Asn Cys Lys Ile Asp Gln Cys His Ala Ala Val Thr
Asn His Lys 545 550 555
560 Asn Trp Gln Tyr Asn Ser Pro Leu Val Pro Arg Asn Ala Glu Leu Gly
565 570 575 Asp Arg Lys Gly
Lys Ile His Ile Pro Phe Pro Leu Ala Asn Val Thr 580
585 590 Cys Arg Val Pro Lys Ala Arg Asn Pro
Thr Val Thr Tyr Gly Lys Asn 595 600
605 Gln Val Thr Met Leu Leu Tyr Pro Asp His Pro Thr Leu Leu
Ser Tyr 610 615 620
Arg Asn Met Gly Gln Glu Pro Asn Tyr His Glu Glu Trp Val Thr His 625
630 635 640 Lys Lys Glu Val Thr
Leu Thr Val Pro Thr Glu Gly Leu Glu Val Thr 645
650 655 Trp Gly Asn Asn Glu Pro Tyr Lys Tyr Trp
Pro Gln Met Ser Thr Asn 660 665
670 Gly Thr Ala His Gly His Pro His Glu Ile Ile Leu Tyr Tyr Tyr
Glu 675 680 685 Leu
Tyr Pro Thr Met Thr Val Val Ile Val Ser Val Ala Ser Phe Val 690
695 700 Leu Leu Ser Met Val Gly
Thr Ala Val Gly Met Cys Val Cys Ala Arg 705 710
715 720 Arg Arg Cys Ile Thr Pro Tyr Glu Leu Thr Pro
Gly Ala Thr Val Pro 725 730
735 Phe Leu Leu Ser Leu Leu Cys Cys Val Arg Thr Thr Lys Ala Ala Thr
740 745 750 Tyr Tyr
Glu Ala Ala Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe 755
760 765 Trp Leu Gln Ala Leu Ile Pro
Leu Ala Ala Leu Ile Val Leu Cys Asn 770 775
780 Cys Leu Lys Leu Leu Pro Cys Cys Cys Lys Thr Leu
Ala Phe Leu Ala 785 790 795
800 Val Met Ser Ile Gly Ala His Thr Val Ser Ala Tyr Glu His Val Thr
805 810 815 Val Ile Pro
Asn Thr Val Gly Val Pro Tyr Lys Thr Leu Val Asn Arg 820
825 830 Pro Gly Tyr Ser Pro Met Val Leu
Glu Met Glu Leu Gln Ser Val Thr 835 840
845 Leu Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys Glu
Tyr Lys Thr 850 855 860
Val Ile Pro Ser Pro Tyr Val Lys Cys Cys Gly Thr Ala Glu Cys Lys 865
870 875 880 Asp Lys Ser Leu
Pro Asp Tyr Ser Cys Lys Val Phe Thr Gly Val Tyr 885
890 895 Pro Phe Met Trp Gly Gly Ala Tyr Cys
Phe Cys Asp Ala Glu Asn Thr 900 905
910 Gln Leu Ser Glu Ala His Val Glu Lys Ser Glu Ser Cys Lys
Thr Glu 915 920 925
Phe Ala Ser Ala Tyr Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu 930
935 940 Arg Val Leu Tyr Gln
Gly Asn Asn Ile Thr Val Ala Ala Tyr Ala Asn 945 950
955 960 Gly Asp His Ala Val Thr Val Lys Asp Ala
Lys Phe Val Val Gly Pro 965 970
975 Met Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile Val Val Tyr
Lys 980 985 990 Gly
Asp Val Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg Pro 995
1000 1005 Gly Gln Phe Gly
Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp 1010
1015 1020 Val Tyr Ala Asn Thr Gln Leu Val
Leu Gln Arg Pro Ala Ala Gly 1025 1030
1035 Thr Val His Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe
Lys Tyr 1040 1045 1050
Trp Leu Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe 1055
1060 1065 Gly Cys Gln Ile Ala
Thr Asn Pro Val Arg Ala Val Asn Cys Ala 1070 1075
1080 Val Gly Asn Ile Pro Ile Ser Ile Asp Ile
Pro Asp Ala Ala Phe 1085 1090 1095
Thr Arg Val Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu
1100 1105 1110 Val Pro
Ala Cys Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile 1115
1120 1125 Ile Lys Tyr Thr Ala Ser Lys
Lys Gly Lys Cys Ala Val His Ser 1130 1135
1140 Met Thr Asn Ala Val Thr Ile Arg Glu Ala Asp Val
Glu Val Glu 1145 1150 1155
Gly Asn Ser Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser 1160
1165 1170 Ala Glu Phe Arg Val
Gln Val Cys Ser Thr Gln Val His Cys Ala 1175 1180
1185 Ala Ala Cys His Pro Pro Lys Asp His Ile
Val Asn Tyr Pro Ala 1190 1195 1200
Ser His Thr Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met
1205 1210 1215 Ser Trp
Val Gln Lys Ile Thr Gly Gly Val Gly Leu Ile Val Ala 1220
1225 1230 Val Ala Ala Leu Ile Leu Ile
Val Val Leu Cys Val Ser Phe Ser 1235 1240
1245 Arg His 1250153756DNAArtificial
SequenceSynthetic vector VLP_CHI 532 -CHIKV VLP 15atggagttca tcccgacgca
aactttctat aacagaaggt accaaccccg accctgggcc 60ccacgcccta caattcaagt
aattagacct agaccacgtc cacagaggca ggctgggcaa 120ctcgcccagc tgatctccgc
agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag 180cctcgcagaa atcggaaaaa
caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac 240ccaaagcaaa agaagcaacc
accacaaaag aagccggctc aaaagaagaa gaaaccaggc 300cgtagggaga gaatgtgcat
gaaaattgaa aatgattgca tcttcgaagt caagcatgaa 360ggcaaagtga tgggctacgc
atgcctggtg ggggataaag taatgaaacc agcacatgtg 420aagggaacta tcgacaatgc
cgatctggct aaactggcct ttaagcggtc gtctaaatac 480gatcttgaat gtgcacagat
accggtgcac atgaagtctg atgcctcgaa gtttacccac 540gagaaacccg aggggtacta
taactggcat cacggagcag tgcagtattc aggaggccgg 600ttcactatcc cgacgggtgc
aggcaagccg ggagacagcg gcagaccgat cttcgacaac 660aaaggacggg tggtggccat
cgtcctagga ggggccaacg aaggtgcccg cacggccctc 720tccgtggtga cgtggaacaa
agacatcgtc acaaaaatta cccctgaggg agccgaagag 780tggagcctcg ccctcccggt
cttgtgcctg ttggcaaaca ctacattccc ctgctctcag 840ccgccttgca caccctgctg
ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag 900gacaacgtga tgagacccgg
atactaccag ctactaaaag catcgctgac ttgctctccc 960caccgccaaa gacgcagtac
taaggacaat tttaatgtct ataaagccac aagaccatat 1020ctagctcatt gtcctgactg
cggagaaggg cattcgtgcc acagccctat cgcattggag 1080cgcatcagaa atgaagcaac
ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg 1140ataaagacag atgacagcca
cgattggacc aagctgcgct atatggatag ccatacgcca 1200gcggacgcgg agcgagccgg
attgcttgta aggacttcag caccgtgcac gatcaccggg 1260accatgggac actttattct
cgcccgatgc ccgaaaggag agacgctgac agtgggattt 1320acggacagca gaaagatcag
ccacacatgc acacacccgt tccatcatga accacctgtg 1380ataggtaggg agaggttcca
ctctcgacca caacatggta aagagttacc ttgcagcacg 1440tacgtgcaga gcaccgctgc
cactgctgag gagatagagg tgcatatgcc cccagatact 1500cctgaccgca cgctgatgac
gcagcagtct ggcaacgtga agatcacagt taatgggcag 1560acggtgcggt acaagtgcaa
ctgcggtggc tccggaagtg gatccaacga gggactgaca 1620accacagaca aagtgatcaa
taactgcaaa attgatcagt gccatgctgc agtcactaat 1680cacaagaatt ggcaatacaa
ctccccttta gtcccgcgca acgctgaact cggggaccgt 1740aaaggaaaga tccacatccc
attcccattg gcaaacgtga cttgcagagt gccaaaagca 1800agaaacccta cagtaactta
cggaaaaaac caagtcacca tgctgctgta tcctgaccat 1860ccgacactct tgtcttaccg
taacatggga caggaaccaa attaccacga ggagtgggtg 1920acacacaaga aggaggttac
cttgaccgtg cctactgagg gtctggaggt cacttggggc 1980aacaacgaac catacaagta
ctggccgcag atgtctacga acggtactgc tcatggtcac 2040ccacatgaga taatcttgta
ctattatgag ctgtacccca ctatgactgt agtcattgtg 2100tcggtggcct cgttcgtgct
tctgtcgatg gtgggcacag cagtgggaat gtgtgtgtgc 2160gcacggcgca gatgcattac
accatatgaa ttaacaccag gagccactgt tcccttcctg 2220ctcagcctgc tatgctgcgt
cagaacgacc aaggcggcca catattacga ggctgcggca 2280tatctatgga acgaacagca
gcccctgttc tggttgcagg ctcttatccc gctggccgcc 2340ttgatcgtcc tgtgcaactg
tctgaaactc ttgccatgct gctgtaagac cctggctttt 2400ttagccgtaa tgagcatcgg
tgcccacact gtgagcgcgt acgaacacgt aacagtgatc 2460ccgaacacgg tgggagtacc
gtataagact cttgtcaaca gaccgggtta cagccccatg 2520gtgttggaga tggagctaca
atcagtcacc ttggaaccaa cactgtcact tgactacatc 2580acgtgcgagt acaaaactgt
catcccctcc ccgtacgtga agtgctgtgg tacagcagag 2640tgcaaggaca agagcctacc
agactacagc tgcaaggtct ttactggagt ctacccattt 2700atgtggggcg gcgcctactg
cttttgcgac gccgaaaata cgcaattgag cgaggcacat 2760gtagagaaat ctgaatcttg
caaaacagag tttgcatcgg cctacagagc ccacaccgca 2820tcggcgtcgg cgaagctccg
cgtcctttac caaggaaaca acattaccgt agctgcctac 2880gctaacggtg accatgccgt
cacagtaaag gacgccaagt ttgtcgtggg cccaatgtcc 2940tccgcctgga caccttttga
caacaaaatc gtggtgtaca aaggcgacgt ctacaacatg 3000gactacccac cttttggcgc
aggaagacca ggacaatttg gtgacattca aagtcgtaca 3060ccggaaagta aagacgttta
tgccaacact cagttggtac tacagaggcc agcagcaggc 3120acggtacatg taccatactc
tcaggcacca tctggcttca agtattggct gaaggaacga 3180ggagcatcgc tacagcacac
ggcaccgttc ggttgccaga ttgcgacaaa cccggtaaga 3240gctgtaaatt gcgctgtggg
gaacatacca atttccatcg acataccgga tgcggccttt 3300actagggttg tcgatgcacc
ctctgtaacg gacatgtcat gcgaagtacc agcctgcact 3360cactcctccg actttggggg
cgtcgccatc atcaaataca cagctagcaa gaaaggtaaa 3420tgtgcagtac attcgatgac
caacgccgtt accattcgag aagccgacgt agaagtagag 3480gggaactccc agctgcaaat
atccttctca acagccctgg caagcgccga gtttcgcgtg 3540caagtgtgct ccacacaagt
acactgcgca gccgcatgcc accctccaaa ggaccacata 3600gtcaattacc cagcatcaca
caccaccctt ggggtccagg atatatccac aacggcaatg 3660tcttgggtgc agaagattac
gggaggagta ggattaattg ttgctgttgc tgccttaatt 3720ttaattgtgg tgctatgcgt
gtcgtttagc aggcac 3756161252PRTArtificial
SequenceSynthetic vector VLP_CHI 532 -CHIKV VLP 16Met Glu Phe Ile Pro Thr
Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro 1 5
10 15 Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val
Ile Arg Pro Arg Pro 20 25
30 Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala
Val 35 40 45 Asn
Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60 Arg Lys Asn Lys Lys Gln
Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp 65 70
75 80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys
Pro Ala Gln Lys Lys 85 90
95 Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp
100 105 110 Cys Ile
Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys 115
120 125 Leu Val Gly Asp Lys Val Met
Lys Pro Ala His Val Lys Gly Thr Ile 130 135
140 Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg
Ser Ser Lys Tyr 145 150 155
160 Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175 Lys Phe Thr
His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190 Ala Val Gln Tyr Ser Gly Gly Arg
Phe Thr Ile Pro Thr Gly Ala Gly 195 200
205 Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys
Gly Arg Val 210 215 220
Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225
230 235 240 Ser Val Val Thr
Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu 245
250 255 Gly Ala Glu Glu Trp Ser Leu Ala Leu
Pro Val Leu Cys Leu Leu Ala 260 265
270 Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys
Cys Tyr 275 280 285
Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300 Arg Pro Gly Tyr Tyr
Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305 310
315 320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn
Phe Asn Val Tyr Lys Ala 325 330
335 Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His
Ser 340 345 350 Cys
His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365 Gly Thr Leu Lys Ile Gln
Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370 375
380 Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met
Asp Ser His Thr Pro 385 390 395
400 Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys
405 410 415 Thr Ile
Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430 Gly Glu Thr Leu Thr Val Gly
Phe Thr Asp Ser Arg Lys Ile Ser His 435 440
445 Thr Cys Thr His Pro Phe His His Glu Pro Pro Val
Ile Gly Arg Glu 450 455 460
Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465
470 475 480 Tyr Val Gln
Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met 485
490 495 Pro Pro Asp Thr Pro Asp Arg Thr
Leu Met Thr Gln Gln Ser Gly Asn 500 505
510 Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys
Cys Asn Cys 515 520 525
Gly Gly Ser Gly Ser Gly Ser Asn Glu Gly Leu Thr Thr Thr Asp Lys 530
535 540 Val Ile Asn Asn
Cys Lys Ile Asp Gln Cys His Ala Ala Val Thr Asn 545 550
555 560 His Lys Asn Trp Gln Tyr Asn Ser Pro
Leu Val Pro Arg Asn Ala Glu 565 570
575 Leu Gly Asp Arg Lys Gly Lys Ile His Ile Pro Phe Pro Leu
Ala Asn 580 585 590
Val Thr Cys Arg Val Pro Lys Ala Arg Asn Pro Thr Val Thr Tyr Gly
595 600 605 Lys Asn Gln Val
Thr Met Leu Leu Tyr Pro Asp His Pro Thr Leu Leu 610
615 620 Ser Tyr Arg Asn Met Gly Gln Glu
Pro Asn Tyr His Glu Glu Trp Val 625 630
635 640 Thr His Lys Lys Glu Val Thr Leu Thr Val Pro Thr
Glu Gly Leu Glu 645 650
655 Val Thr Trp Gly Asn Asn Glu Pro Tyr Lys Tyr Trp Pro Gln Met Ser
660 665 670 Thr Asn Gly
Thr Ala His Gly His Pro His Glu Ile Ile Leu Tyr Tyr 675
680 685 Tyr Glu Leu Tyr Pro Thr Met Thr
Val Val Ile Val Ser Val Ala Ser 690 695
700 Phe Val Leu Leu Ser Met Val Gly Thr Ala Val Gly Met
Cys Val Cys 705 710 715
720 Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly Ala Thr
725 730 735 Val Pro Phe Leu
Leu Ser Leu Leu Cys Cys Val Arg Thr Thr Lys Ala 740
745 750 Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr
Leu Trp Asn Glu Gln Gln Pro 755 760
765 Leu Phe Trp Leu Gln Ala Leu Ile Pro Leu Ala Ala Leu Ile
Val Leu 770 775 780
Cys Asn Cys Leu Lys Leu Leu Pro Cys Cys Cys Lys Thr Leu Ala Phe 785
790 795 800 Leu Ala Val Met Ser
Ile Gly Ala His Thr Val Ser Ala Tyr Glu His 805
810 815 Val Thr Val Ile Pro Asn Thr Val Gly Val
Pro Tyr Lys Thr Leu Val 820 825
830 Asn Arg Pro Gly Tyr Ser Pro Met Val Leu Glu Met Glu Leu Gln
Ser 835 840 845 Val
Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys Glu Tyr 850
855 860 Lys Thr Val Ile Pro Ser
Pro Tyr Val Lys Cys Cys Gly Thr Ala Glu 865 870
875 880 Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser Cys
Lys Val Phe Thr Gly 885 890
895 Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp Ala Glu
900 905 910 Asn Thr
Gln Leu Ser Glu Ala His Val Glu Lys Ser Glu Ser Cys Lys 915
920 925 Thr Glu Phe Ala Ser Ala Tyr
Arg Ala His Thr Ala Ser Ala Ser Ala 930 935
940 Lys Leu Arg Val Leu Tyr Gln Gly Asn Asn Ile Thr
Val Ala Ala Tyr 945 950 955
960 Ala Asn Gly Asp His Ala Val Thr Val Lys Asp Ala Lys Phe Val Val
965 970 975 Gly Pro Met
Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile Val Val 980
985 990 Tyr Lys Gly Asp Val Tyr Asn Met
Asp Tyr Pro Pro Phe Gly Ala Gly 995 1000
1005 Arg Pro Gly Gln Phe Gly Asp Ile Gln Ser Arg
Thr Pro Glu Ser 1010 1015 1020
Lys Asp Val Tyr Ala Asn Thr Gln Leu Val Leu Gln Arg Pro Ala
1025 1030 1035 Ala Gly Thr
Val His Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe 1040
1045 1050 Lys Tyr Trp Leu Lys Glu Arg Gly
Ala Ser Leu Gln His Thr Ala 1055 1060
1065 Pro Phe Gly Cys Gln Ile Ala Thr Asn Pro Val Arg Ala
Val Asn 1070 1075 1080
Cys Ala Val Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala 1085
1090 1095 Ala Phe Thr Arg Val
Val Asp Ala Pro Ser Val Thr Asp Met Ser 1100 1105
1110 Cys Glu Val Pro Ala Cys Thr His Ser Ser
Asp Phe Gly Gly Val 1115 1120 1125
Ala Ile Ile Lys Tyr Thr Ala Ser Lys Lys Gly Lys Cys Ala Val
1130 1135 1140 His Ser
Met Thr Asn Ala Val Thr Ile Arg Glu Ala Asp Val Glu 1145
1150 1155 Val Glu Gly Asn Ser Gln Leu
Gln Ile Ser Phe Ser Thr Ala Leu 1160 1165
1170 Ala Ser Ala Glu Phe Arg Val Gln Val Cys Ser Thr
Gln Val His 1175 1180 1185
Cys Ala Ala Ala Cys His Pro Pro Lys Asp His Ile Val Asn Tyr 1190
1195 1200 Pro Ala Ser His Thr
Thr Leu Gly Val Gln Asp Ile Ser Thr Thr 1205 1210
1215 Ala Met Ser Trp Val Gln Lys Ile Thr Gly
Gly Val Gly Leu Ile 1220 1225 1230
Val Ala Val Ala Ala Leu Ile Leu Ile Val Val Leu Cys Val Ser
1235 1240 1245 Phe Ser
Arg His 1250 173777DNAArtificial SequenceSynthetic vector
VLP_VEEV VLP 518 -VEEV VLP 17atgttcccgt tccagccaat gtatccgatg cagccaatgc
cctatcgcaa cccgttcgcg 60gccccgcgca ggccctggtt ccccagaacc gacccttttc
tggcgatgca ggtgcaggaa 120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc
gggacgcgcc acctgagggg 180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac
agaaaggggg aggccaaggg 240aagaagaaga agaaccaagg gaagaagaag gctaagacag
ggccgcctaa tccgaaggca 300cagaatggaa acaagaagaa gaccaacaag aaaccaggca
agagacagcg catggtcatg 360aaattggaat ctgacaagac gttcccaatc atgttggaag
ggaagataaa cggctacgct 420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg
aaggcaagat cgacaacgac 480gttctggccg cgcttaagac gaagaaagca tccaaatacg
atcttgagta tgcagatgtg 540ccacagaaca tgcgggccga tacattcaaa tacacccatg
agaaacccca aggctattac 600agctggcatc atggagcagt ccaatatgaa aatgggcgtt
tcacggtgcc gaaaggagtt 660ggggccaagg gagacagcgg acgacccatt ctggataacc
agggacgggt ggtcgctatt 720gtgctgggag gtgtgaatga aggatctagg acagcccttt
cagtcgtcat gtggaacgag 780aagggagtta ccgtgaagta tactccagag aactgcgagc
aatggtcact agtgaccacc 840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac
caccaatttg ctacgacaga 900aaaccagcag agactttggc catgctcagc gttaacgttg
acaacccggg ctacgatgag 960ctgctggaag cagctgttaa gtgccccgga aggaaaagga
gatccaccga ggagctgttt 1020aatgagtata agctaacgcg cccttacatg gccagatgca
tcagatgtgc agttgggagc 1080tgccatagtc caatagcaat cgaggcagta aagagcgacg
ggcacgacgg ttatgttaga 1140cttcagactt cctcgcagta tggcctggat tcctccggca
acttaaaggg caggaccatg 1200cggtatgaca tgcacgggac cattaaagag ataccactac
atcaagtgtc actctataca 1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc
tgcttgccag gtgcccggca 1320ggggactcca tcaccatgga atttaagaaa gattccgtca
gacactcctg ctcggtgccg 1380tatgaagtga aatttaatcc tgtaggcaga gaactctata
ctcatccccc agaacacgga 1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga
acagaggagc ttatgtcgag 1500atgcacctcc cgggctcaga agtggacagc agtttggttt
ccttgagcgg ctccggagga 1560tccagttcag tcaccgtgac acctcctgat gggactagcg
ccctggtgga atgcgagtgt 1620ggcggcacaa agatctccga gaccatcaac aagacaaaac
agttcagcca gtgcacaaag 1680aaggagcagt gcagagcata tcggctgcag aacgataagt
gggtgtataa ttctgacaaa 1740ctgcccaaag cagcgggagc caccttaaaa ggaaaactgc
atgtcccatt cttgctggca 1800gacggcaaat gcaccgtgcc tctagcacca gaacctatga
taaccttcgg tttcagatca 1860gtgtcactga aactgcaccc taagaatccc acatatctaa
tcacccgcca acttgctgat 1920gagcctcact acacgcacga gctcatatct gaaccagctg
ttaggaattt taccgtcacc 1980gaaaaagggt gggagtttgt atggggaaac cacccgccga
aaaggttttg ggcacaggaa 2040acagcacccg gaaatccaca tgggctaccg cacgaggtga
taactcatta ttaccacaga 2100taccctatgt ccaccatcct gggtttgtca atttgtgccg
ccattgcaac cgtttccgtt 2160gcagcgtcta cctggctgtt ttgcagatca agagttgcgt
gcctaactcc ttaccggcta 2220acacctaacg ctaggatacc attttgtctg gctgtgcttt
gctgcgcccg cactgcccgg 2280gccgagacca cctgggagtc cttggatcac ctatggaaca
ataaccaaca gatgttctgg 2340attcaattgc tgatccctct ggccgccttg atcgtagtga
ctcgcctgct caggtgcgtg 2400tgctgtgtcg tgcctttttt agtcatggcc ggcgccgcag
gcgccggcgc ctacgagcac 2460gcgaccacga tgccgagcca agcgggaatc tcgtataaca
ctatagtcaa cagagcaggc 2520tacgcaccac tccctatcag cataacacca acaaagatca
agctgatacc tacagtgaac 2580ttggagtacg tcacctgcca ctacaaaaca ggaatggatt
caccagccat caaatgctgc 2640ggatctcagg aatgcactcc aacttacagg cctgatgaac
agtgcaaagt cttcacaggg 2700gtttacccgt tcatgtgggg tggtgcatat tgcttttgcg
acactgagaa cacccaagtc 2760agcaaggcct acgtaatgaa atctgacgac tgccttgcgg
atcatgctga agcatataaa 2820gcgcacacag cctcagtgca ggcgttcctc aacatcacag
tgggagaaca ctctattgtg 2880actaccgtgt atgtgaatgg agaaactcct gtgaatttca
atggggtcaa aataactgca 2940ggtccgcttt ccacagcttg gacacccttt gatcgcaaaa
tcgtgcagta tgccggggag 3000atctataatt atgattttcc tgagtatggg gcaggacaac
caggagcatt tggagatata 3060caatccagaa cagtctcaag ctctgatctg tatgccaata
ccaacctagt gctgcagaga 3120cccaaagcag gagcgatcca cgtgccatac actcaggcac
cttcgggttt tgagcaatgg 3180aagaaagata aagctccatc attgaaattt accgcccctt
tcggatgcga aatatataca 3240aaccccattc gcgccgaaaa ctgtgctgta gggtcaattc
cattagcctt tgacattccc 3300gacgccttgt tcaccagggt gtcagaaaca ccgacacttt
cagcggccga atgcactctt 3360aacgagtgcg tgtattcttc cgactttggt gggatcgcca
cggtcaagta ctcggccagc 3420aagtcaggca agtgcgcagt ccatgtgcca tcagggactg
ctaccctaaa agaagcagca 3480gtcgagctaa ccgagcaagg gtcggcgact atccatttct
cgaccgcaaa tatccacccg 3540gagttcaggc tccaaatatg cacatcatat gttacgtgca
aaggtgattg tcaccccccg 3600aaagaccata ttgtgacaca ccctcagtat cacgcccaaa
catttacagc cgcggtgtca 3660aaaaccgcgt ggacgtggtt aacatccctg ctgggaggat
cagccgtaat tattataatt 3720ggcttggtgc tggctactat tgtggccatg tacgtgctga
ccaaccagaa acataat 3777181259PRTArtificial SequenceSynthetic vector
VLP_VEEV VLP 518 -VEEV VLP 18Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln
Pro Met Pro Tyr Arg 1 5 10
15 Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro
20 25 30 Phe Leu
Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn Leu 35
40 45 Thr Phe Lys Gln Arg Arg Asp
Ala Pro Pro Glu Gly Pro Ser Ala Asn 50 55
60 Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly
Gly Gly Gln Gly 65 70 75
80 Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro
85 90 95 Asn Pro Lys
Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110 Gly Lys Arg Gln Arg Met Val Met
Lys Leu Glu Ser Asp Lys Thr Phe 115 120
125 Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys
Val Val Gly 130 135 140
Gly Lys Leu Phe Arg Pro Met His Val Glu Gly Lys Ile Asp Asn Asp 145
150 155 160 Val Leu Ala Ala
Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu 165
170 175 Tyr Ala Asp Val Pro Gln Asn Met Arg
Ala Asp Thr Phe Lys Tyr Thr 180 185
190 His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala
Val Gln 195 200 205
Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220 Asp Ser Gly Arg Pro
Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile 225 230
235 240 Val Leu Gly Gly Val Asn Glu Gly Ser Arg
Thr Ala Leu Ser Val Val 245 250
255 Met Trp Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn
Cys 260 265 270 Glu
Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala Asn Val Thr 275
280 285 Phe Pro Cys Ala Gln Pro
Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290 295
300 Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn
Pro Gly Tyr Asp Glu 305 310 315
320 Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr
325 330 335 Glu Glu
Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg 340
345 350 Cys Ile Arg Cys Ala Val Gly
Ser Cys His Ser Pro Ile Ala Ile Glu 355 360
365 Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg
Leu Gln Thr Ser 370 375 380
Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met 385
390 395 400 Arg Tyr Asp
Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val 405
410 415 Ser Leu Tyr Thr Ser Arg Pro Cys
His Ile Val Asp Gly His Gly Tyr 420 425
430 Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr
Met Glu Phe 435 440 445
Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460 Phe Asn Pro Val
Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly 465 470
475 480 Val Glu Gln Ala Cys Gln Val Tyr Ala
His Asp Ala Gln Asn Arg Gly 485 490
495 Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val Asp Ser
Ser Leu 500 505 510
Val Ser Leu Ser Gly Ser Gly Gly Ser Ser Ser Val Thr Val Thr Pro
515 520 525 Pro Asp Gly Thr
Ser Ala Leu Val Glu Cys Glu Cys Gly Gly Thr Lys 530
535 540 Ile Ser Glu Thr Ile Asn Lys Thr
Lys Gln Phe Ser Gln Cys Thr Lys 545 550
555 560 Lys Glu Gln Cys Arg Ala Tyr Arg Leu Gln Asn Asp
Lys Trp Val Tyr 565 570
575 Asn Ser Asp Lys Leu Pro Lys Ala Ala Gly Ala Thr Leu Lys Gly Lys
580 585 590 Leu His Val
Pro Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu 595
600 605 Ala Pro Glu Pro Met Ile Thr Phe
Gly Phe Arg Ser Val Ser Leu Lys 610 615
620 Leu His Pro Lys Asn Pro Thr Tyr Leu Ile Thr Arg Gln
Leu Ala Asp 625 630 635
640 Glu Pro His Tyr Thr His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn
645 650 655 Phe Thr Val Thr
Glu Lys Gly Trp Glu Phe Val Trp Gly Asn His Pro 660
665 670 Pro Lys Arg Phe Trp Ala Gln Glu Thr
Ala Pro Gly Asn Pro His Gly 675 680
685 Leu Pro His Glu Val Ile Thr His Tyr Tyr His Arg Tyr Pro
Met Ser 690 695 700
Thr Ile Leu Gly Leu Ser Ile Cys Ala Ala Ile Ala Thr Val Ser Val 705
710 715 720 Ala Ala Ser Thr Trp
Leu Phe Cys Arg Ser Arg Val Ala Cys Leu Thr 725
730 735 Pro Tyr Arg Leu Thr Pro Asn Ala Arg Ile
Pro Phe Cys Leu Ala Val 740 745
750 Leu Cys Cys Ala Arg Thr Ala Arg Ala Glu Thr Thr Trp Glu Ser
Leu 755 760 765 Asp
His Leu Trp Asn Asn Asn Gln Gln Met Phe Trp Ile Gln Leu Leu 770
775 780 Ile Pro Leu Ala Ala Leu
Ile Val Val Thr Arg Leu Leu Arg Cys Val 785 790
795 800 Cys Cys Val Val Pro Phe Leu Val Met Ala Gly
Ala Ala Gly Ala Gly 805 810
815 Ala Tyr Glu His Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr
820 825 830 Asn Thr
Ile Val Asn Arg Ala Gly Tyr Ala Pro Leu Pro Ile Ser Ile 835
840 845 Thr Pro Thr Lys Ile Lys Leu
Ile Pro Thr Val Asn Leu Glu Tyr Val 850 855
860 Thr Cys His Tyr Lys Thr Gly Met Asp Ser Pro Ala
Ile Lys Cys Cys 865 870 875
880 Gly Ser Gln Glu Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys Lys
885 890 895 Val Phe Thr
Gly Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe 900
905 910 Cys Asp Thr Glu Asn Thr Gln Val
Ser Lys Ala Tyr Val Met Lys Ser 915 920
925 Asp Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala
His Thr Ala 930 935 940
Ser Val Gln Ala Phe Leu Asn Ile Thr Val Gly Glu His Ser Ile Val 945
950 955 960 Thr Thr Val Tyr
Val Asn Gly Glu Thr Pro Val Asn Phe Asn Gly Val 965
970 975 Lys Ile Thr Ala Gly Pro Leu Ser Thr
Ala Trp Thr Pro Phe Asp Arg 980 985
990 Lys Ile Val Gln Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp
Phe Pro Glu 995 1000 1005
Tyr Gly Ala Gly Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg
1010 1015 1020 Thr Val Ser
Ser Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu 1025
1030 1035 Gln Arg Pro Lys Ala Gly Ala Ile
His Val Pro Tyr Thr Gln Ala 1040 1045
1050 Pro Ser Gly Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro
Ser Leu 1055 1060 1065
Lys Phe Thr Ala Pro Phe Gly Cys Glu Ile Tyr Thr Asn Pro Ile 1070
1075 1080 Arg Ala Glu Asn Cys
Ala Val Gly Ser Ile Pro Leu Ala Phe Asp 1085 1090
1095 Ile Pro Asp Ala Leu Phe Thr Arg Val Ser
Glu Thr Pro Thr Leu 1100 1105 1110
Ser Ala Ala Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp
1115 1120 1125 Phe Gly
Gly Ile Ala Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly 1130
1135 1140 Lys Cys Ala Val His Val Pro
Ser Gly Thr Ala Thr Leu Lys Glu 1145 1150
1155 Ala Ala Val Glu Leu Thr Glu Gln Gly Ser Ala Thr
Ile His Phe 1160 1165 1170
Ser Thr Ala Asn Ile His Pro Glu Phe Arg Leu Gln Ile Cys Thr 1175
1180 1185 Ser Tyr Val Thr Cys
Lys Gly Asp Cys His Pro Pro Lys Asp His 1190 1195
1200 Ile Val Thr His Pro Gln Tyr His Ala Gln
Thr Phe Thr Ala Ala 1205 1210 1215
Val Ser Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly
1220 1225 1230 Ser Ala
Val Ile Ile Ile Ile Gly Leu Val Leu Ala Thr Ile Val 1235
1240 1245 Ala Met Tyr Val Leu Thr Asn
Gln Lys His Asn 1250 1255
193777DNAArtificial SequenceSynthetic vector VLP_VEEV VLP 519 -VEEV VLP
19atgttcccgt tccagccaat gtatccgatg cagccaatgc cctatcgcaa cccgttcgcg
60gccccgcgca ggccctggtt ccccagaacc gacccttttc tggcgatgca ggtgcaggaa
120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc acctgagggg
180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg aggccaaggg
240aagaagaaga agaaccaagg gaagaagaag gctaagacag ggccgcctaa tccgaaggca
300cagaatggaa acaagaagaa gaccaacaag aaaccaggca agagacagcg catggtcatg
360aaattggaat ctgacaagac gttcccaatc atgttggaag ggaagataaa cggctacgct
420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg aaggcaagat cgacaacgac
480gttctggccg cgcttaagac gaagaaagca tccaaatacg atcttgagta tgcagatgtg
540ccacagaaca tgcgggccga tacattcaaa tacacccatg agaaacccca aggctattac
600agctggcatc atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc gaaaggagtt
660ggggccaagg gagacagcgg acgacccatt ctggataacc agggacgggt ggtcgctatt
720gtgctgggag gtgtgaatga aggatctagg acagcccttt cagtcgtcat gtggaacgag
780aagggagtta ccgtgaagta tactccagag aactgcgagc aatggtcact agtgaccacc
840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac caccaatttg ctacgacaga
900aaaccagcag agactttggc catgctcagc gttaacgttg acaacccggg ctacgatgag
960ctgctggaag cagctgttaa gtgccccgga aggaaaagga gatccaccga ggagctgttt
1020aatgagtata agctaacgcg cccttacatg gccagatgca tcagatgtgc agttgggagc
1080tgccatagtc caatagcaat cgaggcagta aagagcgacg ggcacgacgg ttatgttaga
1140cttcagactt cctcgcagta tggcctggat tcctccggca acttaaaggg caggaccatg
1200cggtatgaca tgcacgggac cattaaagag ataccactac atcaagtgtc actctataca
1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc tgcttgccag gtgcccggca
1320ggggactcca tcaccatgga atttaagaaa gattccgtca gacactcctg ctcggtgccg
1380tatgaagtga aatttaatcc tgtaggcaga gaactctata ctcatccccc agaacacgga
1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga acagaggagc ttatgtcgag
1500atgcacctcc cgggctcaga agtggacagc agtttggttt ccttgagcgg cagttccgga
1560ggatcctcag tcaccgtgac acctcctgat gggactagcg ccctggtgga atgcgagtgt
1620ggcggcacaa agatctccga gaccatcaac aagacaaaac agttcagcca gtgcacaaag
1680aaggagcagt gcagagcata tcggctgcag aacgataagt gggtgtataa ttctgacaaa
1740ctgcccaaag cagcgggagc caccttaaaa ggaaaactgc atgtcccatt cttgctggca
1800gacggcaaat gcaccgtgcc tctagcacca gaacctatga taaccttcgg tttcagatca
1860gtgtcactga aactgcaccc taagaatccc acatatctaa tcacccgcca acttgctgat
1920gagcctcact acacgcacga gctcatatct gaaccagctg ttaggaattt taccgtcacc
1980gaaaaagggt gggagtttgt atggggaaac cacccgccga aaaggttttg ggcacaggaa
2040acagcacccg gaaatccaca tgggctaccg cacgaggtga taactcatta ttaccacaga
2100taccctatgt ccaccatcct gggtttgtca atttgtgccg ccattgcaac cgtttccgtt
2160gcagcgtcta cctggctgtt ttgcagatca agagttgcgt gcctaactcc ttaccggcta
2220acacctaacg ctaggatacc attttgtctg gctgtgcttt gctgcgcccg cactgcccgg
2280gccgagacca cctgggagtc cttggatcac ctatggaaca ataaccaaca gatgttctgg
2340attcaattgc tgatccctct ggccgccttg atcgtagtga ctcgcctgct caggtgcgtg
2400tgctgtgtcg tgcctttttt agtcatggcc ggcgccgcag gcgccggcgc ctacgagcac
2460gcgaccacga tgccgagcca agcgggaatc tcgtataaca ctatagtcaa cagagcaggc
2520tacgcaccac tccctatcag cataacacca acaaagatca agctgatacc tacagtgaac
2580ttggagtacg tcacctgcca ctacaaaaca ggaatggatt caccagccat caaatgctgc
2640ggatctcagg aatgcactcc aacttacagg cctgatgaac agtgcaaagt cttcacaggg
2700gtttacccgt tcatgtgggg tggtgcatat tgcttttgcg acactgagaa cacccaagtc
2760agcaaggcct acgtaatgaa atctgacgac tgccttgcgg atcatgctga agcatataaa
2820gcgcacacag cctcagtgca ggcgttcctc aacatcacag tgggagaaca ctctattgtg
2880actaccgtgt atgtgaatgg agaaactcct gtgaatttca atggggtcaa aataactgca
2940ggtccgcttt ccacagcttg gacacccttt gatcgcaaaa tcgtgcagta tgccggggag
3000atctataatt atgattttcc tgagtatggg gcaggacaac caggagcatt tggagatata
3060caatccagaa cagtctcaag ctctgatctg tatgccaata ccaacctagt gctgcagaga
3120cccaaagcag gagcgatcca cgtgccatac actcaggcac cttcgggttt tgagcaatgg
3180aagaaagata aagctccatc attgaaattt accgcccctt tcggatgcga aatatataca
3240aaccccattc gcgccgaaaa ctgtgctgta gggtcaattc cattagcctt tgacattccc
3300gacgccttgt tcaccagggt gtcagaaaca ccgacacttt cagcggccga atgcactctt
3360aacgagtgcg tgtattcttc cgactttggt gggatcgcca cggtcaagta ctcggccagc
3420aagtcaggca agtgcgcagt ccatgtgcca tcagggactg ctaccctaaa agaagcagca
3480gtcgagctaa ccgagcaagg gtcggcgact atccatttct cgaccgcaaa tatccacccg
3540gagttcaggc tccaaatatg cacatcatat gttacgtgca aaggtgattg tcaccccccg
3600aaagaccata ttgtgacaca ccctcagtat cacgcccaaa catttacagc cgcggtgtca
3660aaaaccgcgt ggacgtggtt aacatccctg ctgggaggat cagccgtaat tattataatt
3720ggcttggtgc tggctactat tgtggccatg tacgtgctga ccaaccagaa acataat
3777201259PRTArtificial SequenceSynthetic vector VLP_VEEV VLP 519 -VEEV
VLP 20Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg 1
5 10 15 Asn Pro Phe
Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30 Phe Leu Ala Met Gln Val Gln Glu
Leu Thr Arg Ser Met Ala Asn Leu 35 40
45 Thr Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro
Ser Ala Asn 50 55 60
Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly 65
70 75 80 Lys Lys Lys Lys
Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro 85
90 95 Asn Pro Lys Ala Gln Asn Gly Asn Lys
Lys Lys Thr Asn Lys Lys Pro 100 105
110 Gly Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys
Thr Phe 115 120 125
Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130
135 140 Gly Lys Leu Phe Arg
Pro Met His Val Glu Gly Lys Ile Asp Asn Asp 145 150
155 160 Val Leu Ala Ala Leu Lys Thr Lys Lys Ala
Ser Lys Tyr Asp Leu Glu 165 170
175 Tyr Ala Asp Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr
Thr 180 185 190 His
Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala Val Gln 195
200 205 Tyr Glu Asn Gly Arg Phe
Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210 215
220 Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly
Arg Val Val Ala Ile 225 230 235
240 Val Leu Gly Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val
245 250 255 Met Trp
Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys 260
265 270 Glu Gln Trp Ser Leu Val Thr
Thr Met Cys Leu Leu Ala Asn Val Thr 275 280
285 Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg
Lys Pro Ala Glu 290 295 300
Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn Pro Gly Tyr Asp Glu 305
310 315 320 Leu Leu Glu
Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr 325
330 335 Glu Glu Leu Phe Asn Glu Tyr Lys
Leu Thr Arg Pro Tyr Met Ala Arg 340 345
350 Cys Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile
Ala Ile Glu 355 360 365
Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg Leu Gln Thr Ser 370
375 380 Ser Gln Tyr Gly
Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met 385 390
395 400 Arg Tyr Asp Met His Gly Thr Ile Lys
Glu Ile Pro Leu His Gln Val 405 410
415 Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp Gly His
Gly Tyr 420 425 430
Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe
435 440 445 Lys Lys Asp Ser
Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460 Phe Asn Pro Val Gly Arg Glu Leu
Tyr Thr His Pro Pro Glu His Gly 465 470
475 480 Val Glu Gln Ala Cys Gln Val Tyr Ala His Asp Ala
Gln Asn Arg Gly 485 490
495 Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val Asp Ser Ser Leu
500 505 510 Val Ser Leu
Ser Gly Ser Ser Gly Gly Ser Ser Val Thr Val Thr Pro 515
520 525 Pro Asp Gly Thr Ser Ala Leu Val
Glu Cys Glu Cys Gly Gly Thr Lys 530 535
540 Ile Ser Glu Thr Ile Asn Lys Thr Lys Gln Phe Ser Gln
Cys Thr Lys 545 550 555
560 Lys Glu Gln Cys Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr
565 570 575 Asn Ser Asp Lys
Leu Pro Lys Ala Ala Gly Ala Thr Leu Lys Gly Lys 580
585 590 Leu His Val Pro Phe Leu Leu Ala Asp
Gly Lys Cys Thr Val Pro Leu 595 600
605 Ala Pro Glu Pro Met Ile Thr Phe Gly Phe Arg Ser Val Ser
Leu Lys 610 615 620
Leu His Pro Lys Asn Pro Thr Tyr Leu Ile Thr Arg Gln Leu Ala Asp 625
630 635 640 Glu Pro His Tyr Thr
His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn 645
650 655 Phe Thr Val Thr Glu Lys Gly Trp Glu Phe
Val Trp Gly Asn His Pro 660 665
670 Pro Lys Arg Phe Trp Ala Gln Glu Thr Ala Pro Gly Asn Pro His
Gly 675 680 685 Leu
Pro His Glu Val Ile Thr His Tyr Tyr His Arg Tyr Pro Met Ser 690
695 700 Thr Ile Leu Gly Leu Ser
Ile Cys Ala Ala Ile Ala Thr Val Ser Val 705 710
715 720 Ala Ala Ser Thr Trp Leu Phe Cys Arg Ser Arg
Val Ala Cys Leu Thr 725 730
735 Pro Tyr Arg Leu Thr Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val
740 745 750 Leu Cys
Cys Ala Arg Thr Ala Arg Ala Glu Thr Thr Trp Glu Ser Leu 755
760 765 Asp His Leu Trp Asn Asn Asn
Gln Gln Met Phe Trp Ile Gln Leu Leu 770 775
780 Ile Pro Leu Ala Ala Leu Ile Val Val Thr Arg Leu
Leu Arg Cys Val 785 790 795
800 Cys Cys Val Val Pro Phe Leu Val Met Ala Gly Ala Ala Gly Ala Gly
805 810 815 Ala Tyr Glu
His Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr 820
825 830 Asn Thr Ile Val Asn Arg Ala Gly
Tyr Ala Pro Leu Pro Ile Ser Ile 835 840
845 Thr Pro Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu
Glu Tyr Val 850 855 860
Thr Cys His Tyr Lys Thr Gly Met Asp Ser Pro Ala Ile Lys Cys Cys 865
870 875 880 Gly Ser Gln Glu
Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys Lys 885
890 895 Val Phe Thr Gly Val Tyr Pro Phe Met
Trp Gly Gly Ala Tyr Cys Phe 900 905
910 Cys Asp Thr Glu Asn Thr Gln Val Ser Lys Ala Tyr Val Met
Lys Ser 915 920 925
Asp Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala 930
935 940 Ser Val Gln Ala Phe
Leu Asn Ile Thr Val Gly Glu His Ser Ile Val 945 950
955 960 Thr Thr Val Tyr Val Asn Gly Glu Thr Pro
Val Asn Phe Asn Gly Val 965 970
975 Lys Ile Thr Ala Gly Pro Leu Ser Thr Ala Trp Thr Pro Phe Asp
Arg 980 985 990 Lys
Ile Val Gln Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu 995
1000 1005 Tyr Gly Ala Gly
Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg 1010
1015 1020 Thr Val Ser Ser Ser Asp Leu Tyr
Ala Asn Thr Asn Leu Val Leu 1025 1030
1035 Gln Arg Pro Lys Ala Gly Ala Ile His Val Pro Tyr Thr
Gln Ala 1040 1045 1050
Pro Ser Gly Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu 1055
1060 1065 Lys Phe Thr Ala Pro
Phe Gly Cys Glu Ile Tyr Thr Asn Pro Ile 1070 1075
1080 Arg Ala Glu Asn Cys Ala Val Gly Ser Ile
Pro Leu Ala Phe Asp 1085 1090 1095
Ile Pro Asp Ala Leu Phe Thr Arg Val Ser Glu Thr Pro Thr Leu
1100 1105 1110 Ser Ala
Ala Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp 1115
1120 1125 Phe Gly Gly Ile Ala Thr Val
Lys Tyr Ser Ala Ser Lys Ser Gly 1130 1135
1140 Lys Cys Ala Val His Val Pro Ser Gly Thr Ala Thr
Leu Lys Glu 1145 1150 1155
Ala Ala Val Glu Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe 1160
1165 1170 Ser Thr Ala Asn Ile
His Pro Glu Phe Arg Leu Gln Ile Cys Thr 1175 1180
1185 Ser Tyr Val Thr Cys Lys Gly Asp Cys His
Pro Pro Lys Asp His 1190 1195 1200
Ile Val Thr His Pro Gln Tyr His Ala Gln Thr Phe Thr Ala Ala
1205 1210 1215 Val Ser
Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly 1220
1225 1230 Ser Ala Val Ile Ile Ile Ile
Gly Leu Val Leu Ala Thr Ile Val 1235 1240
1245 Ala Met Tyr Val Leu Thr Asn Gln Lys His Asn
1250 1255 213777DNAArtificial
SequenceSynthetic vector VLP_VEEV VLP 538 -VEEV VLP 21atgttcccgt
tccagccaat gtatccgatg cagccaatgc cctatcgcaa cccgttcgcg 60gccccgcgca
ggccctggtt ccccagaacc gacccttttc tggcgatgca ggtgcaggaa 120ttaacccgct
cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc acctgagggg 180ccatccgcta
ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg aggccaaggg 240aagaagaaga
agaaccaagg gaagaagaag gctaagacag ggccgcctaa tccgaaggca 300cagaatggaa
acaagaagaa gaccaacaag aaaccaggca agagacagcg catggtcatg 360aaattggaat
ctgacaagac gttcccaatc atgttggaag ggaagataaa cggctacgct 420tgtgtggtcg
gagggaagtt attcaggccg atgcatgtgg aaggcaagat cgacaacgac 480gttctggccg
cgcttaagac gaagaaagca tccaaatacg atcttgagta tgcagatgtg 540ccacagaaca
tgcgggccga tacattcaaa tacacccatg agaaacccca aggctattac 600agctggcatc
atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc gaaaggagtt 660ggggccaagg
gagacagcgg acgacccatt ctggataacc agggacgggt ggtcgctatt 720gtgctgggag
gtgtgaatga aggatctagg acagcccttt cagtcgtcat gtggaacgag 780aagggagtta
ccgtgaagta tactccagag aactgcgagc aatggtcact agtgaccacc 840atgtgtctgc
tcgccaatgt gacgttccca tgtgctcaac caccaatttg ctacgacaga 900aaaccagcag
agactttggc catgctcagc gttaacgttg acaacccggg ctacgatgag 960ctgctggaag
cagctgttaa gtgccccgga aggaaaagga gatccaccga ggagctgttt 1020aatgagtata
agctaacgcg cccttacatg gccagatgca tcagatgtgc agttgggagc 1080tgccatagtc
caatagcaat cgaggcagta aagagcgacg ggcacgacgg ttatgttaga 1140cttcagactt
cctcgcagta tggcctggat tcctccggca acttaaaggg caggaccatg 1200cggtatgaca
tgcacgggac cattaaagag ataccactac atcaagtgtc actctataca 1260tctcgcccgt
gtcacattgt ggatgggcac ggttatttcc tgcttgccag gtgcccggca 1320ggggactcca
tcaccatgga atttaagaaa gattccgtca gacactcctg ctcggtgccg 1380tatgaagtga
aatttaatcc tgtaggcaga gaactctata ctcatccccc agaacacgga 1440gtagagcaag
cgtgccaagt ctacgcacat gatgcacaga acagaggagc ttatgtcgag 1500atgcacctcc
cgggctcaga agtggacagc agtttggttt ccttgagcgg cagttcagtc 1560accgtgacac
ctcctgatgg gactagcgcc ctggtggaat gcgagtgtgg ctccggagga 1620tccggcacaa
agatctccga gaccatcaac aagacaaaac agttcagcca gtgcacaaag 1680aaggagcagt
gcagagcata tcggctgcag aacgataagt gggtgtataa ttctgacaaa 1740ctgcccaaag
cagcgggagc caccttaaaa ggaaaactgc atgtcccatt cttgctggca 1800gacggcaaat
gcaccgtgcc tctagcacca gaacctatga taaccttcgg tttcagatca 1860gtgtcactga
aactgcaccc taagaatccc acatatctaa tcacccgcca acttgctgat 1920gagcctcact
acacgcacga gctcatatct gaaccagctg ttaggaattt taccgtcacc 1980gaaaaagggt
gggagtttgt atggggaaac cacccgccga aaaggttttg ggcacaggaa 2040acagcacccg
gaaatccaca tgggctaccg cacgaggtga taactcatta ttaccacaga 2100taccctatgt
ccaccatcct gggtttgtca atttgtgccg ccattgcaac cgtttccgtt 2160gcagcgtcta
cctggctgtt ttgcagatca agagttgcgt gcctaactcc ttaccggcta 2220acacctaacg
ctaggatacc attttgtctg gctgtgcttt gctgcgcccg cactgcccgg 2280gccgagacca
cctgggagtc cttggatcac ctatggaaca ataaccaaca gatgttctgg 2340attcaattgc
tgatccctct ggccgccttg atcgtagtga ctcgcctgct caggtgcgtg 2400tgctgtgtcg
tgcctttttt agtcatggcc ggcgccgcag gcgccggcgc ctacgagcac 2460gcgaccacga
tgccgagcca agcgggaatc tcgtataaca ctatagtcaa cagagcaggc 2520tacgcaccac
tccctatcag cataacacca acaaagatca agctgatacc tacagtgaac 2580ttggagtacg
tcacctgcca ctacaaaaca ggaatggatt caccagccat caaatgctgc 2640ggatctcagg
aatgcactcc aacttacagg cctgatgaac agtgcaaagt cttcacaggg 2700gtttacccgt
tcatgtgggg tggtgcatat tgcttttgcg acactgagaa cacccaagtc 2760agcaaggcct
acgtaatgaa atctgacgac tgccttgcgg atcatgctga agcatataaa 2820gcgcacacag
cctcagtgca ggcgttcctc aacatcacag tgggagaaca ctctattgtg 2880actaccgtgt
atgtgaatgg agaaactcct gtgaatttca atggggtcaa aataactgca 2940ggtccgcttt
ccacagcttg gacacccttt gatcgcaaaa tcgtgcagta tgccggggag 3000atctataatt
atgattttcc tgagtatggg gcaggacaac caggagcatt tggagatata 3060caatccagaa
cagtctcaag ctctgatctg tatgccaata ccaacctagt gctgcagaga 3120cccaaagcag
gagcgatcca cgtgccatac actcaggcac cttcgggttt tgagcaatgg 3180aagaaagata
aagctccatc attgaaattt accgcccctt tcggatgcga aatatataca 3240aaccccattc
gcgccgaaaa ctgtgctgta gggtcaattc cattagcctt tgacattccc 3300gacgccttgt
tcaccagggt gtcagaaaca ccgacacttt cagcggccga atgcactctt 3360aacgagtgcg
tgtattcttc cgactttggt gggatcgcca cggtcaagta ctcggccagc 3420aagtcaggca
agtgcgcagt ccatgtgcca tcagggactg ctaccctaaa agaagcagca 3480gtcgagctaa
ccgagcaagg gtcggcgact atccatttct cgaccgcaaa tatccacccg 3540gagttcaggc
tccaaatatg cacatcatat gttacgtgca aaggtgattg tcaccccccg 3600aaagaccata
ttgtgacaca ccctcagtat cacgcccaaa catttacagc cgcggtgtca 3660aaaaccgcgt
ggacgtggtt aacatccctg ctgggaggat cagccgtaat tattataatt 3720ggcttggtgc
tggctactat tgtggccatg tacgtgctga ccaaccagaa acataat
3777221259PRTArtificial SequenceSynthetic vector VLP_VEEV VLP 538 -VEEV
VLP 22Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg 1
5 10 15 Asn Pro Phe
Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro 20
25 30 Phe Leu Ala Met Gln Val Gln Glu
Leu Thr Arg Ser Met Ala Asn Leu 35 40
45 Thr Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro
Ser Ala Asn 50 55 60
Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly 65
70 75 80 Lys Lys Lys Lys
Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro 85
90 95 Asn Pro Lys Ala Gln Asn Gly Asn Lys
Lys Lys Thr Asn Lys Lys Pro 100 105
110 Gly Lys Arg Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys
Thr Phe 115 120 125
Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys Val Val Gly 130
135 140 Gly Lys Leu Phe Arg
Pro Met His Val Glu Gly Lys Ile Asp Asn Asp 145 150
155 160 Val Leu Ala Ala Leu Lys Thr Lys Lys Ala
Ser Lys Tyr Asp Leu Glu 165 170
175 Tyr Ala Asp Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr
Thr 180 185 190 His
Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala Val Gln 195
200 205 Tyr Glu Asn Gly Arg Phe
Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210 215
220 Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly
Arg Val Val Ala Ile 225 230 235
240 Val Leu Gly Gly Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val
245 250 255 Met Trp
Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn Cys 260
265 270 Glu Gln Trp Ser Leu Val Thr
Thr Met Cys Leu Leu Ala Asn Val Thr 275 280
285 Phe Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg
Lys Pro Ala Glu 290 295 300
Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn Pro Gly Tyr Asp Glu 305
310 315 320 Leu Leu Glu
Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr 325
330 335 Glu Glu Leu Phe Asn Glu Tyr Lys
Leu Thr Arg Pro Tyr Met Ala Arg 340 345
350 Cys Ile Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile
Ala Ile Glu 355 360 365
Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg Leu Gln Thr Ser 370
375 380 Ser Gln Tyr Gly
Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met 385 390
395 400 Arg Tyr Asp Met His Gly Thr Ile Lys
Glu Ile Pro Leu His Gln Val 405 410
415 Ser Leu Tyr Thr Ser Arg Pro Cys His Ile Val Asp Gly His
Gly Tyr 420 425 430
Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr Met Glu Phe
435 440 445 Lys Lys Asp Ser
Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460 Phe Asn Pro Val Gly Arg Glu Leu
Tyr Thr His Pro Pro Glu His Gly 465 470
475 480 Val Glu Gln Ala Cys Gln Val Tyr Ala His Asp Ala
Gln Asn Arg Gly 485 490
495 Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val Asp Ser Ser Leu
500 505 510 Val Ser Leu
Ser Gly Ser Ser Val Thr Val Thr Pro Pro Asp Gly Thr 515
520 525 Ser Ala Leu Val Glu Cys Glu Cys
Gly Ser Gly Gly Ser Gly Thr Lys 530 535
540 Ile Ser Glu Thr Ile Asn Lys Thr Lys Gln Phe Ser Gln
Cys Thr Lys 545 550 555
560 Lys Glu Gln Cys Arg Ala Tyr Arg Leu Gln Asn Asp Lys Trp Val Tyr
565 570 575 Asn Ser Asp Lys
Leu Pro Lys Ala Ala Gly Ala Thr Leu Lys Gly Lys 580
585 590 Leu His Val Pro Phe Leu Leu Ala Asp
Gly Lys Cys Thr Val Pro Leu 595 600
605 Ala Pro Glu Pro Met Ile Thr Phe Gly Phe Arg Ser Val Ser
Leu Lys 610 615 620
Leu His Pro Lys Asn Pro Thr Tyr Leu Ile Thr Arg Gln Leu Ala Asp 625
630 635 640 Glu Pro His Tyr Thr
His Glu Leu Ile Ser Glu Pro Ala Val Arg Asn 645
650 655 Phe Thr Val Thr Glu Lys Gly Trp Glu Phe
Val Trp Gly Asn His Pro 660 665
670 Pro Lys Arg Phe Trp Ala Gln Glu Thr Ala Pro Gly Asn Pro His
Gly 675 680 685 Leu
Pro His Glu Val Ile Thr His Tyr Tyr His Arg Tyr Pro Met Ser 690
695 700 Thr Ile Leu Gly Leu Ser
Ile Cys Ala Ala Ile Ala Thr Val Ser Val 705 710
715 720 Ala Ala Ser Thr Trp Leu Phe Cys Arg Ser Arg
Val Ala Cys Leu Thr 725 730
735 Pro Tyr Arg Leu Thr Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val
740 745 750 Leu Cys
Cys Ala Arg Thr Ala Arg Ala Glu Thr Thr Trp Glu Ser Leu 755
760 765 Asp His Leu Trp Asn Asn Asn
Gln Gln Met Phe Trp Ile Gln Leu Leu 770 775
780 Ile Pro Leu Ala Ala Leu Ile Val Val Thr Arg Leu
Leu Arg Cys Val 785 790 795
800 Cys Cys Val Val Pro Phe Leu Val Met Ala Gly Ala Ala Gly Ala Gly
805 810 815 Ala Tyr Glu
His Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr 820
825 830 Asn Thr Ile Val Asn Arg Ala Gly
Tyr Ala Pro Leu Pro Ile Ser Ile 835 840
845 Thr Pro Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu
Glu Tyr Val 850 855 860
Thr Cys His Tyr Lys Thr Gly Met Asp Ser Pro Ala Ile Lys Cys Cys 865
870 875 880 Gly Ser Gln Glu
Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys Lys 885
890 895 Val Phe Thr Gly Val Tyr Pro Phe Met
Trp Gly Gly Ala Tyr Cys Phe 900 905
910 Cys Asp Thr Glu Asn Thr Gln Val Ser Lys Ala Tyr Val Met
Lys Ser 915 920 925
Asp Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala 930
935 940 Ser Val Gln Ala Phe
Leu Asn Ile Thr Val Gly Glu His Ser Ile Val 945 950
955 960 Thr Thr Val Tyr Val Asn Gly Glu Thr Pro
Val Asn Phe Asn Gly Val 965 970
975 Lys Ile Thr Ala Gly Pro Leu Ser Thr Ala Trp Thr Pro Phe Asp
Arg 980 985 990 Lys
Ile Val Gln Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu 995
1000 1005 Tyr Gly Ala Gly
Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg 1010
1015 1020 Thr Val Ser Ser Ser Asp Leu Tyr
Ala Asn Thr Asn Leu Val Leu 1025 1030
1035 Gln Arg Pro Lys Ala Gly Ala Ile His Val Pro Tyr Thr
Gln Ala 1040 1045 1050
Pro Ser Gly Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu 1055
1060 1065 Lys Phe Thr Ala Pro
Phe Gly Cys Glu Ile Tyr Thr Asn Pro Ile 1070 1075
1080 Arg Ala Glu Asn Cys Ala Val Gly Ser Ile
Pro Leu Ala Phe Asp 1085 1090 1095
Ile Pro Asp Ala Leu Phe Thr Arg Val Ser Glu Thr Pro Thr Leu
1100 1105 1110 Ser Ala
Ala Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp 1115
1120 1125 Phe Gly Gly Ile Ala Thr Val
Lys Tyr Ser Ala Ser Lys Ser Gly 1130 1135
1140 Lys Cys Ala Val His Val Pro Ser Gly Thr Ala Thr
Leu Lys Glu 1145 1150 1155
Ala Ala Val Glu Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe 1160
1165 1170 Ser Thr Ala Asn Ile
His Pro Glu Phe Arg Leu Gln Ile Cys Thr 1175 1180
1185 Ser Tyr Val Thr Cys Lys Gly Asp Cys His
Pro Pro Lys Asp His 1190 1195 1200
Ile Val Thr His Pro Gln Tyr His Ala Gln Thr Phe Thr Ala Ala
1205 1210 1215 Val Ser
Lys Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly 1220
1225 1230 Ser Ala Val Ile Ile Ile Ile
Gly Leu Val Leu Ala Thr Ile Val 1235 1240
1245 Ala Met Tyr Val Leu Thr Asn Gln Lys His Asn
1250 1255 238416DNAArtificial
SequenceSynthetic vector VLP_CHI 520 23gaattcccat tgcatacgtt gtatccatat
cataatatgt acatttatat tggctcatgt 60ccaacattac cgccatgttg acattgatta
ttgactagtt attaatagta atcaattacg 120gggtcattag ttcatagccc atatatggag
ttccgcgtta cataacttac ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc
ccattgacgt caataatgac gtatgttccc 240atagtaacgc caatagggac tttccattga
cgtcaatggg tggagtattt acggtaaact 300gcccacttgg cagtacatca agtgtatcat
atgccaagta cgccccctat tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc
cagtacatga ccttatggga ctttcctact 420tggcagtaca tctacgtatt agtcatcgct
attaccatgg tgatgcggtt ttggcagtac 480atcaatgggc gtggatagcg gtttgactca
cggggatttc caagtctcca ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat
caacgggact ttccaaaatg tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg
cgtgtacggt gggaggtcta tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg
agacgccatc cacgctgttt tgacctccat 720agaagacacc gggaccgatc cagcctccgt
taacggtgga gggcagtgta gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac
ataatagctg acagactaac agactgttcc 840tttccatggg tcttttctgc agtcaccgtc
gtcgacacgt gtgatcagat atcgcggccg 900ccaccatgga gttcatcccg acgcaaactt
tctataacag aaggtaccaa ccccgaccct 960gggccccacg ccctacaatt caagtaatta
gacctagacc acgtccacag aggcaggctg 1020ggcaactcgc ccagctgatc tccgcagtca
acaaattgac catgcgcgcg gtacctcaac 1080agaagcctcg cagaaatcgg aaaaacaaga
agcaaaggca gaagaagcag gcgccgcaaa 1140acgacccaaa gcaaaagaag caaccaccac
aaaagaagcc ggctcaaaag aagaagaaac 1200caggccgtag ggagagaatg tgcatgaaaa
ttgaaaatga ttgcatcttc gaagtcaagc 1260atgaaggcaa agtgatgggc tacgcatgcc
tggtggggga taaagtaatg aaaccagcac 1320atgtgaaggg aactatcgac aatgccgatc
tggctaaact ggcctttaag cggtcgtcta 1380aatacgatct tgaatgtgca cagataccgg
tgcacatgaa gtctgatgcc tcgaagttta 1440cccacgagaa acccgagggg tactataact
ggcatcacgg agcagtgcag tattcaggag 1500gccggttcac tatcccgacg ggtgcaggca
agccgggaga cagcggcaga ccgatcttcg 1560acaacaaagg acgggtggtg gccatcgtcc
taggaggggc caacgaaggt gcccgcacgg 1620ccctctccgt ggtgacgtgg aacaaagaca
tcgtcacaaa aattacccct gagggagccg 1680aagagtggag cctcgccctc ccggtcttgt
gcctgttggc aaacactaca ttcccctgct 1740ctcagccgcc ttgcacaccc tgctgctacg
aaaaggaacc ggaaagcacc ttgcgcatgc 1800ttgaggacaa cgtgatgaga cccggatact
accagctact aaaagcatcg ctgacttgct 1860ctccccaccg ccaaagacgc agtactaagg
acaattttaa tgtctataaa gccacaagac 1920catatctagc tcattgtcct gactgcggag
aagggcattc gtgccacagc cctatcgcat 1980tggagcgcat cagaaatgaa gcaacggacg
gaacgctgaa aatccaggtc tctttgcaga 2040tcgggataaa gacagatgac agccacgatt
ggaccaagct gcgctatatg gatagccata 2100cgccagcgga cgcggagcga gccggattgc
ttgtaaggac ttcagcaccg tgcacgatca 2160ccgggaccat gggacacttt attctcgccc
gatgcccgaa aggagagacg ctgacagtgg 2220gatttacgga cagcagaaag atcagccaca
catgcacaca cccgttccat catgaaccac 2280ctgtgatagg tagggagagg ttccactctc
gaccacaaca tggtaaagag ttaccttgca 2340gcacgtacgt gcagagcacc gctgccactg
ctgaggagat agaggtgcat atgcccccag 2400atactcctga ccgcacgctg atgacgcagc
agtctggcaa cgtgaagatc acagttaatg 2460gctccggagg atccggcggg cagacggtgc
ggtacaagtg caactgcggt ggctcaaacg 2520agggactgac aaccacagac aaagtgatca
ataactgcaa aattgatcag tgccatgctg 2580cagtcactaa tcacaagaat tggcaataca
actccccttt agtcccgcgc aacgctgaac 2640tcggggaccg taaaggaaag atccacatcc
cattcccatt ggcaaacgtg acttgcagag 2700tgccaaaagc aagaaaccct acagtaactt
acggaaaaaa ccaagtcacc atgctgctgt 2760atcctgacca tccgacactc ttgtcttacc
gtaacatggg acaggaacca aattaccacg 2820aggagtgggt gacacacaag aaggaggtta
ccttgaccgt gcctactgag ggtctggagg 2880tcacttgggg caacaacgaa ccatacaagt
actggccgca gatgtctacg aacggtactg 2940ctcatggtca cccacatgag ataatcttgt
actattatga gctgtacccc actatgactg 3000tagtcattgt gtcggtggcc tcgttcgtgc
ttctgtcgat ggtgggcaca gcagtgggaa 3060tgtgtgtgtg cgcacggcgc agatgcatta
caccatatga attaacacca ggagccactg 3120ttcccttcct gctcagcctg ctatgctgcg
tcagaacgac caaggcggcc acatattacg 3180aggctgcggc atatctatgg aacgaacagc
agcccctgtt ctggttgcag gctcttatcc 3240cgctggccgc cttgatcgtc ctgtgcaact
gtctgaaact cttgccatgc tgctgtaaga 3300ccctggcttt tttagccgta atgagcatcg
gtgcccacac tgtgagcgcg tacgaacacg 3360taacagtgat cccgaacacg gtgggagtac
cgtataagac tcttgtcaac agaccgggtt 3420acagccccat ggtgttggag atggagctac
aatcagtcac cttggaacca acactgtcac 3480ttgactacat cacgtgcgag tacaaaactg
tcatcccctc cccgtacgtg aagtgctgtg 3540gtacagcaga gtgcaaggac aagagcctac
cagactacag ctgcaaggtc tttactggag 3600tctacccatt tatgtggggc ggcgcctact
gcttttgcga cgccgaaaat acgcaattga 3660gcgaggcaca tgtagagaaa tctgaatctt
gcaaaacaga gtttgcatcg gcctacagag 3720cccacaccgc atcggcgtcg gcgaagctcc
gcgtccttta ccaaggaaac aacattaccg 3780tagctgccta cgctaacggt gaccatgccg
tcacagtaaa ggacgccaag tttgtcgtgg 3840gcccaatgtc ctccgcctgg acaccttttg
acaacaaaat cgtggtgtac aaaggcgacg 3900tctacaacat ggactaccca ccttttggcg
caggaagacc aggacaattt ggtgacattc 3960aaagtcgtac accggaaagt aaagacgttt
atgccaacac tcagttggta ctacagaggc 4020cagcagcagg cacggtacat gtaccatact
ctcaggcacc atctggcttc aagtattggc 4080tgaaggaacg aggagcatcg ctacagcaca
cggcaccgtt cggttgccag attgcgacaa 4140acccggtaag agctgtaaat tgcgctgtgg
ggaacatacc aatttccatc gacataccgg 4200atgcggcctt tactagggtt gtcgatgcac
cctctgtaac ggacatgtca tgcgaagtac 4260cagcctgcac tcactcctcc gactttgggg
gcgtcgccat catcaaatac acagctagca 4320agaaaggtaa atgtgcagta cattcgatga
ccaacgccgt taccattcga gaagccgacg 4380tagaagtaga ggggaactcc cagctgcaaa
tatccttctc aacagccctg gcaagcgccg 4440agtttcgcgt gcaagtgtgc tccacacaag
tacactgcgc agccgcatgc caccctccaa 4500aggaccacat agtcaattac ccagcatcac
acaccaccct tggggtccag gatatatcca 4560caacggcaat gtcttgggtg cagaagatta
cgggaggagt aggattaatt gttgctgttg 4620ctgccttaat tttaattgtg gtgctatgcg
tgtcgtttag caggcactaa ggatctagat 4680ctgctgtgcc ttctagttgc cagccatctg
ttgtttgccc ctcccccgtg ccttccttga 4740ccctggaagg tgccactccc actgtccttt
cctaataaaa tgaggaaatt gcatcgcatt 4800gtctgagtag gtgtcattct attctggggg
gtggggtggg gcaggacagc aagggggagg 4860attgggaaga caatagcagg catgctgggg
atgcggtggg ctctatgggt acccaggtgc 4920tgaagaattg acccggttcc tcctgggcca
gaaagaagca ggcacatccc cttctctgtg 4980acacaccctg tccacgcccc tggttcttag
ttccagcccc actcatagga cactcatagc 5040tcaggagggc tccgccttca atcccacccg
ctaaagtact tggagcggtc tctccctccc 5100tcatcagccc accaaaccaa acctagcctc
caagagtggg aagaaattaa agcaagatag 5160gctattaagt gcagagggag agaaaatgcc
tccaacatgt gaggaagtaa tgagagaaat 5220catagaattt taaggccatg atttaaggcc
atcatggcct aagcttgaaa ggagatagga 5280tcaaagcttg gcgtaatcat ggtcatagct
gtttcctgtg tgaaattgtt atccgctcac 5340aattccacac aacatacgag ccggaagcat
aaagtgtaaa gcctggggtg cctaatgagt 5400gagctaactc acattaattg cgttgcgctc
actgcccgct ttccagtcgg gaaacctgtc 5460gtgccagctg cattaatgaa tcggccaacg
cgcggggaga ggcggtttgc gtattgggcg 5520ctcttccgct tcctcgctca ctgactcgct
gcgctcggtc gttcggctgc ggcgagcggt 5580atcagctcac tcaaaggcgg taatacggtt
atccacagaa tcaggggata acgcaggaaa 5640gaacatgtga gcaaaaggcc agcaaaaggc
caggaaccgt aaaaaggccg cgttgctggc 5700gtttttccat aggctccgcc cccctgacga
gcatcacaaa aatcgacgct caagtcagag 5760gtggcgaaac ccgacaggac tataaagata
ccaggcgttt ccccctggaa gctccctcgt 5820gcgctctcct gttccgaccc tgccgcttac
cggatacctg tccgcctttc tcccttcggg 5880aagcgtggcg ctttctcata gctcacgctg
taggtatctc agttcggtgt aggtcgttcg 5940ctccaagctg ggctgtgtgc acgaaccccc
cgttcagccc gaccgctgcg ccttatccgg 6000taactatcgt cttgagtcca acccggtaag
acacgactta tcgccactgg cagcagccac 6060tggtaacagg attagcagag cgaggtatgt
aggcggtgct acagagttct tgaagtggtg 6120gcctaactac ggctacacta gaagaacagt
atttggtatc tgcgctctgc tgaagccagt 6180taccttcgga aaaagagttg gtagctcttg
atccggcaaa caaaccaccg ctggtagcgg 6240tggttttttt gtttgcaagc agcagattac
gcgcagaaaa aaaggatctc aagaagatcc 6300tttgatcttt tctacggggt ctgacgctca
gtggaacgaa aactcacgtt aagggatttt 6360ggtcatgaga ttatcaaaaa ggatcttcac
ctagatcctt ttaaattaaa aatgaagttt 6420taaatcaatc taaagtatat atgagtaaac
ttggtctgac agttaccaat gcttaatcag 6480tgaggcacct atctcagcga tctgtctatt
tcgttcatcc atagttgcct gactccccgt 6540cgtgtagata actacgatac gggagggctt
accatctggc cccagtgctg caatgatacc 6600gcgagaacca cgctcaccgg ctccagattt
atcagcaata aaccagccag ccggaagggc 6660cgagcgcaga agtggtcctg caactttatc
cgcctccatc cagtctatta attgttgccg 6720ggaagctaga gtaagtagtt cgccagttaa
tagtttgcgc aacgttgttg ccattgctac 6780aggcatcgtg gtgtcacgct cgtcgtttgg
tatggcttca ttcagctccg gttcccaacg 6840atcaaggcga gttacatgat cccccatgtt
gtgcaaaaaa gcggttagct ccttcggtcc 6900tccgatcgtt gtcagaagta agttggccgc
agtgttatca ctcatggtta tggcagcact 6960gcataattct cttactgtca tgccatccgt
aagatgcttt tctgtgactg gtgagtactc 7020aaccaagtca ttctgagaat agtgtatgcg
gcgaccgagt tgctcttgcc cggcgtcaat 7080acgggataat accgcgccac atagcagaac
tttaaaagtg ctcatcattg gaaaacgttc 7140ttcggggcga aaactctcaa ggatcttacc
gctgttgaga tccagttcga tgtaacccac 7200tcgtgcaccc aactgatctt cagcatcttt
tactttcacc agcgtttctg ggtgagcaaa 7260aacaggaagg caaaatgccg caaaaaaggg
aataagggcg acacggaaat gttgaatact 7320catactcttc ctttttcaat attattgaag
catttatcag ggttattgtc tcatgagcgg 7380atacatattt gaatgtattt agaaaaataa
acaaataggg gttccgcgca catttccccg 7440aaaagtgcca cctgacgtct aagaaaccat
tattatcatg acattaacct ataaaaatag 7500gcgtatcacg aggccctttc gggtcgcgcg
tttcggtgat gacggtgaaa acctctgaca 7560catgcagctc ccgttgacgg tcacagcttg
tctgtaagcg gatgccggga gcagacaagc 7620ccgtcagggc gcgtcagcgg gtgttggcgg
gtgtcggggc tggcttaact atgcggcatc 7680agagcagatt gtactgagag tgcaccataa
aattgtaaac gttaatattt tgttaaaatt 7740cgcgttaaat ttttgttaaa tcagctcatt
ttttaaccaa taggccgaaa tcggcaaaat 7800cccttataaa tcaaaagaat agcccgagat
agggttgagt gttgttccag tttggaacaa 7860gagtccacta ttaaagaacg tggactccaa
cgtcaaaggg cgaaaaaccg tctatcaggg 7920cgatggccca ctacgtgaac catcacccaa
atcaagtttt ttggggtcga ggtgccgtaa 7980agcactaaat cggaacccta aagggagccc
ccgatttaga gcttgacggg gaaagccggc 8040gaacgtggcg agaaaggaag ggaagaaagc
gaaaggagcg ggcgctaggg cgctggcaag 8100tgtagcggtc acgctgcgcg taaccaccac
acccgccgcg cttaatgcgc cgctacaggg 8160cgcgtactat ggttgctttg acgtatgcgg
tgtgaaatac cgcacagatg cgtaaggaga 8220aaataccgca tcaggcgcca ttcgccattc
aggctgcgca actgttggga agggcgatcg 8280gtgcgggcct cttcgctatt acgccagctg
gcgaaagggg gatgtgctgc aaggcgatta 8340agttgggtaa cgccagggtt ttcccagtca
cgacgttgta aaacgacggc cagtgaattc 8400catggtctca actttc
8416243762DNAArtificial
SequenceSynthetic vector insert VLP_CHI 520 24atggagttca tcccgacgca
aactttctat aacagaaggt accaaccccg accctgggcc 60ccacgcccta caattcaagt
aattagacct agaccacgtc cacagaggca ggctgggcaa 120ctcgcccagc tgatctccgc
agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag 180cctcgcagaa atcggaaaaa
caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac 240ccaaagcaaa agaagcaacc
accacaaaag aagccggctc aaaagaagaa gaaaccaggc 300cgtagggaga gaatgtgcat
gaaaattgaa aatgattgca tcttcgaagt caagcatgaa 360ggcaaagtga tgggctacgc
atgcctggtg ggggataaag taatgaaacc agcacatgtg 420aagggaacta tcgacaatgc
cgatctggct aaactggcct ttaagcggtc gtctaaatac 480gatcttgaat gtgcacagat
accggtgcac atgaagtctg atgcctcgaa gtttacccac 540gagaaacccg aggggtacta
taactggcat cacggagcag tgcagtattc aggaggccgg 600ttcactatcc cgacgggtgc
aggcaagccg ggagacagcg gcagaccgat cttcgacaac 660aaaggacggg tggtggccat
cgtcctagga ggggccaacg aaggtgcccg cacggccctc 720tccgtggtga cgtggaacaa
agacatcgtc acaaaaatta cccctgaggg agccgaagag 780tggagcctcg ccctcccggt
cttgtgcctg ttggcaaaca ctacattccc ctgctctcag 840ccgccttgca caccctgctg
ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag 900gacaacgtga tgagacccgg
atactaccag ctactaaaag catcgctgac ttgctctccc 960caccgccaaa gacgcagtac
taaggacaat tttaatgtct ataaagccac aagaccatat 1020ctagctcatt gtcctgactg
cggagaaggg cattcgtgcc acagccctat cgcattggag 1080cgcatcagaa atgaagcaac
ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg 1140ataaagacag atgacagcca
cgattggacc aagctgcgct atatggatag ccatacgcca 1200gcggacgcgg agcgagccgg
attgcttgta aggacttcag caccgtgcac gatcaccggg 1260accatgggac actttattct
cgcccgatgc ccgaaaggag agacgctgac agtgggattt 1320acggacagca gaaagatcag
ccacacatgc acacacccgt tccatcatga accacctgtg 1380ataggtaggg agaggttcca
ctctcgacca caacatggta aagagttacc ttgcagcacg 1440tacgtgcaga gcaccgctgc
cactgctgag gagatagagg tgcatatgcc cccagatact 1500cctgaccgca cgctgatgac
gcagcagtct ggcaacgtga agatcacagt taatggctcc 1560ggaggatccg gcgggcagac
ggtgcggtac aagtgcaact gcggtggctc aaacgaggga 1620ctgacaacca cagacaaagt
gatcaataac tgcaaaattg atcagtgcca tgctgcagtc 1680actaatcaca agaattggca
atacaactcc cctttagtcc cgcgcaacgc tgaactcggg 1740gaccgtaaag gaaagatcca
catcccattc ccattggcaa acgtgacttg cagagtgcca 1800aaagcaagaa accctacagt
aacttacgga aaaaaccaag tcaccatgct gctgtatcct 1860gaccatccga cactcttgtc
ttaccgtaac atgggacagg aaccaaatta ccacgaggag 1920tgggtgacac acaagaagga
ggttaccttg accgtgccta ctgagggtct ggaggtcact 1980tggggcaaca acgaaccata
caagtactgg ccgcagatgt ctacgaacgg tactgctcat 2040ggtcacccac atgagataat
cttgtactat tatgagctgt accccactat gactgtagtc 2100attgtgtcgg tggcctcgtt
cgtgcttctg tcgatggtgg gcacagcagt gggaatgtgt 2160gtgtgcgcac ggcgcagatg
cattacacca tatgaattaa caccaggagc cactgttccc 2220ttcctgctca gcctgctatg
ctgcgtcaga acgaccaagg cggccacata ttacgaggct 2280gcggcatatc tatggaacga
acagcagccc ctgttctggt tgcaggctct tatcccgctg 2340gccgccttga tcgtcctgtg
caactgtctg aaactcttgc catgctgctg taagaccctg 2400gcttttttag ccgtaatgag
catcggtgcc cacactgtga gcgcgtacga acacgtaaca 2460gtgatcccga acacggtggg
agtaccgtat aagactcttg tcaacagacc gggttacagc 2520cccatggtgt tggagatgga
gctacaatca gtcaccttgg aaccaacact gtcacttgac 2580tacatcacgt gcgagtacaa
aactgtcatc ccctccccgt acgtgaagtg ctgtggtaca 2640gcagagtgca aggacaagag
cctaccagac tacagctgca aggtctttac tggagtctac 2700ccatttatgt ggggcggcgc
ctactgcttt tgcgacgccg aaaatacgca attgagcgag 2760gcacatgtag agaaatctga
atcttgcaaa acagagtttg catcggccta cagagcccac 2820accgcatcgg cgtcggcgaa
gctccgcgtc ctttaccaag gaaacaacat taccgtagct 2880gcctacgcta acggtgacca
tgccgtcaca gtaaaggacg ccaagtttgt cgtgggccca 2940atgtcctccg cctggacacc
ttttgacaac aaaatcgtgg tgtacaaagg cgacgtctac 3000aacatggact acccaccttt
tggcgcagga agaccaggac aatttggtga cattcaaagt 3060cgtacaccgg aaagtaaaga
cgtttatgcc aacactcagt tggtactaca gaggccagca 3120gcaggcacgg tacatgtacc
atactctcag gcaccatctg gcttcaagta ttggctgaag 3180gaacgaggag catcgctaca
gcacacggca ccgttcggtt gccagattgc gacaaacccg 3240gtaagagctg taaattgcgc
tgtggggaac ataccaattt ccatcgacat accggatgcg 3300gcctttacta gggttgtcga
tgcaccctct gtaacggaca tgtcatgcga agtaccagcc 3360tgcactcact cctccgactt
tgggggcgtc gccatcatca aatacacagc tagcaagaaa 3420ggtaaatgtg cagtacattc
gatgaccaac gccgttacca ttcgagaagc cgacgtagaa 3480gtagagggga actcccagct
gcaaatatcc ttctcaacag ccctggcaag cgccgagttt 3540cgcgtgcaag tgtgctccac
acaagtacac tgcgcagccg catgccaccc tccaaaggac 3600cacatagtca attacccagc
atcacacacc acccttgggg tccaggatat atccacaacg 3660gcaatgtctt gggtgcagaa
gattacggga ggagtaggat taattgttgc tgttgctgcc 3720ttaattttaa ttgtggtgct
atgcgtgtcg tttagcaggc ac 3762251254PRTArtificial
SequenceSynthetic vector VLP_CHI 520 25Met Glu Phe Ile Pro Thr Gln Thr
Phe Tyr Asn Arg Arg Tyr Gln Pro 1 5 10
15 Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val Ile Arg
Pro Arg Pro 20 25 30
Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val
35 40 45 Asn Lys Leu Thr
Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60 Arg Lys Asn Lys Lys Gln Arg Gln
Lys Lys Gln Ala Pro Gln Asn Asp 65 70
75 80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro
Ala Gln Lys Lys 85 90
95 Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp
100 105 110 Cys Ile Phe
Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys 115
120 125 Leu Val Gly Asp Lys Val Met Lys
Pro Ala His Val Lys Gly Thr Ile 130 135
140 Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser
Ser Lys Tyr 145 150 155
160 Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175 Lys Phe Thr His
Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190 Ala Val Gln Tyr Ser Gly Gly Arg Phe
Thr Ile Pro Thr Gly Ala Gly 195 200
205 Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly
Arg Val 210 215 220
Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225
230 235 240 Ser Val Val Thr Trp
Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu 245
250 255 Gly Ala Glu Glu Trp Ser Leu Ala Leu Pro
Val Leu Cys Leu Leu Ala 260 265
270 Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys
Tyr 275 280 285 Glu
Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300 Arg Pro Gly Tyr Tyr Gln
Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305 310
315 320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe
Asn Val Tyr Lys Ala 325 330
335 Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser
340 345 350 Cys His
Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365 Gly Thr Leu Lys Ile Gln Val
Ser Leu Gln Ile Gly Ile Lys Thr Asp 370 375
380 Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp
Ser His Thr Pro 385 390 395
400 Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys
405 410 415 Thr Ile Thr
Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430 Gly Glu Thr Leu Thr Val Gly Phe
Thr Asp Ser Arg Lys Ile Ser His 435 440
445 Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile
Gly Arg Glu 450 455 460
Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465
470 475 480 Tyr Val Gln Ser
Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met 485
490 495 Pro Pro Asp Thr Pro Asp Arg Thr Leu
Met Thr Gln Gln Ser Gly Asn 500 505
510 Val Lys Ile Thr Val Asn Gly Ser Gly Gly Ser Gly Gly Gln
Thr Val 515 520 525
Arg Tyr Lys Cys Asn Cys Gly Gly Ser Asn Glu Gly Leu Thr Thr Thr 530
535 540 Asp Lys Val Ile Asn
Asn Cys Lys Ile Asp Gln Cys His Ala Ala Val 545 550
555 560 Thr Asn His Lys Asn Trp Gln Tyr Asn Ser
Pro Leu Val Pro Arg Asn 565 570
575 Ala Glu Leu Gly Asp Arg Lys Gly Lys Ile His Ile Pro Phe Pro
Leu 580 585 590 Ala
Asn Val Thr Cys Arg Val Pro Lys Ala Arg Asn Pro Thr Val Thr 595
600 605 Tyr Gly Lys Asn Gln Val
Thr Met Leu Leu Tyr Pro Asp His Pro Thr 610 615
620 Leu Leu Ser Tyr Arg Asn Met Gly Gln Glu Pro
Asn Tyr His Glu Glu 625 630 635
640 Trp Val Thr His Lys Lys Glu Val Thr Leu Thr Val Pro Thr Glu Gly
645 650 655 Leu Glu
Val Thr Trp Gly Asn Asn Glu Pro Tyr Lys Tyr Trp Pro Gln 660
665 670 Met Ser Thr Asn Gly Thr Ala
His Gly His Pro His Glu Ile Ile Leu 675 680
685 Tyr Tyr Tyr Glu Leu Tyr Pro Thr Met Thr Val Val
Ile Val Ser Val 690 695 700
Ala Ser Phe Val Leu Leu Ser Met Val Gly Thr Ala Val Gly Met Cys 705
710 715 720 Val Cys Ala
Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu Thr Pro Gly 725
730 735 Ala Thr Val Pro Phe Leu Leu Ser
Leu Leu Cys Cys Val Arg Thr Thr 740 745
750 Lys Ala Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr Leu Trp
Asn Glu Gln 755 760 765
Gln Pro Leu Phe Trp Leu Gln Ala Leu Ile Pro Leu Ala Ala Leu Ile 770
775 780 Val Leu Cys Asn
Cys Leu Lys Leu Leu Pro Cys Cys Cys Lys Thr Leu 785 790
795 800 Ala Phe Leu Ala Val Met Ser Ile Gly
Ala His Thr Val Ser Ala Tyr 805 810
815 Glu His Val Thr Val Ile Pro Asn Thr Val Gly Val Pro Tyr
Lys Thr 820 825 830
Leu Val Asn Arg Pro Gly Tyr Ser Pro Met Val Leu Glu Met Glu Leu
835 840 845 Gln Ser Val Thr
Leu Glu Pro Thr Leu Ser Leu Asp Tyr Ile Thr Cys 850
855 860 Glu Tyr Lys Thr Val Ile Pro Ser
Pro Tyr Val Lys Cys Cys Gly Thr 865 870
875 880 Ala Glu Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser
Cys Lys Val Phe 885 890
895 Thr Gly Val Tyr Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp
900 905 910 Ala Glu Asn
Thr Gln Leu Ser Glu Ala His Val Glu Lys Ser Glu Ser 915
920 925 Cys Lys Thr Glu Phe Ala Ser Ala
Tyr Arg Ala His Thr Ala Ser Ala 930 935
940 Ser Ala Lys Leu Arg Val Leu Tyr Gln Gly Asn Asn Ile
Thr Val Ala 945 950 955
960 Ala Tyr Ala Asn Gly Asp His Ala Val Thr Val Lys Asp Ala Lys Phe
965 970 975 Val Val Gly Pro
Met Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys Ile 980
985 990 Val Val Tyr Lys Gly Asp Val Tyr
Asn Met Asp Tyr Pro Pro Phe Gly 995 1000
1005 Ala Gly Arg Pro Gly Gln Phe Gly Asp Ile Gln
Ser Arg Thr Pro 1010 1015 1020
Glu Ser Lys Asp Val Tyr Ala Asn Thr Gln Leu Val Leu Gln Arg
1025 1030 1035 Pro Ala Ala
Gly Thr Val His Val Pro Tyr Ser Gln Ala Pro Ser 1040
1045 1050 Gly Phe Lys Tyr Trp Leu Lys Glu
Arg Gly Ala Ser Leu Gln His 1055 1060
1065 Thr Ala Pro Phe Gly Cys Gln Ile Ala Thr Asn Pro Val
Arg Ala 1070 1075 1080
Val Asn Cys Ala Val Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro 1085
1090 1095 Asp Ala Ala Phe Thr
Arg Val Val Asp Ala Pro Ser Val Thr Asp 1100 1105
1110 Met Ser Cys Glu Val Pro Ala Cys Thr His
Ser Ser Asp Phe Gly 1115 1120 1125
Gly Val Ala Ile Ile Lys Tyr Thr Ala Ser Lys Lys Gly Lys Cys
1130 1135 1140 Ala Val
His Ser Met Thr Asn Ala Val Thr Ile Arg Glu Ala Asp 1145
1150 1155 Val Glu Val Glu Gly Asn Ser
Gln Leu Gln Ile Ser Phe Ser Thr 1160 1165
1170 Ala Leu Ala Ser Ala Glu Phe Arg Val Gln Val Cys
Ser Thr Gln 1175 1180 1185
Val His Cys Ala Ala Ala Cys His Pro Pro Lys Asp His Ile Val 1190
1195 1200 Asn Tyr Pro Ala Ser
His Thr Thr Leu Gly Val Gln Asp Ile Ser 1205 1210
1215 Thr Thr Ala Met Ser Trp Val Gln Lys Ile
Thr Gly Gly Val Gly 1220 1225 1230
Leu Ile Val Ala Val Ala Ala Leu Ile Leu Ile Val Val Leu Cys
1235 1240 1245 Val Ser
Phe Ser Arg His 1250 268485DNAArtificial
SequenceSynthetic VLP74_11 (CHI VLP 532_NPNAx6) sequence
26gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgga gttcatcccg acgcaaactt tctataacag aaggtaccaa ccccgaccct
960gggccccacg ccctacaatt caagtaatta gacctagacc acgtccacag aggcaggctg
1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac catgcgcgcg gtacctcaac
1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca gaagaagcag gcgccgcaaa
1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc ggctcaaaag aagaagaaac
1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga ttgcatcttc gaagtcaagc
1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga taaagtaatg aaaccagcac
1320atgtgaaggg aactatcgac aatgccgatc tggctaaact ggcctttaag cggtcgtcta
1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa gtctgatgcc tcgaagttta
1440cccacgagaa acccgagggg tactataact ggcatcacgg agcagtgcag tattcaggag
1500gccggttcac tatcccgacg ggtgcaggca agccgggaga cagcggcaga ccgatcttcg
1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc caacgaaggt gcccgcacgg
1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa aattacccct gagggagccg
1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc aaacactaca ttcccctgct
1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc ggaaagcacc ttgcgcatgc
1800ttgaggacaa cgtgatgaga cccggatact accagctact aaaagcatcg ctgacttgct
1860ctccccaccg ccaaagacgc agtactaagg acaattttaa tgtctataaa gccacaagac
1920catatctagc tcattgtcct gactgcggag aagggcattc gtgccacagc cctatcgcat
1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa aatccaggtc tctttgcaga
2040tcgggataaa gacagatgac agccacgatt ggaccaagct gcgctatatg gatagccata
2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac ttcagcaccg tgcacgatca
2160ccgggaccat gggacacttt attctcgccc gatgcccgaa aggagagacg ctgacagtgg
2220gatttacgga cagcagaaag atcagccaca catgcacaca cccgttccat catgaaccac
2280ctgtgatagg tagggagagg ttccactctc gaccacaaca tggtaaagag ttaccttgca
2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat agaggtgcat atgcccccag
2400atactcctga ccgcacgctg atgacgcagc agtctggcaa cgtgaagatc acagttaatg
2460ggcagacggt gcggtacaag tgcaactgcg gtggctccgg aggaaacccg aatgccaatc
2520ccaacgcgaa ccccaatgct aacccaaatg ccaacccaaa cgccaacccc aacgctggtg
2580gatccaacga gggactgaca accacagaca aagtgatcaa taactgcaaa attgatcagt
2640gccatgctgc agtcactaat cacaagaatt ggcaatacaa ctccccttta gtcccgcgca
2700acgctgaact cggggaccgt aaaggaaaga tccacatccc attcccattg gcaaacgtga
2760cttgcagagt gccaaaagca agaaacccta cagtaactta cggaaaaaac caagtcacca
2820tgctgctgta tcctgaccat ccgacactct tgtcttaccg taacatggga caggaaccaa
2880attaccacga ggagtgggtg acacacaaga aggaggttac cttgaccgtg cctactgagg
2940gtctggaggt cacttggggc aacaacgaac catacaagta ctggccgcag atgtctacga
3000acggtactgc tcatggtcac ccacatgaga taatcttgta ctattatgag ctgtacccca
3060ctatgactgt agtcattgtg tcggtggcct cgttcgtgct tctgtcgatg gtgggcacag
3120cagtgggaat gtgtgtgtgc gcacggcgca gatgcattac accatatgaa ttaacaccag
3180gagccactgt tcccttcctg ctcagcctgc tatgctgcgt cagaacgacc aaggcggcca
3240catattacga ggctgcggca tatctatgga acgaacagca gcccctgttc tggttgcagg
3300ctcttatccc gctggccgcc ttgatcgtcc tgtgcaactg tctgaaactc ttgccatgct
3360gctgtaagac cctggctttt ttagccgtaa tgagcatcgg tgcccacact gtgagcgcgt
3420acgaacacgt aacagtgatc ccgaacacgg tgggagtacc gtataagact cttgtcaaca
3480gaccgggtta cagccccatg gtgttggaga tggagctaca atcagtcacc ttggaaccaa
3540cactgtcact tgactacatc acgtgcgagt acaaaactgt catcccctcc ccgtacgtga
3600agtgctgtgg tacagcagag tgcaaggaca agagcctacc agactacagc tgcaaggtct
3660ttactggagt ctacccattt atgtggggcg gcgcctactg cttttgcgac gccgaaaata
3720cgcaattgag cgaggcacat gtagagaaat ctgaatcttg caaaacagag tttgcatcgg
3780cctacagagc ccacaccgca tcggcgtcgg cgaagctccg cgtcctttac caaggaaaca
3840acattaccgt agctgcctac gctaacggtg accatgccgt cacagtaaag gacgccaagt
3900ttgtcgtggg cccaatgtcc tccgcctgga caccttttga caacaaaatc gtggtgtaca
3960aaggcgacgt ctacaacatg gactacccac cttttggcgc aggaagacca ggacaatttg
4020gtgacattca aagtcgtaca ccggaaagta aagacgttta tgccaacact cagttggtac
4080tacagaggcc agcagcaggc acggtacatg taccatactc tcaggcacca tctggcttca
4140agtattggct gaaggaacga ggagcatcgc tacagcacac ggcaccgttc ggttgccaga
4200ttgcgacaaa cccggtaaga gctgtaaatt gcgctgtggg gaacatacca atttccatcg
4260acataccgga tgcggccttt actagggttg tcgatgcacc ctctgtaacg gacatgtcat
4320gcgaagtacc agcctgcact cactcctccg actttggggg cgtcgccatc atcaaataca
4380cagctagcaa gaaaggtaaa tgtgcagtac attcgatgac caacgccgtt accattcgag
4440aagccgacgt agaagtagag gggaactccc agctgcaaat atccttctca acagccctgg
4500caagcgccga gtttcgcgtg caagtgtgct ccacacaagt acactgcgca gccgcatgcc
4560accctccaaa ggaccacata gtcaattacc cagcatcaca caccaccctt ggggtccagg
4620atatatccac aacggcaatg tcttgggtgc agaagattac gggaggagta ggattaattg
4680ttgctgttgc tgccttaatt ttaattgtgg tgctatgcgt gtcgtttagc aggcactaag
4740gatctagatc tgctgtgcct tctagttgcc agccatctgt tgtttgcccc tcccccgtgc
4800cttccttgac cctggaaggt gccactccca ctgtcctttc ctaataaaat gaggaaattg
4860catcgcattg tctgagtagg tgtcattcta ttctgggggg tggggtgggg caggacagca
4920agggggagga ttgggaagac aatagcaggc atgctgggga tgcggtgggc tctatgggta
4980cccaggtgct gaagaattga cccggttcct cctgggccag aaagaagcag gcacatcccc
5040ttctctgtga cacaccctgt ccacgcccct ggttcttagt tccagcccca ctcataggac
5100actcatagct caggagggct ccgccttcaa tcccacccgc taaagtactt ggagcggtct
5160ctccctccct catcagccca ccaaaccaaa cctagcctcc aagagtggga agaaattaaa
5220gcaagatagg ctattaagtg cagagggaga gaaaatgcct ccaacatgtg aggaagtaat
5280gagagaaatc atagaatttt aaggccatga tttaaggcca tcatggccta agcttgaaag
5340gagataggat caaagcttgg cgtaatcatg gtcatagctg tttcctgtgt gaaattgtta
5400tccgctcaca attccacaca acatacgagc cggaagcata aagtgtaaag cctggggtgc
5460ctaatgagtg agctaactca cattaattgc gttgcgctca ctgcccgctt tccagtcggg
5520aaacctgtcg tgccagctgc attaatgaat cggccaacgc gcggggagag gcggtttgcg
5580tattgggcgc tcttccgctt cctcgctcac tgactcgctg cgctcggtcg ttcggctgcg
5640gcgagcggta tcagctcact caaaggcggt aatacggtta tccacagaat caggggataa
5700cgcaggaaag aacatgtgag caaaaggcca gcaaaaggcc aggaaccgta aaaaggccgc
5760gttgctggcg tttttccata ggctccgccc ccctgacgag catcacaaaa atcgacgctc
5820aagtcagagg tggcgaaacc cgacaggact ataaagatac caggcgtttc cccctggaag
5880ctccctcgtg cgctctcctg ttccgaccct gccgcttacc ggatacctgt ccgcctttct
5940cccttcggga agcgtggcgc tttctcatag ctcacgctgt aggtatctca gttcggtgta
6000ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc gttcagcccg accgctgcgc
6060cttatccggt aactatcgtc ttgagtccaa cccggtaaga cacgacttat cgccactggc
6120agcagccact ggtaacagga ttagcagagc gaggtatgta ggcggtgcta cagagttctt
6180gaagtggtgg cctaactacg gctacactag aagaacagta tttggtatct gcgctctgct
6240gaagccagtt accttcggaa aaagagttgg tagctcttga tccggcaaac aaaccaccgc
6300tggtagcggt ggtttttttg tttgcaagca gcagattacg cgcagaaaaa aaggatctca
6360agaagatcct ttgatctttt ctacggggtc tgacgctcag tggaacgaaa actcacgtta
6420agggattttg gtcatgagat tatcaaaaag gatcttcacc tagatccttt taaattaaaa
6480atgaagtttt aaatcaatct aaagtatata tgagtaaact tggtctgaca gttaccaatg
6540cttaatcagt gaggcaccta tctcagcgat ctgtctattt cgttcatcca tagttgcctg
6600actccccgtc gtgtagataa ctacgatacg ggagggctta ccatctggcc ccagtgctgc
6660aatgataccg cgagaaccac gctcaccggc tccagattta tcagcaataa accagccagc
6720cggaagggcc gagcgcagaa gtggtcctgc aactttatcc gcctccatcc agtctattaa
6780ttgttgccgg gaagctagag taagtagttc gccagttaat agtttgcgca acgttgttgc
6840cattgctaca ggcatcgtgg tgtcacgctc gtcgtttggt atggcttcat tcagctccgg
6900ttcccaacga tcaaggcgag ttacatgatc ccccatgttg tgcaaaaaag cggttagctc
6960cttcggtcct ccgatcgttg tcagaagtaa gttggccgca gtgttatcac tcatggttat
7020ggcagcactg cataattctc ttactgtcat gccatccgta agatgctttt ctgtgactgg
7080tgagtactca accaagtcat tctgagaata gtgtatgcgg cgaccgagtt gctcttgccc
7140ggcgtcaata cgggataata ccgcgccaca tagcagaact ttaaaagtgc tcatcattgg
7200aaaacgttct tcggggcgaa aactctcaag gatcttaccg ctgttgagat ccagttcgat
7260gtaacccact cgtgcaccca actgatcttc agcatctttt actttcacca gcgtttctgg
7320gtgagcaaaa acaggaaggc aaaatgccgc aaaaaaggga ataagggcga cacggaaatg
7380ttgaatactc atactcttcc tttttcaata ttattgaagc atttatcagg gttattgtct
7440catgagcgga tacatatttg aatgtattta gaaaaataaa caaatagggg ttccgcgcac
7500atttccccga aaagtgccac ctgacgtcta agaaaccatt attatcatga cattaaccta
7560taaaaatagg cgtatcacga ggccctttcg ggtcgcgcgt ttcggtgatg acggtgaaaa
7620cctctgacac atgcagctcc cgttgacggt cacagcttgt ctgtaagcgg atgccgggag
7680cagacaagcc cgtcagggcg cgtcagcggg tgttggcggg tgtcggggct ggcttaacta
7740tgcggcatca gagcagattg tactgagagt gcaccataaa attgtaaacg ttaatatttt
7800gttaaaattc gcgttaaatt tttgttaaat cagctcattt tttaaccaat aggccgaaat
7860cggcaaaatc ccttataaat caaaagaata gcccgagata gggttgagtg ttgttccagt
7920ttggaacaag agtccactat taaagaacgt ggactccaac gtcaaagggc gaaaaaccgt
7980ctatcagggc gatggcccac tacgtgaacc atcacccaaa tcaagttttt tggggtcgag
8040gtgccgtaaa gcactaaatc ggaaccctaa agggagcccc cgatttagag cttgacgggg
8100aaagccggcg aacgtggcga gaaaggaagg gaagaaagcg aaaggagcgg gcgctagggc
8160gctggcaagt gtagcggtca cgctgcgcgt aaccaccaca cccgccgcgc ttaatgcgcc
8220gctacagggc gcgtactatg gttgctttga cgtatgcggt gtgaaatacc gcacagatgc
8280gtaaggagaa aataccgcat caggcgccat tcgccattca ggctgcgcaa ctgttgggaa
8340gggcgatcgg tgcgggcctc ttcgctatta cgccagctgg cgaaaggggg atgtgctgca
8400aggcgattaa gttgggtaac gccagggttt tcccagtcac gacgttgtaa aacgacggcc
8460agtgaattcc atggtctcaa ctttc
8485273831DNAArtificial SequenceSynthetic VLP74_11 (CHI VLP 532 NPNAx6)
CHIKV-NPNAx6 sequence 27atggagttca tcccgacgca aactttctat aacagaaggt
accaaccccg accctgggcc 60ccacgcccta caattcaagt aattagacct agaccacgtc
cacagaggca ggctgggcaa 120ctcgcccagc tgatctccgc agtcaacaaa ttgaccatgc
gcgcggtacc tcaacagaag 180cctcgcagaa atcggaaaaa caagaagcaa aggcagaaga
agcaggcgcc gcaaaacgac 240ccaaagcaaa agaagcaacc accacaaaag aagccggctc
aaaagaagaa gaaaccaggc 300cgtagggaga gaatgtgcat gaaaattgaa aatgattgca
tcttcgaagt caagcatgaa 360ggcaaagtga tgggctacgc atgcctggtg ggggataaag
taatgaaacc agcacatgtg 420aagggaacta tcgacaatgc cgatctggct aaactggcct
ttaagcggtc gtctaaatac 480gatcttgaat gtgcacagat accggtgcac atgaagtctg
atgcctcgaa gtttacccac 540gagaaacccg aggggtacta taactggcat cacggagcag
tgcagtattc aggaggccgg 600ttcactatcc cgacgggtgc aggcaagccg ggagacagcg
gcagaccgat cttcgacaac 660aaaggacggg tggtggccat cgtcctagga ggggccaacg
aaggtgcccg cacggccctc 720tccgtggtga cgtggaacaa agacatcgtc acaaaaatta
cccctgaggg agccgaagag 780tggagcctcg ccctcccggt cttgtgcctg ttggcaaaca
ctacattccc ctgctctcag 840ccgccttgca caccctgctg ctacgaaaag gaaccggaaa
gcaccttgcg catgcttgag 900gacaacgtga tgagacccgg atactaccag ctactaaaag
catcgctgac ttgctctccc 960caccgccaaa gacgcagtac taaggacaat tttaatgtct
ataaagccac aagaccatat 1020ctagctcatt gtcctgactg cggagaaggg cattcgtgcc
acagccctat cgcattggag 1080cgcatcagaa atgaagcaac ggacggaacg ctgaaaatcc
aggtctcttt gcagatcggg 1140ataaagacag atgacagcca cgattggacc aagctgcgct
atatggatag ccatacgcca 1200gcggacgcgg agcgagccgg attgcttgta aggacttcag
caccgtgcac gatcaccggg 1260accatgggac actttattct cgcccgatgc ccgaaaggag
agacgctgac agtgggattt 1320acggacagca gaaagatcag ccacacatgc acacacccgt
tccatcatga accacctgtg 1380ataggtaggg agaggttcca ctctcgacca caacatggta
aagagttacc ttgcagcacg 1440tacgtgcaga gcaccgctgc cactgctgag gagatagagg
tgcatatgcc cccagatact 1500cctgaccgca cgctgatgac gcagcagtct ggcaacgtga
agatcacagt taatgggcag 1560acggtgcggt acaagtgcaa ctgcggtggc tccggaggaa
acccgaatgc caatcccaac 1620gcgaacccca atgctaaccc aaatgccaac ccaaacgcca
accccaacgc tggtggatcc 1680aacgagggac tgacaaccac agacaaagtg atcaataact
gcaaaattga tcagtgccat 1740gctgcagtca ctaatcacaa gaattggcaa tacaactccc
ctttagtccc gcgcaacgct 1800gaactcgggg accgtaaagg aaagatccac atcccattcc
cattggcaaa cgtgacttgc 1860agagtgccaa aagcaagaaa ccctacagta acttacggaa
aaaaccaagt caccatgctg 1920ctgtatcctg accatccgac actcttgtct taccgtaaca
tgggacagga accaaattac 1980cacgaggagt gggtgacaca caagaaggag gttaccttga
ccgtgcctac tgagggtctg 2040gaggtcactt ggggcaacaa cgaaccatac aagtactggc
cgcagatgtc tacgaacggt 2100actgctcatg gtcacccaca tgagataatc ttgtactatt
atgagctgta ccccactatg 2160actgtagtca ttgtgtcggt ggcctcgttc gtgcttctgt
cgatggtggg cacagcagtg 2220ggaatgtgtg tgtgcgcacg gcgcagatgc attacaccat
atgaattaac accaggagcc 2280actgttccct tcctgctcag cctgctatgc tgcgtcagaa
cgaccaaggc ggccacatat 2340tacgaggctg cggcatatct atggaacgaa cagcagcccc
tgttctggtt gcaggctctt 2400atcccgctgg ccgccttgat cgtcctgtgc aactgtctga
aactcttgcc atgctgctgt 2460aagaccctgg cttttttagc cgtaatgagc atcggtgccc
acactgtgag cgcgtacgaa 2520cacgtaacag tgatcccgaa cacggtggga gtaccgtata
agactcttgt caacagaccg 2580ggttacagcc ccatggtgtt ggagatggag ctacaatcag
tcaccttgga accaacactg 2640tcacttgact acatcacgtg cgagtacaaa actgtcatcc
cctccccgta cgtgaagtgc 2700tgtggtacag cagagtgcaa ggacaagagc ctaccagact
acagctgcaa ggtctttact 2760ggagtctacc catttatgtg gggcggcgcc tactgctttt
gcgacgccga aaatacgcaa 2820ttgagcgagg cacatgtaga gaaatctgaa tcttgcaaaa
cagagtttgc atcggcctac 2880agagcccaca ccgcatcggc gtcggcgaag ctccgcgtcc
tttaccaagg aaacaacatt 2940accgtagctg cctacgctaa cggtgaccat gccgtcacag
taaaggacgc caagtttgtc 3000gtgggcccaa tgtcctccgc ctggacacct tttgacaaca
aaatcgtggt gtacaaaggc 3060gacgtctaca acatggacta cccacctttt ggcgcaggaa
gaccaggaca atttggtgac 3120attcaaagtc gtacaccgga aagtaaagac gtttatgcca
acactcagtt ggtactacag 3180aggccagcag caggcacggt acatgtacca tactctcagg
caccatctgg cttcaagtat 3240tggctgaagg aacgaggagc atcgctacag cacacggcac
cgttcggttg ccagattgcg 3300acaaacccgg taagagctgt aaattgcgct gtggggaaca
taccaatttc catcgacata 3360ccggatgcgg cctttactag ggttgtcgat gcaccctctg
taacggacat gtcatgcgaa 3420gtaccagcct gcactcactc ctccgacttt gggggcgtcg
ccatcatcaa atacacagct 3480agcaagaaag gtaaatgtgc agtacattcg atgaccaacg
ccgttaccat tcgagaagcc 3540gacgtagaag tagaggggaa ctcccagctg caaatatcct
tctcaacagc cctggcaagc 3600gccgagtttc gcgtgcaagt gtgctccaca caagtacact
gcgcagccgc atgccaccct 3660ccaaaggacc acatagtcaa ttacccagca tcacacacca
cccttggggt ccaggatata 3720tccacaacgg caatgtcttg ggtgcagaag attacgggag
gagtaggatt aattgttgct 3780gttgctgcct taattttaat tgtggtgcta tgcgtgtcgt
ttagcaggca c 3831281277PRTArtificial SequenceSynthetic
VLP74_11 (CHI VLP 532 NPNAx6) sequence 28Met Glu Phe Ile Pro Thr
Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro 1 5
10 15 Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val
Ile Arg Pro Arg Pro 20 25
30 Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala
Val 35 40 45 Asn
Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60 Arg Lys Asn Lys Lys Gln
Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp 65 70
75 80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys
Pro Ala Gln Lys Lys 85 90
95 Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp
100 105 110 Cys Ile
Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys 115
120 125 Leu Val Gly Asp Lys Val Met
Lys Pro Ala His Val Lys Gly Thr Ile 130 135
140 Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg
Ser Ser Lys Tyr 145 150 155
160 Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175 Lys Phe Thr
His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190 Ala Val Gln Tyr Ser Gly Gly Arg
Phe Thr Ile Pro Thr Gly Ala Gly 195 200
205 Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys
Gly Arg Val 210 215 220
Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225
230 235 240 Ser Val Val Thr
Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu 245
250 255 Gly Ala Glu Glu Trp Ser Leu Ala Leu
Pro Val Leu Cys Leu Leu Ala 260 265
270 Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys
Cys Tyr 275 280 285
Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300 Arg Pro Gly Tyr Tyr
Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305 310
315 320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn
Phe Asn Val Tyr Lys Ala 325 330
335 Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His
Ser 340 345 350 Cys
His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365 Gly Thr Leu Lys Ile Gln
Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370 375
380 Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met
Asp Ser His Thr Pro 385 390 395
400 Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys
405 410 415 Thr Ile
Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430 Gly Glu Thr Leu Thr Val Gly
Phe Thr Asp Ser Arg Lys Ile Ser His 435 440
445 Thr Cys Thr His Pro Phe His His Glu Pro Pro Val
Ile Gly Arg Glu 450 455 460
Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465
470 475 480 Tyr Val Gln
Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met 485
490 495 Pro Pro Asp Thr Pro Asp Arg Thr
Leu Met Thr Gln Gln Ser Gly Asn 500 505
510 Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys
Cys Asn Cys 515 520 525
Gly Gly Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540 Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser 545 550
555 560 Asn Glu Gly Leu Thr Thr Thr Asp Lys
Val Ile Asn Asn Cys Lys Ile 565 570
575 Asp Gln Cys His Ala Ala Val Thr Asn His Lys Asn Trp Gln
Tyr Asn 580 585 590
Ser Pro Leu Val Pro Arg Asn Ala Glu Leu Gly Asp Arg Lys Gly Lys
595 600 605 Ile His Ile Pro
Phe Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys 610
615 620 Ala Arg Asn Pro Thr Val Thr Tyr
Gly Lys Asn Gln Val Thr Met Leu 625 630
635 640 Leu Tyr Pro Asp His Pro Thr Leu Leu Ser Tyr Arg
Asn Met Gly Gln 645 650
655 Glu Pro Asn Tyr His Glu Glu Trp Val Thr His Lys Lys Glu Val Thr
660 665 670 Leu Thr Val
Pro Thr Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu 675
680 685 Pro Tyr Lys Tyr Trp Pro Gln Met
Ser Thr Asn Gly Thr Ala His Gly 690 695
700 His Pro His Glu Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr
Pro Thr Met 705 710 715
720 Thr Val Val Ile Val Ser Val Ala Ser Phe Val Leu Leu Ser Met Val
725 730 735 Gly Thr Ala Val
Gly Met Cys Val Cys Ala Arg Arg Arg Cys Ile Thr 740
745 750 Pro Tyr Glu Leu Thr Pro Gly Ala Thr
Val Pro Phe Leu Leu Ser Leu 755 760
765 Leu Cys Cys Val Arg Thr Thr Lys Ala Ala Thr Tyr Tyr Glu
Ala Ala 770 775 780
Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp Leu Gln Ala Leu 785
790 795 800 Ile Pro Leu Ala Ala
Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu 805
810 815 Pro Cys Cys Cys Lys Thr Leu Ala Phe Leu
Ala Val Met Ser Ile Gly 820 825
830 Ala His Thr Val Ser Ala Tyr Glu His Val Thr Val Ile Pro Asn
Thr 835 840 845 Val
Gly Val Pro Tyr Lys Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro 850
855 860 Met Val Leu Glu Met Glu
Leu Gln Ser Val Thr Leu Glu Pro Thr Leu 865 870
875 880 Ser Leu Asp Tyr Ile Thr Cys Glu Tyr Lys Thr
Val Ile Pro Ser Pro 885 890
895 Tyr Val Lys Cys Cys Gly Thr Ala Glu Cys Lys Asp Lys Ser Leu Pro
900 905 910 Asp Tyr
Ser Cys Lys Val Phe Thr Gly Val Tyr Pro Phe Met Trp Gly 915
920 925 Gly Ala Tyr Cys Phe Cys Asp
Ala Glu Asn Thr Gln Leu Ser Glu Ala 930 935
940 His Val Glu Lys Ser Glu Ser Cys Lys Thr Glu Phe
Ala Ser Ala Tyr 945 950 955
960 Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val Leu Tyr Gln
965 970 975 Gly Asn Asn
Ile Thr Val Ala Ala Tyr Ala Asn Gly Asp His Ala Val 980
985 990 Thr Val Lys Asp Ala Lys Phe Val
Val Gly Pro Met Ser Ser Ala Trp 995 1000
1005 Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys
Gly Asp Val Tyr 1010 1015 1020
Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg Pro Gly Gln Phe
1025 1030 1035 Gly Asp Ile
Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr Ala 1040
1045 1050 Asn Thr Gln Leu Val Leu Gln Arg
Pro Ala Ala Gly Thr Val His 1055 1060
1065 Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp
Leu Lys 1070 1075 1080
Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe Gly Cys Gln 1085
1090 1095 Ile Ala Thr Asn Pro
Val Arg Ala Val Asn Cys Ala Val Gly Asn 1100 1105
1110 Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala
Ala Phe Thr Arg Val 1115 1120 1125
Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu Val Pro Ala
1130 1135 1140 Cys Thr
His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys Tyr 1145
1150 1155 Thr Ala Ser Lys Lys Gly Lys
Cys Ala Val His Ser Met Thr Asn 1160 1165
1170 Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu
Gly Asn Ser 1175 1180 1185
Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu Phe 1190
1195 1200 Arg Val Gln Val Cys
Ser Thr Gln Val His Cys Ala Ala Ala Cys 1205 1210
1215 His Pro Pro Lys Asp His Ile Val Asn Tyr
Pro Ala Ser His Thr 1220 1225 1230
Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser Trp Val
1235 1240 1245 Gln Lys
Ile Thr Gly Gly Val Gly Leu Ile Val Ala Val Ala Ala 1250
1255 1260 Leu Ile Leu Ile Val Val Leu
Cys Val Ser Phe Ser Arg His 1265 1270
1275 298713DNAArtificial SequenceSynthetic VLP78_11 (CHI VLP 532
NPNAx25) sequence 29gaattcccat tgcatacgtt gtatccatat cataatatgt
acatttatat tggctcatgt 60ccaacattac cgccatgttg acattgatta ttgactagtt
attaatagta atcaattacg 120gggtcattag ttcatagccc atatatggag ttccgcgtta
cataacttac ggtaaatggc 180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt
caataatgac gtatgttccc 240atagtaacgc caatagggac tttccattga cgtcaatggg
tggagtattt acggtaaact 300gcccacttgg cagtacatca agtgtatcat atgccaagta
cgccccctat tgacgtcaat 360gacggtaaat ggcccgcctg gcattatgcc cagtacatga
ccttatggga ctttcctact 420tggcagtaca tctacgtatt agtcatcgct attaccatgg
tgatgcggtt ttggcagtac 480atcaatgggc gtggatagcg gtttgactca cggggatttc
caagtctcca ccccattgac 540gtcaatggga gtttgttttg gcaccaaaat caacgggact
ttccaaaatg tcgtaacaac 600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt
gggaggtcta tataagcaga 660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc
cacgctgttt tgacctccat 720agaagacacc gggaccgatc cagcctccgt taacggtgga
gggcagtgta gtctgagcag 780tactcgttgc tgccgcgcgc gccaccagac ataatagctg
acagactaac agactgttcc 840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt
gtgatcagat atcgcggccg 900ccaccatgga gttcatcccg acgcaaactt tctataacag
aaggtaccaa ccccgaccct 960gggccccacg ccctacaatt caagtaatta gacctagacc
acgtccacag aggcaggctg 1020ggcaactcgc ccagctgatc tccgcagtca acaaattgac
catgcgcgcg gtacctcaac 1080agaagcctcg cagaaatcgg aaaaacaaga agcaaaggca
gaagaagcag gcgccgcaaa 1140acgacccaaa gcaaaagaag caaccaccac aaaagaagcc
ggctcaaaag aagaagaaac 1200caggccgtag ggagagaatg tgcatgaaaa ttgaaaatga
ttgcatcttc gaagtcaagc 1260atgaaggcaa agtgatgggc tacgcatgcc tggtggggga
taaagtaatg aaaccagcac 1320atgtgaaggg aactatcgac aatgccgatc tggctaaact
ggcctttaag cggtcgtcta 1380aatacgatct tgaatgtgca cagataccgg tgcacatgaa
gtctgatgcc tcgaagttta 1440cccacgagaa acccgagggg tactataact ggcatcacgg
agcagtgcag tattcaggag 1500gccggttcac tatcccgacg ggtgcaggca agccgggaga
cagcggcaga ccgatcttcg 1560acaacaaagg acgggtggtg gccatcgtcc taggaggggc
caacgaaggt gcccgcacgg 1620ccctctccgt ggtgacgtgg aacaaagaca tcgtcacaaa
aattacccct gagggagccg 1680aagagtggag cctcgccctc ccggtcttgt gcctgttggc
aaacactaca ttcccctgct 1740ctcagccgcc ttgcacaccc tgctgctacg aaaaggaacc
ggaaagcacc ttgcgcatgc 1800ttgaggacaa cgtgatgaga cccggatact accagctact
aaaagcatcg ctgacttgct 1860ctccccaccg ccaaagacgc agtactaagg acaattttaa
tgtctataaa gccacaagac 1920catatctagc tcattgtcct gactgcggag aagggcattc
gtgccacagc cctatcgcat 1980tggagcgcat cagaaatgaa gcaacggacg gaacgctgaa
aatccaggtc tctttgcaga 2040tcgggataaa gacagatgac agccacgatt ggaccaagct
gcgctatatg gatagccata 2100cgccagcgga cgcggagcga gccggattgc ttgtaaggac
ttcagcaccg tgcacgatca 2160ccgggaccat gggacacttt attctcgccc gatgcccgaa
aggagagacg ctgacagtgg 2220gatttacgga cagcagaaag atcagccaca catgcacaca
cccgttccat catgaaccac 2280ctgtgatagg tagggagagg ttccactctc gaccacaaca
tggtaaagag ttaccttgca 2340gcacgtacgt gcagagcacc gctgccactg ctgaggagat
agaggtgcat atgcccccag 2400atactcctga ccgcacgctg atgacgcagc agtctggcaa
cgtgaagatc acagttaatg 2460ggcagacggt gcggtacaag tgcaactgcg gtggctccgg
aggaaacccg aatgccaatc 2520ccaacgcgaa ccccaacgct aaccccaacg ccaatccgaa
tgcaaacccg aacgttgacc 2580caaacgccaa cccgaatgcc aatcccaacg cgaaccccaa
tgctaaccca aatgccaacc 2640caaacgccaa ccccaacgct aatccaaacg ccaaccctaa
cgccaatccc aacgcgaatc 2700ctaacgctaa tcccaacgca aatcccaatg ctaatccgaa
cgcgaaccct aatgcaaacc 2760ccaacgccaa cccgaacgct aacccgaacg ctaatcccaa
cgccggtgga tccaacgagg 2820gactgacaac cacagacaaa gtgatcaata actgcaaaat
tgatcagtgc catgctgcag 2880tcactaatca caagaattgg caatacaact cccctttagt
cccgcgcaac gctgaactcg 2940gggaccgtaa aggaaagatc cacatcccat tcccattggc
aaacgtgact tgcagagtgc 3000caaaagcaag aaaccctaca gtaacttacg gaaaaaacca
agtcaccatg ctgctgtatc 3060ctgaccatcc gacactcttg tcttaccgta acatgggaca
ggaaccaaat taccacgagg 3120agtgggtgac acacaagaag gaggttacct tgaccgtgcc
tactgagggt ctggaggtca 3180cttggggcaa caacgaacca tacaagtact ggccgcagat
gtctacgaac ggtactgctc 3240atggtcaccc acatgagata atcttgtact attatgagct
gtaccccact atgactgtag 3300tcattgtgtc ggtggcctcg ttcgtgcttc tgtcgatggt
gggcacagca gtgggaatgt 3360gtgtgtgcgc acggcgcaga tgcattacac catatgaatt
aacaccagga gccactgttc 3420ccttcctgct cagcctgcta tgctgcgtca gaacgaccaa
ggcggccaca tattacgagg 3480ctgcggcata tctatggaac gaacagcagc ccctgttctg
gttgcaggct cttatcccgc 3540tggccgcctt gatcgtcctg tgcaactgtc tgaaactctt
gccatgctgc tgtaagaccc 3600tggctttttt agccgtaatg agcatcggtg cccacactgt
gagcgcgtac gaacacgtaa 3660cagtgatccc gaacacggtg ggagtaccgt ataagactct
tgtcaacaga ccgggttaca 3720gccccatggt gttggagatg gagctacaat cagtcacctt
ggaaccaaca ctgtcacttg 3780actacatcac gtgcgagtac aaaactgtca tcccctcccc
gtacgtgaag tgctgtggta 3840cagcagagtg caaggacaag agcctaccag actacagctg
caaggtcttt actggagtct 3900acccatttat gtggggcggc gcctactgct tttgcgacgc
cgaaaatacg caattgagcg 3960aggcacatgt agagaaatct gaatcttgca aaacagagtt
tgcatcggcc tacagagccc 4020acaccgcatc ggcgtcggcg aagctccgcg tcctttacca
aggaaacaac attaccgtag 4080ctgcctacgc taacggtgac catgccgtca cagtaaagga
cgccaagttt gtcgtgggcc 4140caatgtcctc cgcctggaca ccttttgaca acaaaatcgt
ggtgtacaaa ggcgacgtct 4200acaacatgga ctacccacct tttggcgcag gaagaccagg
acaatttggt gacattcaaa 4260gtcgtacacc ggaaagtaaa gacgtttatg ccaacactca
gttggtacta cagaggccag 4320cagcaggcac ggtacatgta ccatactctc aggcaccatc
tggcttcaag tattggctga 4380aggaacgagg agcatcgcta cagcacacgg caccgttcgg
ttgccagatt gcgacaaacc 4440cggtaagagc tgtaaattgc gctgtgggga acataccaat
ttccatcgac ataccggatg 4500cggcctttac tagggttgtc gatgcaccct ctgtaacgga
catgtcatgc gaagtaccag 4560cctgcactca ctcctccgac tttgggggcg tcgccatcat
caaatacaca gctagcaaga 4620aaggtaaatg tgcagtacat tcgatgacca acgccgttac
cattcgagaa gccgacgtag 4680aagtagaggg gaactcccag ctgcaaatat ccttctcaac
agccctggca agcgccgagt 4740ttcgcgtgca agtgtgctcc acacaagtac actgcgcagc
cgcatgccac cctccaaagg 4800accacatagt caattaccca gcatcacaca ccacccttgg
ggtccaggat atatccacaa 4860cggcaatgtc ttgggtgcag aagattacgg gaggagtagg
attaattgtt gctgttgctg 4920ccttaatttt aattgtggtg ctatgcgtgt cgtttagcag
gcactaagga tctagatctg 4980ctgtgccttc tagttgccag ccatctgttg tttgcccctc
ccccgtgcct tccttgaccc 5040tggaaggtgc cactcccact gtcctttcct aataaaatga
ggaaattgca tcgcattgtc 5100tgagtaggtg tcattctatt ctggggggtg gggtggggca
ggacagcaag ggggaggatt 5160gggaagacaa tagcaggcat gctggggatg cggtgggctc
tatgggtacc caggtgctga 5220agaattgacc cggttcctcc tgggccagaa agaagcaggc
acatcccctt ctctgtgaca 5280caccctgtcc acgcccctgg ttcttagttc cagccccact
cataggacac tcatagctca 5340ggagggctcc gccttcaatc ccacccgcta aagtacttgg
agcggtctct ccctccctca 5400tcagcccacc aaaccaaacc tagcctccaa gagtgggaag
aaattaaagc aagataggct 5460attaagtgca gagggagaga aaatgcctcc aacatgtgag
gaagtaatga gagaaatcat 5520agaattttaa ggccatgatt taaggccatc atggcctaag
cttgaaagga gataggatca 5580aagcttggcg taatcatggt catagctgtt tcctgtgtga
aattgttatc cgctcacaat 5640tccacacaac atacgagccg gaagcataaa gtgtaaagcc
tggggtgcct aatgagtgag 5700ctaactcaca ttaattgcgt tgcgctcact gcccgctttc
cagtcgggaa acctgtcgtg 5760ccagctgcat taatgaatcg gccaacgcgc ggggagaggc
ggtttgcgta ttgggcgctc 5820ttccgcttcc tcgctcactg actcgctgcg ctcggtcgtt
cggctgcggc gagcggtatc 5880agctcactca aaggcggtaa tacggttatc cacagaatca
ggggataacg caggaaagaa 5940catgtgagca aaaggccagc aaaaggccag gaaccgtaaa
aaggccgcgt tgctggcgtt 6000tttccatagg ctccgccccc ctgacgagca tcacaaaaat
cgacgctcaa gtcagaggtg 6060gcgaaacccg acaggactat aaagatacca ggcgtttccc
cctggaagct ccctcgtgcg 6120ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc
gcctttctcc cttcgggaag 6180cgtggcgctt tctcatagct cacgctgtag gtatctcagt
tcggtgtagg tcgttcgctc 6240caagctgggc tgtgtgcacg aaccccccgt tcagcccgac
cgctgcgcct tatccggtaa 6300ctatcgtctt gagtccaacc cggtaagaca cgacttatcg
ccactggcag cagccactgg 6360taacaggatt agcagagcga ggtatgtagg cggtgctaca
gagttcttga agtggtggcc 6420taactacggc tacactagaa gaacagtatt tggtatctgc
gctctgctga agccagttac 6480cttcggaaaa agagttggta gctcttgatc cggcaaacaa
accaccgctg gtagcggtgg 6540tttttttgtt tgcaagcagc agattacgcg cagaaaaaaa
ggatctcaag aagatccttt 6600gatcttttct acggggtctg acgctcagtg gaacgaaaac
tcacgttaag ggattttggt 6660catgagatta tcaaaaagga tcttcaccta gatcctttta
aattaaaaat gaagttttaa 6720atcaatctaa agtatatatg agtaaacttg gtctgacagt
taccaatgct taatcagtga 6780ggcacctatc tcagcgatct gtctatttcg ttcatccata
gttgcctgac tccccgtcgt 6840gtagataact acgatacggg agggcttacc atctggcccc
agtgctgcaa tgataccgcg 6900agaaccacgc tcaccggctc cagatttatc agcaataaac
cagccagccg gaagggccga 6960gcgcagaagt ggtcctgcaa ctttatccgc ctccatccag
tctattaatt gttgccggga 7020agctagagta agtagttcgc cagttaatag tttgcgcaac
gttgttgcca ttgctacagg 7080catcgtggtg tcacgctcgt cgtttggtat ggcttcattc
agctccggtt cccaacgatc 7140aaggcgagtt acatgatccc ccatgttgtg caaaaaagcg
gttagctcct tcggtcctcc 7200gatcgttgtc agaagtaagt tggccgcagt gttatcactc
atggttatgg cagcactgca 7260taattctctt actgtcatgc catccgtaag atgcttttct
gtgactggtg agtactcaac 7320caagtcattc tgagaatagt gtatgcggcg accgagttgc
tcttgcccgg cgtcaatacg 7380ggataatacc gcgccacata gcagaacttt aaaagtgctc
atcattggaa aacgttcttc 7440ggggcgaaaa ctctcaagga tcttaccgct gttgagatcc
agttcgatgt aacccactcg 7500tgcacccaac tgatcttcag catcttttac tttcaccagc
gtttctgggt gagcaaaaac 7560aggaaggcaa aatgccgcaa aaaagggaat aagggcgaca
cggaaatgtt gaatactcat 7620actcttcctt tttcaatatt attgaagcat ttatcagggt
tattgtctca tgagcggata 7680catatttgaa tgtatttaga aaaataaaca aataggggtt
ccgcgcacat ttccccgaaa 7740agtgccacct gacgtctaag aaaccattat tatcatgaca
ttaacctata aaaataggcg 7800tatcacgagg ccctttcggg tcgcgcgttt cggtgatgac
ggtgaaaacc tctgacacat 7860gcagctcccg ttgacggtca cagcttgtct gtaagcggat
gccgggagca gacaagcccg 7920tcagggcgcg tcagcgggtg ttggcgggtg tcggggctgg
cttaactatg cggcatcaga 7980gcagattgta ctgagagtgc accataaaat tgtaaacgtt
aatattttgt taaaattcgc 8040gttaaatttt tgttaaatca gctcattttt taaccaatag
gccgaaatcg gcaaaatccc 8100ttataaatca aaagaatagc ccgagatagg gttgagtgtt
gttccagttt ggaacaagag 8160tccactatta aagaacgtgg actccaacgt caaagggcga
aaaaccgtct atcagggcga 8220tggcccacta cgtgaaccat cacccaaatc aagttttttg
gggtcgaggt gccgtaaagc 8280actaaatcgg aaccctaaag ggagcccccg atttagagct
tgacggggaa agccggcgaa 8340cgtggcgaga aaggaaggga agaaagcgaa aggagcgggc
gctagggcgc tggcaagtgt 8400agcggtcacg ctgcgcgtaa ccaccacacc cgccgcgctt
aatgcgccgc tacagggcgc 8460gtactatggt tgctttgacg tatgcggtgt gaaataccgc
acagatgcgt aaggagaaaa 8520taccgcatca ggcgccattc gccattcagg ctgcgcaact
gttgggaagg gcgatcggtg 8580cgggcctctt cgctattacg ccagctggcg aaagggggat
gtgctgcaag gcgattaagt 8640tgggtaacgc cagggttttc ccagtcacga cgttgtaaaa
cgacggccag tgaattccat 8700ggtctcaact ttc
8713304059DNAArtificial SequenceSynthetic VLP78_11
(CHI VLP 532 NPNAx25) CHIKV-NPNAx25 sequence 30atggagttca
tcccgacgca aactttctat aacagaaggt accaaccccg accctgggcc 60ccacgcccta
caattcaagt aattagacct agaccacgtc cacagaggca ggctgggcaa 120ctcgcccagc
tgatctccgc agtcaacaaa ttgaccatgc gcgcggtacc tcaacagaag 180cctcgcagaa
atcggaaaaa caagaagcaa aggcagaaga agcaggcgcc gcaaaacgac 240ccaaagcaaa
agaagcaacc accacaaaag aagccggctc aaaagaagaa gaaaccaggc 300cgtagggaga
gaatgtgcat gaaaattgaa aatgattgca tcttcgaagt caagcatgaa 360ggcaaagtga
tgggctacgc atgcctggtg ggggataaag taatgaaacc agcacatgtg 420aagggaacta
tcgacaatgc cgatctggct aaactggcct ttaagcggtc gtctaaatac 480gatcttgaat
gtgcacagat accggtgcac atgaagtctg atgcctcgaa gtttacccac 540gagaaacccg
aggggtacta taactggcat cacggagcag tgcagtattc aggaggccgg 600ttcactatcc
cgacgggtgc aggcaagccg ggagacagcg gcagaccgat cttcgacaac 660aaaggacggg
tggtggccat cgtcctagga ggggccaacg aaggtgcccg cacggccctc 720tccgtggtga
cgtggaacaa agacatcgtc acaaaaatta cccctgaggg agccgaagag 780tggagcctcg
ccctcccggt cttgtgcctg ttggcaaaca ctacattccc ctgctctcag 840ccgccttgca
caccctgctg ctacgaaaag gaaccggaaa gcaccttgcg catgcttgag 900gacaacgtga
tgagacccgg atactaccag ctactaaaag catcgctgac ttgctctccc 960caccgccaaa
gacgcagtac taaggacaat tttaatgtct ataaagccac aagaccatat 1020ctagctcatt
gtcctgactg cggagaaggg cattcgtgcc acagccctat cgcattggag 1080cgcatcagaa
atgaagcaac ggacggaacg ctgaaaatcc aggtctcttt gcagatcggg 1140ataaagacag
atgacagcca cgattggacc aagctgcgct atatggatag ccatacgcca 1200gcggacgcgg
agcgagccgg attgcttgta aggacttcag caccgtgcac gatcaccggg 1260accatgggac
actttattct cgcccgatgc ccgaaaggag agacgctgac agtgggattt 1320acggacagca
gaaagatcag ccacacatgc acacacccgt tccatcatga accacctgtg 1380ataggtaggg
agaggttcca ctctcgacca caacatggta aagagttacc ttgcagcacg 1440tacgtgcaga
gcaccgctgc cactgctgag gagatagagg tgcatatgcc cccagatact 1500cctgaccgca
cgctgatgac gcagcagtct ggcaacgtga agatcacagt taatgggcag 1560acggtgcggt
acaagtgcaa ctgcggtggc tccggaggaa acccgaatgc caatcccaac 1620gcgaacccca
acgctaaccc caacgccaat ccgaatgcaa acccgaacgt tgacccaaac 1680gccaacccga
atgccaatcc caacgcgaac cccaatgcta acccaaatgc caacccaaac 1740gccaacccca
acgctaatcc aaacgccaac cctaacgcca atcccaacgc gaatcctaac 1800gctaatccca
acgcaaatcc caatgctaat ccgaacgcga accctaatgc aaaccccaac 1860gccaacccga
acgctaaccc gaacgctaat cccaacgccg gtggatccaa cgagggactg 1920acaaccacag
acaaagtgat caataactgc aaaattgatc agtgccatgc tgcagtcact 1980aatcacaaga
attggcaata caactcccct ttagtcccgc gcaacgctga actcggggac 2040cgtaaaggaa
agatccacat cccattccca ttggcaaacg tgacttgcag agtgccaaaa 2100gcaagaaacc
ctacagtaac ttacggaaaa aaccaagtca ccatgctgct gtatcctgac 2160catccgacac
tcttgtctta ccgtaacatg ggacaggaac caaattacca cgaggagtgg 2220gtgacacaca
agaaggaggt taccttgacc gtgcctactg agggtctgga ggtcacttgg 2280ggcaacaacg
aaccatacaa gtactggccg cagatgtcta cgaacggtac tgctcatggt 2340cacccacatg
agataatctt gtactattat gagctgtacc ccactatgac tgtagtcatt 2400gtgtcggtgg
cctcgttcgt gcttctgtcg atggtgggca cagcagtggg aatgtgtgtg 2460tgcgcacggc
gcagatgcat tacaccatat gaattaacac caggagccac tgttcccttc 2520ctgctcagcc
tgctatgctg cgtcagaacg accaaggcgg ccacatatta cgaggctgcg 2580gcatatctat
ggaacgaaca gcagcccctg ttctggttgc aggctcttat cccgctggcc 2640gccttgatcg
tcctgtgcaa ctgtctgaaa ctcttgccat gctgctgtaa gaccctggct 2700tttttagccg
taatgagcat cggtgcccac actgtgagcg cgtacgaaca cgtaacagtg 2760atcccgaaca
cggtgggagt accgtataag actcttgtca acagaccggg ttacagcccc 2820atggtgttgg
agatggagct acaatcagtc accttggaac caacactgtc acttgactac 2880atcacgtgcg
agtacaaaac tgtcatcccc tccccgtacg tgaagtgctg tggtacagca 2940gagtgcaagg
acaagagcct accagactac agctgcaagg tctttactgg agtctaccca 3000tttatgtggg
gcggcgccta ctgcttttgc gacgccgaaa atacgcaatt gagcgaggca 3060catgtagaga
aatctgaatc ttgcaaaaca gagtttgcat cggcctacag agcccacacc 3120gcatcggcgt
cggcgaagct ccgcgtcctt taccaaggaa acaacattac cgtagctgcc 3180tacgctaacg
gtgaccatgc cgtcacagta aaggacgcca agtttgtcgt gggcccaatg 3240tcctccgcct
ggacaccttt tgacaacaaa atcgtggtgt acaaaggcga cgtctacaac 3300atggactacc
caccttttgg cgcaggaaga ccaggacaat ttggtgacat tcaaagtcgt 3360acaccggaaa
gtaaagacgt ttatgccaac actcagttgg tactacagag gccagcagca 3420ggcacggtac
atgtaccata ctctcaggca ccatctggct tcaagtattg gctgaaggaa 3480cgaggagcat
cgctacagca cacggcaccg ttcggttgcc agattgcgac aaacccggta 3540agagctgtaa
attgcgctgt ggggaacata ccaatttcca tcgacatacc ggatgcggcc 3600tttactaggg
ttgtcgatgc accctctgta acggacatgt catgcgaagt accagcctgc 3660actcactcct
ccgactttgg gggcgtcgcc atcatcaaat acacagctag caagaaaggt 3720aaatgtgcag
tacattcgat gaccaacgcc gttaccattc gagaagccga cgtagaagta 3780gaggggaact
cccagctgca aatatccttc tcaacagccc tggcaagcgc cgagtttcgc 3840gtgcaagtgt
gctccacaca agtacactgc gcagccgcat gccaccctcc aaaggaccac 3900atagtcaatt
acccagcatc acacaccacc cttggggtcc aggatatatc cacaacggca 3960atgtcttggg
tgcagaagat tacgggagga gtaggattaa ttgttgctgt tgctgcctta 4020attttaattg
tggtgctatg cgtgtcgttt agcaggcac
4059311353PRTArtificial SequenceSynthetic VLP78_11 (CHI VLP 532 NPNAx25)
sequence 31Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr
Gln Pro 1 5 10 15
Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro
20 25 30 Arg Pro Gln Arg Gln
Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val 35
40 45 Asn Lys Leu Thr Met Arg Ala Val Pro
Gln Gln Lys Pro Arg Arg Asn 50 55
60 Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln Ala Pro
Gln Asn Asp 65 70 75
80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys
85 90 95 Lys Lys Pro Gly
Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp 100
105 110 Cys Ile Phe Glu Val Lys His Glu Gly
Lys Val Met Gly Tyr Ala Cys 115 120
125 Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly
Thr Ile 130 135 140
Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr 145
150 155 160 Asp Leu Glu Cys Ala
Gln Ile Pro Val His Met Lys Ser Asp Ala Ser 165
170 175 Lys Phe Thr His Glu Lys Pro Glu Gly Tyr
Tyr Asn Trp His His Gly 180 185
190 Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly Ala
Gly 195 200 205 Lys
Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220 Val Ala Ile Val Leu Gly
Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225 230
235 240 Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr
Lys Ile Thr Pro Glu 245 250
255 Gly Ala Glu Glu Trp Ser Leu Ala Leu Pro Val Leu Cys Leu Leu Ala
260 265 270 Asn Thr
Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys Tyr 275
280 285 Glu Lys Glu Pro Glu Ser Thr
Leu Arg Met Leu Glu Asp Asn Val Met 290 295
300 Arg Pro Gly Tyr Tyr Gln Leu Leu Lys Ala Ser Leu
Thr Cys Ser Pro 305 310 315
320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala
325 330 335 Thr Arg Pro
Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser 340
345 350 Cys His Ser Pro Ile Ala Leu Glu
Arg Ile Arg Asn Glu Ala Thr Asp 355 360
365 Gly Thr Leu Lys Ile Gln Val Ser Leu Gln Ile Gly Ile
Lys Thr Asp 370 375 380
Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro 385
390 395 400 Ala Asp Ala Glu
Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys 405
410 415 Thr Ile Thr Gly Thr Met Gly His Phe
Ile Leu Ala Arg Cys Pro Lys 420 425
430 Gly Glu Thr Leu Thr Val Gly Phe Thr Asp Ser Arg Lys Ile
Ser His 435 440 445
Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile Gly Arg Glu 450
455 460 Arg Phe His Ser Arg
Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465 470
475 480 Tyr Val Gln Ser Thr Ala Ala Thr Ala Glu
Glu Ile Glu Val His Met 485 490
495 Pro Pro Asp Thr Pro Asp Arg Thr Leu Met Thr Gln Gln Ser Gly
Asn 500 505 510 Val
Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys Asn Cys 515
520 525 Gly Gly Ser Gly Gly Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530 535
540 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro
Asn Val Asp Pro Asn 545 550 555
560 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
565 570 575 Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 580
585 590 Ala Asn Pro Asn Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn 595 600
605 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 610 615 620
Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser Asn Glu Gly Leu 625
630 635 640 Thr Thr Thr
Asp Lys Val Ile Asn Asn Cys Lys Ile Asp Gln Cys His 645
650 655 Ala Ala Val Thr Asn His Lys Asn
Trp Gln Tyr Asn Ser Pro Leu Val 660 665
670 Pro Arg Asn Ala Glu Leu Gly Asp Arg Lys Gly Lys Ile
His Ile Pro 675 680 685
Phe Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys Ala Arg Asn Pro 690
695 700 Thr Val Thr Tyr
Gly Lys Asn Gln Val Thr Met Leu Leu Tyr Pro Asp 705 710
715 720 His Pro Thr Leu Leu Ser Tyr Arg Asn
Met Gly Gln Glu Pro Asn Tyr 725 730
735 His Glu Glu Trp Val Thr His Lys Lys Glu Val Thr Leu Thr
Val Pro 740 745 750
Thr Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu Pro Tyr Lys Tyr
755 760 765 Trp Pro Gln Met
Ser Thr Asn Gly Thr Ala His Gly His Pro His Glu 770
775 780 Ile Ile Leu Tyr Tyr Tyr Glu Leu
Tyr Pro Thr Met Thr Val Val Ile 785 790
795 800 Val Ser Val Ala Ser Phe Val Leu Leu Ser Met Val
Gly Thr Ala Val 805 810
815 Gly Met Cys Val Cys Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu
820 825 830 Thr Pro Gly
Ala Thr Val Pro Phe Leu Leu Ser Leu Leu Cys Cys Val 835
840 845 Arg Thr Thr Lys Ala Ala Thr Tyr
Tyr Glu Ala Ala Ala Tyr Leu Trp 850 855
860 Asn Glu Gln Gln Pro Leu Phe Trp Leu Gln Ala Leu Ile
Pro Leu Ala 865 870 875
880 Ala Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu Pro Cys Cys Cys
885 890 895 Lys Thr Leu Ala
Phe Leu Ala Val Met Ser Ile Gly Ala His Thr Val 900
905 910 Ser Ala Tyr Glu His Val Thr Val Ile
Pro Asn Thr Val Gly Val Pro 915 920
925 Tyr Lys Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro Met Val
Leu Glu 930 935 940
Met Glu Leu Gln Ser Val Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr 945
950 955 960 Ile Thr Cys Glu Tyr
Lys Thr Val Ile Pro Ser Pro Tyr Val Lys Cys 965
970 975 Cys Gly Thr Ala Glu Cys Lys Asp Lys Ser
Leu Pro Asp Tyr Ser Cys 980 985
990 Lys Val Phe Thr Gly Val Tyr Pro Phe Met Trp Gly Gly Ala
Tyr Cys 995 1000 1005
Phe Cys Asp Ala Glu Asn Thr Gln Leu Ser Glu Ala His Val Glu 1010
1015 1020 Lys Ser Glu Ser Cys
Lys Thr Glu Phe Ala Ser Ala Tyr Arg Ala 1025 1030
1035 His Thr Ala Ser Ala Ser Ala Lys Leu Arg
Val Leu Tyr Gln Gly 1040 1045 1050
Asn Asn Ile Thr Val Ala Ala Tyr Ala Asn Gly Asp His Ala Val
1055 1060 1065 Thr Val
Lys Asp Ala Lys Phe Val Val Gly Pro Met Ser Ser Ala 1070
1075 1080 Trp Thr Pro Phe Asp Asn Lys
Ile Val Val Tyr Lys Gly Asp Val 1085 1090
1095 Tyr Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg
Pro Gly Gln 1100 1105 1110
Phe Gly Asp Ile Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr 1115
1120 1125 Ala Asn Thr Gln Leu
Val Leu Gln Arg Pro Ala Ala Gly Thr Val 1130 1135
1140 His Val Pro Tyr Ser Gln Ala Pro Ser Gly
Phe Lys Tyr Trp Leu 1145 1150 1155
Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe Gly Cys
1160 1165 1170 Gln Ile
Ala Thr Asn Pro Val Arg Ala Val Asn Cys Ala Val Gly 1175
1180 1185 Asn Ile Pro Ile Ser Ile Asp
Ile Pro Asp Ala Ala Phe Thr Arg 1190 1195
1200 Val Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys
Glu Val Pro 1205 1210 1215
Ala Cys Thr His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys 1220
1225 1230 Tyr Thr Ala Ser Lys
Lys Gly Lys Cys Ala Val His Ser Met Thr 1235 1240
1245 Asn Ala Val Thr Ile Arg Glu Ala Asp Val
Glu Val Glu Gly Asn 1250 1255 1260
Ser Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu
1265 1270 1275 Phe Arg
Val Gln Val Cys Ser Thr Gln Val His Cys Ala Ala Ala 1280
1285 1290 Cys His Pro Pro Lys Asp His
Ile Val Asn Tyr Pro Ala Ser His 1295 1300
1305 Thr Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala
Met Ser Trp 1310 1315 1320
Val Gln Lys Ile Thr Gly Gly Val Gly Leu Ile Val Ala Val Ala 1325
1330 1335 Ala Leu Ile Leu Ile
Val Val Leu Cys Val Ser Phe Ser Arg His 1340 1345
1350 328737DNAArtificial SequenceSynthetic
VLP78_21 (VEEV VLP 519 NPNAx25) sequence 32gaattcccat tgcatacgtt
gtatccatat cataatatgt acatttatat tggctcatgt 60ccaacattac cgccatgttg
acattgatta ttgactagtt attaatagta atcaattacg 120gggtcattag ttcatagccc
atatatggag ttccgcgtta cataacttac ggtaaatggc 180ccgcctggct gaccgcccaa
cgacccccgc ccattgacgt caataatgac gtatgttccc 240atagtaacgc caatagggac
tttccattga cgtcaatggg tggagtattt acggtaaact 300gcccacttgg cagtacatca
agtgtatcat atgccaagta cgccccctat tgacgtcaat 360gacggtaaat ggcccgcctg
gcattatgcc cagtacatga ccttatggga ctttcctact 420tggcagtaca tctacgtatt
agtcatcgct attaccatgg tgatgcggtt ttggcagtac 480atcaatgggc gtggatagcg
gtttgactca cggggatttc caagtctcca ccccattgac 540gtcaatggga gtttgttttg
gcaccaaaat caacgggact ttccaaaatg tcgtaacaac 600tccgccccat tgacgcaaat
gggcggtagg cgtgtacggt gggaggtcta tataagcaga 660gctcgtttag tgaaccgtca
gatcgcctgg agacgccatc cacgctgttt tgacctccat 720agaagacacc gggaccgatc
cagcctccgt taacggtgga gggcagtgta gtctgagcag 780tactcgttgc tgccgcgcgc
gccaccagac ataatagctg acagactaac agactgttcc 840tttccatggg tcttttctgc
agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg 900ccaccatgtt cccgttccag
ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt 960tcgcggcccc gcgcaggccc
tggttcccca gaaccgaccc ttttctggcg atgcaggtgc 1020aggaattaac ccgctcgatg
gctaacctga cgttcaagca acgccgggac gcgccacctg 1080aggggccatc cgctaataaa
ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc 1140aagggaagaa gaagaagaac
caagggaaga agaaggctaa gacagggccg cctaatccga 1200aggcacagaa tggaaacaag
aagaagacca acaagaaacc aggcaagaga cagcgcatgg 1260tcatgaaatt ggaatctgac
aagacgttcc caatcatgtt ggaagggaag ataaacggct 1320acgcttgtgt ggtcggaggg
aagttattca ggccgatgca tgtggaaggc aagatcgaca 1380acgacgttct ggccgcgctt
aagacgaaga aagcatccaa atacgatctt gagtatgcag 1440atgtgccaca gaacatgcgg
gccgatacat tcaaatacac ccatgagaaa ccccaaggct 1500attacagctg gcatcatgga
gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag 1560gagttggggc caagggagac
agcggacgac ccattctgga taaccaggga cgggtggtcg 1620ctattgtgct gggaggtgtg
aatgaaggat ctaggacagc cctttcagtc gtcatgtgga 1680acgagaaggg agttaccgtg
aagtatactc cagagaactg cgagcaatgg tcactagtga 1740ccaccatgtg tctgctcgcc
aatgtgacgt tcccatgtgc tcaaccacca atttgctacg 1800acagaaaacc agcagagact
ttggccatgc tcagcgttaa cgttgacaac ccgggctacg 1860atgagctgct ggaagcagct
gttaagtgcc ccggaaggaa aaggagatcc accgaggagc 1920tgtttaatga gtataagcta
acgcgccctt acatggccag atgcatcaga tgtgcagttg 1980ggagctgcca tagtccaata
gcaatcgagg cagtaaagag cgacgggcac gacggttatg 2040ttagacttca gacttcctcg
cagtatggcc tggattcctc cggcaactta aagggcagga 2100ccatgcggta tgacatgcac
gggaccatta aagagatacc actacatcaa gtgtcactct 2160atacatctcg cccgtgtcac
attgtggatg ggcacggtta tttcctgctt gccaggtgcc 2220cggcagggga ctccatcacc
atggaattta agaaagattc cgtcagacac tcctgctcgg 2280tgccgtatga agtgaaattt
aatcctgtag gcagagaact ctatactcat cccccagaac 2340acggagtaga gcaagcgtgc
caagtctacg cacatgatgc acagaacaga ggagcttatg 2400tcgagatgca cctcccgggc
tcagaagtgg acagcagttt ggtttccttg agcggcagtt 2460ccggaggaaa cccgaatgcc
aatcccaacg cgaaccccaa cgctaacccc aacgccaatc 2520cgaatgcaaa cccgaacgtt
gacccaaacg ccaacccgaa tgccaatccc aacgcgaacc 2580ccaatgctaa cccaaatgcc
aacccaaacg ccaaccccaa cgctaatcca aacgccaacc 2640ctaacgccaa tcccaacgcg
aatcctaacg ctaatcccaa cgcaaatccc aatgctaatc 2700cgaacgcgaa ccctaatgca
aaccccaacg ccaacccgaa cgctaacccg aacgctaatc 2760ccaacgccgg tggatcctca
gtcaccgtga cacctcctga tgggactagc gccctggtgg 2820aatgcgagtg tggcggcaca
aagatctccg agaccatcaa caagacaaaa cagttcagcc 2880agtgcacaaa gaaggagcag
tgcagagcat atcggctgca gaacgataag tgggtgtata 2940attctgacaa actgcccaaa
gcagcgggag ccaccttaaa aggaaaactg catgtcccat 3000tcttgctggc agacggcaaa
tgcaccgtgc ctctagcacc agaacctatg ataaccttcg 3060gtttcagatc agtgtcactg
aaactgcacc ctaagaatcc cacatatcta atcacccgcc 3120aacttgctga tgagcctcac
tacacgcacg agctcatatc tgaaccagct gttaggaatt 3180ttaccgtcac cgaaaaaggg
tgggagtttg tatggggaaa ccacccgccg aaaaggtttt 3240gggcacagga aacagcaccc
ggaaatccac atgggctacc gcacgaggtg ataactcatt 3300attaccacag ataccctatg
tccaccatcc tgggtttgtc aatttgtgcc gccattgcaa 3360ccgtttccgt tgcagcgtct
acctggctgt tttgcagatc aagagttgcg tgcctaactc 3420cttaccggct aacacctaac
gctaggatac cattttgtct ggctgtgctt tgctgcgccc 3480gcactgcccg ggccgagacc
acctgggagt ccttggatca cctatggaac aataaccaac 3540agatgttctg gattcaattg
ctgatccctc tggccgcctt gatcgtagtg actcgcctgc 3600tcaggtgcgt gtgctgtgtc
gtgccttttt tagtcatggc cggcgccgca ggcgccggcg 3660cctacgagca cgcgaccacg
atgccgagcc aagcgggaat ctcgtataac actatagtca 3720acagagcagg ctacgcacca
ctccctatca gcataacacc aacaaagatc aagctgatac 3780ctacagtgaa cttggagtac
gtcacctgcc actacaaaac aggaatggat tcaccagcca 3840tcaaatgctg cggatctcag
gaatgcactc caacttacag gcctgatgaa cagtgcaaag 3900tcttcacagg ggtttacccg
ttcatgtggg gtggtgcata ttgcttttgc gacactgaga 3960acacccaagt cagcaaggcc
tacgtaatga aatctgacga ctgccttgcg gatcatgctg 4020aagcatataa agcgcacaca
gcctcagtgc aggcgttcct caacatcaca gtgggagaac 4080actctattgt gactaccgtg
tatgtgaatg gagaaactcc tgtgaatttc aatggggtca 4140aaataactgc aggtccgctt
tccacagctt ggacaccctt tgatcgcaaa atcgtgcagt 4200atgccgggga gatctataat
tatgattttc ctgagtatgg ggcaggacaa ccaggagcat 4260ttggagatat acaatccaga
acagtctcaa gctctgatct gtatgccaat accaacctag 4320tgctgcagag acccaaagca
ggagcgatcc acgtgccata cactcaggca ccttcgggtt 4380ttgagcaatg gaagaaagat
aaagctccat cattgaaatt taccgcccct ttcggatgcg 4440aaatatatac aaaccccatt
cgcgccgaaa actgtgctgt agggtcaatt ccattagcct 4500ttgacattcc cgacgccttg
ttcaccaggg tgtcagaaac accgacactt tcagcggccg 4560aatgcactct taacgagtgc
gtgtattctt ccgactttgg tgggatcgcc acggtcaagt 4620actcggccag caagtcaggc
aagtgcgcag tccatgtgcc atcagggact gctaccctaa 4680aagaagcagc agtcgagcta
accgagcaag ggtcggcgac tatccatttc tcgaccgcaa 4740atatccaccc ggagttcagg
ctccaaatat gcacatcata tgttacgtgc aaaggtgatt 4800gtcacccccc gaaagaccat
attgtgacac accctcagta tcacgcccaa acatttacag 4860ccgcggtgtc aaaaaccgcg
tggacgtggt taacatccct gctgggagga tcagccgtaa 4920ttattataat tggcttggtg
ctggctacta ttgtggccat gtacgtgctg accaaccaga 4980aacataatta aggatctaga
tctgctgtgc cttctagttg ccagccatct gttgtttgcc 5040cctcccccgt gccttccttg
accctggaag gtgccactcc cactgtcctt tcctaataaa 5100atgaggaaat tgcatcgcat
tgtctgagta ggtgtcattc tattctgggg ggtggggtgg 5160ggcaggacag caagggggag
gattgggaag acaatagcag gcatgctggg gatgcggtgg 5220gctctatggg tacccaggtg
ctgaagaatt gacccggttc ctcctgggcc agaaagaagc 5280aggcacatcc ccttctctgt
gacacaccct gtccacgccc ctggttctta gttccagccc 5340cactcatagg acactcatag
ctcaggaggg ctccgccttc aatcccaccc gctaaagtac 5400ttggagcggt ctctccctcc
ctcatcagcc caccaaacca aacctagcct ccaagagtgg 5460gaagaaatta aagcaagata
ggctattaag tgcagaggga gagaaaatgc ctccaacatg 5520tgaggaagta atgagagaaa
tcatagaatt ttaaggccat gatttaaggc catcatggcc 5580taagcttgaa aggagatagg
atcaaagctt ggcgtaatca tggtcatagc tgtttcctgt 5640gtgaaattgt tatccgctca
caattccaca caacatacga gccggaagca taaagtgtaa 5700agcctggggt gcctaatgag
tgagctaact cacattaatt gcgttgcgct cactgcccgc 5760tttccagtcg ggaaacctgt
cgtgccagct gcattaatga atcggccaac gcgcggggag 5820aggcggtttg cgtattgggc
gctcttccgc ttcctcgctc actgactcgc tgcgctcggt 5880cgttcggctg cggcgagcgg
tatcagctca ctcaaaggcg gtaatacggt tatccacaga 5940atcaggggat aacgcaggaa
agaacatgtg agcaaaaggc cagcaaaagg ccaggaaccg 6000taaaaaggcc gcgttgctgg
cgtttttcca taggctccgc ccccctgacg agcatcacaa 6060aaatcgacgc tcaagtcaga
ggtggcgaaa cccgacagga ctataaagat accaggcgtt 6120tccccctgga agctccctcg
tgcgctctcc tgttccgacc ctgccgctta ccggatacct 6180gtccgccttt ctcccttcgg
gaagcgtggc gctttctcat agctcacgct gtaggtatct 6240cagttcggtg taggtcgttc
gctccaagct gggctgtgtg cacgaacccc ccgttcagcc 6300cgaccgctgc gccttatccg
gtaactatcg tcttgagtcc aacccggtaa gacacgactt 6360atcgccactg gcagcagcca
ctggtaacag gattagcaga gcgaggtatg taggcggtgc 6420tacagagttc ttgaagtggt
ggcctaacta cggctacact agaagaacag tatttggtat 6480ctgcgctctg ctgaagccag
ttaccttcgg aaaaagagtt ggtagctctt gatccggcaa 6540acaaaccacc gctggtagcg
gtggtttttt tgtttgcaag cagcagatta cgcgcagaaa 6600aaaaggatct caagaagatc
ctttgatctt ttctacgggg tctgacgctc agtggaacga 6660aaactcacgt taagggattt
tggtcatgag attatcaaaa aggatcttca cctagatcct 6720tttaaattaa aaatgaagtt
ttaaatcaat ctaaagtata tatgagtaaa cttggtctga 6780cagttaccaa tgcttaatca
gtgaggcacc tatctcagcg atctgtctat ttcgttcatc 6840catagttgcc tgactccccg
tcgtgtagat aactacgata cgggagggct taccatctgg 6900ccccagtgct gcaatgatac
cgcgagaacc acgctcaccg gctccagatt tatcagcaat 6960aaaccagcca gccggaaggg
ccgagcgcag aagtggtcct gcaactttat ccgcctccat 7020ccagtctatt aattgttgcc
gggaagctag agtaagtagt tcgccagtta atagtttgcg 7080caacgttgtt gccattgcta
caggcatcgt ggtgtcacgc tcgtcgtttg gtatggcttc 7140attcagctcc ggttcccaac
gatcaaggcg agttacatga tcccccatgt tgtgcaaaaa 7200agcggttagc tccttcggtc
ctccgatcgt tgtcagaagt aagttggccg cagtgttatc 7260actcatggtt atggcagcac
tgcataattc tcttactgtc atgccatccg taagatgctt 7320ttctgtgact ggtgagtact
caaccaagtc attctgagaa tagtgtatgc ggcgaccgag 7380ttgctcttgc ccggcgtcaa
tacgggataa taccgcgcca catagcagaa ctttaaaagt 7440gctcatcatt ggaaaacgtt
cttcggggcg aaaactctca aggatcttac cgctgttgag 7500atccagttcg atgtaaccca
ctcgtgcacc caactgatct tcagcatctt ttactttcac 7560cagcgtttct gggtgagcaa
aaacaggaag gcaaaatgcc gcaaaaaagg gaataagggc 7620gacacggaaa tgttgaatac
tcatactctt cctttttcaa tattattgaa gcatttatca 7680gggttattgt ctcatgagcg
gatacatatt tgaatgtatt tagaaaaata aacaaatagg 7740ggttccgcgc acatttcccc
gaaaagtgcc acctgacgtc taagaaacca ttattatcat 7800gacattaacc tataaaaata
ggcgtatcac gaggcccttt cgggtcgcgc gtttcggtga 7860tgacggtgaa aacctctgac
acatgcagct cccgttgacg gtcacagctt gtctgtaagc 7920ggatgccggg agcagacaag
cccgtcaggg cgcgtcagcg ggtgttggcg ggtgtcgggg 7980ctggcttaac tatgcggcat
cagagcagat tgtactgaga gtgcaccata aaattgtaaa 8040cgttaatatt ttgttaaaat
tcgcgttaaa tttttgttaa atcagctcat tttttaacca 8100ataggccgaa atcggcaaaa
tcccttataa atcaaaagaa tagcccgaga tagggttgag 8160tgttgttcca gtttggaaca
agagtccact attaaagaac gtggactcca acgtcaaagg 8220gcgaaaaacc gtctatcagg
gcgatggccc actacgtgaa ccatcaccca aatcaagttt 8280tttggggtcg aggtgccgta
aagcactaaa tcggaaccct aaagggagcc cccgatttag 8340agcttgacgg ggaaagccgg
cgaacgtggc gagaaaggaa gggaagaaag cgaaaggagc 8400gggcgctagg gcgctggcaa
gtgtagcggt cacgctgcgc gtaaccacca cacccgccgc 8460gcttaatgcg ccgctacagg
gcgcgtacta tggttgcttt gacgtatgcg gtgtgaaata 8520ccgcacagat gcgtaaggag
aaaataccgc atcaggcgcc attcgccatt caggctgcgc 8580aactgttggg aagggcgatc
ggtgcgggcc tcttcgctat tacgccagct ggcgaaaggg 8640ggatgtgctg caaggcgatt
aagttgggta acgccagggt tttcccagtc acgacgttgt 8700aaaacgacgg ccagtgaatt
ccatggtctc aactttc 8737334086DNAArtificial
SequenceSynthetic VLP78_21 (VEEV VLP 519 NPNAx25) VEEV-NPNAx25
sequence 33atgttcccgt tccagccaat gtatccgatg cagccaatgc cctatcgcaa
cccgttcgcg 60gccccgcgca ggccctggtt ccccagaacc gacccttttc tggcgatgca
ggtgcaggaa 120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc gggacgcgcc
acctgagggg 180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac agaaaggggg
aggccaaggg 240aagaagaaga agaaccaagg gaagaagaag gctaagacag ggccgcctaa
tccgaaggca 300cagaatggaa acaagaagaa gaccaacaag aaaccaggca agagacagcg
catggtcatg 360aaattggaat ctgacaagac gttcccaatc atgttggaag ggaagataaa
cggctacgct 420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg aaggcaagat
cgacaacgac 480gttctggccg cgcttaagac gaagaaagca tccaaatacg atcttgagta
tgcagatgtg 540ccacagaaca tgcgggccga tacattcaaa tacacccatg agaaacccca
aggctattac 600agctggcatc atggagcagt ccaatatgaa aatgggcgtt tcacggtgcc
gaaaggagtt 660ggggccaagg gagacagcgg acgacccatt ctggataacc agggacgggt
ggtcgctatt 720gtgctgggag gtgtgaatga aggatctagg acagcccttt cagtcgtcat
gtggaacgag 780aagggagtta ccgtgaagta tactccagag aactgcgagc aatggtcact
agtgaccacc 840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac caccaatttg
ctacgacaga 900aaaccagcag agactttggc catgctcagc gttaacgttg acaacccggg
ctacgatgag 960ctgctggaag cagctgttaa gtgccccgga aggaaaagga gatccaccga
ggagctgttt 1020aatgagtata agctaacgcg cccttacatg gccagatgca tcagatgtgc
agttgggagc 1080tgccatagtc caatagcaat cgaggcagta aagagcgacg ggcacgacgg
ttatgttaga 1140cttcagactt cctcgcagta tggcctggat tcctccggca acttaaaggg
caggaccatg 1200cggtatgaca tgcacgggac cattaaagag ataccactac atcaagtgtc
actctataca 1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc tgcttgccag
gtgcccggca 1320ggggactcca tcaccatgga atttaagaaa gattccgtca gacactcctg
ctcggtgccg 1380tatgaagtga aatttaatcc tgtaggcaga gaactctata ctcatccccc
agaacacgga 1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga acagaggagc
ttatgtcgag 1500atgcacctcc cgggctcaga agtggacagc agtttggttt ccttgagcgg
cagttccgga 1560ggaaacccga atgccaatcc caacgcgaac cccaacgcta accccaacgc
caatccgaat 1620gcaaacccga acgttgaccc aaacgccaac ccgaatgcca atcccaacgc
gaaccccaat 1680gctaacccaa atgccaaccc aaacgccaac cccaacgcta atccaaacgc
caaccctaac 1740gccaatccca acgcgaatcc taacgctaat cccaacgcaa atcccaatgc
taatccgaac 1800gcgaacccta atgcaaaccc caacgccaac ccgaacgcta acccgaacgc
taatcccaac 1860gccggtggat cctcagtcac cgtgacacct cctgatggga ctagcgccct
ggtggaatgc 1920gagtgtggcg gcacaaagat ctccgagacc atcaacaaga caaaacagtt
cagccagtgc 1980acaaagaagg agcagtgcag agcatatcgg ctgcagaacg ataagtgggt
gtataattct 2040gacaaactgc ccaaagcagc gggagccacc ttaaaaggaa aactgcatgt
cccattcttg 2100ctggcagacg gcaaatgcac cgtgcctcta gcaccagaac ctatgataac
cttcggtttc 2160agatcagtgt cactgaaact gcaccctaag aatcccacat atctaatcac
ccgccaactt 2220gctgatgagc ctcactacac gcacgagctc atatctgaac cagctgttag
gaattttacc 2280gtcaccgaaa aagggtggga gtttgtatgg ggaaaccacc cgccgaaaag
gttttgggca 2340caggaaacag cacccggaaa tccacatggg ctaccgcacg aggtgataac
tcattattac 2400cacagatacc ctatgtccac catcctgggt ttgtcaattt gtgccgccat
tgcaaccgtt 2460tccgttgcag cgtctacctg gctgttttgc agatcaagag ttgcgtgcct
aactccttac 2520cggctaacac ctaacgctag gataccattt tgtctggctg tgctttgctg
cgcccgcact 2580gcccgggccg agaccacctg ggagtccttg gatcacctat ggaacaataa
ccaacagatg 2640ttctggattc aattgctgat ccctctggcc gccttgatcg tagtgactcg
cctgctcagg 2700tgcgtgtgct gtgtcgtgcc ttttttagtc atggccggcg ccgcaggcgc
cggcgcctac 2760gagcacgcga ccacgatgcc gagccaagcg ggaatctcgt ataacactat
agtcaacaga 2820gcaggctacg caccactccc tatcagcata acaccaacaa agatcaagct
gatacctaca 2880gtgaacttgg agtacgtcac ctgccactac aaaacaggaa tggattcacc
agccatcaaa 2940tgctgcggat ctcaggaatg cactccaact tacaggcctg atgaacagtg
caaagtcttc 3000acaggggttt acccgttcat gtggggtggt gcatattgct tttgcgacac
tgagaacacc 3060caagtcagca aggcctacgt aatgaaatct gacgactgcc ttgcggatca
tgctgaagca 3120tataaagcgc acacagcctc agtgcaggcg ttcctcaaca tcacagtggg
agaacactct 3180attgtgacta ccgtgtatgt gaatggagaa actcctgtga atttcaatgg
ggtcaaaata 3240actgcaggtc cgctttccac agcttggaca ccctttgatc gcaaaatcgt
gcagtatgcc 3300ggggagatct ataattatga ttttcctgag tatggggcag gacaaccagg
agcatttgga 3360gatatacaat ccagaacagt ctcaagctct gatctgtatg ccaataccaa
cctagtgctg 3420cagagaccca aagcaggagc gatccacgtg ccatacactc aggcaccttc
gggttttgag 3480caatggaaga aagataaagc tccatcattg aaatttaccg cccctttcgg
atgcgaaata 3540tatacaaacc ccattcgcgc cgaaaactgt gctgtagggt caattccatt
agcctttgac 3600attcccgacg ccttgttcac cagggtgtca gaaacaccga cactttcagc
ggccgaatgc 3660actcttaacg agtgcgtgta ttcttccgac tttggtggga tcgccacggt
caagtactcg 3720gccagcaagt caggcaagtg cgcagtccat gtgccatcag ggactgctac
cctaaaagaa 3780gcagcagtcg agctaaccga gcaagggtcg gcgactatcc atttctcgac
cgcaaatatc 3840cacccggagt tcaggctcca aatatgcaca tcatatgtta cgtgcaaagg
tgattgtcac 3900cccccgaaag accatattgt gacacaccct cagtatcacg cccaaacatt
tacagccgcg 3960gtgtcaaaaa ccgcgtggac gtggttaaca tccctgctgg gaggatcagc
cgtaattatt 4020ataattggct tggtgctggc tactattgtg gccatgtacg tgctgaccaa
ccagaaacat 4080aattaa
4086341361PRTArtificial SequenceSynthetic VLP78_21 (VEEV VLP
519 NPNAx25) sequence 34Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln
Pro Met Pro Tyr Arg 1 5 10
15 Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro
20 25 30 Phe Leu
Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn Leu 35
40 45 Thr Phe Lys Gln Arg Arg Asp
Ala Pro Pro Glu Gly Pro Ser Ala Asn 50 55
60 Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly
Gly Gly Gln Gly 65 70 75
80 Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro
85 90 95 Asn Pro Lys
Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110 Gly Lys Arg Gln Arg Met Val Met
Lys Leu Glu Ser Asp Lys Thr Phe 115 120
125 Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys
Val Val Gly 130 135 140
Gly Lys Leu Phe Arg Pro Met His Val Glu Gly Lys Ile Asp Asn Asp 145
150 155 160 Val Leu Ala Ala
Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu 165
170 175 Tyr Ala Asp Val Pro Gln Asn Met Arg
Ala Asp Thr Phe Lys Tyr Thr 180 185
190 His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala
Val Gln 195 200 205
Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220 Asp Ser Gly Arg Pro
Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile 225 230
235 240 Val Leu Gly Gly Val Asn Glu Gly Ser Arg
Thr Ala Leu Ser Val Val 245 250
255 Met Trp Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn
Cys 260 265 270 Glu
Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala Asn Val Thr 275
280 285 Phe Pro Cys Ala Gln Pro
Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290 295
300 Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn
Pro Gly Tyr Asp Glu 305 310 315
320 Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr
325 330 335 Glu Glu
Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg 340
345 350 Cys Ile Arg Cys Ala Val Gly
Ser Cys His Ser Pro Ile Ala Ile Glu 355 360
365 Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg
Leu Gln Thr Ser 370 375 380
Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met 385
390 395 400 Arg Tyr Asp
Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val 405
410 415 Ser Leu Tyr Thr Ser Arg Pro Cys
His Ile Val Asp Gly His Gly Tyr 420 425
430 Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr
Met Glu Phe 435 440 445
Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460 Phe Asn Pro Val
Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly 465 470
475 480 Val Glu Gln Ala Cys Gln Val Tyr Ala
His Asp Ala Gln Asn Arg Gly 485 490
495 Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val Asp Ser
Ser Leu 500 505 510
Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn
515 520 525 Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540 Val Asp Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn 545 550
555 560 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 565 570
575 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
580 585 590 Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 595
600 605 Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Gly Gly Ser 610 615
620 Ser Val Thr Val Thr Pro Pro Asp Gly Thr Ser Ala Leu
Val Glu Cys 625 630 635
640 Glu Cys Gly Gly Thr Lys Ile Ser Glu Thr Ile Asn Lys Thr Lys Gln
645 650 655 Phe Ser Gln Cys
Thr Lys Lys Glu Gln Cys Arg Ala Tyr Arg Leu Gln 660
665 670 Asn Asp Lys Trp Val Tyr Asn Ser Asp
Lys Leu Pro Lys Ala Ala Gly 675 680
685 Ala Thr Leu Lys Gly Lys Leu His Val Pro Phe Leu Leu Ala
Asp Gly 690 695 700
Lys Cys Thr Val Pro Leu Ala Pro Glu Pro Met Ile Thr Phe Gly Phe 705
710 715 720 Arg Ser Val Ser Leu
Lys Leu His Pro Lys Asn Pro Thr Tyr Leu Ile 725
730 735 Thr Arg Gln Leu Ala Asp Glu Pro His Tyr
Thr His Glu Leu Ile Ser 740 745
750 Glu Pro Ala Val Arg Asn Phe Thr Val Thr Glu Lys Gly Trp Glu
Phe 755 760 765 Val
Trp Gly Asn His Pro Pro Lys Arg Phe Trp Ala Gln Glu Thr Ala 770
775 780 Pro Gly Asn Pro His Gly
Leu Pro His Glu Val Ile Thr His Tyr Tyr 785 790
795 800 His Arg Tyr Pro Met Ser Thr Ile Leu Gly Leu
Ser Ile Cys Ala Ala 805 810
815 Ile Ala Thr Val Ser Val Ala Ala Ser Thr Trp Leu Phe Cys Arg Ser
820 825 830 Arg Val
Ala Cys Leu Thr Pro Tyr Arg Leu Thr Pro Asn Ala Arg Ile 835
840 845 Pro Phe Cys Leu Ala Val Leu
Cys Cys Ala Arg Thr Ala Arg Ala Glu 850 855
860 Thr Thr Trp Glu Ser Leu Asp His Leu Trp Asn Asn
Asn Gln Gln Met 865 870 875
880 Phe Trp Ile Gln Leu Leu Ile Pro Leu Ala Ala Leu Ile Val Val Thr
885 890 895 Arg Leu Leu
Arg Cys Val Cys Cys Val Val Pro Phe Leu Val Met Ala 900
905 910 Gly Ala Ala Gly Ala Gly Ala Tyr
Glu His Ala Thr Thr Met Pro Ser 915 920
925 Gln Ala Gly Ile Ser Tyr Asn Thr Ile Val Asn Arg Ala
Gly Tyr Ala 930 935 940
Pro Leu Pro Ile Ser Ile Thr Pro Thr Lys Ile Lys Leu Ile Pro Thr 945
950 955 960 Val Asn Leu Glu
Tyr Val Thr Cys His Tyr Lys Thr Gly Met Asp Ser 965
970 975 Pro Ala Ile Lys Cys Cys Gly Ser Gln
Glu Cys Thr Pro Thr Tyr Arg 980 985
990 Pro Asp Glu Gln Cys Lys Val Phe Thr Gly Val Tyr Pro
Phe Met Trp 995 1000 1005
Gly Gly Ala Tyr Cys Phe Cys Asp Thr Glu Asn Thr Gln Val Ser
1010 1015 1020 Lys Ala Tyr
Val Met Lys Ser Asp Asp Cys Leu Ala Asp His Ala 1025
1030 1035 Glu Ala Tyr Lys Ala His Thr Ala
Ser Val Gln Ala Phe Leu Asn 1040 1045
1050 Ile Thr Val Gly Glu His Ser Ile Val Thr Thr Val Tyr
Val Asn 1055 1060 1065
Gly Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr Ala Gly 1070
1075 1080 Pro Leu Ser Thr Ala
Trp Thr Pro Phe Asp Arg Lys Ile Val Gln 1085 1090
1095 Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp Phe
Pro Glu Tyr Gly Ala 1100 1105 1110
Gly Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg Thr Val Ser
1115 1120 1125 Ser Ser
Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg Pro 1130
1135 1140 Lys Ala Gly Ala Ile His Val
Pro Tyr Thr Gln Ala Pro Ser Gly 1145 1150
1155 Phe Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu
Lys Phe Thr 1160 1165 1170
Ala Pro Phe Gly Cys Glu Ile Tyr Thr Asn Pro Ile Arg Ala Glu 1175
1180 1185 Asn Cys Ala Val Gly
Ser Ile Pro Leu Ala Phe Asp Ile Pro Asp 1190 1195
1200 Ala Leu Phe Thr Arg Val Ser Glu Thr Pro
Thr Leu Ser Ala Ala 1205 1210 1215
Glu Cys Thr Leu Asn Glu Cys Val Tyr Ser Ser Asp Phe Gly Gly
1220 1225 1230 Ile Ala
Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly Lys Cys Ala 1235
1240 1245 Val His Val Pro Ser Gly Thr
Ala Thr Leu Lys Glu Ala Ala Val 1250 1255
1260 Glu Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe
Ser Thr Ala 1265 1270 1275
Asn Ile His Pro Glu Phe Arg Leu Gln Ile Cys Thr Ser Tyr Val 1280
1285 1290 Thr Cys Lys Gly Asp
Cys His Pro Pro Lys Asp His Ile Val Thr 1295 1300
1305 His Pro Gln Tyr His Ala Gln Thr Phe Thr
Ala Ala Val Ser Lys 1310 1315 1320
Thr Ala Trp Thr Trp Leu Thr Ser Leu Leu Gly Gly Ser Ala Val
1325 1330 1335 Ile Ile
Ile Ile Gly Leu Val Leu Ala Thr Ile Val Ala Met Tyr 1340
1345 1350 Val Leu Thr Asn Gln Lys His
Asn 1355 1360 358509DNAArtificial
SequenceSynthetic VLP74_21 (VEEV VLP 519 NPNAx6) sequence
35gaattcccat tgcatacgtt gtatccatat cataatatgt acatttatat tggctcatgt
60ccaacattac cgccatgttg acattgatta ttgactagtt attaatagta atcaattacg
120gggtcattag ttcatagccc atatatggag ttccgcgtta cataacttac ggtaaatggc
180ccgcctggct gaccgcccaa cgacccccgc ccattgacgt caataatgac gtatgttccc
240atagtaacgc caatagggac tttccattga cgtcaatggg tggagtattt acggtaaact
300gcccacttgg cagtacatca agtgtatcat atgccaagta cgccccctat tgacgtcaat
360gacggtaaat ggcccgcctg gcattatgcc cagtacatga ccttatggga ctttcctact
420tggcagtaca tctacgtatt agtcatcgct attaccatgg tgatgcggtt ttggcagtac
480atcaatgggc gtggatagcg gtttgactca cggggatttc caagtctcca ccccattgac
540gtcaatggga gtttgttttg gcaccaaaat caacgggact ttccaaaatg tcgtaacaac
600tccgccccat tgacgcaaat gggcggtagg cgtgtacggt gggaggtcta tataagcaga
660gctcgtttag tgaaccgtca gatcgcctgg agacgccatc cacgctgttt tgacctccat
720agaagacacc gggaccgatc cagcctccgt taacggtgga gggcagtgta gtctgagcag
780tactcgttgc tgccgcgcgc gccaccagac ataatagctg acagactaac agactgttcc
840tttccatggg tcttttctgc agtcaccgtc gtcgacacgt gtgatcagat atcgcggccg
900ccaccatgtt cccgttccag ccaatgtatc cgatgcagcc aatgccctat cgcaacccgt
960tcgcggcccc gcgcaggccc tggttcccca gaaccgaccc ttttctggcg atgcaggtgc
1020aggaattaac ccgctcgatg gctaacctga cgttcaagca acgccgggac gcgccacctg
1080aggggccatc cgctaataaa ccgaagaagg aggcctcgca aaaacagaaa gggggaggcc
1140aagggaagaa gaagaagaac caagggaaga agaaggctaa gacagggccg cctaatccga
1200aggcacagaa tggaaacaag aagaagacca acaagaaacc aggcaagaga cagcgcatgg
1260tcatgaaatt ggaatctgac aagacgttcc caatcatgtt ggaagggaag ataaacggct
1320acgcttgtgt ggtcggaggg aagttattca ggccgatgca tgtggaaggc aagatcgaca
1380acgacgttct ggccgcgctt aagacgaaga aagcatccaa atacgatctt gagtatgcag
1440atgtgccaca gaacatgcgg gccgatacat tcaaatacac ccatgagaaa ccccaaggct
1500attacagctg gcatcatgga gcagtccaat atgaaaatgg gcgtttcacg gtgccgaaag
1560gagttggggc caagggagac agcggacgac ccattctgga taaccaggga cgggtggtcg
1620ctattgtgct gggaggtgtg aatgaaggat ctaggacagc cctttcagtc gtcatgtgga
1680acgagaaggg agttaccgtg aagtatactc cagagaactg cgagcaatgg tcactagtga
1740ccaccatgtg tctgctcgcc aatgtgacgt tcccatgtgc tcaaccacca atttgctacg
1800acagaaaacc agcagagact ttggccatgc tcagcgttaa cgttgacaac ccgggctacg
1860atgagctgct ggaagcagct gttaagtgcc ccggaaggaa aaggagatcc accgaggagc
1920tgtttaatga gtataagcta acgcgccctt acatggccag atgcatcaga tgtgcagttg
1980ggagctgcca tagtccaata gcaatcgagg cagtaaagag cgacgggcac gacggttatg
2040ttagacttca gacttcctcg cagtatggcc tggattcctc cggcaactta aagggcagga
2100ccatgcggta tgacatgcac gggaccatta aagagatacc actacatcaa gtgtcactct
2160atacatctcg cccgtgtcac attgtggatg ggcacggtta tttcctgctt gccaggtgcc
2220cggcagggga ctccatcacc atggaattta agaaagattc cgtcagacac tcctgctcgg
2280tgccgtatga agtgaaattt aatcctgtag gcagagaact ctatactcat cccccagaac
2340acggagtaga gcaagcgtgc caagtctacg cacatgatgc acagaacaga ggagcttatg
2400tcgagatgca cctcccgggc tcagaagtgg acagcagttt ggtttccttg agcggcagtt
2460ccggaggaaa cccgaatgcc aatcccaacg cgaaccccaa tgctaaccca aatgccaacc
2520caaacgccaa ccccaacgct ggtggatcct cagtcaccgt gacacctcct gatgggacta
2580gcgccctggt ggaatgcgag tgtggcggca caaagatctc cgagaccatc aacaagacaa
2640aacagttcag ccagtgcaca aagaaggagc agtgcagagc atatcggctg cagaacgata
2700agtgggtgta taattctgac aaactgccca aagcagcggg agccacctta aaaggaaaac
2760tgcatgtccc attcttgctg gcagacggca aatgcaccgt gcctctagca ccagaaccta
2820tgataacctt cggtttcaga tcagtgtcac tgaaactgca ccctaagaat cccacatatc
2880taatcacccg ccaacttgct gatgagcctc actacacgca cgagctcata tctgaaccag
2940ctgttaggaa ttttaccgtc accgaaaaag ggtgggagtt tgtatgggga aaccacccgc
3000cgaaaaggtt ttgggcacag gaaacagcac ccggaaatcc acatgggcta ccgcacgagg
3060tgataactca ttattaccac agatacccta tgtccaccat cctgggtttg tcaatttgtg
3120ccgccattgc aaccgtttcc gttgcagcgt ctacctggct gttttgcaga tcaagagttg
3180cgtgcctaac tccttaccgg ctaacaccta acgctaggat accattttgt ctggctgtgc
3240tttgctgcgc ccgcactgcc cgggccgaga ccacctggga gtccttggat cacctatgga
3300acaataacca acagatgttc tggattcaat tgctgatccc tctggccgcc ttgatcgtag
3360tgactcgcct gctcaggtgc gtgtgctgtg tcgtgccttt tttagtcatg gccggcgccg
3420caggcgccgg cgcctacgag cacgcgacca cgatgccgag ccaagcggga atctcgtata
3480acactatagt caacagagca ggctacgcac cactccctat cagcataaca ccaacaaaga
3540tcaagctgat acctacagtg aacttggagt acgtcacctg ccactacaaa acaggaatgg
3600attcaccagc catcaaatgc tgcggatctc aggaatgcac tccaacttac aggcctgatg
3660aacagtgcaa agtcttcaca ggggtttacc cgttcatgtg gggtggtgca tattgctttt
3720gcgacactga gaacacccaa gtcagcaagg cctacgtaat gaaatctgac gactgccttg
3780cggatcatgc tgaagcatat aaagcgcaca cagcctcagt gcaggcgttc ctcaacatca
3840cagtgggaga acactctatt gtgactaccg tgtatgtgaa tggagaaact cctgtgaatt
3900tcaatggggt caaaataact gcaggtccgc tttccacagc ttggacaccc tttgatcgca
3960aaatcgtgca gtatgccggg gagatctata attatgattt tcctgagtat ggggcaggac
4020aaccaggagc atttggagat atacaatcca gaacagtctc aagctctgat ctgtatgcca
4080ataccaacct agtgctgcag agacccaaag caggagcgat ccacgtgcca tacactcagg
4140caccttcggg ttttgagcaa tggaagaaag ataaagctcc atcattgaaa tttaccgccc
4200ctttcggatg cgaaatatat acaaacccca ttcgcgccga aaactgtgct gtagggtcaa
4260ttccattagc ctttgacatt cccgacgcct tgttcaccag ggtgtcagaa acaccgacac
4320tttcagcggc cgaatgcact cttaacgagt gcgtgtattc ttccgacttt ggtgggatcg
4380ccacggtcaa gtactcggcc agcaagtcag gcaagtgcgc agtccatgtg ccatcaggga
4440ctgctaccct aaaagaagca gcagtcgagc taaccgagca agggtcggcg actatccatt
4500tctcgaccgc aaatatccac ccggagttca ggctccaaat atgcacatca tatgttacgt
4560gcaaaggtga ttgtcacccc ccgaaagacc atattgtgac acaccctcag tatcacgccc
4620aaacatttac agccgcggtg tcaaaaaccg cgtggacgtg gttaacatcc ctgctgggag
4680gatcagccgt aattattata attggcttgg tgctggctac tattgtggcc atgtacgtgc
4740tgaccaacca gaaacataat taaggatcta gatctgctgt gccttctagt tgccagccat
4800ctgttgtttg cccctccccc gtgccttcct tgaccctgga aggtgccact cccactgtcc
4860tttcctaata aaatgaggaa attgcatcgc attgtctgag taggtgtcat tctattctgg
4920ggggtggggt ggggcaggac agcaaggggg aggattggga agacaatagc aggcatgctg
4980gggatgcggt gggctctatg ggtacccagg tgctgaagaa ttgacccggt tcctcctggg
5040ccagaaagaa gcaggcacat ccccttctct gtgacacacc ctgtccacgc ccctggttct
5100tagttccagc cccactcata ggacactcat agctcaggag ggctccgcct tcaatcccac
5160ccgctaaagt acttggagcg gtctctccct ccctcatcag cccaccaaac caaacctagc
5220ctccaagagt gggaagaaat taaagcaaga taggctatta agtgcagagg gagagaaaat
5280gcctccaaca tgtgaggaag taatgagaga aatcatagaa ttttaaggcc atgatttaag
5340gccatcatgg cctaagcttg aaaggagata ggatcaaagc ttggcgtaat catggtcata
5400gctgtttcct gtgtgaaatt gttatccgct cacaattcca cacaacatac gagccggaag
5460cataaagtgt aaagcctggg gtgcctaatg agtgagctaa ctcacattaa ttgcgttgcg
5520ctcactgccc gctttccagt cgggaaacct gtcgtgccag ctgcattaat gaatcggcca
5580acgcgcgggg agaggcggtt tgcgtattgg gcgctcttcc gcttcctcgc tcactgactc
5640gctgcgctcg gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg cggtaatacg
5700gttatccaca gaatcagggg ataacgcagg aaagaacatg tgagcaaaag gccagcaaaa
5760ggccaggaac cgtaaaaagg ccgcgttgct ggcgtttttc cataggctcc gcccccctga
5820cgagcatcac aaaaatcgac gctcaagtca gaggtggcga aacccgacag gactataaag
5880ataccaggcg tttccccctg gaagctccct cgtgcgctct cctgttccga ccctgccgct
5940taccggatac ctgtccgcct ttctcccttc gggaagcgtg gcgctttctc atagctcacg
6000ctgtaggtat ctcagttcgg tgtaggtcgt tcgctccaag ctgggctgtg tgcacgaacc
6060ccccgttcag cccgaccgct gcgccttatc cggtaactat cgtcttgagt ccaacccggt
6120aagacacgac ttatcgccac tggcagcagc cactggtaac aggattagca gagcgaggta
6180tgtaggcggt gctacagagt tcttgaagtg gtggcctaac tacggctaca ctagaagaac
6240agtatttggt atctgcgctc tgctgaagcc agttaccttc ggaaaaagag ttggtagctc
6300ttgatccggc aaacaaacca ccgctggtag cggtggtttt tttgtttgca agcagcagat
6360tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc ttttctacgg ggtctgacgc
6420tcagtggaac gaaaactcac gttaagggat tttggtcatg agattatcaa aaaggatctt
6480cacctagatc cttttaaatt aaaaatgaag ttttaaatca atctaaagta tatatgagta
6540aacttggtct gacagttacc aatgcttaat cagtgaggca cctatctcag cgatctgtct
6600atttcgttca tccatagttg cctgactccc cgtcgtgtag ataactacga tacgggaggg
6660cttaccatct ggccccagtg ctgcaatgat accgcgagaa ccacgctcac cggctccaga
6720tttatcagca ataaaccagc cagccggaag ggccgagcgc agaagtggtc ctgcaacttt
6780atccgcctcc atccagtcta ttaattgttg ccgggaagct agagtaagta gttcgccagt
6840taatagtttg cgcaacgttg ttgccattgc tacaggcatc gtggtgtcac gctcgtcgtt
6900tggtatggct tcattcagct ccggttccca acgatcaagg cgagttacat gatcccccat
6960gttgtgcaaa aaagcggtta gctccttcgg tcctccgatc gttgtcagaa gtaagttggc
7020cgcagtgtta tcactcatgg ttatggcagc actgcataat tctcttactg tcatgccatc
7080cgtaagatgc ttttctgtga ctggtgagta ctcaaccaag tcattctgag aatagtgtat
7140gcggcgaccg agttgctctt gcccggcgtc aatacgggat aataccgcgc cacatagcag
7200aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg cgaaaactct caaggatctt
7260accgctgttg agatccagtt cgatgtaacc cactcgtgca cccaactgat cttcagcatc
7320ttttactttc accagcgttt ctgggtgagc aaaaacagga aggcaaaatg ccgcaaaaaa
7380gggaataagg gcgacacgga aatgttgaat actcatactc ttcctttttc aatattattg
7440aagcatttat cagggttatt gtctcatgag cggatacata tttgaatgta tttagaaaaa
7500taaacaaata ggggttccgc gcacatttcc ccgaaaagtg ccacctgacg tctaagaaac
7560cattattatc atgacattaa cctataaaaa taggcgtatc acgaggccct ttcgggtcgc
7620gcgtttcggt gatgacggtg aaaacctctg acacatgcag ctcccgttga cggtcacagc
7680ttgtctgtaa gcggatgccg ggagcagaca agcccgtcag ggcgcgtcag cgggtgttgg
7740cgggtgtcgg ggctggctta actatgcggc atcagagcag attgtactga gagtgcacca
7800taaaattgta aacgttaata ttttgttaaa attcgcgtta aatttttgtt aaatcagctc
7860attttttaac caataggccg aaatcggcaa aatcccttat aaatcaaaag aatagcccga
7920gatagggttg agtgttgttc cagtttggaa caagagtcca ctattaaaga acgtggactc
7980caacgtcaaa gggcgaaaaa ccgtctatca gggcgatggc ccactacgtg aaccatcacc
8040caaatcaagt tttttggggt cgaggtgccg taaagcacta aatcggaacc ctaaagggag
8100cccccgattt agagcttgac ggggaaagcc ggcgaacgtg gcgagaaagg aagggaagaa
8160agcgaaagga gcgggcgcta gggcgctggc aagtgtagcg gtcacgctgc gcgtaaccac
8220cacacccgcc gcgcttaatg cgccgctaca gggcgcgtac tatggttgct ttgacgtatg
8280cggtgtgaaa taccgcacag atgcgtaagg agaaaatacc gcatcaggcg ccattcgcca
8340ttcaggctgc gcaactgttg ggaagggcga tcggtgcggg cctcttcgct attacgccag
8400ctggcgaaag ggggatgtgc tgcaaggcga ttaagttggg taacgccagg gttttcccag
8460tcacgacgtt gtaaaacgac ggccagtgaa ttccatggtc tcaactttc
8509363858DNAArtificial SequenceSynthetic VLP74_21 (VEEV VLP 519 NPNAx6)
VEEV-NPNAx6 sequence 36atgttcccgt tccagccaat gtatccgatg cagccaatgc
cctatcgcaa cccgttcgcg 60gccccgcgca ggccctggtt ccccagaacc gacccttttc
tggcgatgca ggtgcaggaa 120ttaacccgct cgatggctaa cctgacgttc aagcaacgcc
gggacgcgcc acctgagggg 180ccatccgcta ataaaccgaa gaaggaggcc tcgcaaaaac
agaaaggggg aggccaaggg 240aagaagaaga agaaccaagg gaagaagaag gctaagacag
ggccgcctaa tccgaaggca 300cagaatggaa acaagaagaa gaccaacaag aaaccaggca
agagacagcg catggtcatg 360aaattggaat ctgacaagac gttcccaatc atgttggaag
ggaagataaa cggctacgct 420tgtgtggtcg gagggaagtt attcaggccg atgcatgtgg
aaggcaagat cgacaacgac 480gttctggccg cgcttaagac gaagaaagca tccaaatacg
atcttgagta tgcagatgtg 540ccacagaaca tgcgggccga tacattcaaa tacacccatg
agaaacccca aggctattac 600agctggcatc atggagcagt ccaatatgaa aatgggcgtt
tcacggtgcc gaaaggagtt 660ggggccaagg gagacagcgg acgacccatt ctggataacc
agggacgggt ggtcgctatt 720gtgctgggag gtgtgaatga aggatctagg acagcccttt
cagtcgtcat gtggaacgag 780aagggagtta ccgtgaagta tactccagag aactgcgagc
aatggtcact agtgaccacc 840atgtgtctgc tcgccaatgt gacgttccca tgtgctcaac
caccaatttg ctacgacaga 900aaaccagcag agactttggc catgctcagc gttaacgttg
acaacccggg ctacgatgag 960ctgctggaag cagctgttaa gtgccccgga aggaaaagga
gatccaccga ggagctgttt 1020aatgagtata agctaacgcg cccttacatg gccagatgca
tcagatgtgc agttgggagc 1080tgccatagtc caatagcaat cgaggcagta aagagcgacg
ggcacgacgg ttatgttaga 1140cttcagactt cctcgcagta tggcctggat tcctccggca
acttaaaggg caggaccatg 1200cggtatgaca tgcacgggac cattaaagag ataccactac
atcaagtgtc actctataca 1260tctcgcccgt gtcacattgt ggatgggcac ggttatttcc
tgcttgccag gtgcccggca 1320ggggactcca tcaccatgga atttaagaaa gattccgtca
gacactcctg ctcggtgccg 1380tatgaagtga aatttaatcc tgtaggcaga gaactctata
ctcatccccc agaacacgga 1440gtagagcaag cgtgccaagt ctacgcacat gatgcacaga
acagaggagc ttatgtcgag 1500atgcacctcc cgggctcaga agtggacagc agtttggttt
ccttgagcgg cagttccgga 1560ggaaacccga atgccaatcc caacgcgaac cccaatgcta
acccaaatgc caacccaaac 1620gccaacccca acgctggtgg atcctcagtc accgtgacac
ctcctgatgg gactagcgcc 1680ctggtggaat gcgagtgtgg cggcacaaag atctccgaga
ccatcaacaa gacaaaacag 1740ttcagccagt gcacaaagaa ggagcagtgc agagcatatc
ggctgcagaa cgataagtgg 1800gtgtataatt ctgacaaact gcccaaagca gcgggagcca
ccttaaaagg aaaactgcat 1860gtcccattct tgctggcaga cggcaaatgc accgtgcctc
tagcaccaga acctatgata 1920accttcggtt tcagatcagt gtcactgaaa ctgcacccta
agaatcccac atatctaatc 1980acccgccaac ttgctgatga gcctcactac acgcacgagc
tcatatctga accagctgtt 2040aggaatttta ccgtcaccga aaaagggtgg gagtttgtat
ggggaaacca cccgccgaaa 2100aggttttggg cacaggaaac agcacccgga aatccacatg
ggctaccgca cgaggtgata 2160actcattatt accacagata ccctatgtcc accatcctgg
gtttgtcaat ttgtgccgcc 2220attgcaaccg tttccgttgc agcgtctacc tggctgtttt
gcagatcaag agttgcgtgc 2280ctaactcctt accggctaac acctaacgct aggataccat
tttgtctggc tgtgctttgc 2340tgcgcccgca ctgcccgggc cgagaccacc tgggagtcct
tggatcacct atggaacaat 2400aaccaacaga tgttctggat tcaattgctg atccctctgg
ccgccttgat cgtagtgact 2460cgcctgctca ggtgcgtgtg ctgtgtcgtg ccttttttag
tcatggccgg cgccgcaggc 2520gccggcgcct acgagcacgc gaccacgatg ccgagccaag
cgggaatctc gtataacact 2580atagtcaaca gagcaggcta cgcaccactc cctatcagca
taacaccaac aaagatcaag 2640ctgataccta cagtgaactt ggagtacgtc acctgccact
acaaaacagg aatggattca 2700ccagccatca aatgctgcgg atctcaggaa tgcactccaa
cttacaggcc tgatgaacag 2760tgcaaagtct tcacaggggt ttacccgttc atgtggggtg
gtgcatattg cttttgcgac 2820actgagaaca cccaagtcag caaggcctac gtaatgaaat
ctgacgactg ccttgcggat 2880catgctgaag catataaagc gcacacagcc tcagtgcagg
cgttcctcaa catcacagtg 2940ggagaacact ctattgtgac taccgtgtat gtgaatggag
aaactcctgt gaatttcaat 3000ggggtcaaaa taactgcagg tccgctttcc acagcttgga
caccctttga tcgcaaaatc 3060gtgcagtatg ccggggagat ctataattat gattttcctg
agtatggggc aggacaacca 3120ggagcatttg gagatataca atccagaaca gtctcaagct
ctgatctgta tgccaatacc 3180aacctagtgc tgcagagacc caaagcagga gcgatccacg
tgccatacac tcaggcacct 3240tcgggttttg agcaatggaa gaaagataaa gctccatcat
tgaaatttac cgcccctttc 3300ggatgcgaaa tatatacaaa ccccattcgc gccgaaaact
gtgctgtagg gtcaattcca 3360ttagcctttg acattcccga cgccttgttc accagggtgt
cagaaacacc gacactttca 3420gcggccgaat gcactcttaa cgagtgcgtg tattcttccg
actttggtgg gatcgccacg 3480gtcaagtact cggccagcaa gtcaggcaag tgcgcagtcc
atgtgccatc agggactgct 3540accctaaaag aagcagcagt cgagctaacc gagcaagggt
cggcgactat ccatttctcg 3600accgcaaata tccacccgga gttcaggctc caaatatgca
catcatatgt tacgtgcaaa 3660ggtgattgtc accccccgaa agaccatatt gtgacacacc
ctcagtatca cgcccaaaca 3720tttacagccg cggtgtcaaa aaccgcgtgg acgtggttaa
catccctgct gggaggatca 3780gccgtaatta ttataattgg cttggtgctg gctactattg
tggccatgta cgtgctgacc 3840aaccagaaac ataattaa
3858371285PRTArtificial SequenceSynthetic VLP74_21
(VEEV VLP 519 NPNAx6) sequence 37Met Phe Pro Phe Gln Pro Met Tyr
Pro Met Gln Pro Met Pro Tyr Arg 1 5 10
15 Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg
Thr Asp Pro 20 25 30
Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn Leu
35 40 45 Thr Phe Lys Gln
Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60 Lys Pro Lys Lys Glu Ala Ser Gln
Lys Gln Lys Gly Gly Gly Gln Gly 65 70
75 80 Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys
Thr Gly Pro Pro 85 90
95 Asn Pro Lys Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro
100 105 110 Gly Lys Arg
Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys Thr Phe 115
120 125 Pro Ile Met Leu Glu Gly Lys Ile
Asn Gly Tyr Ala Cys Val Val Gly 130 135
140 Gly Lys Leu Phe Arg Pro Met His Val Glu Gly Lys Ile
Asp Asn Asp 145 150 155
160 Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175 Tyr Ala Asp Val
Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr 180
185 190 His Glu Lys Pro Gln Gly Tyr Tyr Ser
Trp His His Gly Ala Val Gln 195 200
205 Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala
Lys Gly 210 215 220
Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile 225
230 235 240 Val Leu Gly Gly Val
Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val 245
250 255 Met Trp Asn Glu Lys Gly Val Thr Val Lys
Tyr Thr Pro Glu Asn Cys 260 265
270 Glu Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala Asn Val
Thr 275 280 285 Phe
Pro Cys Ala Gln Pro Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290
295 300 Thr Leu Ala Met Leu Ser
Val Asn Val Asp Asn Pro Gly Tyr Asp Glu 305 310
315 320 Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg
Lys Arg Arg Ser Thr 325 330
335 Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg
340 345 350 Cys Ile
Arg Cys Ala Val Gly Ser Cys His Ser Pro Ile Ala Ile Glu 355
360 365 Ala Val Lys Ser Asp Gly His
Asp Gly Tyr Val Arg Leu Gln Thr Ser 370 375
380 Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys
Gly Arg Thr Met 385 390 395
400 Arg Tyr Asp Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val
405 410 415 Ser Leu Tyr
Thr Ser Arg Pro Cys His Ile Val Asp Gly His Gly Tyr 420
425 430 Phe Leu Leu Ala Arg Cys Pro Ala
Gly Asp Ser Ile Thr Met Glu Phe 435 440
445 Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr
Glu Val Lys 450 455 460
Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly 465
470 475 480 Val Glu Gln Ala
Cys Gln Val Tyr Ala His Asp Ala Gln Asn Arg Gly 485
490 495 Ala Tyr Val Glu Met His Leu Pro Gly
Ser Glu Val Asp Ser Ser Leu 500 505
510 Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn Ala Asn
Pro Asn 515 520 525
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540 Ala Gly Gly Ser Ser
Val Thr Val Thr Pro Pro Asp Gly Thr Ser Ala 545 550
555 560 Leu Val Glu Cys Glu Cys Gly Gly Thr Lys
Ile Ser Glu Thr Ile Asn 565 570
575 Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys Arg
Ala 580 585 590 Tyr
Arg Leu Gln Asn Asp Lys Trp Val Tyr Asn Ser Asp Lys Leu Pro 595
600 605 Lys Ala Ala Gly Ala Thr
Leu Lys Gly Lys Leu His Val Pro Phe Leu 610 615
620 Leu Ala Asp Gly Lys Cys Thr Val Pro Leu Ala
Pro Glu Pro Met Ile 625 630 635
640 Thr Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys Asn Pro
645 650 655 Thr Tyr
Leu Ile Thr Arg Gln Leu Ala Asp Glu Pro His Tyr Thr His 660
665 670 Glu Leu Ile Ser Glu Pro Ala
Val Arg Asn Phe Thr Val Thr Glu Lys 675 680
685 Gly Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys
Arg Phe Trp Ala 690 695 700
Gln Glu Thr Ala Pro Gly Asn Pro His Gly Leu Pro His Glu Val Ile 705
710 715 720 Thr His Tyr
Tyr His Arg Tyr Pro Met Ser Thr Ile Leu Gly Leu Ser 725
730 735 Ile Cys Ala Ala Ile Ala Thr Val
Ser Val Ala Ala Ser Thr Trp Leu 740 745
750 Phe Cys Arg Ser Arg Val Ala Cys Leu Thr Pro Tyr Arg
Leu Thr Pro 755 760 765
Asn Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala Arg Thr 770
775 780 Ala Arg Ala Glu
Thr Thr Trp Glu Ser Leu Asp His Leu Trp Asn Asn 785 790
795 800 Asn Gln Gln Met Phe Trp Ile Gln Leu
Leu Ile Pro Leu Ala Ala Leu 805 810
815 Ile Val Val Thr Arg Leu Leu Arg Cys Val Cys Cys Val Val
Pro Phe 820 825 830
Leu Val Met Ala Gly Ala Ala Gly Ala Gly Ala Tyr Glu His Ala Thr
835 840 845 Thr Met Pro Ser
Gln Ala Gly Ile Ser Tyr Asn Thr Ile Val Asn Arg 850
855 860 Ala Gly Tyr Ala Pro Leu Pro Ile
Ser Ile Thr Pro Thr Lys Ile Lys 865 870
875 880 Leu Ile Pro Thr Val Asn Leu Glu Tyr Val Thr Cys
His Tyr Lys Thr 885 890
895 Gly Met Asp Ser Pro Ala Ile Lys Cys Cys Gly Ser Gln Glu Cys Thr
900 905 910 Pro Thr Tyr
Arg Pro Asp Glu Gln Cys Lys Val Phe Thr Gly Val Tyr 915
920 925 Pro Phe Met Trp Gly Gly Ala Tyr
Cys Phe Cys Asp Thr Glu Asn Thr 930 935
940 Gln Val Ser Lys Ala Tyr Val Met Lys Ser Asp Asp Cys
Leu Ala Asp 945 950 955
960 His Ala Glu Ala Tyr Lys Ala His Thr Ala Ser Val Gln Ala Phe Leu
965 970 975 Asn Ile Thr Val
Gly Glu His Ser Ile Val Thr Thr Val Tyr Val Asn 980
985 990 Gly Glu Thr Pro Val Asn Phe Asn
Gly Val Lys Ile Thr Ala Gly Pro 995 1000
1005 Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg Lys
Ile Val Gln Tyr 1010 1015 1020
Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr Gly Ala Gly
1025 1030 1035 Gln Pro Gly
Ala Phe Gly Asp Ile Gln Ser Arg Thr Val Ser Ser 1040
1045 1050 Ser Asp Leu Tyr Ala Asn Thr Asn
Leu Val Leu Gln Arg Pro Lys 1055 1060
1065 Ala Gly Ala Ile His Val Pro Tyr Thr Gln Ala Pro Ser
Gly Phe 1070 1075 1080
Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu Lys Phe Thr Ala 1085
1090 1095 Pro Phe Gly Cys Glu
Ile Tyr Thr Asn Pro Ile Arg Ala Glu Asn 1100 1105
1110 Cys Ala Val Gly Ser Ile Pro Leu Ala Phe
Asp Ile Pro Asp Ala 1115 1120 1125
Leu Phe Thr Arg Val Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu
1130 1135 1140 Cys Thr
Leu Asn Glu Cys Val Tyr Ser Ser Asp Phe Gly Gly Ile 1145
1150 1155 Ala Thr Val Lys Tyr Ser Ala
Ser Lys Ser Gly Lys Cys Ala Val 1160 1165
1170 His Val Pro Ser Gly Thr Ala Thr Leu Lys Glu Ala
Ala Val Glu 1175 1180 1185
Leu Thr Glu Gln Gly Ser Ala Thr Ile His Phe Ser Thr Ala Asn 1190
1195 1200 Ile His Pro Glu Phe
Arg Leu Gln Ile Cys Thr Ser Tyr Val Thr 1205 1210
1215 Cys Lys Gly Asp Cys His Pro Pro Lys Asp
His Ile Val Thr His 1220 1225 1230
Pro Gln Tyr His Ala Gln Thr Phe Thr Ala Ala Val Ser Lys Thr
1235 1240 1245 Ala Trp
Thr Trp Leu Thr Ser Leu Leu Gly Gly Ser Ala Val Ile 1250
1255 1260 Ile Ile Ile Gly Leu Val Leu
Ala Thr Ile Val Ala Met Tyr Val 1265 1270
1275 Leu Thr Asn Gln Lys His Asn 1280
1285 387305DNAArtificial SequenceSynthetic VLP74_15 (CHI VLP 532
NPNAx6) sequence 38tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat
gcagctcccg gagacggtca 60cagcttgtct gtaagcggat gccgggagca gacaagcccg
tcagggcgcg tcagcgggtg 120ttggcgggtg tcggggctgg cttaactatg cggcatcaga
gcagattgta ctgagagtgc 180accatatgcg gtgtgaaata ccgcacagat gcgtaaggag
aaaataccgc atcaggcgcc 240attcgccatt caggctgcgc aactgttggg aagggcgatc
ggtgcgggcc tcttcgctat 300tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt
aagttgggta acgccagggt 360tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt
gacgcgtgtt ggcattgatt 420attgactagt tattaatagt aatcaattac ggggtcatta
gttcatagcc catatatgga 480gttccgcgtt acataactta cggtaaatgg cccgcctggc
tgaccgccca acgacccccg 540cccattgacg tcaataatga cgtatgttcc catagtaacg
ccaataggga ctttccattg 600acgtcaatgg gtggagtatt tacggtaaac tgcccacttg
gcagtacatc aagtgtatca 660tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa
tggcccgcct ggcattatgc 720ccagtacatg accttatggg actttcctac ttggcagtac
atctacgtat tagtcatcgc 780tattaccatg gtgatgcggt tttggcagta catcaatggg
cgtggatagc ggtttgactc 840acggggattt ccaagtctcc accccattga cgtcaatggg
agtttgtttt ggcaccaaaa 900tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca
ttgacgcaaa tgggcggtag 960gcgtgtacgg tgggaggtct atataagcag agctcgttta
gtgaaccgtc agataactgc 1020aggtcgacga tatcgcggcc gccaccatgg agttcatccc
gacgcaaact ttctataaca 1080gaaggtacca accccgaccc tgggccccac gccctacaat
tcaagtaatt agacctagac 1140cacgtccaca gaggcaggct gggcaactcg cccagctgat
ctccgcagtc aacaaattga 1200ccatgcgcgc ggtacctcaa cagaagcctc gcagaaatcg
gaaaaacaag aagcaaaggc 1260agaagaagca ggcgccgcaa aacgacccaa agcaaaagaa
gcaaccacca caaaagaagc 1320cggctcaaaa gaagaagaaa ccaggccgta gggagagaat
gtgcatgaaa attgaaaatg 1380attgcatctt cgaagtcaag catgaaggca aagtgatggg
ctacgcatgc ctggtggggg 1440ataaagtaat gaaaccagca catgtgaagg gaactatcga
caatgccgat ctggctaaac 1500tggcctttaa gcggtcgtct aaatacgatc ttgaatgtgc
acagataccg gtgcacatga 1560agtctgatgc ctcgaagttt acccacgaga aacccgaggg
gtactataac tggcatcacg 1620gagcagtgca gtattcagga ggccggttca ctatcccgac
gggtgcaggc aagccgggag 1680acagcggcag accgatcttc gacaacaaag gacgggtggt
ggccatcgtc ctaggagggg 1740ccaacgaagg tgcccgcacg gccctctccg tggtgacgtg
gaacaaagac atcgtcacaa 1800aaattacccc tgagggagcc gaagagtgga gcctcgccct
cccggtcttg tgcctgttgg 1860caaacactac attcccctgc tctcagccgc cttgcacacc
ctgctgctac gaaaaggaac 1920cggaaagcac cttgcgcatg cttgaggaca acgtgatgag
acccggatac taccagctac 1980taaaagcatc gctgacttgc tctccccacc gccaaagacg
cagtactaag gacaatttta 2040atgtctataa agccacaaga ccatatctag ctcattgtcc
tgactgcgga gaagggcatt 2100cgtgccacag ccctatcgca ttggagcgca tcagaaatga
agcaacggac ggaacgctga 2160aaatccaggt ctctttgcag atcgggataa agacagatga
cagccacgat tggaccaagc 2220tgcgctatat ggatagccat acgccagcgg acgcggagcg
agccggattg cttgtaagga 2280cttcagcacc gtgcacgatc accgggacca tgggacactt
tattctcgcc cgatgcccga 2340aaggagagac gctgacagtg ggatttacgg acagcagaaa
gatcagccac acatgcacac 2400acccgttcca tcatgaacca cctgtgatag gtagggagag
gttccactct cgaccacaac 2460atggtaaaga gttaccttgc agcacgtacg tgcagagcac
cgctgccact gctgaggaga 2520tagaggtgca tatgccccca gatactcctg accgcacgct
gatgacgcag cagtctggca 2580acgtgaagat cacagttaat gggcagacgg tgcggtacaa
gtgcaactgc ggtggctccg 2640gaggaaaccc gaatgccaat cccaacgcga accccaatgc
taacccaaat gccaacccaa 2700acgccaaccc caacgctggt ggatccaacg agggactgac
aaccacagac aaagtgatca 2760ataactgcaa aattgatcag tgccatgctg cagtcactaa
tcacaagaat tggcaataca 2820actccccttt agtcccgcgc aacgctgaac tcggggaccg
taaaggaaag atccacatcc 2880cattcccatt ggcaaacgtg acttgcagag tgccaaaagc
aagaaaccct acagtaactt 2940acggaaaaaa ccaagtcacc atgctgctgt atcctgacca
tccgacactc ttgtcttacc 3000gtaacatggg acaggaacca aattaccacg aggagtgggt
gacacacaag aaggaggtta 3060ccttgaccgt gcctactgag ggtctggagg tcacttgggg
caacaacgaa ccatacaagt 3120actggccgca gatgtctacg aacggtactg ctcatggtca
cccacatgag ataatcttgt 3180actattatga gctgtacccc actatgactg tagtcattgt
gtcggtggcc tcgttcgtgc 3240ttctgtcgat ggtgggcaca gcagtgggaa tgtgtgtgtg
cgcacggcgc agatgcatta 3300caccatatga attaacacca ggagccactg ttcccttcct
gctcagcctg ctatgctgcg 3360tcagaacgac caaggcggcc acatattacg aggctgcggc
atatctatgg aacgaacagc 3420agcccctgtt ctggttgcag gctcttatcc cgctggccgc
cttgatcgtc ctgtgcaact 3480gtctgaaact cttgccatgc tgctgtaaga ccctggcttt
tttagccgta atgagcatcg 3540gtgcccacac tgtgagcgcg tacgaacacg taacagtgat
cccgaacacg gtgggagtac 3600cgtataagac tcttgtcaac agaccgggtt acagccccat
ggtgttggag atggagctac 3660aatcagtcac cttggaacca acactgtcac ttgactacat
cacgtgcgag tacaaaactg 3720tcatcccctc cccgtacgtg aagtgctgtg gtacagcaga
gtgcaaggac aagagcctac 3780cagactacag ctgcaaggtc tttactggag tctacccatt
tatgtggggc ggcgcctact 3840gcttttgcga cgccgaaaat acgcaattga gcgaggcaca
tgtagagaaa tctgaatctt 3900gcaaaacaga gtttgcatcg gcctacagag cccacaccgc
atcggcgtcg gcgaagctcc 3960gcgtccttta ccaaggaaac aacattaccg tagctgccta
cgctaacggt gaccatgccg 4020tcacagtaaa ggacgccaag tttgtcgtgg gcccaatgtc
ctccgcctgg acaccttttg 4080acaacaaaat cgtggtgtac aaaggcgacg tctacaacat
ggactaccca ccttttggcg 4140caggaagacc aggacaattt ggtgacattc aaagtcgtac
accggaaagt aaagacgttt 4200atgccaacac tcagttggta ctacagaggc cagcagcagg
cacggtacat gtaccatact 4260ctcaggcacc atctggcttc aagtattggc tgaaggaacg
aggagcatcg ctacagcaca 4320cggcaccgtt cggttgccag attgcgacaa acccggtaag
agctgtaaat tgcgctgtgg 4380ggaacatacc aatttccatc gacataccgg atgcggcctt
tactagggtt gtcgatgcac 4440cctctgtaac ggacatgtca tgcgaagtac cagcctgcac
tcactcctcc gactttgggg 4500gcgtcgccat catcaaatac acagctagca agaaaggtaa
atgtgcagta cattcgatga 4560ccaacgccgt taccattcga gaagccgacg tagaagtaga
ggggaactcc cagctgcaaa 4620tatccttctc aacagccctg gcaagcgccg agtttcgcgt
gcaagtgtgc tccacacaag 4680tacactgcgc agccgcatgc caccctccaa aggaccacat
agtcaattac ccagcatcac 4740acaccaccct tggggtccag gatatatcca caacggcaat
gtcttgggtg cagaagatta 4800cgggaggagt aggattaatt gttgctgttg ctgccttaat
tttaattgtg gtgctatgcg 4860tgtcgtttag caggcactaa ggatctagat ctgctgtgcc
ttctagttgc cagccatctg 4920ttgtttgccc ctcccccgtg ccttccttga ccctggaagg
tgccactccc actgtccttt 4980cctaataaaa tgaggaaatt gcatcgcatt gtctgagtag
gtgtcattct attctggggg 5040gtggggtggg gcaggacagc aagggggagg attgggaaga
caatagcagg catgctgggg 5100atgcggtggg ctctatggct cgagcatggt catagctgtt
tcctgtgtga aattgttatc 5160cgctcacaat tccacacaac atacgagccg gaagcataaa
gtgtaaagcc tggggtgcct 5220aatgagtgag ctaactcaca ttaattgcgt tgcgctcact
gcccgctttc cagtcgggaa 5280acctgtcgtg ccagctgcat taatgaatcg gccaacgcgc
ggggagaggc ggtttgcgta 5340ttgggcgctc ttccgcttcc tcgctcactg actcgctgcg
ctcggtcgtt cggctgcggc 5400gagcggtatc agctcactca aaggcggtaa tacggttatc
cacagaatca ggggataacg 5460caggaaagaa catgtgagca aaaggccagc aaaaggccag
gaaccgtaaa aaggccgcgt 5520tgctggcgtt tttccatagg ctccgccccc ctgacgagca
tcacaaaaat cgacgctcaa 5580gtcagaggtg gcgaaacccg acaggactat aaagatacca
ggcgtttccc cctggaagct 5640ccctcgtgcg ctctcctgtt ccgaccctgc cgcttaccgg
atacctgtcc gcctttctcc 5700cttcgggaag cgtggcgctt tctcatagct cacgctgtag
gtatctcagt tcggtgtagg 5760tcgttcgctc caagctgggc tgtgtgcacg aaccccccgt
tcagcccgac cgctgcgcct 5820tatccggtaa ctatcgtctt gagtccaacc cggtaagaca
cgacttatcg ccactggcag 5880cagccactgg taacaggatt agcagagcga ggtatgtagg
cggtgctaca gagttcttga 5940agtggtggcc taactacggc tacactagaa gaacagtatt
tggtatctgc gctctgctga 6000agccagttac cttcggaaaa agagttggta gctcttgatc
cggcaaacaa accaccgctg 6060gtagcggtgg tttttttgtt tgcaagcagc agattacgcg
cagaaaaaaa ggatctcaag 6120aagatccttt gatcttttct acggggtctg acgctcagtg
gaacgaaaac tcacgttaag 6180ggattttggt catgagatta tcaaaaagga tcttcaccta
gatcctttta aattaaaaat 6240gaagttttaa atcaatctaa agtatatatg agtaaacttg
gtctgacagt tagaaaaact 6300catcgagcat caaatgaaac tgcaatttat tcatatcagg
attatcaata ccatattttt 6360gaaaaagccg tttctgtaat gaaggagaaa actcaccgag
gcagttccat aggatggcaa 6420gatcctggta tcggtctgcg attccgactc gtccaacatc
aatacaacct attaatttcc 6480cctcgtcaaa aataaggtta tcaagtgaga aatcaccatg
agtgacgact gaatccggtg 6540agaatggcaa aagtttatgc atttctttcc agacttgttc
aacaggccag ccattacgct 6600cgtcatcaaa atcactcgca tcaaccaaac cgttattcat
tcgtgattgc gcctgagcga 6660gacgaaatac gcgatcgctg ttaaaaggac aattacaaac
aggaatcgaa tgcaaccggc 6720gcaggaacac tgccagcgca tcaacaatat tttcacctga
atcaggatat tcttctaata 6780cctggaatgc tgttttccca gggatcgcag tggtgagtaa
ccatgcatca tcaggagtac 6840ggataaaatg cttgatggtc ggaagaggca taaattccgt
cagccagttt agtctgacca 6900tctcatctgt aacatcattg gcaacgctac ctttgccatg
tttcagaaac aactctggcg 6960catcgggctt cccatacaat cgatagattg tcgcacctga
ttgcccgaca ttatcgcgag 7020cccatttata cccatataaa tcagcatcca tgttggaatt
taatcgcggc ctagagcaag 7080acgtttcccg ttgaatatgg ctcatactct tcctttttca
atattattga agcatttatc 7140agggttattg tctcatgagc ggatacatat ttgaatgtat
ttagaaaaat aaacaaatag 7200gggttccgcg cacatttccc cgaaaagtgc cacctgacgt
ctaagaaacc attattatca 7260tgacattaac ctataaaaat aggcgtatca cgaggccctt
tcgtc 7305391277PRTArtificial SequenceSynthetic
VLP74_15 (CHI VLP 532 NPNAx6) sequence 39Met Glu Phe Ile Pro Thr
Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro 1 5
10 15 Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val
Ile Arg Pro Arg Pro 20 25
30 Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala
Val 35 40 45 Asn
Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60 Arg Lys Asn Lys Lys Gln
Arg Gln Lys Lys Gln Ala Pro Gln Asn Asp 65 70
75 80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys
Pro Ala Gln Lys Lys 85 90
95 Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp
100 105 110 Cys Ile
Phe Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys 115
120 125 Leu Val Gly Asp Lys Val Met
Lys Pro Ala His Val Lys Gly Thr Ile 130 135
140 Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg
Ser Ser Lys Tyr 145 150 155
160 Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175 Lys Phe Thr
His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190 Ala Val Gln Tyr Ser Gly Gly Arg
Phe Thr Ile Pro Thr Gly Ala Gly 195 200
205 Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys
Gly Arg Val 210 215 220
Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225
230 235 240 Ser Val Val Thr
Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu 245
250 255 Gly Ala Glu Glu Trp Ser Leu Ala Leu
Pro Val Leu Cys Leu Leu Ala 260 265
270 Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys
Cys Tyr 275 280 285
Glu Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300 Arg Pro Gly Tyr Tyr
Gln Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305 310
315 320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn
Phe Asn Val Tyr Lys Ala 325 330
335 Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His
Ser 340 345 350 Cys
His Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365 Gly Thr Leu Lys Ile Gln
Val Ser Leu Gln Ile Gly Ile Lys Thr Asp 370 375
380 Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met
Asp Ser His Thr Pro 385 390 395
400 Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys
405 410 415 Thr Ile
Thr Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430 Gly Glu Thr Leu Thr Val Gly
Phe Thr Asp Ser Arg Lys Ile Ser His 435 440
445 Thr Cys Thr His Pro Phe His His Glu Pro Pro Val
Ile Gly Arg Glu 450 455 460
Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465
470 475 480 Tyr Val Gln
Ser Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met 485
490 495 Pro Pro Asp Thr Pro Asp Arg Thr
Leu Met Thr Gln Gln Ser Gly Asn 500 505
510 Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys
Cys Asn Cys 515 520 525
Gly Gly Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540 Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser 545 550
555 560 Asn Glu Gly Leu Thr Thr Thr Asp Lys
Val Ile Asn Asn Cys Lys Ile 565 570
575 Asp Gln Cys His Ala Ala Val Thr Asn His Lys Asn Trp Gln
Tyr Asn 580 585 590
Ser Pro Leu Val Pro Arg Asn Ala Glu Leu Gly Asp Arg Lys Gly Lys
595 600 605 Ile His Ile Pro
Phe Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys 610
615 620 Ala Arg Asn Pro Thr Val Thr Tyr
Gly Lys Asn Gln Val Thr Met Leu 625 630
635 640 Leu Tyr Pro Asp His Pro Thr Leu Leu Ser Tyr Arg
Asn Met Gly Gln 645 650
655 Glu Pro Asn Tyr His Glu Glu Trp Val Thr His Lys Lys Glu Val Thr
660 665 670 Leu Thr Val
Pro Thr Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu 675
680 685 Pro Tyr Lys Tyr Trp Pro Gln Met
Ser Thr Asn Gly Thr Ala His Gly 690 695
700 His Pro His Glu Ile Ile Leu Tyr Tyr Tyr Glu Leu Tyr
Pro Thr Met 705 710 715
720 Thr Val Val Ile Val Ser Val Ala Ser Phe Val Leu Leu Ser Met Val
725 730 735 Gly Thr Ala Val
Gly Met Cys Val Cys Ala Arg Arg Arg Cys Ile Thr 740
745 750 Pro Tyr Glu Leu Thr Pro Gly Ala Thr
Val Pro Phe Leu Leu Ser Leu 755 760
765 Leu Cys Cys Val Arg Thr Thr Lys Ala Ala Thr Tyr Tyr Glu
Ala Ala 770 775 780
Ala Tyr Leu Trp Asn Glu Gln Gln Pro Leu Phe Trp Leu Gln Ala Leu 785
790 795 800 Ile Pro Leu Ala Ala
Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu 805
810 815 Pro Cys Cys Cys Lys Thr Leu Ala Phe Leu
Ala Val Met Ser Ile Gly 820 825
830 Ala His Thr Val Ser Ala Tyr Glu His Val Thr Val Ile Pro Asn
Thr 835 840 845 Val
Gly Val Pro Tyr Lys Thr Leu Val Asn Arg Pro Gly Tyr Ser Pro 850
855 860 Met Val Leu Glu Met Glu
Leu Gln Ser Val Thr Leu Glu Pro Thr Leu 865 870
875 880 Ser Leu Asp Tyr Ile Thr Cys Glu Tyr Lys Thr
Val Ile Pro Ser Pro 885 890
895 Tyr Val Lys Cys Cys Gly Thr Ala Glu Cys Lys Asp Lys Ser Leu Pro
900 905 910 Asp Tyr
Ser Cys Lys Val Phe Thr Gly Val Tyr Pro Phe Met Trp Gly 915
920 925 Gly Ala Tyr Cys Phe Cys Asp
Ala Glu Asn Thr Gln Leu Ser Glu Ala 930 935
940 His Val Glu Lys Ser Glu Ser Cys Lys Thr Glu Phe
Ala Ser Ala Tyr 945 950 955
960 Arg Ala His Thr Ala Ser Ala Ser Ala Lys Leu Arg Val Leu Tyr Gln
965 970 975 Gly Asn Asn
Ile Thr Val Ala Ala Tyr Ala Asn Gly Asp His Ala Val 980
985 990 Thr Val Lys Asp Ala Lys Phe Val
Val Gly Pro Met Ser Ser Ala Trp 995 1000
1005 Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys
Gly Asp Val Tyr 1010 1015 1020
Asn Met Asp Tyr Pro Pro Phe Gly Ala Gly Arg Pro Gly Gln Phe
1025 1030 1035 Gly Asp Ile
Gln Ser Arg Thr Pro Glu Ser Lys Asp Val Tyr Ala 1040
1045 1050 Asn Thr Gln Leu Val Leu Gln Arg
Pro Ala Ala Gly Thr Val His 1055 1060
1065 Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp
Leu Lys 1070 1075 1080
Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro Phe Gly Cys Gln 1085
1090 1095 Ile Ala Thr Asn Pro
Val Arg Ala Val Asn Cys Ala Val Gly Asn 1100 1105
1110 Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala
Ala Phe Thr Arg Val 1115 1120 1125
Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu Val Pro Ala
1130 1135 1140 Cys Thr
His Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys Tyr 1145
1150 1155 Thr Ala Ser Lys Lys Gly Lys
Cys Ala Val His Ser Met Thr Asn 1160 1165
1170 Ala Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu
Gly Asn Ser 1175 1180 1185
Gln Leu Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu Phe 1190
1195 1200 Arg Val Gln Val Cys
Ser Thr Gln Val His Cys Ala Ala Ala Cys 1205 1210
1215 His Pro Pro Lys Asp His Ile Val Asn Tyr
Pro Ala Ser His Thr 1220 1225 1230
Thr Leu Gly Val Gln Asp Ile Ser Thr Thr Ala Met Ser Trp Val
1235 1240 1245 Gln Lys
Ile Thr Gly Gly Val Gly Leu Ile Val Ala Val Ala Ala 1250
1255 1260 Leu Ile Leu Ile Val Val Leu
Cys Val Ser Phe Ser Arg His 1265 1270
1275 407533DNAArtificial SequenceSynthetic VLP78_15 (CHI VLP 532
NPNAx25) sequence 40tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat
gcagctcccg gagacggtca 60cagcttgtct gtaagcggat gccgggagca gacaagcccg
tcagggcgcg tcagcgggtg 120ttggcgggtg tcggggctgg cttaactatg cggcatcaga
gcagattgta ctgagagtgc 180accatatgcg gtgtgaaata ccgcacagat gcgtaaggag
aaaataccgc atcaggcgcc 240attcgccatt caggctgcgc aactgttggg aagggcgatc
ggtgcgggcc tcttcgctat 300tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt
aagttgggta acgccagggt 360tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt
gacgcgtgtt ggcattgatt 420attgactagt tattaatagt aatcaattac ggggtcatta
gttcatagcc catatatgga 480gttccgcgtt acataactta cggtaaatgg cccgcctggc
tgaccgccca acgacccccg 540cccattgacg tcaataatga cgtatgttcc catagtaacg
ccaataggga ctttccattg 600acgtcaatgg gtggagtatt tacggtaaac tgcccacttg
gcagtacatc aagtgtatca 660tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa
tggcccgcct ggcattatgc 720ccagtacatg accttatggg actttcctac ttggcagtac
atctacgtat tagtcatcgc 780tattaccatg gtgatgcggt tttggcagta catcaatggg
cgtggatagc ggtttgactc 840acggggattt ccaagtctcc accccattga cgtcaatggg
agtttgtttt ggcaccaaaa 900tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca
ttgacgcaaa tgggcggtag 960gcgtgtacgg tgggaggtct atataagcag agctcgttta
gtgaaccgtc agataactgc 1020aggtcgacga tatcgcggcc gccaccatgg agttcatccc
gacgcaaact ttctataaca 1080gaaggtacca accccgaccc tgggccccac gccctacaat
tcaagtaatt agacctagac 1140cacgtccaca gaggcaggct gggcaactcg cccagctgat
ctccgcagtc aacaaattga 1200ccatgcgcgc ggtacctcaa cagaagcctc gcagaaatcg
gaaaaacaag aagcaaaggc 1260agaagaagca ggcgccgcaa aacgacccaa agcaaaagaa
gcaaccacca caaaagaagc 1320cggctcaaaa gaagaagaaa ccaggccgta gggagagaat
gtgcatgaaa attgaaaatg 1380attgcatctt cgaagtcaag catgaaggca aagtgatggg
ctacgcatgc ctggtggggg 1440ataaagtaat gaaaccagca catgtgaagg gaactatcga
caatgccgat ctggctaaac 1500tggcctttaa gcggtcgtct aaatacgatc ttgaatgtgc
acagataccg gtgcacatga 1560agtctgatgc ctcgaagttt acccacgaga aacccgaggg
gtactataac tggcatcacg 1620gagcagtgca gtattcagga ggccggttca ctatcccgac
gggtgcaggc aagccgggag 1680acagcggcag accgatcttc gacaacaaag gacgggtggt
ggccatcgtc ctaggagggg 1740ccaacgaagg tgcccgcacg gccctctccg tggtgacgtg
gaacaaagac atcgtcacaa 1800aaattacccc tgagggagcc gaagagtgga gcctcgccct
cccggtcttg tgcctgttgg 1860caaacactac attcccctgc tctcagccgc cttgcacacc
ctgctgctac gaaaaggaac 1920cggaaagcac cttgcgcatg cttgaggaca acgtgatgag
acccggatac taccagctac 1980taaaagcatc gctgacttgc tctccccacc gccaaagacg
cagtactaag gacaatttta 2040atgtctataa agccacaaga ccatatctag ctcattgtcc
tgactgcgga gaagggcatt 2100cgtgccacag ccctatcgca ttggagcgca tcagaaatga
agcaacggac ggaacgctga 2160aaatccaggt ctctttgcag atcgggataa agacagatga
cagccacgat tggaccaagc 2220tgcgctatat ggatagccat acgccagcgg acgcggagcg
agccggattg cttgtaagga 2280cttcagcacc gtgcacgatc accgggacca tgggacactt
tattctcgcc cgatgcccga 2340aaggagagac gctgacagtg ggatttacgg acagcagaaa
gatcagccac acatgcacac 2400acccgttcca tcatgaacca cctgtgatag gtagggagag
gttccactct cgaccacaac 2460atggtaaaga gttaccttgc agcacgtacg tgcagagcac
cgctgccact gctgaggaga 2520tagaggtgca tatgccccca gatactcctg accgcacgct
gatgacgcag cagtctggca 2580acgtgaagat cacagttaat gggcagacgg tgcggtacaa
gtgcaactgc ggtggctccg 2640gaggaaaccc gaatgccaat cccaacgcga accccaacgc
taaccccaac gccaatccga 2700atgcaaaccc gaacgttgac ccaaacgcca acccgaatgc
caatcccaac gcgaacccca 2760atgctaaccc aaatgccaac ccaaacgcca accccaacgc
taatccaaac gccaacccta 2820acgccaatcc caacgcgaat cctaacgcta atcccaacgc
aaatcccaat gctaatccga 2880acgcgaaccc taatgcaaac cccaacgcca acccgaacgc
taacccgaac gctaatccca 2940acgccggtgg atccaacgag ggactgacaa ccacagacaa
agtgatcaat aactgcaaaa 3000ttgatcagtg ccatgctgca gtcactaatc acaagaattg
gcaatacaac tcccctttag 3060tcccgcgcaa cgctgaactc ggggaccgta aaggaaagat
ccacatccca ttcccattgg 3120caaacgtgac ttgcagagtg ccaaaagcaa gaaaccctac
agtaacttac ggaaaaaacc 3180aagtcaccat gctgctgtat cctgaccatc cgacactctt
gtcttaccgt aacatgggac 3240aggaaccaaa ttaccacgag gagtgggtga cacacaagaa
ggaggttacc ttgaccgtgc 3300ctactgaggg tctggaggtc acttggggca acaacgaacc
atacaagtac tggccgcaga 3360tgtctacgaa cggtactgct catggtcacc cacatgagat
aatcttgtac tattatgagc 3420tgtaccccac tatgactgta gtcattgtgt cggtggcctc
gttcgtgctt ctgtcgatgg 3480tgggcacagc agtgggaatg tgtgtgtgcg cacggcgcag
atgcattaca ccatatgaat 3540taacaccagg agccactgtt cccttcctgc tcagcctgct
atgctgcgtc agaacgacca 3600aggcggccac atattacgag gctgcggcat atctatggaa
cgaacagcag cccctgttct 3660ggttgcaggc tcttatcccg ctggccgcct tgatcgtcct
gtgcaactgt ctgaaactct 3720tgccatgctg ctgtaagacc ctggcttttt tagccgtaat
gagcatcggt gcccacactg 3780tgagcgcgta cgaacacgta acagtgatcc cgaacacggt
gggagtaccg tataagactc 3840ttgtcaacag accgggttac agccccatgg tgttggagat
ggagctacaa tcagtcacct 3900tggaaccaac actgtcactt gactacatca cgtgcgagta
caaaactgtc atcccctccc 3960cgtacgtgaa gtgctgtggt acagcagagt gcaaggacaa
gagcctacca gactacagct 4020gcaaggtctt tactggagtc tacccattta tgtggggcgg
cgcctactgc ttttgcgacg 4080ccgaaaatac gcaattgagc gaggcacatg tagagaaatc
tgaatcttgc aaaacagagt 4140ttgcatcggc ctacagagcc cacaccgcat cggcgtcggc
gaagctccgc gtcctttacc 4200aaggaaacaa cattaccgta gctgcctacg ctaacggtga
ccatgccgtc acagtaaagg 4260acgccaagtt tgtcgtgggc ccaatgtcct ccgcctggac
accttttgac aacaaaatcg 4320tggtgtacaa aggcgacgtc tacaacatgg actacccacc
ttttggcgca ggaagaccag 4380gacaatttgg tgacattcaa agtcgtacac cggaaagtaa
agacgtttat gccaacactc 4440agttggtact acagaggcca gcagcaggca cggtacatgt
accatactct caggcaccat 4500ctggcttcaa gtattggctg aaggaacgag gagcatcgct
acagcacacg gcaccgttcg 4560gttgccagat tgcgacaaac ccggtaagag ctgtaaattg
cgctgtgggg aacataccaa 4620tttccatcga cataccggat gcggccttta ctagggttgt
cgatgcaccc tctgtaacgg 4680acatgtcatg cgaagtacca gcctgcactc actcctccga
ctttgggggc gtcgccatca 4740tcaaatacac agctagcaag aaaggtaaat gtgcagtaca
ttcgatgacc aacgccgtta 4800ccattcgaga agccgacgta gaagtagagg ggaactccca
gctgcaaata tccttctcaa 4860cagccctggc aagcgccgag tttcgcgtgc aagtgtgctc
cacacaagta cactgcgcag 4920ccgcatgcca ccctccaaag gaccacatag tcaattaccc
agcatcacac accacccttg 4980gggtccagga tatatccaca acggcaatgt cttgggtgca
gaagattacg ggaggagtag 5040gattaattgt tgctgttgct gccttaattt taattgtggt
gctatgcgtg tcgtttagca 5100ggcactaagg atctagatct gctgtgcctt ctagttgcca
gccatctgtt gtttgcccct 5160cccccgtgcc ttccttgacc ctggaaggtg ccactcccac
tgtcctttcc taataaaatg 5220aggaaattgc atcgcattgt ctgagtaggt gtcattctat
tctggggggt ggggtggggc 5280aggacagcaa gggggaggat tgggaagaca atagcaggca
tgctggggat gcggtgggct 5340ctatggctcg agcatggtca tagctgtttc ctgtgtgaaa
ttgttatccg ctcacaattc 5400cacacaacat acgagccgga agcataaagt gtaaagcctg
gggtgcctaa tgagtgagct 5460aactcacatt aattgcgttg cgctcactgc ccgctttcca
gtcgggaaac ctgtcgtgcc 5520agctgcatta atgaatcggc caacgcgcgg ggagaggcgg
tttgcgtatt gggcgctctt 5580ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg
gctgcggcga gcggtatcag 5640ctcactcaaa ggcggtaata cggttatcca cagaatcagg
ggataacgca ggaaagaaca 5700tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa
ggccgcgttg ctggcgtttt 5760tccataggct ccgcccccct gacgagcatc acaaaaatcg
acgctcaagt cagaggtggc 5820gaaacccgac aggactataa agataccagg cgtttccccc
tggaagctcc ctcgtgcgct 5880ctcctgttcc gaccctgccg cttaccggat acctgtccgc
ctttctccct tcgggaagcg 5940tggcgctttc tcatagctca cgctgtaggt atctcagttc
ggtgtaggtc gttcgctcca 6000agctgggctg tgtgcacgaa ccccccgttc agcccgaccg
ctgcgcctta tccggtaact 6060atcgtcttga gtccaacccg gtaagacacg acttatcgcc
actggcagca gccactggta 6120acaggattag cagagcgagg tatgtaggcg gtgctacaga
gttcttgaag tggtggccta 6180actacggcta cactagaaga acagtatttg gtatctgcgc
tctgctgaag ccagttacct 6240tcggaaaaag agttggtagc tcttgatccg gcaaacaaac
caccgctggt agcggtggtt 6300tttttgtttg caagcagcag attacgcgca gaaaaaaagg
atctcaagaa gatcctttga 6360tcttttctac ggggtctgac gctcagtgga acgaaaactc
acgttaaggg attttggtca 6420tgagattatc aaaaaggatc ttcacctaga tccttttaaa
ttaaaaatga agttttaaat 6480caatctaaag tatatatgag taaacttggt ctgacagtta
gaaaaactca tcgagcatca 6540aatgaaactg caatttattc atatcaggat tatcaatacc
atatttttga aaaagccgtt 6600tctgtaatga aggagaaaac tcaccgaggc agttccatag
gatggcaaga tcctggtatc 6660ggtctgcgat tccgactcgt ccaacatcaa tacaacctat
taatttcccc tcgtcaaaaa 6720taaggttatc aagtgagaaa tcaccatgag tgacgactga
atccggtgag aatggcaaaa 6780gtttatgcat ttctttccag acttgttcaa caggccagcc
attacgctcg tcatcaaaat 6840cactcgcatc aaccaaaccg ttattcattc gtgattgcgc
ctgagcgaga cgaaatacgc 6900gatcgctgtt aaaaggacaa ttacaaacag gaatcgaatg
caaccggcgc aggaacactg 6960ccagcgcatc aacaatattt tcacctgaat caggatattc
ttctaatacc tggaatgctg 7020ttttcccagg gatcgcagtg gtgagtaacc atgcatcatc
aggagtacgg ataaaatgct 7080tgatggtcgg aagaggcata aattccgtca gccagtttag
tctgaccatc tcatctgtaa 7140catcattggc aacgctacct ttgccatgtt tcagaaacaa
ctctggcgca tcgggcttcc 7200catacaatcg atagattgtc gcacctgatt gcccgacatt
atcgcgagcc catttatacc 7260catataaatc agcatccatg ttggaattta atcgcggcct
agagcaagac gtttcccgtt 7320gaatatggct catactcttc ctttttcaat attattgaag
catttatcag ggttattgtc 7380tcatgagcgg atacatattt gaatgtattt agaaaaataa
acaaataggg gttccgcgca 7440catttccccg aaaagtgcca cctgacgtct aagaaaccat
tattatcatg acattaacct 7500ataaaaatag gcgtatcacg aggccctttc gtc
7533411353PRTArtificial SequenceSynthetic VLP78_15
(CHI VLP 532 NPNAx25) sequence 41Met Glu Phe Ile Pro Thr Gln Thr
Phe Tyr Asn Arg Arg Tyr Gln Pro 1 5 10
15 Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val Ile Arg
Pro Arg Pro 20 25 30
Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val
35 40 45 Asn Lys Leu Thr
Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50
55 60 Arg Lys Asn Lys Lys Gln Arg Gln
Lys Lys Gln Ala Pro Gln Asn Asp 65 70
75 80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro
Ala Gln Lys Lys 85 90
95 Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp
100 105 110 Cys Ile Phe
Glu Val Lys His Glu Gly Lys Val Met Gly Tyr Ala Cys 115
120 125 Leu Val Gly Asp Lys Val Met Lys
Pro Ala His Val Lys Gly Thr Ile 130 135
140 Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser
Ser Lys Tyr 145 150 155
160 Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser
165 170 175 Lys Phe Thr His
Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 180
185 190 Ala Val Gln Tyr Ser Gly Gly Arg Phe
Thr Ile Pro Thr Gly Ala Gly 195 200
205 Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly
Arg Val 210 215 220
Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225
230 235 240 Ser Val Val Thr Trp
Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu 245
250 255 Gly Ala Glu Glu Trp Ser Leu Ala Leu Pro
Val Leu Cys Leu Leu Ala 260 265
270 Asn Thr Thr Phe Pro Cys Ser Gln Pro Pro Cys Thr Pro Cys Cys
Tyr 275 280 285 Glu
Lys Glu Pro Glu Ser Thr Leu Arg Met Leu Glu Asp Asn Val Met 290
295 300 Arg Pro Gly Tyr Tyr Gln
Leu Leu Lys Ala Ser Leu Thr Cys Ser Pro 305 310
315 320 His Arg Gln Arg Arg Ser Thr Lys Asp Asn Phe
Asn Val Tyr Lys Ala 325 330
335 Thr Arg Pro Tyr Leu Ala His Cys Pro Asp Cys Gly Glu Gly His Ser
340 345 350 Cys His
Ser Pro Ile Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr Asp 355
360 365 Gly Thr Leu Lys Ile Gln Val
Ser Leu Gln Ile Gly Ile Lys Thr Asp 370 375
380 Asp Ser His Asp Trp Thr Lys Leu Arg Tyr Met Asp
Ser His Thr Pro 385 390 395
400 Ala Asp Ala Glu Arg Ala Gly Leu Leu Val Arg Thr Ser Ala Pro Cys
405 410 415 Thr Ile Thr
Gly Thr Met Gly His Phe Ile Leu Ala Arg Cys Pro Lys 420
425 430 Gly Glu Thr Leu Thr Val Gly Phe
Thr Asp Ser Arg Lys Ile Ser His 435 440
445 Thr Cys Thr His Pro Phe His His Glu Pro Pro Val Ile
Gly Arg Glu 450 455 460
Arg Phe His Ser Arg Pro Gln His Gly Lys Glu Leu Pro Cys Ser Thr 465
470 475 480 Tyr Val Gln Ser
Thr Ala Ala Thr Ala Glu Glu Ile Glu Val His Met 485
490 495 Pro Pro Asp Thr Pro Asp Arg Thr Leu
Met Thr Gln Gln Ser Gly Asn 500 505
510 Val Lys Ile Thr Val Asn Gly Gln Thr Val Arg Tyr Lys Cys
Asn Cys 515 520 525
Gly Gly Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540 Ala Asn Pro Asn Ala
Asn Pro Asn Ala Asn Pro Asn Val Asp Pro Asn 545 550
555 560 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn 565 570
575 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro
Asn 580 585 590 Ala
Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 595
600 605 Ala Asn Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 610 615
620 Ala Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly
Ser Asn Glu Gly Leu 625 630 635
640 Thr Thr Thr Asp Lys Val Ile Asn Asn Cys Lys Ile Asp Gln Cys His
645 650 655 Ala Ala
Val Thr Asn His Lys Asn Trp Gln Tyr Asn Ser Pro Leu Val 660
665 670 Pro Arg Asn Ala Glu Leu Gly
Asp Arg Lys Gly Lys Ile His Ile Pro 675 680
685 Phe Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys
Ala Arg Asn Pro 690 695 700
Thr Val Thr Tyr Gly Lys Asn Gln Val Thr Met Leu Leu Tyr Pro Asp 705
710 715 720 His Pro Thr
Leu Leu Ser Tyr Arg Asn Met Gly Gln Glu Pro Asn Tyr 725
730 735 His Glu Glu Trp Val Thr His Lys
Lys Glu Val Thr Leu Thr Val Pro 740 745
750 Thr Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu Pro
Tyr Lys Tyr 755 760 765
Trp Pro Gln Met Ser Thr Asn Gly Thr Ala His Gly His Pro His Glu 770
775 780 Ile Ile Leu Tyr
Tyr Tyr Glu Leu Tyr Pro Thr Met Thr Val Val Ile 785 790
795 800 Val Ser Val Ala Ser Phe Val Leu Leu
Ser Met Val Gly Thr Ala Val 805 810
815 Gly Met Cys Val Cys Ala Arg Arg Arg Cys Ile Thr Pro Tyr
Glu Leu 820 825 830
Thr Pro Gly Ala Thr Val Pro Phe Leu Leu Ser Leu Leu Cys Cys Val
835 840 845 Arg Thr Thr Lys
Ala Ala Thr Tyr Tyr Glu Ala Ala Ala Tyr Leu Trp 850
855 860 Asn Glu Gln Gln Pro Leu Phe Trp
Leu Gln Ala Leu Ile Pro Leu Ala 865 870
875 880 Ala Leu Ile Val Leu Cys Asn Cys Leu Lys Leu Leu
Pro Cys Cys Cys 885 890
895 Lys Thr Leu Ala Phe Leu Ala Val Met Ser Ile Gly Ala His Thr Val
900 905 910 Ser Ala Tyr
Glu His Val Thr Val Ile Pro Asn Thr Val Gly Val Pro 915
920 925 Tyr Lys Thr Leu Val Asn Arg Pro
Gly Tyr Ser Pro Met Val Leu Glu 930 935
940 Met Glu Leu Gln Ser Val Thr Leu Glu Pro Thr Leu Ser
Leu Asp Tyr 945 950 955
960 Ile Thr Cys Glu Tyr Lys Thr Val Ile Pro Ser Pro Tyr Val Lys Cys
965 970 975 Cys Gly Thr Ala
Glu Cys Lys Asp Lys Ser Leu Pro Asp Tyr Ser Cys 980
985 990 Lys Val Phe Thr Gly Val Tyr Pro
Phe Met Trp Gly Gly Ala Tyr Cys 995 1000
1005 Phe Cys Asp Ala Glu Asn Thr Gln Leu Ser Glu
Ala His Val Glu 1010 1015 1020
Lys Ser Glu Ser Cys Lys Thr Glu Phe Ala Ser Ala Tyr Arg Ala
1025 1030 1035 His Thr Ala
Ser Ala Ser Ala Lys Leu Arg Val Leu Tyr Gln Gly 1040
1045 1050 Asn Asn Ile Thr Val Ala Ala Tyr
Ala Asn Gly Asp His Ala Val 1055 1060
1065 Thr Val Lys Asp Ala Lys Phe Val Val Gly Pro Met Ser
Ser Ala 1070 1075 1080
Trp Thr Pro Phe Asp Asn Lys Ile Val Val Tyr Lys Gly Asp Val 1085
1090 1095 Tyr Asn Met Asp Tyr
Pro Pro Phe Gly Ala Gly Arg Pro Gly Gln 1100 1105
1110 Phe Gly Asp Ile Gln Ser Arg Thr Pro Glu
Ser Lys Asp Val Tyr 1115 1120 1125
Ala Asn Thr Gln Leu Val Leu Gln Arg Pro Ala Ala Gly Thr Val
1130 1135 1140 His Val
Pro Tyr Ser Gln Ala Pro Ser Gly Phe Lys Tyr Trp Leu 1145
1150 1155 Lys Glu Arg Gly Ala Ser Leu
Gln His Thr Ala Pro Phe Gly Cys 1160 1165
1170 Gln Ile Ala Thr Asn Pro Val Arg Ala Val Asn Cys
Ala Val Gly 1175 1180 1185
Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala Ala Phe Thr Arg 1190
1195 1200 Val Val Asp Ala Pro
Ser Val Thr Asp Met Ser Cys Glu Val Pro 1205 1210
1215 Ala Cys Thr His Ser Ser Asp Phe Gly Gly
Val Ala Ile Ile Lys 1220 1225 1230
Tyr Thr Ala Ser Lys Lys Gly Lys Cys Ala Val His Ser Met Thr
1235 1240 1245 Asn Ala
Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn 1250
1255 1260 Ser Gln Leu Gln Ile Ser Phe
Ser Thr Ala Leu Ala Ser Ala Glu 1265 1270
1275 Phe Arg Val Gln Val Cys Ser Thr Gln Val His Cys
Ala Ala Ala 1280 1285 1290
Cys His Pro Pro Lys Asp His Ile Val Asn Tyr Pro Ala Ser His 1295
1300 1305 Thr Thr Leu Gly Val
Gln Asp Ile Ser Thr Thr Ala Met Ser Trp 1310 1315
1320 Val Gln Lys Ile Thr Gly Gly Val Gly Leu
Ile Val Ala Val Ala 1325 1330 1335
Ala Leu Ile Leu Ile Val Val Leu Cys Val Ser Phe Ser Arg His
1340 1345 1350
427329DNAArtificial SequenceSynthetic VLP74_25 (VEEV VLP 519 NPNAx6)
sequence 42tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg
gagacggtca 60cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg
tcagcgggtg 120ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta
ctgagagtgc 180accatatgcg gtgtgaaata ccgcacagat gcgtaaggag aaaataccgc
atcaggcgcc 240attcgccatt caggctgcgc aactgttggg aagggcgatc ggtgcgggcc
tcttcgctat 300tacgccagct ggcgaaaggg ggatgtgctg caaggcgatt aagttgggta
acgccagggt 360tttcccagtc acgacgttgt aaaacgacgg ccagtgaatt gacgcgtgtt
ggcattgatt 420attgactagt tattaatagt aatcaattac ggggtcatta gttcatagcc
catatatgga 480gttccgcgtt acataactta cggtaaatgg cccgcctggc tgaccgccca
acgacccccg 540cccattgacg tcaataatga cgtatgttcc catagtaacg ccaataggga
ctttccattg 600acgtcaatgg gtggagtatt tacggtaaac tgcccacttg gcagtacatc
aagtgtatca 660tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa tggcccgcct
ggcattatgc 720ccagtacatg accttatggg actttcctac ttggcagtac atctacgtat
tagtcatcgc 780tattaccatg gtgatgcggt tttggcagta catcaatggg cgtggatagc
ggtttgactc 840acggggattt ccaagtctcc accccattga cgtcaatggg agtttgtttt
ggcaccaaaa 900tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca ttgacgcaaa
tgggcggtag 960gcgtgtacgg tgggaggtct atataagcag agctcgttta gtgaaccgtc
agataactgc 1020aggtcgacga tatcgcggcc gccaccatgt tcccgttcca gccaatgtat
ccgatgcagc 1080caatgcccta tcgcaacccg ttcgcggccc cgcgcaggcc ctggttcccc
agaaccgacc 1140cttttctggc gatgcaggtg caggaattaa cccgctcgat ggctaacctg
acgttcaagc 1200aacgccggga cgcgccacct gaggggccat ccgctaataa accgaagaag
gaggcctcgc 1260aaaaacagaa agggggaggc caagggaaga agaagaagaa ccaagggaag
aagaaggcta 1320agacagggcc gcctaatccg aaggcacaga atggaaacaa gaagaagacc
aacaagaaac 1380caggcaagag acagcgcatg gtcatgaaat tggaatctga caagacgttc
ccaatcatgt 1440tggaagggaa gataaacggc tacgcttgtg tggtcggagg gaagttattc
aggccgatgc 1500atgtggaagg caagatcgac aacgacgttc tggccgcgct taagacgaag
aaagcatcca 1560aatacgatct tgagtatgca gatgtgccac agaacatgcg ggccgataca
ttcaaataca 1620cccatgagaa accccaaggc tattacagct ggcatcatgg agcagtccaa
tatgaaaatg 1680ggcgtttcac ggtgccgaaa ggagttgggg ccaagggaga cagcggacga
cccattctgg 1740ataaccaggg acgggtggtc gctattgtgc tgggaggtgt gaatgaagga
tctaggacag 1800ccctttcagt cgtcatgtgg aacgagaagg gagttaccgt gaagtatact
ccagagaact 1860gcgagcaatg gtcactagtg accaccatgt gtctgctcgc caatgtgacg
ttcccatgtg 1920ctcaaccacc aatttgctac gacagaaaac cagcagagac tttggccatg
ctcagcgtta 1980acgttgacaa cccgggctac gatgagctgc tggaagcagc tgttaagtgc
cccggaagga 2040aaaggagatc caccgaggag ctgtttaatg agtataagct aacgcgccct
tacatggcca 2100gatgcatcag atgtgcagtt gggagctgcc atagtccaat agcaatcgag
gcagtaaaga 2160gcgacgggca cgacggttat gttagacttc agacttcctc gcagtatggc
ctggattcct 2220ccggcaactt aaagggcagg accatgcggt atgacatgca cgggaccatt
aaagagatac 2280cactacatca agtgtcactc tatacatctc gcccgtgtca cattgtggat
gggcacggtt 2340atttcctgct tgccaggtgc ccggcagggg actccatcac catggaattt
aagaaagatt 2400ccgtcagaca ctcctgctcg gtgccgtatg aagtgaaatt taatcctgta
ggcagagaac 2460tctatactca tcccccagaa cacggagtag agcaagcgtg ccaagtctac
gcacatgatg 2520cacagaacag aggagcttat gtcgagatgc acctcccggg ctcagaagtg
gacagcagtt 2580tggtttcctt gagcggcagt tccggaggaa acccgaatgc caatcccaac
gcgaacccca 2640atgctaaccc aaatgccaac ccaaacgcca accccaacgc tggtggatcc
tcagtcaccg 2700tgacacctcc tgatgggact agcgccctgg tggaatgcga gtgtggcggc
acaaagatct 2760ccgagaccat caacaagaca aaacagttca gccagtgcac aaagaaggag
cagtgcagag 2820catatcggct gcagaacgat aagtgggtgt ataattctga caaactgccc
aaagcagcgg 2880gagccacctt aaaaggaaaa ctgcatgtcc cattcttgct ggcagacggc
aaatgcaccg 2940tgcctctagc accagaacct atgataacct tcggtttcag atcagtgtca
ctgaaactgc 3000accctaagaa tcccacatat ctaatcaccc gccaacttgc tgatgagcct
cactacacgc 3060acgagctcat atctgaacca gctgttagga attttaccgt caccgaaaaa
gggtgggagt 3120ttgtatgggg aaaccacccg ccgaaaaggt tttgggcaca ggaaacagca
cccggaaatc 3180cacatgggct accgcacgag gtgataactc attattacca cagataccct
atgtccacca 3240tcctgggttt gtcaatttgt gccgccattg caaccgtttc cgttgcagcg
tctacctggc 3300tgttttgcag atcaagagtt gcgtgcctaa ctccttaccg gctaacacct
aacgctagga 3360taccattttg tctggctgtg ctttgctgcg cccgcactgc ccgggccgag
accacctggg 3420agtccttgga tcacctatgg aacaataacc aacagatgtt ctggattcaa
ttgctgatcc 3480ctctggccgc cttgatcgta gtgactcgcc tgctcaggtg cgtgtgctgt
gtcgtgcctt 3540ttttagtcat ggccggcgcc gcaggcgccg gcgcctacga gcacgcgacc
acgatgccga 3600gccaagcggg aatctcgtat aacactatag tcaacagagc aggctacgca
ccactcccta 3660tcagcataac accaacaaag atcaagctga tacctacagt gaacttggag
tacgtcacct 3720gccactacaa aacaggaatg gattcaccag ccatcaaatg ctgcggatct
caggaatgca 3780ctccaactta caggcctgat gaacagtgca aagtcttcac aggggtttac
ccgttcatgt 3840ggggtggtgc atattgcttt tgcgacactg agaacaccca agtcagcaag
gcctacgtaa 3900tgaaatctga cgactgcctt gcggatcatg ctgaagcata taaagcgcac
acagcctcag 3960tgcaggcgtt cctcaacatc acagtgggag aacactctat tgtgactacc
gtgtatgtga 4020atggagaaac tcctgtgaat ttcaatgggg tcaaaataac tgcaggtccg
ctttccacag 4080cttggacacc ctttgatcgc aaaatcgtgc agtatgccgg ggagatatat
aattatgatt 4140ttcctgagta tggggcagga caaccaggag catttggaga tatacaatcc
agaacagtct 4200caagctctga tctgtatgcc aataccaacc tagtgctgca gagacccaaa
gcaggagcga 4260tccacgtgcc atacactcag gcaccttcgg gttttgagca atggaagaaa
gataaagctc 4320catcattgaa atttaccgcc cctttcggat gcgaaatata tacaaacccc
attcgcgccg 4380aaaactgtgc tgtagggtca attccattag cctttgacat tcccgacgcc
ttgttcacca 4440gggtgtcaga aacaccgaca ctttcagcgg ccgaatgcac tcttaacgag
tgcgtgtatt 4500cttccgactt tggtgggatc gccacggtca agtactcggc cagcaagtca
ggcaagtgcg 4560cagtccatgt gccatcaggg actgctaccc taaaagaagc agcagtcgag
ctaaccgagc 4620aagggtcggc gactatccat ttctcgaccg caaatatcca cccggagttc
aggctccaaa 4680tatgcacatc atatgttacg tgcaaaggtg attgtcaccc cccgaaagac
catattgtga 4740cacaccctca gtatcacgcc caaacattta cagccgcggt gtcaaaaacc
gcgtggacgt 4800ggttaacatc cctgctggga ggatcagccg taattattat aattggcttg
gtgctggcta 4860ctattgtggc catgtacgtg ctgaccaacc agaaacataa ttaaggatct
agatctgctg 4920tgccttctag ttgccagcca tctgttgttt gcccctcccc cgtgccttcc
ttgaccctgg 4980aaggtgccac tcccactgtc ctttcctaat aaaatgagga aattgcatcg
cattgtctga 5040gtaggtgtca ttctattctg gggggtgggg tggggcagga cagcaagggg
gaggattggg 5100aagacaatag caggcatgct ggggatgcgg tgggctctat ggctcgagca
tggtcatagc 5160tgtttcctgt gtgaaattgt tatccgctca caattccaca caacatacga
gccggaagca 5220taaagtgtaa agcctggggt gcctaatgag tgagctaact cacattaatt
gcgttgcgct 5280cactgcccgc tttccagtcg ggaaacctgt cgtgccagct gcattaatga
atcggccaac 5340gcgcggggag aggcggtttg cgtattgggc gctcttccgc ttcctcgctc
actgactcgc 5400tgcgctcggt cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg
gtaatacggt 5460tatccacaga atcaggggat aacgcaggaa agaacatgtg agcaaaaggc
cagcaaaagg 5520ccaggaaccg taaaaaggcc gcgttgctgg cgtttttcca taggctccgc
ccccctgacg 5580agcatcacaa aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga
ctataaagat 5640accaggcgtt tccccctgga agctccctcg tgcgctctcc tgttccgacc
ctgccgctta 5700ccggatacct gtccgccttt ctcccttcgg gaagcgtggc gctttctcat
agctcacgct 5760gtaggtatct cagttcggtg taggtcgttc gctccaagct gggctgtgtg
cacgaacccc 5820ccgttcagcc cgaccgctgc gccttatccg gtaactatcg tcttgagtcc
aacccggtaa 5880gacacgactt atcgccactg gcagcagcca ctggtaacag gattagcaga
gcgaggtatg 5940taggcggtgc tacagagttc ttgaagtggt ggcctaacta cggctacact
agaagaacag 6000tatttggtat ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt
ggtagctctt 6060gatccggcaa acaaaccacc gctggtagcg gtggtttttt tgtttgcaag
cagcagatta 6120cgcgcagaaa aaaaggatct caagaagatc ctttgatctt ttctacgggg
tctgacgctc 6180agtggaacga aaactcacgt taagggattt tggtcatgag attatcaaaa
aggatcttca 6240cctagatcct tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata
tatgagtaaa 6300cttggtctga cagttagaaa aactcatcga gcatcaaatg aaactgcaat
ttattcatat 6360caggattatc aataccatat ttttgaaaaa gccgtttctg taatgaagga
gaaaactcac 6420cgaggcagtt ccataggatg gcaagatcct ggtatcggtc tgcgattccg
actcgtccaa 6480catcaataca acctattaat ttcccctcgt caaaaataag gttatcaagt
gagaaatcac 6540catgagtgac gactgaatcc ggtgagaatg gcaaaagttt atgcatttct
ttccagactt 6600gttcaacagg ccagccatta cgctcgtcat caaaatcact cgcatcaacc
aaaccgttat 6660tcattcgtga ttgcgcctga gcgagacgaa atacgcgatc gctgttaaaa
ggacaattac 6720aaacaggaat cgaatgcaac cggcgcagga acactgccag cgcatcaaca
atattttcac 6780ctgaatcagg atattcttct aatacctgga atgctgtttt cccagggatc
gcagtggtga 6840gtaaccatgc atcatcagga gtacggataa aatgcttgat ggtcggaaga
ggcataaatt 6900ccgtcagcca gtttagtctg accatctcat ctgtaacatc attggcaacg
ctacctttgc 6960catgtttcag aaacaactct ggcgcatcgg gcttcccata caatcgatag
attgtcgcac 7020ctgattgccc gacattatcg cgagcccatt tatacccata taaatcagca
tccatgttgg 7080aatttaatcg cggcctagag caagacgttt cccgttgaat atggctcata
ctcttccttt 7140ttcaatatta ttgaagcatt tatcagggtt attgtctcat gagcggatac
atatttgaat 7200gtatttagaa aaataaacaa ataggggttc cgcgcacatt tccccgaaaa
gtgccacctg 7260acgtctaaga aaccattatt atcatgacat taacctataa aaataggcgt
atcacgaggc 7320cctttcgtc
7329431285PRTArtificial SequenceSynthetic VLP74_25 (VEEV VLP
519 NPNAx6) sequence 43Met Phe Pro Phe Gln Pro Met Tyr Pro Met Gln
Pro Met Pro Tyr Arg 1 5 10
15 Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp Phe Pro Arg Thr Asp Pro
20 25 30 Phe Leu
Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn Leu 35
40 45 Thr Phe Lys Gln Arg Arg Asp
Ala Pro Pro Glu Gly Pro Ser Ala Asn 50 55
60 Lys Pro Lys Lys Glu Ala Ser Gln Lys Gln Lys Gly
Gly Gly Gln Gly 65 70 75
80 Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala Lys Thr Gly Pro Pro
85 90 95 Asn Pro Lys
Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro 100
105 110 Gly Lys Arg Gln Arg Met Val Met
Lys Leu Glu Ser Asp Lys Thr Phe 115 120
125 Pro Ile Met Leu Glu Gly Lys Ile Asn Gly Tyr Ala Cys
Val Val Gly 130 135 140
Gly Lys Leu Phe Arg Pro Met His Val Glu Gly Lys Ile Asp Asn Asp 145
150 155 160 Val Leu Ala Ala
Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu 165
170 175 Tyr Ala Asp Val Pro Gln Asn Met Arg
Ala Asp Thr Phe Lys Tyr Thr 180 185
190 His Glu Lys Pro Gln Gly Tyr Tyr Ser Trp His His Gly Ala
Val Gln 195 200 205
Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly Ala Lys Gly 210
215 220 Asp Ser Gly Arg Pro
Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile 225 230
235 240 Val Leu Gly Gly Val Asn Glu Gly Ser Arg
Thr Ala Leu Ser Val Val 245 250
255 Met Trp Asn Glu Lys Gly Val Thr Val Lys Tyr Thr Pro Glu Asn
Cys 260 265 270 Glu
Gln Trp Ser Leu Val Thr Thr Met Cys Leu Leu Ala Asn Val Thr 275
280 285 Phe Pro Cys Ala Gln Pro
Pro Ile Cys Tyr Asp Arg Lys Pro Ala Glu 290 295
300 Thr Leu Ala Met Leu Ser Val Asn Val Asp Asn
Pro Gly Tyr Asp Glu 305 310 315
320 Leu Leu Glu Ala Ala Val Lys Cys Pro Gly Arg Lys Arg Arg Ser Thr
325 330 335 Glu Glu
Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met Ala Arg 340
345 350 Cys Ile Arg Cys Ala Val Gly
Ser Cys His Ser Pro Ile Ala Ile Glu 355 360
365 Ala Val Lys Ser Asp Gly His Asp Gly Tyr Val Arg
Leu Gln Thr Ser 370 375 380
Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg Thr Met 385
390 395 400 Arg Tyr Asp
Met His Gly Thr Ile Lys Glu Ile Pro Leu His Gln Val 405
410 415 Ser Leu Tyr Thr Ser Arg Pro Cys
His Ile Val Asp Gly His Gly Tyr 420 425
430 Phe Leu Leu Ala Arg Cys Pro Ala Gly Asp Ser Ile Thr
Met Glu Phe 435 440 445
Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr Glu Val Lys 450
455 460 Phe Asn Pro Val
Gly Arg Glu Leu Tyr Thr His Pro Pro Glu His Gly 465 470
475 480 Val Glu Gln Ala Cys Gln Val Tyr Ala
His Asp Ala Gln Asn Arg Gly 485 490
495 Ala Tyr Val Glu Met His Leu Pro Gly Ser Glu Val Asp Ser
Ser Leu 500 505 510
Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn Ala Asn Pro Asn
515 520 525 Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 530
535 540 Ala Gly Gly Ser Ser Val Thr Val
Thr Pro Pro Asp Gly Thr Ser Ala 545 550
555 560 Leu Val Glu Cys Glu Cys Gly Gly Thr Lys Ile Ser
Glu Thr Ile Asn 565 570
575 Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys Arg Ala
580 585 590 Tyr Arg Leu
Gln Asn Asp Lys Trp Val Tyr Asn Ser Asp Lys Leu Pro 595
600 605 Lys Ala Ala Gly Ala Thr Leu Lys
Gly Lys Leu His Val Pro Phe Leu 610 615
620 Leu Ala Asp Gly Lys Cys Thr Val Pro Leu Ala Pro Glu
Pro Met Ile 625 630 635
640 Thr Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys Asn Pro
645 650 655 Thr Tyr Leu Ile
Thr Arg Gln Leu Ala Asp Glu Pro His Tyr Thr His 660
665 670 Glu Leu Ile Ser Glu Pro Ala Val Arg
Asn Phe Thr Val Thr Glu Lys 675 680
685 Gly Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys Arg Phe
Trp Ala 690 695 700
Gln Glu Thr Ala Pro Gly Asn Pro His Gly Leu Pro His Glu Val Ile 705
710 715 720 Thr His Tyr Tyr His
Arg Tyr Pro Met Ser Thr Ile Leu Gly Leu Ser 725
730 735 Ile Cys Ala Ala Ile Ala Thr Val Ser Val
Ala Ala Ser Thr Trp Leu 740 745
750 Phe Cys Arg Ser Arg Val Ala Cys Leu Thr Pro Tyr Arg Leu Thr
Pro 755 760 765 Asn
Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala Arg Thr 770
775 780 Ala Arg Ala Glu Thr Thr
Trp Glu Ser Leu Asp His Leu Trp Asn Asn 785 790
795 800 Asn Gln Gln Met Phe Trp Ile Gln Leu Leu Ile
Pro Leu Ala Ala Leu 805 810
815 Ile Val Val Thr Arg Leu Leu Arg Cys Val Cys Cys Val Val Pro Phe
820 825 830 Leu Val
Met Ala Gly Ala Ala Gly Ala Gly Ala Tyr Glu His Ala Thr 835
840 845 Thr Met Pro Ser Gln Ala Gly
Ile Ser Tyr Asn Thr Ile Val Asn Arg 850 855
860 Ala Gly Tyr Ala Pro Leu Pro Ile Ser Ile Thr Pro
Thr Lys Ile Lys 865 870 875
880 Leu Ile Pro Thr Val Asn Leu Glu Tyr Val Thr Cys His Tyr Lys Thr
885 890 895 Gly Met Asp
Ser Pro Ala Ile Lys Cys Cys Gly Ser Gln Glu Cys Thr 900
905 910 Pro Thr Tyr Arg Pro Asp Glu Gln
Cys Lys Val Phe Thr Gly Val Tyr 915 920
925 Pro Phe Met Trp Gly Gly Ala Tyr Cys Phe Cys Asp Thr
Glu Asn Thr 930 935 940
Gln Val Ser Lys Ala Tyr Val Met Lys Ser Asp Asp Cys Leu Ala Asp 945
950 955 960 His Ala Glu Ala
Tyr Lys Ala His Thr Ala Ser Val Gln Ala Phe Leu 965
970 975 Asn Ile Thr Val Gly Glu His Ser Ile
Val Thr Thr Val Tyr Val Asn 980 985
990 Gly Glu Thr Pro Val Asn Phe Asn Gly Val Lys Ile Thr
Ala Gly Pro 995 1000 1005
Leu Ser Thr Ala Trp Thr Pro Phe Asp Arg Lys Ile Val Gln Tyr
1010 1015 1020 Ala Gly Glu
Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr Gly Ala Gly 1025
1030 1035 Gln Pro Gly Ala Phe Gly Asp Ile
Gln Ser Arg Thr Val Ser Ser 1040 1045
1050 Ser Asp Leu Tyr Ala Asn Thr Asn Leu Val Leu Gln Arg
Pro Lys 1055 1060 1065
Ala Gly Ala Ile His Val Pro Tyr Thr Gln Ala Pro Ser Gly Phe 1070
1075 1080 Glu Gln Trp Lys Lys
Asp Lys Ala Pro Ser Leu Lys Phe Thr Ala 1085 1090
1095 Pro Phe Gly Cys Glu Ile Tyr Thr Asn Pro
Ile Arg Ala Glu Asn 1100 1105 1110
Cys Ala Val Gly Ser Ile Pro Leu Ala Phe Asp Ile Pro Asp Ala
1115 1120 1125 Leu Phe
Thr Arg Val Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu 1130
1135 1140 Cys Thr Leu Asn Glu Cys Val
Tyr Ser Ser Asp Phe Gly Gly Ile 1145 1150
1155 Ala Thr Val Lys Tyr Ser Ala Ser Lys Ser Gly Lys
Cys Ala Val 1160 1165 1170
His Val Pro Ser Gly Thr Ala Thr Leu Lys Glu Ala Ala Val Glu 1175
1180 1185 Leu Thr Glu Gln Gly
Ser Ala Thr Ile His Phe Ser Thr Ala Asn 1190 1195
1200 Ile His Pro Glu Phe Arg Leu Gln Ile Cys
Thr Ser Tyr Val Thr 1205 1210 1215
Cys Lys Gly Asp Cys His Pro Pro Lys Asp His Ile Val Thr His
1220 1225 1230 Pro Gln
Tyr His Ala Gln Thr Phe Thr Ala Ala Val Ser Lys Thr 1235
1240 1245 Ala Trp Thr Trp Leu Thr Ser
Leu Leu Gly Gly Ser Ala Val Ile 1250 1255
1260 Ile Ile Ile Gly Leu Val Leu Ala Thr Ile Val Ala
Met Tyr Val 1265 1270 1275
Leu Thr Asn Gln Lys His Asn 1280 1285
4420PRTPlasmodium falciparum 44Glu Tyr Leu Asn Lys Ile Gln Asn Ser Leu
Ser Thr Glu Trp Ser Pro 1 5 10
15 Cys Ser Val Thr 20 4520PRTPlasmodium yoelii
45Tyr Asn Arg Asn Ile Val Asn Arg Leu Leu Gly Asp Ala Leu Asn Gly 1
5 10 15 Pro Glu Glu Lys
20 4630PRTArtificial SequenceSynthetic VLP74 insert 46Ser Gly
Gly Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 1 5
10 15 Pro Asn Ala Asn Pro Asn Ala
Asn Pro Asn Ala Gly Gly Ser 20 25
30 4790DNAArtificial SequenceSynthetic VLP74 insert 47tccggaggaa
acccgaatgc caatcccaac gcgaacccca atgctaaccc aaatgccaac 60ccaaacgcca
accccaacgc tggtggatcc
9048106PRTArtificial SequenceSynthetic VLP78 insert 48Ser Gly Gly Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 1 5
10 15 Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Val Asp Pro Asn Ala Asn 20 25
30 Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala
Asn 35 40 45 Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 50
55 60 Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 65 70
75 80 Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala
Asn Pro Asn Ala Asn 85 90
95 Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser 100
105 49318DNAArtificial SequenceSynthetic VLP74 insert
49tccggaggaa acccgaatgc caatcccaac gcgaacccca acgctaaccc caacgccaat
60ccgaatgcaa acccgaacgt tgacccaaac gccaacccga atgccaatcc caacgcgaac
120cccaatgcta acccaaatgc caacccaaac gccaacccca acgctaatcc aaacgccaac
180cctaacgcca atcccaacgc gaatcctaac gctaatccca acgcaaatcc caatgctaat
240ccgaacgcga accctaatgc aaaccccaac gccaacccga acgctaaccc gaacgctaat
300cccaacgccg gtggatcc
31850452PRTArtificial SequenceSynthetic CHIKV E2-74 fusion protein 50Ser
Thr Lys Asp Asn Phe Asn Val Tyr Lys Ala Thr Arg Pro Tyr Leu 1
5 10 15 Ala His Cys Pro Asp Cys
Gly Glu Gly His Ser Cys His Ser Pro Ile 20
25 30 Ala Leu Glu Arg Ile Arg Asn Glu Ala Thr
Asp Gly Thr Leu Lys Ile 35 40
45 Gln Val Ser Leu Gln Ile Gly Ile Lys Thr Asp Asp Ser His
Asp Trp 50 55 60
Thr Lys Leu Arg Tyr Met Asp Ser His Thr Pro Ala Asp Ala Glu Arg 65
70 75 80 Ala Gly Leu Leu Val
Arg Thr Ser Ala Pro Cys Thr Ile Thr Gly Thr 85
90 95 Met Gly His Phe Ile Leu Ala Arg Cys Pro
Lys Gly Glu Thr Leu Thr 100 105
110 Val Gly Phe Thr Asp Ser Arg Lys Ile Ser His Thr Cys Thr His
Pro 115 120 125 Phe
His His Glu Pro Pro Val Ile Gly Arg Glu Arg Phe His Ser Arg 130
135 140 Pro Gln His Gly Lys Glu
Leu Pro Cys Ser Thr Tyr Val Gln Ser Thr 145 150
155 160 Ala Ala Thr Ala Glu Glu Ile Glu Val His Met
Pro Pro Asp Thr Pro 165 170
175 Asp Arg Thr Leu Met Thr Gln Gln Ser Gly Asn Val Lys Ile Thr Val
180 185 190 Asn Gly
Gln Thr Val Arg Tyr Lys Cys Asn Cys Gly Gly Ser Gly Gly 195
200 205 Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala 210 215
220 Asn Pro Asn Ala Asn Pro Asn Ala Gly Gly Ser Asn
Glu Gly Leu Thr 225 230 235
240 Thr Thr Asp Lys Val Ile Asn Asn Cys Lys Ile Asp Gln Cys His Ala
245 250 255 Ala Val Thr
Asn His Lys Asn Trp Gln Tyr Asn Ser Pro Leu Val Pro 260
265 270 Arg Asn Ala Glu Leu Gly Asp Arg
Lys Gly Lys Ile His Ile Pro Phe 275 280
285 Pro Leu Ala Asn Val Thr Cys Arg Val Pro Lys Ala Arg
Asn Pro Thr 290 295 300
Val Thr Tyr Gly Lys Asn Gln Val Thr Met Leu Leu Tyr Pro Asp His 305
310 315 320 Pro Thr Leu Leu
Ser Tyr Arg Asn Met Gly Gln Glu Pro Asn Tyr His 325
330 335 Glu Glu Trp Val Thr His Lys Lys Glu
Val Thr Leu Thr Val Pro Thr 340 345
350 Glu Gly Leu Glu Val Thr Trp Gly Asn Asn Glu Pro Tyr Lys
Tyr Trp 355 360 365
Pro Gln Met Ser Thr Asn Gly Thr Ala His Gly His Pro His Glu Ile 370
375 380 Ile Leu Tyr Tyr Tyr
Glu Leu Tyr Pro Thr Met Thr Val Val Ile Val 385 390
395 400 Ser Val Ala Ser Phe Val Leu Leu Ser Met
Val Gly Thr Ala Val Gly 405 410
415 Met Cys Val Cys Ala Arg Arg Arg Cys Ile Thr Pro Tyr Glu Leu
Thr 420 425 430 Pro
Gly Ala Thr Val Pro Phe Leu Leu Ser Leu Leu Cys Cys Val Arg 435
440 445 Thr Thr Lys Ala 450
51439PRTArtificial SequenceSynthetic CHIKV E1 51Tyr Glu His Val
Thr Val Ile Pro Asn Thr Val Gly Val Pro Tyr Lys 1 5
10 15 Thr Leu Val Asn Arg Pro Gly Tyr Ser
Pro Met Val Leu Glu Met Glu 20 25
30 Leu Gln Ser Val Thr Leu Glu Pro Thr Leu Ser Leu Asp Tyr
Ile Thr 35 40 45
Cys Glu Tyr Lys Thr Val Ile Pro Ser Pro Tyr Val Lys Cys Cys Gly 50
55 60 Thr Ala Glu Cys Lys
Asp Lys Ser Leu Pro Asp Tyr Ser Cys Lys Val 65 70
75 80 Phe Thr Gly Val Tyr Pro Phe Met Trp Gly
Gly Ala Tyr Cys Phe Cys 85 90
95 Asp Ala Glu Asn Thr Gln Leu Ser Glu Ala His Val Glu Lys Ser
Glu 100 105 110 Ser
Cys Lys Thr Glu Phe Ala Ser Ala Tyr Arg Ala His Thr Ala Ser 115
120 125 Ala Ser Ala Lys Leu Arg
Val Leu Tyr Gln Gly Asn Asn Ile Thr Val 130 135
140 Ala Ala Tyr Ala Asn Gly Asp His Ala Val Thr
Val Lys Asp Ala Lys 145 150 155
160 Phe Val Val Gly Pro Met Ser Ser Ala Trp Thr Pro Phe Asp Asn Lys
165 170 175 Ile Val
Val Tyr Lys Gly Asp Val Tyr Asn Met Asp Tyr Pro Pro Phe 180
185 190 Gly Ala Gly Arg Pro Gly Gln
Phe Gly Asp Ile Gln Ser Arg Thr Pro 195 200
205 Glu Ser Lys Asp Val Tyr Ala Asn Thr Gln Leu Val
Leu Gln Arg Pro 210 215 220
Ala Ala Gly Thr Val His Val Pro Tyr Ser Gln Ala Pro Ser Gly Phe 225
230 235 240 Lys Tyr Trp
Leu Lys Glu Arg Gly Ala Ser Leu Gln His Thr Ala Pro 245
250 255 Phe Gly Cys Gln Ile Ala Thr Asn
Pro Val Arg Ala Val Asn Cys Ala 260 265
270 Val Gly Asn Ile Pro Ile Ser Ile Asp Ile Pro Asp Ala
Ala Phe Thr 275 280 285
Arg Val Val Asp Ala Pro Ser Val Thr Asp Met Ser Cys Glu Val Pro 290
295 300 Ala Cys Thr His
Ser Ser Asp Phe Gly Gly Val Ala Ile Ile Lys Tyr 305 310
315 320 Thr Ala Ser Lys Lys Gly Lys Cys Ala
Val His Ser Met Thr Asn Ala 325 330
335 Val Thr Ile Arg Glu Ala Asp Val Glu Val Glu Gly Asn Ser
Gln Leu 340 345 350
Gln Ile Ser Phe Ser Thr Ala Leu Ala Ser Ala Glu Phe Arg Val Gln
355 360 365 Val Cys Ser Thr
Gln Val His Cys Ala Ala Ala Cys His Pro Pro Lys 370
375 380 Asp His Ile Val Asn Tyr Pro Ala
Ser His Thr Thr Leu Gly Val Gln 385 390
395 400 Asp Ile Ser Thr Thr Ala Met Ser Trp Val Gln Lys
Ile Thr Gly Gly 405 410
415 Val Gly Leu Ile Val Ala Val Ala Ala Leu Ile Leu Ile Val Val Leu
420 425 430 Cys Val Ser
Phe Ser Arg His 435 52261PRTArtificial
SequenceSynthetic CHIKV capsid 52Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr
Asn Arg Arg Tyr Gln Pro 1 5 10
15 Arg Pro Trp Ala Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg
Pro 20 25 30 Arg
Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val 35
40 45 Asn Lys Leu Thr Met Arg
Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 50 55
60 Arg Lys Asn Lys Lys Gln Arg Gln Lys Lys Gln
Ala Pro Gln Asn Asp 65 70 75
80 Pro Lys Gln Lys Lys Gln Pro Pro Gln Lys Lys Pro Ala Gln Lys Lys
85 90 95 Lys Lys
Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp 100
105 110 Cys Ile Phe Glu Val Lys His
Glu Gly Lys Val Met Gly Tyr Ala Cys 115 120
125 Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val
Lys Gly Thr Ile 130 135 140
Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr 145
150 155 160 Asp Leu Glu
Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser 165
170 175 Lys Phe Thr His Glu Lys Pro Glu
Gly Tyr Tyr Asn Trp His His Gly 180 185
190 Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr
Gly Ala Gly 195 200 205
Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 210
215 220 Val Ala Ile Val
Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 225 230
235 240 Ser Val Val Thr Trp Asn Lys Asp Ile
Val Thr Lys Ile Thr Pro Glu 245 250
255 Gly Ala Glu Glu Trp 260
53453PRTArtificial SequenceSynthetic VEEV E2-74 fusion protein 53Ser Thr
Glu Glu Leu Phe Asn Glu Tyr Lys Leu Thr Arg Pro Tyr Met 1 5
10 15 Ala Arg Cys Ile Arg Cys Ala
Val Gly Ser Cys His Ser Pro Ile Ala 20 25
30 Ile Glu Ala Val Lys Ser Asp Gly His Asp Gly Tyr
Val Arg Leu Gln 35 40 45
Thr Ser Ser Gln Tyr Gly Leu Asp Ser Ser Gly Asn Leu Lys Gly Arg
50 55 60 Thr Met Arg
Tyr Asp Met His Gly Thr Ile Lys Glu Ile Pro Leu His 65
70 75 80 Gln Val Ser Leu Tyr Thr Ser
Arg Pro Cys His Ile Val Asp Gly His 85
90 95 Gly Tyr Phe Leu Leu Ala Arg Cys Pro Ala Gly
Asp Ser Ile Thr Met 100 105
110 Glu Phe Lys Lys Asp Ser Val Arg His Ser Cys Ser Val Pro Tyr
Glu 115 120 125 Val
Lys Phe Asn Pro Val Gly Arg Glu Leu Tyr Thr His Pro Pro Glu 130
135 140 His Gly Val Glu Gln Ala
Cys Gln Val Tyr Ala His Asp Ala Gln Asn 145 150
155 160 Arg Gly Ala Tyr Val Glu Met His Leu Pro Gly
Ser Glu Val Asp Ser 165 170
175 Ser Leu Val Ser Leu Ser Gly Ser Ser Gly Gly Asn Pro Asn Ala Asn
180 185 190 Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn 195
200 205 Pro Asn Ala Gly Gly Ser Ser
Val Thr Val Thr Pro Pro Asp Gly Thr 210 215
220 Ser Ala Leu Val Glu Cys Glu Cys Gly Gly Thr Lys
Ile Ser Glu Thr 225 230 235
240 Ile Asn Lys Thr Lys Gln Phe Ser Gln Cys Thr Lys Lys Glu Gln Cys
245 250 255 Arg Ala Tyr
Arg Leu Gln Asn Asp Lys Trp Val Tyr Asn Ser Asp Lys 260
265 270 Leu Pro Lys Ala Ala Gly Ala Thr
Leu Lys Gly Lys Leu His Val Pro 275 280
285 Phe Leu Leu Ala Asp Gly Lys Cys Thr Val Pro Leu Ala
Pro Glu Pro 290 295 300
Met Ile Thr Phe Gly Phe Arg Ser Val Ser Leu Lys Leu His Pro Lys 305
310 315 320 Asn Pro Thr Tyr
Leu Ile Thr Arg Gln Leu Ala Asp Glu Pro His Tyr 325
330 335 Thr His Glu Leu Ile Ser Glu Pro Ala
Val Arg Asn Phe Thr Val Thr 340 345
350 Glu Lys Gly Trp Glu Phe Val Trp Gly Asn His Pro Pro Lys
Arg Phe 355 360 365
Trp Ala Gln Glu Thr Ala Pro Gly Asn Pro His Gly Leu Pro His Glu 370
375 380 Val Ile Thr His Tyr
Tyr His Arg Tyr Pro Met Ser Thr Ile Leu Gly 385 390
395 400 Leu Ser Ile Cys Ala Ala Ile Ala Thr Val
Ser Val Ala Ala Ser Thr 405 410
415 Trp Leu Phe Cys Arg Ser Arg Val Ala Cys Leu Thr Pro Tyr Arg
Leu 420 425 430 Thr
Pro Asn Ala Arg Ile Pro Phe Cys Leu Ala Val Leu Cys Cys Ala 435
440 445 Arg Thr Ala Arg Ala
450 54442PRTArtificial SequenceSynthetic VEEV E1 54Tyr Glu
His Ala Thr Thr Met Pro Ser Gln Ala Gly Ile Ser Tyr Asn 1 5
10 15 Thr Ile Val Asn Arg Ala Gly
Tyr Ala Pro Leu Pro Ile Ser Ile Thr 20 25
30 Pro Thr Lys Ile Lys Leu Ile Pro Thr Val Asn Leu
Glu Tyr Val Thr 35 40 45
Cys His Tyr Lys Thr Gly Met Asp Ser Pro Ala Ile Lys Cys Cys Gly
50 55 60 Ser Gln Glu
Cys Thr Pro Thr Tyr Arg Pro Asp Glu Gln Cys Lys Val 65
70 75 80 Phe Thr Gly Val Tyr Pro Phe
Met Trp Gly Gly Ala Tyr Cys Phe Cys 85
90 95 Asp Thr Glu Asn Thr Gln Val Ser Lys Ala Tyr
Val Met Lys Ser Asp 100 105
110 Asp Cys Leu Ala Asp His Ala Glu Ala Tyr Lys Ala His Thr Ala
Ser 115 120 125 Val
Gln Ala Phe Leu Asn Ile Thr Val Gly Glu His Ser Ile Val Thr 130
135 140 Thr Val Tyr Val Asn Gly
Glu Thr Pro Val Asn Phe Asn Gly Val Lys 145 150
155 160 Ile Thr Ala Gly Pro Leu Ser Thr Ala Trp Thr
Pro Phe Asp Arg Lys 165 170
175 Ile Val Gln Tyr Ala Gly Glu Ile Tyr Asn Tyr Asp Phe Pro Glu Tyr
180 185 190 Gly Ala
Gly Gln Pro Gly Ala Phe Gly Asp Ile Gln Ser Arg Thr Val 195
200 205 Ser Ser Ser Asp Leu Tyr Ala
Asn Thr Asn Leu Val Leu Gln Arg Pro 210 215
220 Lys Ala Gly Ala Ile His Val Pro Tyr Thr Gln Ala
Pro Ser Gly Phe 225 230 235
240 Glu Gln Trp Lys Lys Asp Lys Ala Pro Ser Leu Lys Phe Thr Ala Pro
245 250 255 Phe Gly Cys
Glu Ile Tyr Thr Asn Pro Ile Arg Ala Glu Asn Cys Ala 260
265 270 Val Gly Ser Ile Pro Leu Ala Phe
Asp Ile Pro Asp Ala Leu Phe Thr 275 280
285 Arg Val Ser Glu Thr Pro Thr Leu Ser Ala Ala Glu Cys
Thr Leu Asn 290 295 300
Glu Cys Val Tyr Ser Ser Asp Phe Gly Gly Ile Ala Thr Val Lys Tyr 305
310 315 320 Ser Ala Ser Lys
Ser Gly Lys Cys Ala Val His Val Pro Ser Gly Thr 325
330 335 Ala Thr Leu Lys Glu Ala Ala Val Glu
Leu Thr Glu Gln Gly Ser Ala 340 345
350 Thr Ile His Phe Ser Thr Ala Asn Ile His Pro Glu Phe Arg
Leu Gln 355 360 365
Ile Cys Thr Ser Tyr Val Thr Cys Lys Gly Asp Cys His Pro Pro Lys 370
375 380 Asp His Ile Val Thr
His Pro Gln Tyr His Ala Gln Thr Phe Thr Ala 385 390
395 400 Ala Val Ser Lys Thr Ala Trp Thr Trp Leu
Thr Ser Leu Leu Gly Gly 405 410
415 Ser Ala Val Ile Ile Ile Ile Gly Leu Val Leu Ala Thr Ile Val
Ala 420 425 430 Met
Tyr Val Leu Thr Asn Gln Lys His Asn 435 440
55275PRTArtificial SequenceSynthetic VEEV Capsid 55Met Phe Pro Phe Gln
Pro Met Tyr Pro Met Gln Pro Met Pro Tyr Arg 1 5
10 15 Asn Pro Phe Ala Ala Pro Arg Arg Pro Trp
Phe Pro Arg Thr Asp Pro 20 25
30 Phe Leu Ala Met Gln Val Gln Glu Leu Thr Arg Ser Met Ala Asn
Leu 35 40 45 Thr
Phe Lys Gln Arg Arg Asp Ala Pro Pro Glu Gly Pro Ser Ala Asn 50
55 60 Lys Pro Lys Lys Glu Ala
Ser Gln Lys Gln Lys Gly Gly Gly Gln Gly 65 70
75 80 Lys Lys Lys Lys Asn Gln Gly Lys Lys Lys Ala
Lys Thr Gly Pro Pro 85 90
95 Asn Pro Lys Ala Gln Asn Gly Asn Lys Lys Lys Thr Asn Lys Lys Pro
100 105 110 Gly Lys
Arg Gln Arg Met Val Met Lys Leu Glu Ser Asp Lys Thr Phe 115
120 125 Pro Ile Met Leu Glu Gly Lys
Ile Asn Gly Tyr Ala Cys Val Val Gly 130 135
140 Gly Lys Leu Phe Arg Pro Met His Val Glu Gly Lys
Ile Asp Asn Asp 145 150 155
160 Val Leu Ala Ala Leu Lys Thr Lys Lys Ala Ser Lys Tyr Asp Leu Glu
165 170 175 Tyr Ala Asp
Val Pro Gln Asn Met Arg Ala Asp Thr Phe Lys Tyr Thr 180
185 190 His Glu Lys Pro Gln Gly Tyr Tyr
Ser Trp His His Gly Ala Val Gln 195 200
205 Tyr Glu Asn Gly Arg Phe Thr Val Pro Lys Gly Val Gly
Ala Lys Gly 210 215 220
Asp Ser Gly Arg Pro Ile Leu Asp Asn Gln Gly Arg Val Val Ala Ile 225
230 235 240 Val Leu Gly Gly
Val Asn Glu Gly Ser Arg Thr Ala Leu Ser Val Val 245
250 255 Met Trp Asn Glu Lys Gly Val Thr Val
Lys Tyr Thr Pro Glu Asn Cys 260 265
270 Glu Gln Trp 275 56414PRTPlasmodium falciparum
56Met Met Arg Lys Leu Ala Ile Leu Ser Val Ser Ser Phe Leu Phe Val 1
5 10 15 Glu Ala Leu Phe
Gln Glu Tyr Gln Cys Tyr Gly Ser Ser Ser Asn Thr 20
25 30 Arg Val Leu Asn Glu Leu Asn Tyr Asp
Asn Ala Gly Thr Asn Leu Tyr 35 40
45 Asn Glu Leu Glu Met Asn Tyr Tyr Gly Lys Gln Glu Asn Trp
Tyr Ser 50 55 60
Leu Lys Lys Asn Ser Arg Ser Leu Gly Glu Asn Asp Asp Gly Asn Asn 65
70 75 80 Asn Asn Gly Asp Asn
Gly Arg Glu Gly Lys Asp Glu Asp Lys Arg Asp 85
90 95 Gly Asn Asn Glu Asp Asn Glu Lys Leu Arg
Lys Pro Lys His Lys Lys 100 105
110 Leu Lys Gln Pro Gly Asp Gly Asn Pro Asp Pro Asn Ala Asn Pro
Asn 115 120 125 Val
Asp Pro Asn Ala Asn Pro Asn Val Asp Pro Asn Ala Asn Pro Asn 130
135 140 Val Asp Pro Asn Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 145 150
155 160 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro
Asn Ala Asn Pro Asn 165 170
175 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
180 185 190 Ala Asn
Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 195
200 205 Val Asp Pro Asn Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn 210 215
220 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn 225 230 235
240 Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn
245 250 255 Ala Asn Pro
Asn Ala Asn Pro Asn Ala Asn Pro Asn Ala Asn Pro Asn 260
265 270 Ala Asn Pro Asn Ala Asn Pro Asn
Ala Asn Pro Asn Ala Asn Pro Asn 275 280
285 Lys Asn Asn Gln Gly Asn Gly Gln Gly His Asn Met Pro
Asn Asp Pro 290 295 300
Asn Arg Asn Val Asp Glu Asn Ala Asn Ala Asn Asn Ala Val Lys Asn 305
310 315 320 Asn Asn Asn Glu
Glu Pro Ser Asp Lys His Ile Glu Gln Tyr Leu Lys 325
330 335 Lys Ile Lys Asn Ser Ile Ser Thr Glu
Trp Ser Pro Cys Ser Val Thr 340 345
350 Cys Gly Asn Gly Ile Gln Val Arg Ile Lys Pro Gly Ser Ala
Asn Lys 355 360 365
Pro Lys Asp Glu Leu Asp Tyr Glu Asn Asp Ile Glu Lys Lys Ile Cys 370
375 380 Lys Met Glu Lys Cys
Ser Ser Val Phe Asn Val Val Asn Ser Ser Ile 385 390
395 400 Gly Leu Ile Met Val Leu Ser Phe Leu Phe
Leu Asn Thr Arg 405 410
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