Patent application title: AGENTS, METHODS AND KITS FOR TREATING AND DETECTING DIABETIC NEPHROPATHY AND PROLIFERATIVE DISEASES AND METHODS FOR INHIBITING EXPRESSION OF TYPE IV COLLAGEN
Inventors:
Toshio Doi (Kyoto, JP)
Toshio Doi (Kyoto-Shi, JP)
Hideharu Abe (Tokushima, JP)
Assignees:
HUBIT GENOMIX, INC
IPC8 Class: AC12Q168FI
USPC Class:
1 1
Class name:
Publication date: 2016-11-17
Patent application number: 20160333412
Abstract:
A method of detecting proliferative diseases causing sclerosis,
comprising measuring the expression of at least one substance selected
from the group consisting of STAT3, phosphorylated STAT3, Smad1,
phosphorylated Smad1, activin receptor-like kinase 1, activin
receptor-like kinase 3 and bone morphogenetic proteins in a biological
sample. A kit therefor. A prophylactic and/or therapeutic agent for
proliferative diseases causing sclerosis, comprising as an active
ingredient a substance having an inhibitory effect on the expression of
at least one substance selected from the group consisting of STAT3,
phosphorylated STAT3, Smad1 and phosphorylated Smad1. A method of
identifying substances effective in preventing and/or treating
proliferative diseases causing sclerosis, comprising judging whether or
not a test substance inhibits the expression of at least one substance
selected from the group consisting of STAT3, phosphorylated STAT3, Smad1
and phosphorylated Smad1. A kit therefor.Claims:
1. A method of detecting and treating diabetic nephropathy, which method
comprises: contacting a biological sample from a subject with a pair of
primers that amplify Smad1 and/or a substance having Smad1-activating
effect; detecting the presence or absence of expression of Smad1 and/or a
substance having Smad1-activating effect in the biological sample from
the subject; identifying the subject as having diabetic nephropathy if
the presence of the expression of Smad1 and/or the substance having
Smad1-activating effect is detected; administering to the subject a drug
comprising a substance having an inhibitory effect on the expression of
Smad1, wherein the substance having Smad1-activating effect is selected
from the group consisting of activin receptor-like kinase 1 (ALK1),
activin receptor-like kinase 3 (ALK3) and bone morphogenetic protein
BMP2.
2. A method of evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy, which method comprises: measuring the expression level of Smad1 and/or a substance having Smad1-activating effect in a first biological sample from a subject at a first time point by contacting the first biological sample with a pair of primers that amplify Smad1 and/or a substance having Smad1-activating effect; administering to the subject a drug comprising a substance having an inhibitory effect on the expression of Smad1; measuring the expression level of Smad1 and/or the substance having Smad1-activating effect in a second biological sample from the subject at a second time point by contacting the second biological sample with a pair of primers that amplify Smad1 and/or a substance having Smad1-activating effect; comparing the expression level of Smad1 and/or a substance having Smad1-activating effect from the first and second biological sample, wherein an increase in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates progression of diabetic nephropathy, and wherein a decrease in the expression of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the diabetic nephropathy has not progressed, wherein the substance having Smad1-activating effect is selected from the group consisting of activin receptor-like kinase 1 (ALK1), activin receptor-like kinase 3 (ALK3) and bone morphogenetic protein BMP2, and wherein an increase in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the treatment of diabetic nephropathy is not effective, wherein a decrease in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the treatment of diabetic nephropathy is effective.
3. A kit for detecting diabetic nephropathy, comprising a reagent(s) for measuring the expression of Smad1 and/or a substance having Smad1-activating effect.
4. A kit for evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy, comprising a reagent(s) for measuring the expression of Smad1 and/or a substance having Smad1-activating effect.
5. A prophylactic and/or therapeutic agent for proliferative diseases causing sclerosis, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
6. A drug inhibiting the increase of extracellular matrix, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
7. A drug inhibiting the expression of .alpha.1 type IV collagen, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
8. A method for producing a prophylactic and/or therapeutic effect on proliferative diseases causing sclerosis, comprising administering to a subject a drug including a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
9. A method of inhibiting an increase of extracellular matrix, comprising providing to a sample a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
10. A method of inhibiting an expression of .alpha.1 type IV collagen, comprising administering to a subject a drug including a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
11. A method of inhibiting an expression of .alpha.1 type IV collagen, comprising providing to a sample a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
12. A method of claim 8, wherein the substance to be administered includes antisense oligonucleotides to Smad1, Smad1 Antagonistic Effector, an anti-PDGF .beta. receptor antibody, or antisense oligonucleotides to STAT3.
13. A method of claim 8, wherein the substance to be administered has a sequence comprising SEQ ID NO: 13.
14. The method according to claim 2, wherein the first time point is before treatment and the second time point is after treatment.
15. The method according to claim 1, wherein the biological sample is selected from the group consisting of renal tissue sections, blood, sera, and urine.
16. The method of claim 2, wherein the biological sample is selected from the group consisting of renal tissue sections, blood, sera and urine.
17. The method according to claim 1, wherein detection of expression is determined at the nucleic acid level or the protein level.
18. The method according to claim 2, wherein the level of expression is measured at the nucleic acid level or the protein level.
19. The method according to claim 1, wherein the presence or absence of Smad1 expression is detected.
20. The method according to claim 2, wherein the expression of Smad1 is measured.
21. A method of evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy and treating a subject, which method comprises: measuring the expression level of Smad1 and/or a substance having Smad1-activating effect in a first biological sample from a subject at a first time point; administering to the subject a drug comprising a substance having an inhibitory effect on the expression of Smad1; measuring the expression level of Smad1 and/or the substance having Smad1-activating effect in a second biological sample from the subject at a second time point; comparing the expression level of Smad1 and/or a substance having Smad1-activating effect from the first and second biological sample, wherein an increase in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates progression of diabetic nephropathy, and wherein a decrease in the expression of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the diabetic nephropathy has not progressed, wherein the substance having Smad1-activating effect is selected from the group consisting of activin receptor-like kinase 1 (ALK1), activin receptor-like kinase 3 (ALK3) and bone morphogenetic protein BMP2, and wherein an increase in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the treatment of diabetic nephropathy is not effective, wherein a decrease in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the treatment of diabetic nephropathy is effective.
22. A method of detecting and treating diabetic nephropathy, which method comprises: detecting the presence of expression of Smad1 and/or a substance having Smad1-activating effect in a biological sample from a subject, identifying the subject as having diabetic nephropathy if the presence of the expression of Smad1 and/or the substance having Smad1-activating effect is detected, administering to the subject a drug comprising a substance having an inhibitory effect on the expression of Smad1, wherein the substance having Smad1-activating effect is selected from the group consisting of activin receptor-like kinase 1 (ALK1), activin receptor-like kinase 3 (ALK3) and bone morphogenetic protein BMP2.
23. The method according to claim 21, wherein the drug comprises an antisense oligonucleotide to Smad1.
24. The method according to claim 22, wherein the drug comprises an antisense oligonucleotide to Smad1.
25. A method of detecting diabetic nephropathy, which method comprises: contacting a biological sample from a subject with a pair of primers that amplify Smad1 and/or a substance having Smad1-activating effect; detecting the presence or absence of expression of Smad1 and/or a substance having Smad1-activating effect in the biological sample from the subject, identifying the subject as having diabetic nephropathy if the presence of the expression of Smad1 and/or the substance having Smad1-activating effect is detected, wherein the substance having Smad1-activating effect is selected from the group consisting of activin receptor-like kinase 1 (ALK1), activin receptor-like kinase 3 (ALK3) and bone morphogenetic protein BMP2, wherein the pair of primers are selected from the group consisting of SEQ ID NO: 5 and SEQ ID NO: 6; SEQ ID NO: 7 and SEQ ID NO: 8; SEQ ID NO: 9 and SEQ ID NO: 10; SEQ ID NO: 11 and SEQ ID NO: 12; and SEQ ID NO: 23 and SEQ ID NO: 24.
26. A method of evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy, which method comprises: measuring the expression level of Smad1 and/or a substance having Smad1-activating effect in a first biological sample from a subject at a first time point by contacting the first biological sample with a pair of primers that amplify Smad1 and/or a substance having Smad1-activating effect; measuring the expression level of Smad1 and/or the substance having Smad1-activating effect in a second biological sample from the subject at a second time point by contacting the second biological sample with a pair of primers that amplify Smad1 and/or a substance having Smad1-activating effect; comparing the expression level of Smad1 and/or a substance having Smad1-activating effect from the first and second biological sample; wherein an increase in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates progression of diabetic nephropathy, and wherein a decrease in the expression of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the diabetic nephropathy has not progressed, wherein the substance having Smad1-activating effect is selected from the group consisting of activin receptor-like kinase 1 (ALK1), activin receptor-like kinase 3 (ALK3) and bone morphogenetic protein BMP2, wherein an increase in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the treatment of diabetic nephropathy is not effective, wherein a decrease in the expression level of Smad1 and/or a substance having Smad1-activating effect in the second biological sample in comparison to the first biological sample indicates that the treatment of diabetic nephropathy is effective, and wherein the pair of primers are selected from the group consisting of SEQ ID NO: 5 and SEQ ID NO: 6; SEQ ID NO: 7 and SEQ ID NO: 8; SEQ ID NO: 9 and SEQ ID NO: 10; SEQ ID NO: 11 and SEQ ID NO: 12; and SEQ ID NO: 23 and SEQ ID NO: 24.
Description:
CROSS-REFERENCE TO RELATED APPLICATIONS
[0001] This application is a divisional of co-pending U.S. application Ser. No. 12/585,882, filed Sep. 28, 2009, which is a divisional of U.S. application Ser. No. 10/571,511, filed on Jan. 8, 2007 (now U.S. Pat. No. 7,901,874 B2). U.S. application Ser. No. 10/571,511 is a national phase of PCT International Application No. PCT/JP2004/013124 filed on Sep. 9, 2004. PCT International Application No. PCT/JP2004/013124 claims the benefit of priority of Japanese Application No. 2003-319538, filed on Sep. 11, 2003, under 35 U.S.C. .sctn.119. The contents of the above applications are each incorporated herein by reference in their entirety.
REFERENCE TO SEQUENCE LISTING SUBMITTED VIA EFS-WEB
[0002] This application includes an electronically submitted sequence listing in .txt format. The .txt file contains a sequence listing entitled "2016-04-18_Sequence_Listing_3749-0124PUS3.txt" created on Apr. 18, 2016 and is 80,000 bytes in size. The sequence listing contained in this .txt file is part of the specification and is hereby incorporated by reference herein in its entirety.
TECHNICAL FIELD
[0003] The present invention relates to a method of detecting proliferative diseases causing sclerosis and a kit therefor; a prophylactic and/or therapeutic agent for proliferative diseases causing sclerosis, as well as a method of identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis and a kit therefor.
BACKGROUND ART
[0004] .alpha.1 type IV collagen (Col4) is a major component of the vascular basement membrane that lies beneath the endothelium and surrounds medial smooth muscle cells, and the overproduction of Col4 plays a crucial role in the process of diabetic angiopathy, arteriosclerosis and aging-related diseases. Prolonged exposure to hyperglycemia is now recognized as a significant causal factor of diabetic complications (non-patent documents 1 and 2). Excessive advanced glycation end-products (AGEs) produced as a result of hyperglycemia are known to induce a variety of cellular events in vascular cells and other cells, possibly through several functional AGEs receptors, thereby modulating the disease processes (non-patent documents 3, 4 and 5). AGEs have been recently accepted as playing an important role, not only in diabetic complications, but also in arteriosclerosis caused by aging (non-patent documents 6 and 7). Moreover, a truncated, soluble form of the receptor for AGEs was reported to inhibit the progress of accelerated diabetic atherosclerosis (non-patent document 8).
[0005] Morphologically, the progress of diabetic nephropathy is characterized by progressive thickening of the glomerular basement membrane (GBM) and by expansion of the mesangial extracellular matrix (ECM). Since Col4 is a major component of the thickened GBM and expanded ECM, it is important to clarify how Col4 is regulated at the transcriptional level in the diabetic state. The 130-bp bidirectional promoter of Col4 contains a large stem-loop structure (CIV) which has been shown to interact with several DNA binding proteins (non-patent documents 9). Using a gel mobility shift assay, the present inventors previously reported that an unknown protein binds to the CIV site only when Col4 is induced by the exposure to AGEs (non-patent document 10).
[0006] Both mesangial cell proliferation and glomerulosclerosis are major pathological features in progressive glomerular disorders. The fact that mesangial cell proliferation is observed in many glomerular sclerosing diseases suggests that this process is important in progressive glomerular disorders (non-patent document 11 (A1), non-patent document 12 (A2)). Both events are concomitantly observed in most of glomerular diseases, but it is not clear how cell proliferation is involved in the progress of glomerulosclerosis.
[0007] Platelet derived growth factor (PDGF) was shown as a critical mitogen for mesangial cells in vitro and in vivo (non-patent document 13 (3A), non-patent document 14 (4A)). Not only in experimental models but also in human glomerular diseases, it has been proved that PDGF plays a key role in the progress of glomerulosclerosis (non-patent document 13 (A3)). PDGF-BB was also reported to be essential for mesangial cell proliferation (non-patent document 15(A5)), which is followed by development of glomerulosclerosis in a remnant kidney model (non-patent document 16 (A6)). Introduction of neutralizing anti-PDGF antibody markedly ameliorated both mesangial proliferation and glomerulosclerosis in a rat glomerulonephritis model (non-patent document 17 (A7)), but little was known about the mechanism how inhibition of cell proliferation reduces glomerular sclerotic lesions.
[0008] Non-patent document 1:
[0009] The Diabetes Control and Complications Trial Research Group. N. Engl. J. Med. 329, 977-986 (1993).
[0010] Non-patent document 2:
[0011] UK Prospective Diabetes Study (UKPDS) Group. Lancet 352, 837-853 (1998)
[0012] Non-patent document 3:
[0013] H. Vlassara, et al., Proc. Natl. Acad. Sci. USA 91, 11704-11708 (1994).
[0014] Non-patent document 4:
[0015] M. Brownlee, A. Cerami, H. Vlassara, N. Engl. J. Med. 318, 1315-1321 (1988).
[0016] Non-patent document 5:
[0017] T. Doi, et al., Proc. Natl. Acad. Sci. USA 89, 2873-2877 (1992).
[0018] Non-patent document 6:
[0019] H. Vlassara, et al., Proc. Natl. Acad. Sci. USA 89, 12043-12047 (1992).
[0020] Non-patent document 7:
[0021] M. S. Huijberts, et al., J. Clin. Invest. 92, 1407-1411 (1993).
[0022] Non-patent document 8:
[0023] S. L. Park, et al., Nature Med. 9, 1025-1031 (1998)
[0024] Non-patent document 9:
[0025] L. A. Bruggeman, P. D. Burbelo, Y. Yamada, P. E. Klotman, Oncogene 7, 1497-1502 (1992).
[0026] Non-patent document 10:
[0027] N. Iehara, H. Takeoka, Y. Yamada, T. Kita, T. Doi, Kidney Int. 50, 1166-1172 (1996).
[0028] Non-patent document 11:
[0029] Fogo A, Ichikawa I. Evidence for the central role of glomerular growth promoters in the development of sclerosis. Semin Nephrol. 1989 December; 9(4):329-42.
[0030] Non-patent document 12:
[0031] Striker L J, Doi T, Elliot S, Striker G E. The contribution of glomerular mesangial cells to progressive glomerulosclerosis. Semin Nephrol. 1989 December; 9(4):318-28. Review.
[0032] Non-patent document 13:
[0033] Floege J, Johnson R J: Multiple roles for platelet-derived growth factor in renal disease. Miner Electrolyte Metab 21: 271-282, 1995
[0034] Non-patent document 14:
[0035] Doi T, Vlassara H, Kirstein M, Yamada Y, Striker G E, Striker L J: Receptor-specific increase in extracellular matrix production by mesangial cells by advanced glycosylation end products is mediated via platelet-derived growth factor. Proc Natl Acad Sci USA 89: 2873-2877, 1992
[0036] Non-patent document 15:
[0037] Barnes J L, Hevey K A. Glomerular mesangial cell migration in response to platelet-derived growth factor. Lab Invest. 1990 March; 62(3):379-82.
[0038] Non-patent document 16:
[0039] Floege, J., Burns, M. W., Alpers, C. E., Yoshimura, A., Pritzl, P., Gordon, K., Seifert, R. A., Bowen-Pope, D. F., Couser, W. G., and Johnson, R. J.: Glomerular cell proliferation and PDGF expression precede glomerulosclerosis in the remnant kidney model. Kidney Int. 41: 297-309, 1992
[0040] Non-patent document 17:
[0041] Johnson, R. J., Raines, E. W., Floege, J, et al: Inhibition of mesangial cell proliferation and matrix expansion in glomerulonephritis in the rat by antibody to platelet-derived growth factor. J Exp Med 175: 1413-1416, 1992
DISCLOSURE OF THE INVENTION
Problem for Solution by the Invention
[0042] Diabetic nephropathy is the leading cause of end-stage renal failure. Type IV collagen is a principal component of the vascular basement membrane and the mesangial matrix of renal glomeruli, and plays a crucial role in the process of diabetic anigiopathy. However, what is directly involved in the overproduction of type IV collagen in diabetic state is unknown. It is an object of the present invention to identify the substance that is directly involved in the overproduction of type IV collagen and to demonstrate that the substance plays a critical role as a causative of diabetic nephropathy. It is another object of the present invention to provide a method and a kit for detecting diabetic nephropathy using the substance that is directly involved in the overproduction of type IV collagen. It is still another object of the invention to provide uses of those substances having an inhibitory effect on the expression of the substance that is directly involved in the overproduction of type IV collagen. It is still another object of the invention to provide a method and a kit for identifying substances effective in preventing and/or treating diabetic nephropathy; a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix; and a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen.
[0043] Further, the present invention aims at demonstrating the effect of administration of anti-PDGF .beta. receptor antibody (APB5) (which inhibits activation by PDGF-B chain) on rat glomerulonephritis to thereby demonstrate in vivo and in vitro that the PDGF signal transduction pathway is regulating both glomerular cell proliferation and glomerulosclerosis. The present invention also aims at providing a method and a kit for detecting proliferative diseases causing sclerosis, using those substances involved in glomerular cell proliferation and glomerulosclerosis. Further, the present invention aims at providing uses of substances which have an inhibitory effect on the expression of those substances involved in glomerular cell proliferation and glomerulosclerosis. Still further, the present invention aims at providing a method and a kit for identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis; a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix; and a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen.
Means to Solve the Problem
[0044] The present inventors have identified Smad1 as a substance that is directly involved in the overproduction of type IV collagen and demonstrated that Smad1 plays a critical role as a causative of diabetic nephropathy. The present inventors have also examined the expression of Smad1 and activin receptor-like kinase 1 (ALK1) in renal glomeruli of healthy persons and diabetic nephropathy patients, and found that while the expression of Smad1 and ALK1 in diabetic nephropathy patients is proportional to the severity of sclerosis lesions, the expression of Smad1 and ALK1 is hardly observed in healthy persons. Further, the present inventors have also found that the expression of BMP2 and BMP4 (which regulate the expression of Smad1) increases in the presence of AGEs stimulation.
[0045] On the other hand, the fact that mesangial cell proliferation is observed in many glomerul sclerosing diseases suggests that this process is important in progressive glomerular disorders. However, relations between the cell proliferation and glomerulosclerosis are not clear. Recently, the present inventors showed that the overexpression of type IV collagen (Col4), one of major components of glomerulosclerosis, is transcriptionally regulated by Smad1 in diabetic glomerulosclerosis. In this study, the present inventors have demonstrated the effect of administration of anti-PDGF .beta.-receptor antibody (APB5) (which inhibits activation by PDGF-B chain) on rat glomerulonephritis and thereby demonstrated in vivo and in vitro that the PDGF signal transduction pathway is regulating both glomerular cell proliferation and glomerulosclerosis.
[0046] An experimental model of mesangial proliferative glomerulonephritis (Thy1 GN) was induced by a single intravenous injection of anti-rat Thy-1.1 monoclonal antibody. In Thy1 GN, mesangial cell proliferation and expression of Col4 peaked at day 6. Immunohistochemical staining was performed to examine the expression of Smad1, phosphorylated Smad1 (pSmad1) and phosphorylated STAT3 (pSTAT3). The peak of glomerular Smad1 expression occurred at day 6, which was consistent with the peak of mesangial proliferation. Glomerular pSmad1 expression was upregulated from day 1 of Thy1 GN, and the peak of glomerular pSmad1 expression occurred at day 4 of the disease. In APB5-treated groups, both mesangial proliferation and glomerulosclerosis were reduced significantly. Smad1, pSmad1 and pSTAT3 expressions were also significantly reduced by administration of APB5 at every point examined. APB5 treatment reduced mesangial cell proliferation in association with reduction in pSmad1, pSTAT3 and Col IV protein expressions in vitro. Introduction of dominant negative STAT3 decreased the expression of Col4 significantly in cultured mesangial cells. These data suggest that activation of STAT3 and Smad1 is involved in the progress from mesangial cell proliferation to glomerulosclerosis.
[0047] The present invention has been achieved based on these findings.
[0048] The subject matters of the present invention are as described below.
[0049] (1) A method of detecting proliferative diseases causing sclerosis, comprising measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins in a biological sample.
[0050] (2) A method of evaluating the degree of progress and/or the efficacy of treatment of proliferative diseases causing sclerosis, comprising measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins in a biological sample.
[0051] (3) A kit for detecting proliferative diseases causing sclerosis, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins in a biological sample.
[0052] (4) A kit for evaluating the degree of progress and/or the efficacy of treatment of proliferative diseases causing sclerosis, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins in a biological sample.
[0053] (5) A method of detecting diabetic nephropathy, comprising measuring the expression of Smad1 and/or a substance having Smad1-activating effect in a biological sample.
[0054] (6) A method of evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy, comprising measuring the expression of Smad1 and/or a substance having Smad1-activating effect in a biological sample.
[0055] (7) A kit for detecting diabetic nephropathy, comprising a reagent(s) for measuring the expression of Smad1 and/or a substance having Smad1-activating effect.
[0056] (8) A kit for evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy, comprising a reagent(s) for measuring the expression of Smad1 and/or a substance having Smad1-activating effect.
[0057] (9) A prophylactic and/or therapeutic agent for proliferative diseases causing sclerosis, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0058] (10) A drug inhibiting the increase of extracellular matrix, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0059] (11) A drug inhibiting the expression of .alpha.1 type IV collagen, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0060] (12) A method of identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis, comprising judging whether or not a test substance inhibits the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0061] (13) A method of identifying substances effective in inhibiting the increase of extracellular matrix, comprising judging whether or not a test substance inhibits the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0062] (14) A method of identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen, comprising judging whether or not a test substance inhibits the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0063] (15) A kit for identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0064] (16) A kit for identifying substances effective in inhibiting the increase of extracellular matrix, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0065] (17) A kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
Effect of the Invention
[0066] According to the present invention, Smad1 was identified as a substance directly involved in the overproduction of type IV collagen, and it was demonstrated that Smad1 has a critical role as a causative of diabetic nephropathy. With these findings, it has become possible to detect diabetic nephropathy; besides, a prophylactic and/or therapeutic for diabetic nephropathy, a drug inhibiting the increase of extracellular matrix, and a drug inhibiting the expression of .alpha.1 type IV collagen have been provided. Further, according to the present invention, there have been provided a method and a kit for identifying substances effective in preventing and/or treating diabetic nephropathy; a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix; and a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen.
[0067] Further, according to the present invention, it has been demonstrated that the activation of STAT3 and Smad1 is in a key pathway regulating the interaction between cell proliferation and glomerulosclerosis which are the two phenomena observed in progressive glomerular disorders. With this finding, it has become possible to detect proliferative diseases causing sclerosis; besides, a prophylactic and/or therapeutic for proliferative diseases causing sclerosis, a drug inhibiting the increase of extracellular matrix, and a drug inhibiting the expression of .alpha.1 type IV collagen have been provided. Further, according to the present invention, there have been provided a method and a kit for identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis; a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix; and a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen.
[0068] The present specification encompasses the contents described in the specification and/or the drawings of Japanese Patent Application No. 2003-319538 based on which the present patent application claims priority.
BRIEF DESCRIPTION OF THE DRAWINGS
[0069] The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawing(s) will be provided by the Office upon request and payment of the necessary fee.
[0070] FIG. 1A shows activation of Col4 promoter by Smad1. Chromatin immunoprecipitation was carried out using cultured mesangial cells in the presence of AGEs or BSA (control), using the indicated antibodies. PCR was performed using primers for CIV-1 motif. The results of one experiment out of three independent experiments are shown.
[0071] FIG. 1B shows activation of Col4 promoter by Smad1. Cells were cotransfected with a vector containing CIV-1-lacZ reporter plasmid together with either a wild type Smad1 vector or a mock vector (Mock), and CMV-LUC as an internal control. Cell extracts were analyzed by Western blotting using anti-Smad1 and anti-pSmad1 antibodies. The results of one experiment out of three independent experiments are shown.
[0072] FIG. 1C shows activation of Col4 promoter by Smad1. After 48 hours, cultured cells were lysed, followed by measurement of .beta.-galactosidase and luciferase activities. Values are the averages of triplicate determinations with SD.
[0073] FIG. 2A shows Smad1 expression changing dynamically on exposure to AGEs. RNase protection assay was performed to examine the time course of Smad1 and Col4 mRNA expressions in mesangial cells treated with AGEs or BSA. Continuous exposure to AGEs promotes Smad1 expression continuously in parallel with increase in Col4 expression. The results of one experiment out of three independent experiments are shown.
[0074] FIG. 2B shows Smad1 expression changing dynamically on exposure to AGEs. Immunofluorescence photographs of mesangial cells cultured for 72 hr or 120 hr in the presence of AGEs or BSA. Data from one of three independent experiments are shown.
[0075] FIG. 2C shows Smad1 expression changing dynamically on exposure to AGEs. Smad1 and pSmad1 were analyzed by Western blotting in cells cultured for 72 hr in the presence of AGEs or BSA. Data from one of three independent experiments are shown.
[0076] FIG. 3A shows the effect of an antisense oligo specific to Smad1 in mesangial cells. After 72 hr-incubation with AGEs, mesangial cells were incubated for 16 hr in a medium containing an antisense oligo to Smad1 or 4-mismatch oligo (control). The antisense oligo-treated mesangial cells were immunofluorescently stained with anti-Smad1 antibody (green), and further stained with DAPI (blue). Data from one of three representative experiments are shown.
[0077] FIG. 3B shows the effect of an antisense oligo specific to Smad1 in mesangial cells. The antisense oligo to Smad1 or 4-mismatch oligo (control) was introduced into mesangial cells treated with AGEs. Data from one of three independent experiments are shown.
[0078] FIG. 3C shows the effect of an antisense oligo specific to Smad1 in mesangial cells. The antisense oligo to Smad1 inhibits the upregulation of Smad1 expression and, at the same time, the upregulation of Col4 expression. Data from one of three independent experiments are shown.
[0079] FIG. 4 shows the detection of Smad1 and ALK1 expressions in human patients with diabetic nephropathy. Glomeruli from 5 diabetic patients and 3 non-diabetic patients were immunohistochemically stained with anti-Smad1 and anti-ALK1 antibodies. Smad1 and ALK1 expressions were markedly detectable in the glomeruli of diabetic patients, but not detected in non-diabetic patients. All sections were counterstained with hematoxylin. Magnification is .times.400 for all photographs.
[0080] FIG. 5 shows the results of comparison between mRNA expression levels in mesangial cells cultured in the presence of AGEs and corresponding mRNA expression levels in mesangial cells cultured in the presence of BSA.
[0081] FIG. 6 shows the results of determination by Western blotting of urinary BMP2 levels in diabetic nephropathy patients.
[0082] FIG. 7 shows the results of determination by Western blotting of the expression of BMP2 and BMP4 in the presence of chronic stimulation with TGF-.beta. signal.
[0083] FIG. 8 is a schematic drawing of the signal transduction pathway based on the results of Example 1.
[0084] FIG. 9 is microscopic images showing diffuse increase of the mesangial matrix and expansion of the mesangial area in Thy1 GN rats. Overexpression of Col4 was observed in the expanded mesangial area by immunohistochemical staining with anti-Col4 antibody. APB5 reduced both mesangial proliferation and Col4 expression. Thy1 GN glomeruli were significantly positive in PDGF-B chain and PDGF .beta. receptor. APB5 also reduced these overexpressions. A-C: PAM; D-F: Col4; G-H: PDGF-B chain; J-K: PDGF .beta. receptor; A, D, G and J: normal control rats; B, E, H and J: disease control rats at day 6; C, F, I and L: APB5-treated rats at day 6.
[0085] FIG. 10A. Quantitation of histological changes and effects of APB5 administration in Thy1 GN. Glomerular cell number. Increase in glomerular cell number is observed in Thy1 GN groups.
[0086] FIG. 10B. Quantitation of histological changes and effects of APB5 administration in Thy1 GN. PCNA positive cell number in Thy1 GN. PCNA-positive cell number in the glomeruli of APB5-treated rats was significantly reduced at each point examined.
[0087] FIG. 10C. Quantitation of histological changes and effects of APB5 administration in Thy1 GN. Mesangial matrix expansion. Mesangial matrix increase was observed at Day 6 in Thy1 GN rats. APB5 significantly reduced mesangial matrix increase at each point examined.
[0088] FIG. 10D. Quantitation of histological changes and effects of APB5 administration in Thy1 GN. Expression of type IV collagen. In the control group, Col4 was strongly positive in the expanded mesangial area. APB5 significantly reduced Col4 expression. *P<0.001 vs. control group; **P<0.001 vs. APB5 non-treated disease control group.
[0089] FIG. 11. Immunohistochemical staining of Smad1, phosphorylated Smad1 and phosphorylated STAT3 in Thy1 GN. Smad1, phosphorylated Smad1 and phosphorylated STAT3 expressions showed a surprising increase in immunohistochemical staining of the glomeruli of Thy1 GN rats. Phosphorylated Smad1 was observed remarkably at the same site as nuclei were observed in Thy1 GN rats. APB5 treatment brought significant reduction in each of these substances. A-C: Smad1; D-F: phosphorylated Smad1; G-I: phosphorylated STATS; A, D and G: normal control rats; B, E and H: untreated Thy1 rats at day 6; C, F and I: APB5-treated rats at day 6.
[0090] FIG. 12A. Time course of Smad1, pSmad1 and pSTAT3 expressions. Day 0, day 1, day 2, day 4, day 6 and day 12 renal sections from Thy1 GN rats were immunohistologically stained with anti-Smad1, anti-pSmad1 and anti-pSTAT3 antibodies. Smad1 expression in Thy1 GN. Smad1 expression peaked at Day 6 and was calmed down at day 12.
[0091] FIG. 12B. Time course of Smad1, pSmad1 and pSTAT3 expressions. Day 0, day 1, day 2, day 4, day 6 and day 12 renal sections from Thy1 GN rats were immunohistologically stained with anti-Smad1, anti-pSmad1 and anti-pSTAT3 antibodies. Time course of the ratio of pSmad1 positive cells to the total glomerular cell number. pSmad1 expression peaked at Day 4.
[0092] FIG. 12C. Time course of Smad1, pSmad1 and pSTAT3 expressions. Day 0, day 1, day 2, day 4, day 6 and day 12 renal sections from Thy1 GN rats were immunohistologically stained with anti-Smad1, anti-pSmad1 and anti-pSTAT3 antibodies. Time course of pSTAT3 expression. The ratio of pSTAT3 positive portion to the mesangial area increased up to Day 6, and was calmed down at day 12. *P<0.001 vs. control group; **P<0.001 vs. each examination point.
[0093] FIG. 13A. Effects of APB5 treatment on Smad1 expression. The results of immunohistological staining and quantitation of Smad1, pSmad1 and pSTAT3 expressions revealed that these proteins were reduced by APB5 treatment as Col4 expression in mesangial matrix and glomeruli was reduced. *P<0.01 vs. APB5 non-treated disease control.
[0094] FIG. 13B. Effects of APB5 treatment on pSmad1 expression. The results of immunohistological staining and quantitation of Smad1, pSmad1 and pSTAT3 expressions revealed that these proteins were reduced by APB5 treatment as Col4 expression in mesangial matrix and glomeruli was reduced. *P<0.01 vs. APB5 non-treated disease control.
[0095] FIG. 13C. Effects of APB5 treatment on pSTAT3 expression. The results of immunohistological staining and quantitation of Smad1, pSmad1 and pSTAT3 expressions revealed that these proteins were reduced by APB5 treatment as Col4 expression in mesangial matrix and glomeruli was reduced. *P<0.01 vs. APB5 non-treated disease control.
[0096] FIG. 14A. Effects of APB5 in vivo. Inhibitory effect of APB5 on mesangial cell proliferation. Addition of PDGF-B increased the proliferation of mesangial cell, and APB5 significantly inhibited this proliferation. *P<0.05 vs. control; **P<0.05 vs. PDGF-B stimulated control.
[0097] FIG. 14B. Effects of APB5 in vivo. Western blot analysis revealed that pSTAT3, pSmad1 and Col4 protein expressions were reduced by addition of APB5. The results of one experiment out of three independent experiments are shown.
[0098] FIG. 15. Western blot analysis of gene-transfected mesangial cells. pSmad1 and Col4 protein expressions were reduced by dominant negative STATS. The results of one experiment out of three independent experiments are shown.
[0099] FIG. 16 is a schematic drawing of the signal transduction pathway based on the results of Examples 1 and 2.
[0100] FIG. 17 shows the results of Western blotting on urine samples from patients and healthy persons using anti-ALK-1 antibody as a primary antibody. Lanes 1-5: diabetic nephropathy patients; lane 6: patient with mitochondrial disease in which diabetes is complicated with a sclerosing, renal proliferative disease; lanes 7 and 8: patients with diabetes complicated with a non-sclerosing renal disease; lanes 9 and 10: healthy persons.
[0101] FIG. 18 shows the results of Western blotting on urine samples from a diabetic nephropathy patient under treatment, using anti-ALK-1 antibody as the primary antibody. Electrophoregrams taken at one week intervals are shown starting from the utmost left lane.
[0102] FIG. 19 shows the results of Western blotting on urine samples from patients and healthy persons using anti-Smad1 antibody as a primary antibody. Lanes 1-5: diabetic nephropathy patients; lane 6: patient with mitochondrial disease in which diabetes is complicated with a sclerosing, renal proliferative disease; lanes 7 and 8: patients with diabetes complicated with a non-sclerosing renal disease; lanes 9 and 10: healthy persons.
BEST MODE FOR CARRYING OUT THE INVENTION
1. Method and Kit for Detecting Diabetic Nephropathy
[0103] The present invention provides a method of detecting diabetic nephropathy, comprising measuring the expression of Smad1 and/or a substance having Smad1-activating effect in a biological sample.
[0104] The biological sample may be any biological sample as long as Smad1 and/or a substance having Smad1-activating effect is detectable therein. Specific examples of the biological sample which may be used in the invention include renal tissue sections, blood, sera and urine.
[0105] Nine Smad proteins (Smad1 to Smad9) have been identified in mammals, and Smad1 is known as a member of the bone morphogenetic protein (BMP) signal transduction pathway. BMPs regulate the transcription of target genes through activin receptor kinase 2, 3 and 6 (AKL2, ALK3 and ALK6) (Zwijsen A. et al., FEBS Letters 546, 2003, 133-139). In addition to Smad1, Smad5 and Smad8 are also involved in the BMP signaling specifically. Further, Smad2 and Smad3 are said to be involved in the TGF-.beta./activin signaling specifically. On the other hand, it has been elucidated that Smad1 transduces TGF-.beta. signals through activin receptor-like kinase 1 (ALK1) to thereby regulate the transcription of target genes in endothelial cells and hematopoietic cells (Goumans M J. et al., EMBO J., 2002, Apr. 2, 21(7), 1743-53). This means that two major signal transduction pathways (BMP pathway and TGF-.beta. pathway) exist in which transcription of target genes is regulated by activation of Smad1 (FIG. 8). However, sufficient examination has not been made yet as to a pathway of which combination is the most important.
[0106] The "substance having Smad1-activating effect" may be any substance as long as it is capable activating Smad1. For example, substances such as activin receptor-like kinase 1 (ALK1) and activin receptor-like kinase 3 (ALK3) which activate Smad1 directly may be given. Alternatively, substances such as bone morphogenetic proteins (BMPs) which activate Smad1 indirectly through activation of activin receptor kinases (ALKs) may be given.
[0107] It is clear from the study of the present inventors (Example 2) that PDGF also activates Smad1 though directly or indirectly is not known.
[0108] The expression "activates Smad1" means to phosphorylate serine residues of Smad1 and/or to translocate Smad1 into the nucleus.
[0109] Activin receptor-like kinase 1 (ALK1) is one of the type I receptors which bind to TGF-.beta. family proteins and is known to activate Smad1 (Chen Y G, et al., Smad1 recognition and activation by the ALK1 group of transforming growth factor-.beta. family receptors J. Biol. Chem. Vol. 274, No. 6, 3672-3677, 1999). ALK1 is expressed highly in the placenta, lung and vascular endothelial cells in human, and mutations of ALK1 result in human hereditary hemorrhagic telangiectasia (HHT) type II, also known as Osler-Rendu-Weber syndrome (non-patent document 17).
[0110] Activin receptor-like kinase 3 (ALK3), also known as BMPR-IA, is one of the type I receptors which bind to BMP family proteins, and is a serine-threonine receptor. ALK3 bound to BMPs activates Smad1, Smad5 and Smad8 and carries out the transduction of signals into the nucleus.
[0111] Bone morphogenetic proteins (BMPs) are a member of TGF-.beta. superfamily and involved in bone morphogenesis as well as development of four limbs and differentiation of the nerve system in the developmental stage. However, several reports that BMPs are involved in the regulation of development of the metanephros have been made recently and attracted attention. The kidney develops from the intermediate mesoderm and is formed through the three stages of pronephros, mesonephros and metanephros. Most of the pronephros and mesonephros undergo retroplasia eventually; the kidney which functions in mammalian adults is the metanephros. Transcripts for BMPs and their receptors have been localized in the developing metanephros. BMP2, BMP4 and BMP7 have direct or indirect roles in regulation of ureteric branching morphogenesis and branch formation in vitro. In vivo, it is reported that renal phenotypes vary between BMP7 null mutation-homozygous mutant mice and BMP4 null mutation-heterozygous mutant mice (Martinez G, et al, Int J Dev Biol. 2002; 46(4):525-33).
[0112] TGF-.beta. has diversified effects and plays important roles in proliferation/differentiation of various cells, production of extracellular matrix, apoptosis, immune system, and so forth. TGF-.beta. binds to receptors on cell surfaces to thereby transduce its signals into cells. A series of Smad protein molecules play important roles in the intracellular signal transduction.
[0113] To date, a pathway in which TGF-.beta. activates Smad2 and Smad3 through ALK5 under hyperglycemic conditions to thereby bring about the overproduction of extracellular matrix such as .alpha.1 type IV collagen has been considered to be involved in the development and progress of diabetic nephropathy (Jin H. et al., Kidney International, 63, 2003, 2010-2019). However, the present study shows for the first time that there exists a pathway which brings about overproduction of extracellular matrix through Smad1 under hyperglycemic conditions.
[0114] The expression of Smad1 and/or a substance having Smad1-activating effect may be measured at the nucleic acid level (i.e. mRNA expression) and/or the protein level.
[0115] With respect to the measurement at the nucleic acid level, total RNA may be extracted from a biological sample, and then the mRNA of Smad1 and/or a substance having Smad1-activating effect may be measured by RT-PCR using a pair of appropriate primers. These primers may be designed so that a specific region in sequences such as the nucleotide sequence for human-derived Smad1 mRNA available as NM_005900 in NCBI Refseq database (SEQ ID NO: 1); the nucleotide sequence for human-derived activin receptor-like kinase 1 mRNA available as NM_000020 in NCBI Refseq database (SEQ ID NO: 2); the nucleotide sequence for BMP2 mRNA available as ACCESSION NM_001200 VERSION NM_001200.1 in GenBank database (SEQ ID NO: 3); and the nucleotide sequence for BMP4 mRNA available as ACCESSION NM_001202 VERSION NM_001202.2 in GenBank database (SEQ ID NO: 4) is amplified specifically. Examples of nucleotide sequences for appropriate primer pairs are as described below.
RT-PCR to amplify Smad1 mRNA specifically:
TABLE-US-00001 Forward primer: (SEQ ID NO: 5) 5'-ACTACCACCACGGCTTTCAC-3' Reverse primer: (SEQ ID NO: 6) 5'-AATAGGATTGTGGGGTGAGC-3'
RT-PCR to amplify ALK1 mRNA specifically:
TABLE-US-00002 Forward primer: (SEQ ID NO: 7) 5'-ccgtcaagatct tctcctcg-3' Reveres primer: (SEQ ID NO: 8) 5'-tcatgtctgaggcgatgaag-3'
RT-PCR to amplify BMP2 mRNA specifically:
TABLE-US-00003 Forward primer: (SEQ ID NO: 9) 5'-cccagcgtgaaaagagagac-3' Reverse primer: (SEQ ID NO: 10) 5'-gagaccgcagtccgtctaag-3'
RT-PCR to amplify BMP4 mRNA specifically:
TABLE-US-00004 Forward primer: (SEQ ID NO: 11) 5'-tgagcctttccagcaagttt-3' Reverse primer: (SEQ ID NO: 12) 5'-cttccccgtctcaggtatca-3'
[0116] Alternatively, total RNA may be extracted from a biological sample, and then the mRNA of Smad1 and/or a substance having Smad1-activating effect may be measured by Northern hybridization using an appropriate probe. The appropriate probe may be designed based on sequences such as the nucleotide sequence for human-derived Smad1 mRNA available as NM_005900 in NCBI Refseq database (SEQ ID NO: 1); the nucleotide sequence for human-derived activin receptor-like kinase 1 mRNA available as NM_000020 in NCBI Refseq database (SEQ ID NO: 2); the nucleotide sequence for BMP2 mRNA available as ACCESSION NM_001200 VERSION NM_001200.1 in GenBank database (SEQ ID NO: 3); and the nucleotide sequence for BMP4 mRNA available as ACCESSION NM_001202 VERSION NM_001202.2 in GenBank database (SEQ ID NO: 4) so that it specifically hybridizes to a part or the entire region of such sequences. The probe may be labeled with a substance such as .sup.32P.
[0117] With respect to the measurement at the protein level, Smad1 and/or a substance having Smad1-activating effect may be measured by a method such as Western blotting, ELISA or immunohistochemical analysis using, for example, anti-Smad1 antibody and/or antibody to the substance having Smad1-activating effect. The anti-Smad1 antibody and/or antibody to the substance having Smad1-activating effect may be labeled with a fluorescent dye, enzyme, heavy metal, or the like (direct method). Alternatively, instead of labeling these antibodies, antibodies (secondary antibodies) specific to these antibodies (primary antibodies) may be labeled with a fluorescent dye, enzyme, heavy metal, or the like (indirect method). Preferably, these antibodies are immobilized on solid carriers such as test sections or latex particles.
[0118] The expression "measuring the expression of Smad1 and/or a substance having Smad1-activating effect" encompasses to detect the presence or absence of the expression of Smad1 and/or a substance having Smad1-activating effect and to quantitate the expression level of Smad1 and/or a substance having Smad1-activating effect.
[0119] According to the present invention, it is possible to detect diabetic nephropathy. Briefly, the expression of Smad1 and/or a substance having Smad1-activating effect indicates the onset of diabetic nephropathy. Conventionally, measurement of urinary type IV collagen and urinary albumin has been used in the diagnosis of diabetic nephropathy. The present invention may supersede or supplement such measurement.
[0120] Further, according to the present invention, it is possible to evaluate the degree of progress and/or the efficacy of treatment of diabetic nephropathy. Briefly, the expression level of Smad1 and/or a substance having Smad1-activating effect is proportional to the severity of diabetic nephropathy. When the treatment of diabetic nephropathy is effective, the expression level of Smad1 and/or a substance having Smad1-activating effect decreases keeping pace with the recovery of the patient.
[0121] Diabetic nephropathy is one of the microangiopathic disorders caused by chronic hyperglycemic conditions. Pathologically, diabetic nephropathy presents thickening of the renal glomerular basement membrane, expansion of the mesangial area and glomerulosclerosis lesions; clinically, diabetic nephropathy presents symptoms such as proteinuria (microalbuminuria), hypertension or edema. Ultimately, diabetic nephropathy patients often develop renal failure. In diabetes, abnormalities such as arteriolosclerosis, denaturing/fibrosing of the tubulointerstitium, etc. are recognized in tissues other than the glomeruli, and these abnormalities make glomerular lesions even worse. Therefore, it is possible to define the pathology in which proteinuria, hypertension and renal function disorders are gradually progressing after a specific period of diabetes, as nephropathy.
[0122] Recently, more than 30% of the primary diseases of those patients who newly receive dialysis treatment because of their end-stage renal failure is diabetic nephropathy, and this ratio is still increasing. Further, prognosis of these patients after the introduction of dialysis is not necessarily good, which is a big problem in medical treatment. Therefore, it has become an important problem to elucidate the mechanism of development and progress of diabetic nephropathy and to develop diagnosis and treatment thereof (Japanese Journal of Clinical Medicine vol. 55, 1997 special issue "Diabetes" (1)).
[0123] The present invention also provides a kit for detecting diabetic nephropathy, comprising a reagent(s) for measuring the expression of Smad1 and/or a substance having Smad1-activating effect.
[0124] Further, the present invention provides a kit for evaluating the degree of progress and/or the efficacy of treatment of diabetic nephropathy, comprising a reagent(s) for measuring the expression of Smad1 and/or a substance having Smad1-activating effect.
[0125] Examples of reagents for measuring the expression of Smad1 and/or a substance having Smad1-activating effect include, but are not limited to, a pair of primers capable of amplifying a specific region of the nucleotide sequence of Smad1 mRNA; a pair of primers capable of amplifying a specific region of the nucleotide sequence of the mRNA of a substance having Smad1-activating effect; a probe capable of hybridizing to a part or the entire region of Smad1 mRNA; a probe capable of hybridizing to a part or the entire region of the mRNA of a substance having Smad1-activating effect; an antibody to Smad1; and an antibody to a substance having Smad1-activating effect. These primer pairs and antibodies are as described above.
[0126] The kit of the invention may further comprise reverse transcriptase, DNA polymerase, RNase-free water, buffers, control mRNA, control primer pair, dNTP mix, instructions, and so forth (when the kit is intended to measure the expression of Smad1 and/or a substance having Smad1-activating effect at the nuclear acid level using a primer pair).
[0127] Alternatively, the kit of the invention may further comprise a transcription buffer, blocking reagent, washing solutions, instructions and so forth (when the kit is intended to measure the expression of Smad1 and/or a substance having Smad1-activating effect by Western blotting).
[0128] In another embodiment of the invention, the kit of the invention may further comprise a labeled secondary antibody, substrate (when the secondary antibody is an enzyme and labeled), diluents, reaction terminators, instructions and so forth (when the kit is intended to measure the expression of Smad1 and/or a substance having Smad1-activating effect by ELISA).
[0129] In still another embodiment of the invention, the kit of the invention may further comprise a color formers, aqueous hydrogen peroxide, buffers, a dyes for counter-staining, instructions and so forth (when the kit is intended to measure the expression of Smad1 and/or a substance having Smad1-activating effect by immunohistochemical analysis).
2. Method and Kit for Detecting Proliferative Diseases Causing Sclerosis
[0130] The present invention provides a method of detecting proliferative diseases causing sclerosis, comprising measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins in a biological sample.
[0131] The term "proliferative diseases causing sclerosis" means diseases where organ sclerosing is observed, and refers to a state where cell proliferation and/or expansion of extracellular matrix is recognized prior to sclerosis or in parallel with sclerosis. Proliferative diseases causing sclerosis include, but are not limited to, renal diseases damaging the glomeruli such as diabetic nephropathy, chronic glomerulonephritis, membranous proliferative glomerulonephritis, focal glomerulosclerosis, light chain disease (L chain deposition disease), lupus nephritis, cryoglobulinemic nephritis, HIV-associated nephritis and purpuric nephritis; hepatic fibrosis; arteriosclerosis; and the like.
[0132] Chronic glomerulonephritis is a state of chronic renal disorders, resulting in inflammation and gradual, progressive destruction of the glomeruli. Chronic glomerulonephritis is a syndrome including diseases such as membranous proliferative glomerulonephritis, focal glomerulosclerosis, light chain disease (L chain deposition disease), lupus nephritis, cryoglobulinemic nephritis, HIV-associated nephritis and purpuric nephritis.
[0133] Diabetic nephropathy is one of the representative diabetic complications and refers to a state in which renal functions are progressively reduced because of prolonged hyperglycemic conditions caused by diabetes.
[0134] Hepatic fibrosis is found in hepatic cirrhosis or chronic hepatitis, and refers to a state in which expansion of the extracellular matrix such as collagen is recognized in places (Disse's spaces) between the hepatic sinusoid wall and the hepatic cords. Hepatic fibrosis is a risk factor for the development of hepatocellular carcinoma, and it is known that progress of fibrosis makes the incidence of hepatocellular carcinoma higher.
[0135] Arteriosclerosis, which is a generic term for lesions where the arterial wall becomes thickened or sclerosed, is believed to be chronic inflammatory/proliferative lesions attributable to endothelial cell injuries caused by oxidation stress or the like. When arterial constriction and occlusion occur as a result of progress of arteriosclerosis, rise in blood pressure, myocardial infarction, cerebral infarction, etc. are caused. However, patients have few subjective symptoms prior to organ dysfunction.
[0136] The biological sample may be any biological sample as long as at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins is detectable therein. Specific examples of the biological sample which may be used in the invention include renal tissue sections, blood, sera and urine.
[0137] STAT3 is one of signal transducer and activator of transcription (STAT) proteins. STAT3 is activated via tyrosine phosphorylation by receptor-associated kinases when various cytokines and growth factors (such as interferon, epithelium growth factor, interleukin 5, interleukin 6, hepatocyte growth factor, leukemia inhibitory factor and bone growth factor 2) have bound to their receptors (phosphorylated STAT).
[0138] Phosphorylated Smad1 is a Smad1 which is in an activated state through phosphorylation of its serine residues.
[0139] The expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins may be measured at the nucleic acid level (i.e. mRNA expression) and/or the protein level.
[0140] With respect to the measurement at the nucleic acid level, total RNA may be extracted from a biological sample, and then the mRNA of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins may be measured by RT-PCR using a pair of appropriate primers. These primers may be designed so that a specific region in sequences such as the nucleotide sequence for human-derived STAT3 mRNA available as NM_139276 in NCBI Refseq database (SEQ ID NO: 19); the nucleotide sequence for human-derived Smad1 mRNA available as NM_005900 in NCBI Refseq database (SEQ ID NO: 1); the nucleotide sequence for the mRNA of human-derived activin receptor-like kinase 1 available as NM_000020 in NCBI Refseq database (SEQ ID NO: 2); the nucleotide sequence for the mRNA of human-derived activin receptor-like kinase 3 available as NM_004329 in NCBI Refseq database (SEQ ID NO: 20); the nucleotide sequence for BMP2 mRNA available as ACCESSION NM_001200 VERSION NM_001200.1 in GenBank database (SEQ ID NO: 3); and the nucleotide sequence for BMP4 mRNA available as ACCESSION NM_001202 VERSION NM_001202.2 in GenBank database (SEQ ID NO: 4) is amplified specifically. Examples of nucleotide sequences for appropriate primer pairs are as described below.
RT-PCR to amplify STAT3 mRNA specifically:
TABLE-US-00005 Forward primer: (SEQ ID NO: 21) 5'-agatgctcactgcgctgga-3' Reverse primer: (SEQ ID NO: 22) 5'-tccaatgcaggcaatctgtt-3'
RT-PCR to amplify Smad1 mRNA specifically:
TABLE-US-00006 Forward primer: (SEQ ID NO: 5) 5'-ACTACCACCACGGCTTTCAC-3' Reverse primer: (SEQ ID NO: 6) 5'-AATAGGATTGTGGGGTGAGC-3'
RT-PCR to amplify ALK1 mRNA specifically:
TABLE-US-00007 Forward primer: (SEQ ID NO: 7) 5'-ccgtcaagatct tctcctcg-3' Reverse primer: (SEQ ID NO: 8) 5'-tcatgtctgaggcgatgaag-3'
RT-PCR to amplify ALK3 mRNA specifically:
TABLE-US-00008 Forward primer: (SEQ ID NO: 23) 5'-tggcactgggatgaaatca-3' Reverse primer: (SEQ ID NO: 24) 5'-tggttacataaattggtccga-3'
RT-PCR to amplify BMP2 mRNA specifically:
TABLE-US-00009 Forward primer: (SEQ ID NO: 9) 5'-cccagcgtgaaaagagagac-3' Reverse primer: (SEQ ID NO: 10) 5'-gagaccgcagtccgtctaag-3'
RT-PCR to amplify BMP4 mRNA specifically:
TABLE-US-00010 Forward primer: (SEQ ID NO: 11) 5'-tgagcctttccagcaagttt-3' Reverse primer: (SEQ ID NO: 12) 5'-cttccccgtctcaggtatca-3'
[0141] Alternatively, total RNA may be extracted from a biological sample, and then the mRNA of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins may be measured by Northern hybridization using an appropriate probe. The appropriate probe may be designed based on sequences such as the nucleotide sequence for human-derived STAT3 mRNA available as NM_139276 in NCBI Refseq database (SEQ ID NO: 19); the nucleotide sequence for human-derived Smad1 mRNA available as NM_005900 in NCBI Refseq database (SEQ ID NO: 1); the nucleotide sequence for the mRNA of human-derived activin receptor-like kinase 1 available as NM_000020 in NCBI Refseq database (SEQ ID NO: 2); the nucleotide sequence for the mRNA of human-derived activin receptor-like kinase 3 available as NM_004329 in NCBI Refseq database (SEQ ID NO: 20); the nucleotide sequence for BMP2 mRNA available as ACCESSION NM_001200 VERSION NM_001200.1 in GenBank database (SEQ ID NO: 3); and the nucleotide sequence for BMP4 mRNA available as ACCESSION NM_001202 VERSION NM_001202.2 in GenBank database (SEQ ID NO: 4) so that it specifically hybridizes to a part or the entire region of such sequences. The probe may be labeled with a substance such as .sup.32P.
[0142] With respect to the measurement at the protein level, at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins may be measured by a method such as Western blotting, ELISA or immunohistochemical analysis using, for example, antibodies to at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins. These antibodies may be labeled with a fluorescent dye, enzyme, heavy metal, or the like (direct method). Alternatively, instead of labeling these antibodies, antibodies (secondary antibodies) specific to these antibodies (primary antibodies) may be labeled with a fluorescent dye, enzyme, heavy metal, or the like (indirect method). Preferably, these antibodies are immobilized on solid carriers such as test sections or latex particles.
[0143] The expression "measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins" encompasses to detect the presence or absence of the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins and to quantitate the expression level of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins.
[0144] According to the present invention, it is possible to detect proliferative diseases causing sclerosis. Briefly, the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins indicates the onset of proliferative diseases causing sclerosis. Conventionally, measurement of urinary type IV collagen and urinary albumin has been used in the diagnosis of renal diseases damaging the glomeruli (such as diabetic nephropathy and chronic glomerulonephritis). The present invention may supersede or supplement such measurement.
[0145] Further, according to the present invention, it is possible to evaluate the degree of progress and/or the efficacy of treatment of proliferative diseases causing sclerosis. Briefly, the expression level of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins is proportional to the severity of proliferative diseases causing sclerosis. When the treatment of proliferative diseases causing sclerosis is effective, the expression level of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins decreases keeping pace with the recovery of the patient.
[0146] The present invention also provides a kit for detecting proliferative diseases causing sclerosis, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins.
[0147] Further, the present invention provides a kit for evaluating the degree of progress and/or the efficacy of treatment of proliferative diseases causing sclerosis, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins.
[0148] Proliferative diseases causing sclerosis are as described above.
[0149] Examples of reagents for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins include, but are not limited to, a pair of primers capable of amplifying a specific region of the nucleotide sequence of the mRNA of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins; a probe capable of hybridizing to a part or the entire region of the mRNA of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins; and an antibody to at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins. These primer pairs and antibodies are as described above.
[0150] The kit of the invention may further comprise reverse transcriptase, DNA polymerase, RNase-free water, buffers, control mRNA, control primer pair, dNTP mix, instructions, and so forth (when the kit is intended to measure the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins at the nuclear acid level using a primer pair).
[0151] Alternatively, the kit of the invention may further comprise a transcription buffer, blocking reagent, washing solutions, instructions and so forth (when the kit is intended to measure the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins by Western blotting).
[0152] In another embodiment of the invention, the kit of the invention may further comprise a labeled secondary antibody, substrate (when the secondary antibody is an enzyme and labeled), diluents, reaction terminators, instructions and so forth (when the kit is intended to measure the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins by ELISA).
[0153] In still another embodiment of the invention, the kit of the invention may further comprise a color formers, aqueous hydrogen peroxide, buffers, a dyes for counter-staining, instructions and so forth (when the kit is intended to measure the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1, phosphorylated Smad1, activin receptor-like kinase 1, activin receptor-like kinase 3 and bone morphogenetic proteins by immunohistochemical analysis).
3. Drugs and Pharmaceutical Compositions
[0154] The present invention provides a prophylactic and/or therapeutic agent for proliferative diseases causing sclerosis, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0155] Proliferative diseases causing sclerosis are as described above.
[0156] Further, the present invention provides a drug inhibiting the increase of extracellular matrix, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1. Extracellular matrix is a stable biostructure surrounding cells within animal tissues which is an assembly of biopolymers synthesized by cells and secreted/accumulated out of the cells. Extracellular matrix also includes those structures that were synthesized/secreted by cultured cells and deposited around the cells. Extracellular matrix is found abundantly in connective tissues. The basement membrane is also a type of extracellular matrix.
[0157] Further, the present invention provides a drug inhibiting the expression of al type IV collagen, comprising as an active ingredient a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0158] These drugs may be used as pharmaceuticals or as reagents for use in experiments.
[0159] Example of the substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 include, but are not limited to, antisense oligonucleotides to Smad1 (one example of such nucleotide sequences is given in SEQ ID NO: 13); SANE (Smad1 Antagonistic Effector) (Raju G P et al., J Biol Chem. 2003 Jan. 3; 278(1):428-437); anti-PDGF .beta. receptor antibody (APB5); and antisense oligonucleotides to STAT3. Any of the proteins may be produced by the recombinant DNA technology in Escherichia coli, yeast, insect cells, animal cells or cell-free protein synthesis systems. Antisense oligonucleotides to Smad1 or STAT3 may be synthesized by known methods in commercial DNA synthesizers. APB5, which is anti-mouse PDGFR-.beta. antibody, may be prepared as follows. Briefly, a cDNA fragment corresponding to the extracellular domain of mouse PDGFR-.beta. was inserted into CD4Rg vector. A fusion protein with human IgG1 (PDGFR-.beta./Human IgG1) was expressed in COS-1 cell strain. The fusion protein was purified from the culture supernatant and used for immunizing Wistar rats. Fusion cells were prepared using splenic cells from the rats and myeloma cells, followed by selection of cells producing antibodies to PDGFR-.beta.. Not only APB5 but also other anti-PDGFR-.beta. specific antibodies that can be prepared by known methods may be used in the same manner as APB5 is used.
[0160] One substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 may be used. Alternatively, a plurality of such substances may be used in combination.
[0161] The substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 may be administered alone or together with pharmacologically acceptable carriers, diluents or excipients in appropriate forms of pharmaceutical compositions, to mammals (e.g. human, rabbit, dog, cat, rat, mouse, etc.) orally or parenterally. Dose levels may vary depending upon the patient to be treated, the target disease, symptoms, administration route, and so on. However, in the administration to adult patients, it is convenient to inject a substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 (e.g., SANE) intravenously at a dose of about 10-100 mg/kg body weight, preferably about 60-40 mg/kg body weight per administration about once or twice a month; preferably, the above dose is administered for two or three consecutive days at the beginning of treatment. In other parenteral administration and oral administration, similar dose levels may be used. If symptoms are particularly heavy, the dose may be increased accordingly.
[0162] Compositions for oral administration include solid or liquid preparations such as tablets (including sugar-coated tablets and film-coated tablets), pills, granules, dispersants, capsules (including soft capsules), syrups, emulsions and suspensions. These compositions may be prepared according to conventional methods and may contain carriers, diluents or excipients conventionally used in the field of medicine manufacture. For example, lactose, starch, sucrose, magnesium stearate and the like are used as carriers or excipients for tablets.
[0163] Compositions for parenteral administration include, for example, injections and suppositories. Injections include intravenous injections, subcutaneous injections, intradermal injections, muscle injections, instilment injections, etc. Such injections may be prepared by conventional methods, i.e., by dissolving, suspending or emulsifying a substance having an inhibitory effect on the expression of Smad1 in an aseptic, aqueous or oily liquid conventionally used in injections. Examples of aqueous liquids for injection include physiological saline and isotonic solutions containing glucose and other auxiliary agents. They may be used in combination with a suitable auxiliary solubilizer such as alcohol (e.g. ethanol), polyalcohol (e.g. propylene glycol, polyethylene glycol), nonionic surfactant [e.g. Polysorbate 80TM, HCO-50 (polyoxyethylene (50 mol) adduct of hydrogenated castor oil)], etc. Examples of oily liquids for injection include sesame oil and soybean oil. They may be used in combination with an auxiliary solubilizer such as benzyl benzoate, benzyl alcohol, etc. Usually, the prepared injections are filled in appropriate ampoules. Suppositories for administration into rectum may be prepared by mixing a substance having an inhibitory effect on the expression of Smad1 with a conventional suppository base.
[0164] It is convenient to formulate the above-described pharmaceutical compositions for oral or parenteral administration into unit dosage forms that would give an appropriate dose of the active ingredient. Examples of such unit dosage forms include tablets, pills, capsules, injections (ampoules), and suppositories.
[0165] The above-described pharmaceutical compositions may contain other active ingredients as long as they do not produce undesirable interaction when combined with the substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0166] When the substance having an inhibitory effect on the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 is an antisense oligonucleotide to Smad1 or STAT3, the antisense oligonucleotide may be introduced into the patient or cells of the patient by known methods of gene transfer. For example, a method in which an antisense oligonucleotide to Smad1 or STAT3 is enclosed in liposomes and then taken into cells ("Lipidic vector systems for gene transfer" (1997) R. J. Lee and L. Huang Crit. Rev. Ther. Drug Carrier Syst 14, 173-206; Nakanishi M. et al., "Protein, Nucleic Acid and Enzyme" Vol. 44, No. 11, 1590-1596 (1999)); the calcium phosphate method, electroporation, lipofection, microinjection, a method using a gene gun, and so on may be used. When an antisense oligonucleotide to Smad1 or STAT3 is introduced into cells, a part of the cells at the diseased site may be taken out and then returned to the original tissue after in vitro gene transfer. Alternatively, the antisense oligonucleotide may be introduced directly into the tissue of the diseased site.
[0167] Pharmaceutical compositions comprising an antisense oligonucleotide to Smad1 or STAT3 as an active ingredient may comprise, if necessary, pharmaceutically acceptable carriers (e.g. diluents such as physiological saline or buffer). Administration of the pharmaceutical composition may be continued until the efficacy of treatment is recognized or until amelioration of conditions is achieved at appropriate dose, with an appropriate administration method and at appropriate frequency, depending on the severity of the target disease and the responsiveness of the patient body.
4. Method and Kit for Identifying Substances Effective in Preventing and/or Treating Proliferative Diseases Causing Sclerosis;
[0168] Method and Kit for Identifying Substances Effective in Inhibiting the Increase of Extracellular Matrix; and Method and Kit for Identifying Substances Effective in Inhibiting the Expression of .alpha.1 Type IV Collagen
[0169] The present invention provides a method of identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis, comprising judging whether or not a test substance inhibits the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0170] Proliferative diseases causing sclerosis are as described above.
[0171] Further, the present invention provides a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix, comprising judging whether or not a test substance inhibits the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0172] Still further, the present invention provides a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen, comprising judging whether or not a test substance inhibits the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0173] Herein below, one embodiment of the above-described method will be described.
[0174] First, cells capable of expressing at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 are prepared. Any cell capable of expressing at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 may be used. Specific examples which may be used in the invention include mesangial cells derived from renal glomeruli of animals (e.g. those disclosed in Reference S1 described later) and vascular smooth muscle cells.
[0175] Cells capable of expressing at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 are cultured in the presence and the absence of a test substance, followed by measurement of the at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1. Examples of the test substance include, but are not limited to, peptides, proteins, non-peptidic compounds, synthetic compounds, fermentation products, cell extracts, plant extracts and animal tissue extracts. These substances may be either novel substances or known substances. The culturing of the cell capable of expressing at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 may be performed under culture conditions suitable for the relevant cell. For example, mesangial cells derived from mouse renal glomeruli (Reference S1 described later) may be cultured as described in Example 1. The method of measuring the expression of STAT3 and Smad1 is as described above.
[0176] The expression of phosphorylated STAT3 and phosphorylated Smad1 may be measured by immunostaining using anti-phosphorylated STAT3 antibody (Santa Cruz Biotechnology) and anti-phosphorylated Smad1 antibody (Calbiochem), respectively, as a primary antibody.
[0177] The expression level of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 when cells were cultured in the presence of a test substance is compared with the expression level of the at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1 when cells were cultured in the absence of the test substance. When the former is less than the latter, the test substance is judged effective in preventing and/or treating proliferative diseases causing sclerosis; or the test substance is judged effective in inhibiting the increase of extracellular matrix; or the test substance is judged effective in inhibiting the expression of .alpha.1 type IV collagen. On the contrary, when the former is equivalent to the latter, or when the former is more than the latter, the test substance is judged ineffective in preventing and/or treating proliferative diseases causing sclerosis; or the test substance is judged ineffective in inhibiting the increase of extracellular matrix; or the test substance is judged ineffective in inhibiting the expression of .alpha.1 type IV collagen.
[0178] The present invention also provides a kit for identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0179] Further, the present invention provides a kit for identifying substances effective in inhibiting the increase of extracellular matrix, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0180] Still further, the present invention provides a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen, comprising a reagent(s) for measuring the expression of at least one substance selected from the group consisting of STAT3, phosphorylated STAT3, Smad1 and phosphorylated Smad1.
[0181] Proliferative diseases causing sclerosis are as described above.
[0182] Examples of reagents for measuring the expression of STAT3 or Smad1 include, but are not limited to, primer pairs capable of specifically amplifying a specific region of the nucleotide sequence of STAT3 mRNA or Smad1 mRNA, probes capable of specifically hybridizing to a part or the entire region of STAT3 mRNA or Smad1 mRNA, and antibodies to STAT3 or Smad1. These primer pairs and antibodies are as described above.
[0183] Examples of reagents for measuring the expression of phosphorylated STAT3 or phosphorylated Smad1 include, but are not limited to, anti-phosphorylated STAT3 antibody (Santa Cruz Biotechnology) and anti-phosphorylated Smad1 antibody (Calbiochem). These antibodies are as described above.
[0184] The kit of the invention may further comprise reverse transcriptase, DNA polymerase, RNase-free water, buffers, control mRNA, control primer pair, dNTP mix, instructions, and so forth (when the kit is intended to measure the expression of STAT3 or Smad1 at the nuclear acid level using a primer pair).
[0185] Alternatively, the kit of the invention may further comprise a transcription buffer, blocking reagent, washing solutions, instructions and so forth (when the kit is intended to measure the expression of STAT3 or Smad1 by Western blotting).
[0186] In another embodiment of the invention, the kit of the invention may further comprise a labeled secondary antibody, substrate (when the secondary antibody is an enzyme and labeled), diluents, reaction terminators, instructions and so forth (when the kit is intended to measure the expression of STAT3, phosphorylated STAT3, Smad1 or phosphorylated Smad1 by ELISA).
[0187] In still another embodiment of the invention, the kit of the invention may further comprise color formers, aqueous hydrogen peroxide, buffers, dyes for counter-staining, instructions and so forth (when the kit is intended to measure the expression of STAT3, phosphorylated STAT3, Smad1 or phosphorylated Smad1 by immunohistochemical analysis).
[0188] Hereinbelow, the present invention will be described specifically with reference to the following Examples. These Examples are provided only for the purpose of illustrating the present invention and are not intended to limit the scope of the invention.
Example 1
[0189] To identify the protein which binds to the CIV site in the promoter region of the mouse Col4 gene, the present inventors constructed a cDNA library from mouse mesangial cells treated with AGEs. Here, the inventors used a yeast one-hybrid system to isolate a clone that encodes a specific transcription factor from the library, and then identified this clone as encoding Smad1. To confirm the binding of Smad1 to the Col4 promoter in vivo, the inventors performed a chromatin immunoprecipitation (ChIP) assay. Precipitated DNA was purified, and the promoter region of the Col4 gene was detected by PCR. Anti-Smad1 antibody precipitated chromatin containing the CIV-1 site from cells stimulated with AGEs (FIG. 1A). In contrast, no precipitation was observed in BSA-exposed cells. The inventors found that Smad4 also binds to the CIV-1 site (FIG. 1A). Next, the inventors examined the transcriptional activity of the Col4 gene by a reporter assay. The inventors constructed a vector by linking the CIV-1 promoter upstream of LacZ, and then cotransfected into COST cells with a wild-type Smad1 vector. First, the inventors confirmed the expression of Smad1 by Western blot analysis (FIG. 1B). Phosphorylated Smad1 (pSmad1) was detected in culture supernatant of cells that have been transfected with the wild-type Smad1 vector. Cotransfection of the wild-type Smad1 resulted in a 18-fold increase in .beta.-galactosidase activity compared with that activity in cells cotransfected with mock vector (Mock) (FIG. 1C). .beta.-galactosidase activity was corrected with luciferase activity, and the .beta.-galactosidase activity in cells cotransfected with the mock vector was taken as the standard. Mock had no effect on the .beta.-galactosidase activity in the cells cotransfected with it. These results suggest that Smad1 is certainly involved in the induction of Col4 gene transcription. Thus, Smad1 transcriptionally regulates the Col4 gene.
[0190] To determine whether Smad1 is transcriptionally upregulated by AGEs, the inventors examined the expression of Smad1 in mesangial cells with or without AGEs stimulation. The levels of Smad1 mRNA increased in a time-dependent manner (FIG. 2A). Similarly, the levels of Col4 mRNA increased in parallel with the upregulation of Smad1 transcription. In the presence of BSA, however, no change was detected in the expression of Smad1 mRNA or Col4 mRNA. Smad1 is known to be phosphorylated and translocated into the nucleus where it participates in the transcriptional regulation of target genes (11)(12). Therefore, the inventors next examined the issue of whether the phosphorylation and translocation of Smad1 is affected by AGEs treatment in mesangial cells (FIG. 2B). Consistent with the results on mRNA, Smad1 and pSmad1 were distributed throughout mesangial cells with a preferential cytoplasmic localization after a 72-hr incubation in the presence of AGEs. Furthermore, nuclear accumulation of Smad1 and pSmad1 in response to AGEs was observed in the cells 120 hours after AGEs stimulation, while BSA-treatment led to little expression of Smad1 and pSmad1. Similarly, both Smad1 and pSmad1 were detected in extracts from AGEs-treated cells, but not in extracts from BSA-treated cells (FIG. 2C). These findings indicate that the regulation of Col4 is correlated with the expression of Smad1 under AGEs exposure.
[0191] To examine the importance of Smad1 in the signaling pathway mediating AGEs-induced overexpression of Col4, the inventors specifically inhibited this pathway with an antisense gene (AS). The AGEs-mediated induction of Smad1 was completely abolished in the presence of the antisense gene, but not in the presence of a control oligo (4-mismatch) (FIGS. 3A and 3B). The overexpression of Col4 was remarkably attenuated by the inhibition of Smad1. Smad1 mismatch oligo (control) had no effect on Col4 expression (FIG. 3C). These data indicate that Smad1 plays a critical role in the regulation of Col4 expression. Development and progress of diabetic nephropathy in diabetic patients is a huge clinical problem associated with morbidity and mortality. It is clear that in the current therapy, optimal glycemic control can postpone the development and progress of diabetic nephropathy but cannot prevent this disease (1) (2). The antisense oligo to Smad1 remarkably attenuates the AGEs-mediated overproduction of Col4. These findings suggest that blockade of Smad1 signaling may prevent ECM production in mesangial cells in diabetic nephropathy. This effect was observed under prolonged AGEs stimulation. Therefore, Smad1 may be a novel therapeutic target in diabetic complications and be useful in combination with the current therapy. To further elucidate the mechanism of Smad1 expression after AGEs treatment, the inventors investigated the expression of activin receptor-liked kinase 1 (ALK1) in mesangial cells. ALK1 is one of the TGF-.beta. receptor family proteins and phosphorylates Smad1 and Smad5 specifically. ALK1 is highly expressed in vascular endothelial cells (13) (14), and may be essential for vascular maturation and stabilization (15) (16). Mutations of ALK1 results in human hereditary hemorrhagic telangiectasia (HHT) type II, also known as Osler-Rendu-Weber syndrome (17). Recent reports show that ALK1 mediates signals from TGF-.beta. through Smad1 to modulate TGF-.beta.-responsive genes (18) (19). The inventors were able to detect an increase in ALK1 expression in AGEs-treated mesangial cells at both mRNA and protein levels, using an RNase protection assay and Western blot analysis, respectively (data not shown). Finally, the inventors investigated the glomerular expression of Smad1 and ALK1 in human diabetic nephropathy. Indirect fluorescent antibody technique was carried out on renal biopsies (diabetic nephropathy) and on normal kidney tissue. Glomerular immunoreactivities to Smad1 and ALK1 antibodies were proportionate to the severity of sclerotic lesions in glomeruli with diabetic nephropathy: on the other hand, immunoreactive signals were nearly absent in normal glomeruli (FIG. 4). These histological observations suggest that the ALK1/Smad1 signaling pathway is linked to the upregulation of Col4. Since diabetic nephropathy in human is a process that progresses slowly over many years, it is likely that a very detailed evaluation of this phenomenon will be required to elucidate the interaction of Smad1 and ALK1 in this condition.
[0192] Targeted gene disruption of Smad1 gene in mice results in embryonic lethality. This suggests that Smad1 plays critical roles in early embryogenesis (20). However, because of the early embryonic lethality, little is known about the role of Smad1 in vivo, particularly in the adult. Smad1 is well known to transduce BMP signals (12) and to be especially important in the development of kidney (21). However, Smad1 expression is not detected in glomeruli in adult mice (22). The inventors demonstrated for the first time that AGEs induce the expression of Smad1 in adult mouse glomeruli. The inventors observed that chronic exposure to AGEs, inducing sustained increase in Smad1 expression, leads to Col4 overproduction and suggested that Smad1 is a critical modulator in diabetic conditions. Since AGEs are significantly involved in diabetic complications, the results obtained by the inventors may give valuable insights into any disease and condition where collagen deposition occurs, such as diabetes or aging. Changes in GBM structure occur very early in diabetic nephropathy, even before microalbuminuria is apparent. Therefore, in diabetic nephropathy, Smad1 may be the earliest indicator of renal dysfunction. Recent reports demonstrated that ALK1 mediates signals from TGF-.beta. via Smad1 (18, 19). Therefore, the inventors investigated the expression of ALK1 in mouse mesangial cells and human kidney tissues. As a result, the inventors demonstrated that ALK1 and Smad1 are expressed in renal glomeruli in response to the progress of diabetic conditions. These results lead to the development of novel therapeutic strategies for the treatment of diabetic complications in various organs by suppressing the pathologically activated production of collagen (1). This confirms that sustained hyperglycemia, reflected by an increase in AGEs, is a prerequisite for the development of long-term diabetic complications (23, 24). Glycation leads ultimately to increased crosslinking of collagen resulting in increased arterial stiffness (25). Moreover, the correlation between AGEs and the development of diabetic complications and arteriosclerosis has been recently emphasized by studies using specific AGEs inhibitors (26, 27). Although Col4 is the principal component of the vascular basement membrane, the cellular and molecular mechanisms involved in the upregulation of Col4 in diabetic conditions or aging are as yet poorly understood. The inventors here elucidate that Smad1 directly regulates Col4 gene expression. Accordingly, the inventors speculate that the ALK1/Smad1 signaling pathway may mediate the development of arteriosclerosis, both in diabetic patients and in the aged, by inducing an overproduction of ECM. Further work is in progress to clarify the role of the ALK1/Smad1 signaling pathway in diabetic or aged animal models.
[0193] Further, mRNA expression levels in mesangial cells cultured in the presence of AGEs were compared with corresponding mRNA expression levels in mesangial cells cultured in the presence of BSA (FIG. 5). In the presence of AGEs, transcription of BMPRII and BMP4 was remarkably enhanced. Although no big change was recognized in Smad1 transcription level, big changes in its transcription level are difficult to perceive because Smad1 is a transcription factor. Besides, it is believed that translocation from the cytoplasm to the nucleus and phosphorylation (which are important for the effect of a transcription factor) are not reflected in the experimental results using microarrays.
[0194] Urinary BMP2 levels in a diabetic nephropathy patient were determined by Western blotting. The results revealed that urinary BMP2 was reduced as the disease was improved by treatment (FIG. 6).
[0195] Chronic stimulation with TGF-.beta. signals promoted expression of BMP2 and BMP4 proteins remarkably (FIG. 7). This suggests that these BMP proteins perform central functions in the TGF-.beta. signaling pathway.
Materials and Methods
Cell Culture
[0196] A glomerular mesangial cell strain was established from glomeruli isolated from normal, 4 week-old mice (C57BL/6J.times.SJL/J), and was identified according to the method previously described (S1). The mesangial cells were cultured in B medium (a 3:1 mixture of minimal essential medium/F12 modified with trace elements) supplemented with 1 mM glutamine, 100 units/ml penicillin, 100 mg/ml streptomycin and 20% fetal calf serum. The cultured cells fulfilled the criteria generally accepted for glomerular mesangial cells (S2). AGEs or BSA exposure was carried out as described previously (S3).
cDNA Library Construction and Yeast One-Hybrid Screening
[0197] The inventors prepared cDNA from mouse mesangial cells exposed to AGEs and inserted it into pGAD vector. Yeast one-hybrid screening was carried out using MATCHMAKER one-hybrid kit (Clontech, Palo Alto, Calif.). Briefly, tandem repeats of the 27 bp sequence (TTCCTCCCCTTGGAGGAGCGCCGCCCG: CIV-1) (SEQ ID NO: 14) from the mouse Col4 gene were ligated into a yeast integration and reporter vector pHISi (MATCHMAKER One-hybrid: Clontech, Palo Alto, Calif.) or pLacZi (MATCHMAKER One-hybrid: Clontech, Palo Alto, Calif.) to generate CIV-1-pHISi or CIV-1-pLacZi vector, respectively (S4). Each of these reporter constructs was linearized and integrated into the chromosome of yeast YM4271 (MATCHMAKER One-hybrid: Clontech, Palo Alto, Calif.). The resulting yeast cells with the integrated CIV-1-pHISi and CIV-1-pLacZi were used for one-hybrid screening with the AGEs stimulated-mouse mesangial cell-derived cDNA library. Positive colonies were selected on SD/-His/-Leu plates with 45 mM 3-amino-1, 2, 4-triazole (3-AT). To exclude false positive clones, the inventors performed .beta.-galactosidase filter lift assay (Clontech). Plasmids were rescued from the remaining yeast colonies and retransformed into E. coli DH5.alpha..
ChIP Assay
[0198] ChIP assays were essentially performed as described previously by Luo et al (S5). The inventors used anti-Smad1 antibody, anti-Smad4 antibody (Santa Cruz Biotechnology, Santa Cruz, Calif.) or normal control IgG at 4.degree. C. overnight. PCR was performed to amplify the region containing the CIV-1 motif. The 5' primer was 5'-GGAGCTCCCCAATTTGTTG-3' (SEQ ID NO: 15), and the 3' primer was 5'-CAGCCTCCGCCTCTTACC-3' (SEQ ID NO: 16). The resulting PCR product was around 100 bp on agarose gel electrophoresis.
Reporter Assay
[0199] 1.3.times.105 COS7 cells in 10% fetal bovine serum-added Dulbecco's modified Eagle's Medium (DMEM) were seeded into six-well plates. Eight hours later, the cells were cotransfected with 750 ng of CIV-1-LacZ reporter construct along with either 750 ng of vector encoding wild type Smad1 or a mock vector. 75 ng of CMV-LUC (Firefly luciferase gene under the control of CMV promoter) was also introduced into the cells as an internal control. Transfection was performed with FuGENE6 transfection reagent (Roche Molecular Biochemicals, Indianapolis, Ind.). Forty-eight hours later, the cells ware harvested in reporter lysis buffer. Then, .beta.-galactosidase and luciferase activities were measured using .beta.-galactosidase Reporter System (BD Biosciences, San Jose, Calif.) and Luciferase Reporter Assay System (Promega, Madison, Wis.). .beta.-galactosidase results were corrected with luciferase activities measured.
RNase Protection Assay
[0200] RNase protection assay was performed as described previously (S6). The nucleotide sequence of the probe used in this assay corresponds to positions 1172-1433 of Acc No. U58992, as described below:
TABLE-US-00011 (SEQ ID NO: 17) cccaccacc gtctgcaaga tccccagcgg gtgcagcttg aaaatcttca acaaccaaga gtttgctcag ctactggcgc agtctgtgaa ccacgggttc gagaccgtgt atgaactcac caaaatgtgc actattcgga tgagcttcgt gaagggttgg ggagccgaat accaccggca ggatgttacc agcaccccct gctggattga gatccatctg catggccctc tccagtggct ggataaggtt ctgacccaga tgg
Western Blotting
[0201] Mesangial cells were cultured in the presence of AGEs or BSA (as control) for 72 hours. Cells were harvested in sample buffer, resolved by SDS-polyacrylamide gel electrophoresis and transferred to nitro-cellulose membrane and subjected to Western blot using a 1:500 dilution of anti-Smad1 antibody and anti-pSmad1 antibody (Santa Cruz Biotechnology), followed by detection using an enhanced chemiluminescence detection system (Invitrogen, Carlsbad, Calif.).
Immunostaining of Cultured Cells and Cytosections
[0202] Cultured cells were fixed in 4% paraformaldehyde. The following antibodies were used: anti-Smad1 antibody, 1:100 (Santa Cruz Biotechnology); anti-pSmad1 antibody, 1:100 (Calbiochem). An appropriate fluoresceine isothiocyanate-conjugated secondary antibody was used for visualization and imaging was done using a laser microscope and a fluorescent microscope (Olympus, Tokyo, Japan).
Smad1 Morpholino Antisense Oligonucleotide
[0203] The antisense oligonucleotide used was a 25-nucleotide morpholino oligo (Genetools LLC, Philomath, Oreg.). The sequence is 5'-CAAGCTGGTCACATTCATAGCGGCT-3' (SEQ ID NO: 13). As a control, an oligo with the base composition 5'-CAtGCTcGTCACATTCAaAGCcGCT-3' (SEQ ID NO: 18) was used. In vitro RNA transcription was performed as previously described (S7).
Histology
[0204] Histopathological studies were performed on human tissues. This experiment was in accordance with the Declaration of Helsinki, and the inventors obtained approval from the institutional review board. All patients gave their informed written consent. Diabetic nephropathy renal specimens (n=5) were obtained from renal biopsies. Control human tissue sections were obtained from normal renal cortex harvested from kidneys removed for renal malignancy. Tissues for analysis were sampled from the pole opposite the tumor. Cryopreserved kidney tissues were cut into 5 .mu.m thick sections and fixed in acetone for 5 min. Endogenous peroxidase activity was quenched by a 20 min-incubation in the dark with 1% H2O2 in methanol. To eliminate nonspecific staining, sections were incubated with the appropriate preimmune serum for 20 min at room temperature, followed by immunostaining with primary antibodies: anti-Smad1 (Santa Cruz Biotechnology) and anti-ALK1 (R&D, McKinley Place, Nebr.) antibodies.
Analysis of Expression Levels with Microarrays
[0205] Individual mRNA expression levels in mesangial cells cultured in the presence of AGEs and mesangial cells cultured in the presence of BSA were measured using Agilent Technologies Mouse cDNA Microarray Kit.
Example 2
[0206] Glomerulosclerosis is characterized by quantitative increase in extracellular matrix (ECM). Type IV collagen (Col4) is one of the major components of expanded ECM in glomerular diseases. However, the molecular mechanism of transcriptional regulation of Col4 gene was not clear until the recent report of the present inventors. The inventors showed that Smad1 transcriptionally regulates the overexpression of Col4 in diabetic nephropathy (A8). Smad1 directly transduces signals to downstream target genes, such as osteopontin (A9), inhibition of differentiation (A10), and type I collagen (A11), and is essentially important for the development and progress of kidney diseases (A12). These findings suggest that Smad1 is a transcriptional factor critical for the development and progress of glomerulosclerosis.
[0207] Signal transducer and activation (STAT) proteins were shown to be involved in signal transduction of numerous cytokines and growth factors. STAT3 activation is a key regulator for PDGF-induced mitogenesis (A13). Nakashima et al reported that transcriptional coactivator p300 physically interacts with STAT3 and Smad1, which were followed by the subsequent activation of the target gene transcription in astrocyte differentiation (A14). The inventors postulated from these findings that PDGF activates the STAT3-Smad1 signaling pathway in mesangial cell proliferation and that this process is essential for mesangial cells to progress into glomerulosclerosis.
[0208] In this study, the inventors demonstrated the effect of administration of anti-PDGF .beta.-receptor antibody that inhibits activation by PDGF-B chain in rat glomerulonephritis, and examined the signaling pathway for regulating both glomerular cell proliferation and glomerulosclerosis in vivo and in vitro.
Materials and Methods
Animals
[0209] Male Wistar rats (CLEA Japan, Inc. Japan) weighing 180 to 200 g were used for this study. Rats were raised under specific pathogen-free conditions. All of the animal experiments were performed in accordance with institutional guidelines, and the Review Board of Tokushima University granted ethical permission to this study.
Induction of Thy1 Glomerulonephritis
[0210] Experimental mesangial proliferative glomerulonephritis (Thy1 GN) was induced by a single intravenous injection of anti-rat Thy-1.1 monoclonal antibody (1 mg/kg) (Cedarlane Laboratories, Ontario, Canada) as described elsewhere (A15). These rats were sacrificed at days 1, 2, 4, 6, and 12 (n=6 per group) after the administration of anti-Thy-1.1 antibody. Six age-matched rats were injected with vehicle alone and sacrificed as controls.
Protocol of Treatment with Anti-PDGF .beta.-R Antibody in Thy1 GN
[0211] A rat monoclonal anti-PDGF .beta.-receptor antibody (APB5) and its antagonistic effects on the PDGF .beta.-R signal transduction pathway in vivo and in vitro were described previously (A16, A17). The rats were injected intraperitoneally everyday with 400 .mu.g of APB5 (kindly provided by Prof. Shinichi Nishikawa of RIKEN) or irrelevant isotype-matched control rat IgG (kindly provided by Prof. Shinichi Nishikawa of RIKEN) after the administration of anti-Thy1.1 antibody from day 0, and were sacrificed at days 1, 2, 4, 6, and 12 (n=6 per group).
Histological Examination
Light Microscopy
[0212] After removal of the kidney, tissue blocks for light microscopy study were fixed in methyl Carnoy's solution (methanol: glacial acetic acid=3:1), and embedded in paraffin. Sections (2 .mu.m) were stained with hematoxylin and eosin (HE), periodic acid-Schiff's reagent (PAS) and periodic acid-methenamine silver (PAM).
Immunohistochemistry
[0213] Kidney sections were processed for immunohistochemistry according to standard procedures. For studying proliferating cell nuclear antigen (PCNA), Col4 and Smad1, methyl Carnoy's solution-fixed and paraffin-embedded tissue blocks were used. Kidney sections were rehydrated and treated with 0.3% hydrogen peroxide in methanol for 30 minutes to deactivate endogenous peroxidase. To eliminate nonspecific staining, sections were incubated with the appropriate preimmune serum for 20 minutes at room temperature, and then incubated with Avidin D blocking solution and Biotin blocking solution (Vector, Burlingham, Calif., USA) for 15 minutes each. Sections were incubated with anti-PCNA antibody (1:200 dilution), anti-Col4 antibody (1:200 dilution), and anti-Smad1 antibody (1:100 dilution) (Santa Cruz Biotechnology, CA, USA) for 60 minutes at room temperature, and then incubated with appropriate biotinylated secondary antibodies followed by incubation with avidin-biotin peroxidase complex (Vectastain ABC System, Vector). Peroxidase conjugates were subsequently localized using diaminobenzidine tetrahydrochloride (DAB). For studying phosphorylated Smad1 (pSmad1) and phosphorylated (pSTAT3), tissues were snap-frozen in cold acetate in OCT compound (Miles Inc., IN, USA), and were cut into 4 .mu.m-thick sections and fixed in acetone for 5 minutes, and treated with 0.3% hydrogen peroxide in methanol for 30 minutes to deactivate endogenous peroxidase. Sections were treated in the same manner as sections for PCNA examination were treated, with the following primary antibodies: anti-pSmad1 antibody (1:100 dilution) (Calbiochem, CA, USA) and anti-pSTAT3 antibody (1:100 dilution) (Santa Cruz Biotechnology). To evaluate the nuclear number, sections were counterstained with hematoxylin solution.
Quantitation of Light Microscopy
[0214] Glomerular morphometry was performed on PAM-stained tissues. The glomerular surface area and the PAM-positive area to glomerular area (%) were measured using an image analyzer with a microscope (IPAP; Image Processor for Analytical Pathology; Sumitomo Chemical Co., Osaka, Japan) as described (A18-A20). For each animal, 50 glomeruli were analyzed.
Quantitation of Immunohistochemistry
[0215] PCNA: For quantitation of proliferating cells (PCNA positive cells), a blinded observer evaluated 50 glomeruli per specimen and mean values per glomerulus were calculated. pSmad1: To quantitate the expression of pSmad1, pSmad1 positive cells per glomerular cell were counted, and mean percentages of pSmad1 positive cells were calculated. Col4, Smad1 and pSTAT3: The area stained brown on an immunoperoxidase-stained section was selected for its color range, and the percentage of this area to total glomerular mesangial area was quantitated by using IPAP. In each animal, 50 glomeruli were evaluated.
Cell Culture Experiment
[0216] A glomerular mesangial cell strain was established from glomeruli isolated from normal, 4 week-old mice (C57BL/6J.times.SJL/J) according to the method previously described (A21). The mesangial cells were cultured in B medium (a 3:1 mixture of minimal essential medium/F12 modified with trace elements) supplemented with 1 mM glutamine, 100 units/ml penicillin, 100 mg/ml streptomycin, and 20% fetal calf serum (FCS). The cultured cells fulfilled the criteria generally accepted for glomerular mesangial cells (A22). The cultured mesangial cells in B medium/20% FCS were plated onto 100 mm dishes. After 24 hours of incubation, the cells were starved for two days in B medium/0.1% BSA, and cultured in B medium/2% FCS with 5 ng/ml PDGF-B (Calbiochem), then incubated with 100 ng/ml of APB5 or rat IgG (control) for 24 hours.
Cell Proliferation Test by BrdU ELISA
[0217] The proliferation of mesangial cells was also determined using a colorimetric immunoassay for the quantification of cell proliferation, based on the measurement of BrdU incorporation during DNA synthesis (Amersham Pharmacia Biotech Inc., NJ, USA). The BrdU ELISA was performed according to the manufacturer's instructions. Briefly, mesangial cells were plated at low density in 96-well flat-bottomed microtiter plates containing B medium/10% FCS and allowed to adhere overnight. The subconfluent cells were then starved for two days in B medium/0.1% BSA. 100 ng/ml of APB5 was then added to cells in B medium/2% FCS with 5 ng/ml of PDGF-B and 10 mM BrdU. After six hours of culture, plates were centrifuged and cells denatured with fixative solution then incubated for 30 min with 1:100 diluted anti-BrdU mAbs labeled with peroxidase. After removing the labeled antibody, substrate solution was added for 15 min and the reaction stopped by adding 1 M sulfuric acid. The absorbance was measured within 5 min at 450 nm with a reference wavelength at 690 nm using an ELISA plate reader (Model 550, Bio-Rad Laboratories, CA, USA). The blank corresponded to 100 .mu.l of culture medium without BrdU.
Western Blot Analysis
[0218] Cultured mesangial cells were starved for 24 hours in B medium/0.1% BSA. The cells were stimulated by 5 ng/ml of PDGF-BB with 100 ng/ml of APB5 or control IgG for 120 min. Cells were suspended in lysis buffer, resolved by SDS-polyacrylamide gel electrophoresis and transferred to nitro-cellulose membrane and subjected to Western blot using a 1:1000 dilution of anti-pSTAT3 antibody, 1:1000 dilution of anti-pSmad1 antibody and 1:2000 dilution of anti-Col4 antibody, followed by detection using an enhanced chemiluminescence detection system (Amersham Pharmacia).
Cell Transfection
[0219] Plasmid construct expression vectors of wild type STAT3 and dominant negative STAT3 were kindly provided by Jackie Bromberg (The Rockefeller Univ.) (A23). Mesangial cells (60 mm dish) were transfected with an expression vector encoding wild type STAT3 (8 mg) or dominant negative STAT3 (8 mg) by using Lipofectamine2000 (Invitrogen Life Technologies) according to the manufacturer's instructions. After 6 hr of transfection, medium was changed to growth medium (60% DMEM, 20% F12, 20% fetal calf serum). After 48 hr, cells were suspended in lysis buffer, and Western blot analysis was performed as previously described.
Statistical Analysis
[0220] All values were expressed as the mean.+-.SE and analyzed by Mann-Whitney nonparametric analysis, or one-way analysis of variance with a modified t-test. P values <0.05 were considered significant.
[0221] Statistical analyses of cell proliferation test and expression of Smad1 mRNA in cultured mesangial cells were performed by t-test. Quantitation of immunohistochemistry and expression of Smad1 mRNA in glomeruli were analyzed by one-way ANOVA followed by the post hoc test. P values <0.05 were considered significant. Data are expressed as means.+-.SD.
Experimental Results
Morphological Changes in Thy1 GN
[0222] In Thy1 GN, proliferation of mesangial cell begins at day 2, peaked at day 6, and subsides at day 12 after the injection. FIG. 9 shows a representative light microscopic picture at day 6 in each group. Thy1 GN group showed increase of the mesangium, which was peaked at day 6 (FIG. 9B). Proliferation of glomerular cells was assessed by immunostaining of PCNA. PCNA positive cells were markedly increased in Thy1 GN group, and peaked at day 6 (FIG. 9E).
[0223] Col4 is one of the main components of ECM in glomerulosclerosis. Col4 was weakly visible along the glomerular basement membrane and almost negative in the glomeruli in the normal control group (FIG. 9G). On the other hand, Thy1 GN group showed strong Col4 positive in the expanded mesangial area (FIG. 9H).
[0224] In Thy1 GN, both PDGF-B and PDGF .beta.-receptor were significantly positive in the glomeruli (FIG. 10). These findings indicate that excessive proliferation of mesangial cells, glomerular hypertrophy and glomerulosclerosis lesions occur coincidently in glomerulonephritis induced by anti-Thy1 antibody.
Anti-PDGF .beta.-Receptor Antibody Inhibits Both Glomerular Cell Proliferation and Glomerulosclerosis In Vivo
[0225] APB5 inhibits PDGF .beta.-R-mediated signaling pathways as described previously. Treatment with APB5 showed significant reduction in both glomerular cell number and glomerular PCNA positive cells in Thy1 GN at each point examined (FIG. 9C, 9F, 11A, 11B). Overexpression of PDGF-B chain and PDGF .beta.-R were significantly reduced after administration of APB5 (FIG. 10C, 10F). APB5 treatment also reduced mesangial matrix increase in Thy1 GN, which was assessed with the ratio of PAM-positive area to glomerular area (FIG. 11C). Col4 expression in mesangial cells in Thy1 GN was reduced by APB5 treatment (FIG. 11D). These data indicate that APB5 treatment can reduce both the mesangial cell proliferation and the mesangial matrix expansion in Thy1 GN.
Time Course of Expression of Smad1, Phosphor-Smad1 (pSmad1) and Phophor-STAT3 (pSTAT3) in Thy1 GN
[0226] The inventors examined the expression of Smad1 in the Thy1 GN rat kidney by immunostaining. Although Smad1 was hardly detected in healthy control glomeruli (FIG. 12A), a typically expanded mesangial pattern was observed in the glomeruli of Thy1 GN group at day 6 with high expression of Smad1 there (FIG. 12B). IPAP image analysis system was used to quantitate the expression of Smad1. The peak of glomerular Smad1 expression occurred at day 6 (FIG. 13A), which was consistent with the peak of mesangial cell proliferation. As shown in FIG. 12C, glomerular Smad1 expression declined rapidly after day 6.
[0227] Subsequently, the inventors examined whether or not the transcription and phosphorylation of Smad1 are occurring in Thy1 GN. As a result of immunohistochemistry, pSmad1 was hardly observed in healthy control group (FIG. 14A). However, in Thy1 GN group, pSmad1 was strongly positive in the nuclei (FIG. 14B). To quantitate the expression of pSmad1, pSmad1 positive cells per glomerulus were counted (FIG. 13B). Glomerular expression of pSmad1 was upregulated at day 1 of Thy1 GN and reached the peak at day 4, which was the early phase of mesangial cell proliferation.
[0228] Since PDGF-B and PDGF .beta.-R were upregulated in Thy1 GN and APB5 inhibited the overexpressions thereof, the inventors performed immunostaining of phosphorylated STAT3 which is a transcription factor of PDGF signaling pathway (A24). The expression of pSTAT3 was extensively increased in Thy1 GN (FIG. 15A, 15B, 15C), and peaked at day 6 (FIG. 13C).
[0229] APB5-treated groups had a significantly reduced expression of Smad1 and pSmad1 proteins in the glomeruli in Thy1 GN (FIG. 12D, 12E, 14D, 14E, 16A, 16B). Overexpression of pSTAT3 was also significantly reduced after administration of ABP5 at every point examined (FIG. 15D, 15E, 16C).
Effect of Anti-PDGF .beta.-R Antibody In Vitro
[0230] To determine whether or not APB5 inhibits the proliferation of mesangial cells, the inventors examined the proliferation of mesangial cells with or without APB5 by using BrdU ELISA system. As shown in FIG. 17A, addition of APB5 suppressed the PDGF-induced DNA synthesis in mesangial cells.
[0231] The inventors studied whether APB5 inhibits the expression of pSTAT3, pSmad1 and Col4 in mesangial cells stimulated by PDGF-B using Western blot analysis. APB5 reduced phosphorylation of STAT3 and Smad1 and the expression of Col4 (FIG. 17B).
Interaction Between STAT3 and Smad1
[0232] To elucidate the interaction between STAT3 and Smad1 that increases Col4 expression, a vector encoding dominant negative STAT3 was introduced into cultured mesangial cells.
[0233] The introduction of dominant negative STAT3 definitely reduced the expression of pSmad1 and Col4 compared with the introduction of wild type STAT3 (FIG. 18).
DISCUSSION
[0234] Many glomerular disorders are characterized by both mesangial cell proliferation and progressive glomerulosclerosis. However, mechanisms common for both of these important pathological findings have not been elucidated to date. This study demonstrated for the first time that activation of STAT3 and Smad1 is in a key pathway for regulating the interaction between the two critical events of progressive glomerular disorders. These results support a new direction of research about the pathogenesis and its therapeutical approach for chronic glomerulonephritis and diabetic nephropathy which are major problems in the 21st century in the world.
[0235] Glomerulosclerosis is a pathological feature seen in progressive glomerular disorders including chronic glomerulonephritis, IgA nephropathy and diabetic nephropathy. Glomerular cell proliferation occurs at an early stage in a number of glomerular diseases and subsequently glomerulosclerosis develops, which eventually progresses end stage glomerular disorders (A1, A2). Examples of this process are seen in IgA nephropathy, membranoproliferative glomerulonephritis, diabetic nephropathy, and light chain systemic diseases in human as well as in animal models such as Thy1 GN rat renal ablation model and so on (A25, A26). Inhibiting glomerular cell proliferation with anti-PDGF antibody (A7), anti-coagulant heparin (A27) or vitamin D analogue (A19) demonstrated to abolish the subsequent development of progressive glomerulosclerosis, but the mechanism has been unclear. In this study, the inventors have demonstrated the possible mechanism regulating the interaction between mesangial cell proliferation and glomerulosclerosis for these pathological processes.
[0236] A receptor for PDGF has been identified in murine and human mesangial cells (A28). PDGF is a potent, key mitogen for mesangial cells, and is constitutively synthesized as an autocrine cell growth factor in these cells in vitro (A28, A29). PDGF plays an important role for the progress of pathological conditions including glomerulonephritis, diabetic nephropathy and progressive glomerulosclerosis in vitro and in vivo (A3, A4). It has been previously reported that activation of PDGF receptor tyrosine kinase induces tyrosine phosphorylation of STAT3 proteins (A30, A31). The activation is associated with growth regulation and differentiation (A32, A33). The inventors have demonstrated that the overexpression of phosphorylated STAT3 has been identified associated with increased expressions of both PDGF and its .beta.-receptor in vivo and in vitro, and that APB5 has ameliorated glomerulonephritis by reducing the expression of PDGF, its .beta.-receptor and STAT3 in vivo and in vitro.
[0237] Glomerulosclerosis is characterized mainly by increase in the amount of ECM in the mesangium. One of the major components of glomerulosclerosis is Col4 (A34). The inventors have recently reported that Smad1 is a key transcriptional factor for regulating Col4 expression in diabetic nephropathy in vitro and in vivo (A8). The inventors have demonstrated that phosphorylated Smad1 is strongly expressed in parallel with the upregulation of Col4 expression and the increase in the amount of glomerular ECM. These findings elucidate that Smad1 plays a critical role not only in glomerulosclerosis in diabetic nephropathy but also in glomerulonephritis. This study has also shown that PDGF induces expression of phosphorylated Smad1 in the glomeruli in vitro and in vivo.
[0238] The inventors confirmed that the interaction between STAT3 and Smad1 regulates a gene critical for glomerulosclerosis. Introduction of dominant negative STAT3 decreased the expression of Col4 significantly in cultured mesangial cells. Activation of STAT3 and activation of Smad1 seem to be independent but both factors were activated by PDGF. Furthermore, since introduction of dominant negative STAT3 partially reduced phosphorylation of Smad1, activation of Smad1 seems to be a part of the mechanism of activating SMAT3. These findings suggest that, in experimental glomerulonephritis, PDGF-induced STAT3 activation interacts with overexpression of Smad1, which is followed by activation of Col4. To understand both signaling pathways is essential for elucidating the pathological process of progressive glomerular disorders.
[0239] Therapeutical approach for sclerosis in diverse organs is currently limited to supportive therapy to slow the loss of function of these organs. The findings of the present inventors offer insights into the nature of even other proliferative diseases that lead to sclerosis. Since both Smad1 and STAT3 are nearly absent in normal glomeruli, blocking Smad1 and/or STAT3 signals may be beneficial to inhibit the progress of various renal diseases leading to sclerosis, by inhibiting the pathologically activated cell proliferation and production of ECM.
Example 3
[0240] Urine samples from five patients with diabetic nephropathy, one patient with diabetes complicated with sclerosing nephritis, two patients with diabetes complicated with non-sclerosing nephritis, and two healthy persons were subjected to SDS-polyacrylamide gel electrophoresis, followed by blotting on nitrocellulose membrane. Western blotting was performed using anti-Smad1 antibody (Santa Cruz Biotechnology) and anti-ALK1 antibody as primary antibodies and Western Breeze kit (Invitrogen, Tokyo, Japan).
[0241] Urine samples taken from one inpatient with diabetic nephropathy prior to treatment and one week after start of the treatment were subjected to Western blotting in the same manner, using anti-ALK1 antibody as a primary antibody.
[0242] While Smad1 and ALK1 were detected in urine samples from patients with diabetic nephropathy and patient with glomerulosclerosis in the kidney, they were not detected in urine samples from normal persons and nephritis patients without glomerulosclerosis (FIGS. 17 and 19). The amount of ALK1 excreted into urine decreased in a time-dependent manner as treatment of diabetic nephropathy progressed (FIG. 18).
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[0283] A6. Floege, J., Burns, M. W., Alpers, C. E., Yoshimura, A., Pritzl, P., Gordon, K., Seifert, R. A., Bowen-Pope, D. F., Couser, W. G., and Johnson, R. J.: Glomerular cell proliferation and PDGF expression precede glomerulosclerosis in the remnant kidney model. Kidney Int. 41: 297-309, 1992
[0284] A7. Johnson, R. J., Raines, E. W., Floege, J, et al: Inhibition of mesangial cell proliferation and matrix expansion in glomerulonephritis in the rat by antibody to platelet-derived growth factor. J Exp Med 175: 1413-1416, 1992
[0285] A8. Abe, H., Matsubara, T., Iehara, N., Nagai, K., Takahashi, T., Arai, H., Kita, T., and Doi, T. Type IV collagen is transcriptionally regulated by Smad1 under advanced glycation end-products (AGEs) stimulation. (2004) J. Biol. Chem. 2004
[0286] A9. Yang X, Ji X, Shi X, Cao X. Smad1 domains interacting with Hoxc-8 induce osteoblast differentiation. J Biol Chem. 2000 Jan. 14; 275(2): 1065-72.
[0287] A10. Katagiri T, Imada M, Yanai T, Suda T, Takahashi N, Kamijo R. Identification of a BMP-responsive element in Id1, the gene for inhibition of myogenesis. Genes Cells. 2002 September; 7(9):949-60.
[0288] A11. Liu Z, Shi W, Ji X, Sun C, Jee W S, Wu Y, Mao Z, Nagy T R, Li Q, Cao X. Molecules mimicking Smad1 interacting with Hox stimulate bone formation. J Biol Chem. 2004 Mar. 19; 279(12):11313-9.
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[0291] A14. Nakashima K, Yanagisawa M, Arakawa H, Kimura N, Hisatsune T, Kawabata M, Miyazono K, Taga T. Synergistic signaling in fetal brain by STAT3-Smad1 complex bridged by p300. Science. 1999 Apr. 16; 284(5413):479-82.
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[0294] A17. Sano H, Ueda Y, Takakura N, Takemura G, Doi T, Kataoka H, Murayama T, Xu Y, Sudo T, Nishikawa S, Nishikawa S, Fujiwara H, Kita T, Yokode M: Blockade of platelet-derived growth factor receptor-beta pathway induces apoptosis of vascular endothelial cells and disrupts glomerular capillary formation in neonatal mice. Am J Pathol 2002, 161:135-143.
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[0312] A34. Floege J, Johnson R J, Gordon K, Iida H, Pritzl P, Yoshimura A, Campbell C, Alpers C E, Couser W G. Increased synthesis of extracellular matrix in mesangial proliferative nephritis. Kidney Int. 1991 September; 40(3):477-88.
[0313] All publications, patents and patent applications cited herein are incorporated herein by reference in their entirety.
INDUSTRIAL APPLICABILITY
[0314] According to the present invention, Smad1 has been identified as a substance directly involved in the overproduction of type IV collagen and shown to have a critical role as a causative of diabetic nephropathy. With this finding, it has become possible to detect diabetic nephropathy; and there have been provided a prophylactic and/or therapeutic agent for diabetic nephropathy, a drug inhibiting the increase of extracellular matrix, and a drug inhibiting the expression of .alpha.1 type IV collagen. Further, according to the present invention, there have been provided a method and a kit for identifying substances effective in preventing and/or treating diabetic nephropathy, a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix, and a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen.
[0315] According to the present invention, it has been demonstrated that activation of STAT3 and Smad1 is in a key pathway for regulating the interaction between the two critical events (i.e., cell proliferation and glomerulosclerosis) in progressive glomerular disorders. With this finding, it has become possible to detect proliferative diseases causing sclerosis; and there have been provided a prophylactic and/or therapeutic agent for proliferative diseases causing sclerosis, a drug inhibiting the increase of extracellular matrix, and a drug inhibiting the expression of .alpha.1 type IV collagen. Further, according to the present invention, there have been provided a method and a kit for identifying substances effective in preventing and/or treating proliferative diseases causing sclerosis, a method and a kit for identifying substances effective in inhibiting the increase of extracellular matrix, and a method and a kit for identifying substances effective in inhibiting the expression of .alpha.1 type IV collagen.
SEQUENCE LISTING FREE TEXT
<SEQ ID NO: 1>
[0316] SEQ ID NO: 1 shows the nucleotide sequence of the mRNA of human-derived Smad1.
<SEQ ID NO: 2>
[0317] SEQ ID NO: 2 shows the nucleotide sequence of the mRNA of human-derived ALK1.
<SEQ ID NO: 3>
[0318] SEQ ID NO: 3 shows the nucleotide sequence of the mRNA of human-derived BMP2.
<SEQ ID NO: 4>
[0319] SEQ ID NO: 4 shows the nucleotide sequence of the mRNA of human-derived BMP4.
<SEQ ID NO: 5>
[0320] SEQ ID NO: 5 shows the nucleotide sequence of the forward primer used in RT-PCR for specifically amplifying the mRNA of Smad1.
<SEQ ID NO: 6>
[0321] SEQ ID NO: 6 shows the nucleotide sequence of the reverse primer used in RT-PCR for specifically amplifying the mRNA of Smad1.
<SEQ ID NO: 7>
[0322] SEQ ID NO: 7 shows the nucleotide sequence of the forward primer used in RT-PCR for specifically amplifying the mRNA of ALK1.
<SEQ ID NO: 8>
[0323] SEQ ID NO: 8 shows the nucleotide sequence of the reverse primer used in RT-PCR for specifically amplifying the mRNA of ALK1.
<SEQ ID NO: 9>
[0324] SEQ ID NO: 9 shows the nucleotide sequence of the forward primer used in RT-PCR for specifically amplifying the mRNA of BMP2.
<SEQ ID NO: 10>
[0325] SEQ ID NO: 10 shows the nucleotide sequence of the reverse primer used in RT-PCR for specifically amplifying the mRNA of BMP2.
<SEQ ID NO: 11>
[0326] SEQ ID NO: 11 shows the nucleotide sequence of the forward primer used in RT-PCR for specifically amplifying the mRNA of BMP4.
<SEQ ID NO: 12>
[0327] SEQ ID NO: 12 shows the nucleotide sequence of the reverse primer used in RT-PCR for specifically amplifying the mRNA of BMP4.
<SEQ ID NO: 13>
[0328] SEQ ID NO: 13 shows the nucleotide sequence of an antisense oligonucleotide to Smad1.
<SEQ ID NO: 14>
[0329] SEQ ID NO: 14 shows the nucleotide sequence of the 27 bp tandem repeat sequence of mouse-derived Col4 gene.
<SEQ ID NO: 15>
[0330] SEQ ID NO: 15 shows the nucleotide sequence of the 5' primer used in ChIP assay.
<SEQ ID NO: 16>
[0331] SEQ ID NO: 16 shows the nucleotide sequence of the 3' primer used in ChIP assay.
<SEQ ID NO: 17>
[0332] SEQ ID NO: 17 shows the nucleotide sequence of the probe used in RNase protection assay.
<SEQ ID NO: 18>
[0333] SEQ ID NO: 18 shows the nucleotide sequence of a synthetic oligonucleotide.
<SEQ ID NO: 19>
[0334] SEQ ID NO: 19 shows the nucleotide sequence of the mRNA of human-derived STAT3.
<SEQ ID NO: 20>
[0335] SEQ ID NO: 20 shows the nucleotide sequence of the mRNA of human-derived ALK3.
<SEQ ID NO: 21>
[0336] SEQ ID NO: 21 shows the nucleotide sequence of the forward primer used in RT-PCR for specifically amplifying the mRNA of human-derived STAT3.
<SEQ ID NO: 22>
[0337] SEQ ID NO: 22 shows the nucleotide sequence of the reverse primer used in RT-PCR for specifically amplifying the mRNA of human-derived STAT3.
<SEQ ID NO: 23>
[0338] SEQ ID NO: 23 shows the nucleotide sequence of the forward primer used in RT-PCR for specifically amplifying the mRNA of human-derived ALK3.
<SEQ ID NO: 24>
[0339] SEQ ID NO: 24 shows the nucleotide sequence of the reverse primer used in RT-PCR for specifically amplifying the mRNA of human-derived ALK3.
<SEQ ID NO: 25>
[0340] SEQ ID NO: 25 shows the encoded amino acid sequence of SEQ ID NO: 1.
<SEQ ID NO: 26>
[0341] SEQ ID NO: 26 shows the encoded amino acid sequence of SEQ ID NO: 2.
<SEQ ID NO: 27>
[0342] SEQ ID NO: 27 shows the encoded amino acid sequence of SEQ ID NO: 3.
<SEQ ID NO: 28>
[0343] SEQ ID NO: 28 shows the encoded amino acid sequence of SEQ ID NO: 4.
<SEQ ID NO: 29>
[0344] SEQ ID NO: 29 shows the encoded amino acid sequence of SEQ ID NO: 19.
<SEQ ID NO: 30>
[0345] SEQ ID NO: 30 shows the encoded amino acid sequence of SEQ ID NO: 20.
Sequence CWU
1
1
3011990DNAHomo sapiensCDS(433)..(1830) 1gaattccggg ggtattggca gctgaggagt
ggaggctggg cagctccgac tccctgacgc 60cagcgcgacc agatcaatcc aggctccagg
agaaagcagg cgggcgggcg gagaaaggag 120aggccgagcg gctcaacccg ggccgaggct
cggggagcgg agagtggcgc accgcccggc 180cgtccggacc cgggccgcga gaccccgctc
gcccggccac tcgtgctccc gcacggacgg 240gcgcgccgcc aacccggtgc tgactgggtt
acttttttaa acactaggaa tggtaatttc 300tactcttctg gacttcaaac taagaagtta
aagagacttc tctgtaaata aacaaatctc 360ttctgctgtc cttttgcatt tggagacagc
tttatttcac catatccaag gagtataact 420agtgctgtca tt atg aat gtg aca agt
tta ttt tcc ttt aca agt cca gct 471 Met Asn Val Thr Ser
Leu Phe Ser Phe Thr Ser Pro Ala 1 5
10 gtg aag aga ctt ctt ggg tgg aaa cag ggc gat gaa gaa
gaa aaa tgg 519Val Lys Arg Leu Leu Gly Trp Lys Gln Gly Asp Glu Glu
Glu Lys Trp 15 20 25
gca gag aaa gct gtt gat gct ttg gtg aaa aaa ctg aag aaa aag aaa
567Ala Glu Lys Ala Val Asp Ala Leu Val Lys Lys Leu Lys Lys Lys Lys30
35 40 45ggt gcc atg gag gaa
ctg gaa aag gcc ttg agc tgc cca ggg caa ccg 615Gly Ala Met Glu Glu
Leu Glu Lys Ala Leu Ser Cys Pro Gly Gln Pro 50
55 60 agt aac tgt gtc acc att ccc cgc tct ctg
gat ggc agg ctg caa gtc 663Ser Asn Cys Val Thr Ile Pro Arg Ser Leu
Asp Gly Arg Leu Gln Val 65 70
75 tcc cac cgg aag gga ctg cct cat gtc att tac tgc cgt gtg tgg
cgc 711Ser His Arg Lys Gly Leu Pro His Val Ile Tyr Cys Arg Val Trp
Arg 80 85 90 tgg ccc
gat ctt cag agc cac cat gaa cta aaa cca ctg gaa tgc tgt 759Trp Pro
Asp Leu Gln Ser His His Glu Leu Lys Pro Leu Glu Cys Cys 95
100 105 gag ttt cct ttt ggt tcc aag
cag aag gag gtc tgc atc aat ccc tac 807Glu Phe Pro Phe Gly Ser Lys
Gln Lys Glu Val Cys Ile Asn Pro Tyr110 115
120 125cac tat aag aga gta gaa agc cct gta ctt cct cct
gtg ctg gtt cca 855His Tyr Lys Arg Val Glu Ser Pro Val Leu Pro Pro
Val Leu Val Pro 130 135
140 aga cac agc gaa tat aat cct cag cac agc ctc tta gct cag ttc cgt
903Arg His Ser Glu Tyr Asn Pro Gln His Ser Leu Leu Ala Gln Phe Arg
145 150 155 aac tta gga caa
aat gag cct cac atg cca ctc aac gcc act ttt cca 951Asn Leu Gly Gln
Asn Glu Pro His Met Pro Leu Asn Ala Thr Phe Pro 160
165 170 gat tct ttc cag caa ccc aac agc cac
ccg ttt cct cac tct ccc aat 999Asp Ser Phe Gln Gln Pro Asn Ser His
Pro Phe Pro His Ser Pro Asn 175 180
185 agc agt tac cca aac tct cct ggg agc agc agc agc acc
tac cct cac 1047Ser Ser Tyr Pro Asn Ser Pro Gly Ser Ser Ser Ser Thr
Tyr Pro His190 195 200
205tct ccc acc agc tca gac cca gga agc cct ttc cag atg cca gct gat
1095Ser Pro Thr Ser Ser Asp Pro Gly Ser Pro Phe Gln Met Pro Ala Asp
210 215 220 acg ccc cca cct
gct tac ctg cct cct gaa gac ccc atg acc cag gat 1143Thr Pro Pro Pro
Ala Tyr Leu Pro Pro Glu Asp Pro Met Thr Gln Asp 225
230 235 ggc tct cag ccg atg gac aca aac atg
atg gcg cct ccc ctg ccc tca 1191Gly Ser Gln Pro Met Asp Thr Asn Met
Met Ala Pro Pro Leu Pro Ser 240 245
250 gaa atc aac aga gga gat gtt cag gcg gtt gct tat gag gaa
cca aaa 1239Glu Ile Asn Arg Gly Asp Val Gln Ala Val Ala Tyr Glu Glu
Pro Lys 255 260 265 cac
tgg tgc tct att gtc tac tat gag ctc aac aat cgt gtg ggt gaa 1287His
Trp Cys Ser Ile Val Tyr Tyr Glu Leu Asn Asn Arg Val Gly Glu270
275 280 285gcg ttc cat gcc tcc tcc
aca agt gtg ttg gtg gat ggt ttc act gat 1335Ala Phe His Ala Ser Ser
Thr Ser Val Leu Val Asp Gly Phe Thr Asp 290
295 300 cct tcc aac aat aag aac cgt ttc tgc ctt ggg
ctg ctc tcc aat gtt 1383Pro Ser Asn Asn Lys Asn Arg Phe Cys Leu Gly
Leu Leu Ser Asn Val 305 310
315 aac cgg aat tcc act att gaa aac acc agg cgg cat att gga aaa
gga 1431Asn Arg Asn Ser Thr Ile Glu Asn Thr Arg Arg His Ile Gly Lys
Gly 320 325 330 gtt cat
ctt tat tat gtt gga ggg gag gtg tat gcc gaa tgc ctt agt 1479Val His
Leu Tyr Tyr Val Gly Gly Glu Val Tyr Ala Glu Cys Leu Ser 335
340 345 gac agt agc atc ttt gtg caa
agt cgg aac tgc aac tac cat cat gga 1527Asp Ser Ser Ile Phe Val Gln
Ser Arg Asn Cys Asn Tyr His His Gly350 355
360 365ttt cat cct act act gtt tgc aag atc cct agt ggg
tgt agt ctg aaa 1575Phe His Pro Thr Thr Val Cys Lys Ile Pro Ser Gly
Cys Ser Leu Lys 370 375
380 att ttt aac aac caa gaa ttt gct cag tta ttg gca cag tct gtg aac
1623Ile Phe Asn Asn Gln Glu Phe Ala Gln Leu Leu Ala Gln Ser Val Asn
385 390 395 cat gga ttt gag
aca gtc tat gag ctt aca aaa atg tgt act ata cgt 1671His Gly Phe Glu
Thr Val Tyr Glu Leu Thr Lys Met Cys Thr Ile Arg 400
405 410 atg agc ttt gtg aag ggc tgg gga gca
gaa tac cac cgc cag gat gtt 1719Met Ser Phe Val Lys Gly Trp Gly Ala
Glu Tyr His Arg Gln Asp Val 415 420
425 act agc acc ccc tgc tgg att gag ata cat ctg cac ggc
ccc ctc cag 1767Thr Ser Thr Pro Cys Trp Ile Glu Ile His Leu His Gly
Pro Leu Gln430 435 440
445tgg ctg gat aaa gtt ctt act caa atg ggt tca cct cat aat cct att
1815Trp Leu Asp Lys Val Leu Thr Gln Met Gly Ser Pro His Asn Pro Ile
450 455 460 tca tct gta tct
taa atggccccag catctgcctc tggaaaacta ttgagccttg 1870Ser Ser Val Ser
465
catgtacttg aaggatggat gagtcagaca
cgattgagaa ctgacaaagg agccttgata 1930atacttgacc tctgtgacca actgttggat
tcagaaattt aaacaaaaaa aaaaaaaaaa 199021970DNAHomo
sapiensCDS(283)..(1794) 2aggaaacggt ttattaggag ggagtggtgg agctgggcca
ggcaggaaga cgctggaata 60agaaacattt ttgctccagc ccccatccca gtcccgggag
gctgccgcgc cagctgcgcc 120gagcgagccc ctccccggct ccagcccggt ccggggccgc
gccggacccc agcccgccgt 180ccagcgctgg cggtgcaact gcggccgcgc ggtggagggg
aggtggcccc ggtccgccga 240aggctagcgc cccgccaccc gcagagcggg cccagaggga
cc atg acc ttg ggc 294
Met Thr Leu Gly 1
tcc ccc agg aaa ggc ctt ctg atg ctg ctg atg gcc ttg gtg acc cag
342Ser Pro Arg Lys Gly Leu Leu Met Leu Leu Met Ala Leu Val Thr Gln5
10 15 20gga gac cct gtg aag
ccg tct cgg ggc ccg ctg gtg acc tgc acg tgt 390Gly Asp Pro Val Lys
Pro Ser Arg Gly Pro Leu Val Thr Cys Thr Cys 25
30 35 gag agc cca cat tgc aag ggg cct acc tgc
cgg ggg gcc tgg tgc aca 438Glu Ser Pro His Cys Lys Gly Pro Thr Cys
Arg Gly Ala Trp Cys Thr 40 45
50 gta gtg ctg gtg cgg gag gag ggg agg cac ccc cag gaa cat cgg
ggc 486Val Val Leu Val Arg Glu Glu Gly Arg His Pro Gln Glu His Arg
Gly 55 60 65 tgc ggg
aac ttg cac agg gag ctc tgc agg ggg cgc ccc acc gag ttc 534Cys Gly
Asn Leu His Arg Glu Leu Cys Arg Gly Arg Pro Thr Glu Phe 70
75 80 gtc aac cac tac tgc tgc gac
agc cac ctc tgc aac cac aac gtg tcc 582Val Asn His Tyr Cys Cys Asp
Ser His Leu Cys Asn His Asn Val Ser85 90
95 100ctg gtg ctg gag gcc acc caa cct cct tcg gag cag
ccg gga aca gat 630Leu Val Leu Glu Ala Thr Gln Pro Pro Ser Glu Gln
Pro Gly Thr Asp 105 110
115 ggc cag ctg gcc ctg atc ctg ggc ccc gtg ctg gcc ttg ctg gcc ctg
678Gly Gln Leu Ala Leu Ile Leu Gly Pro Val Leu Ala Leu Leu Ala Leu
120 125 130 gtg gcc ctg ggt
gtc ctg ggc ctg tgg cat gtc cga cgg agg cag gag 726Val Ala Leu Gly
Val Leu Gly Leu Trp His Val Arg Arg Arg Gln Glu 135
140 145 aag cag cgt ggc ctg cac agc gag ctg
gga gag tcc agt ctc atc ctg 774Lys Gln Arg Gly Leu His Ser Glu Leu
Gly Glu Ser Ser Leu Ile Leu 150 155
160 aaa gca tct gag cag ggc gac acg atg ttg ggg gac ctc
ctg gac agt 822Lys Ala Ser Glu Gln Gly Asp Thr Met Leu Gly Asp Leu
Leu Asp Ser165 170 175
180gac tgc acc aca ggg agt ggc tca ggg ctc ccc ttc ctg gtg cag agg
870Asp Cys Thr Thr Gly Ser Gly Ser Gly Leu Pro Phe Leu Val Gln Arg
185 190 195 aca gtg gca cgg
cag gtt gcc ttg gtg gag tgt gtg gga aaa ggc cgc 918Thr Val Ala Arg
Gln Val Ala Leu Val Glu Cys Val Gly Lys Gly Arg 200
205 210 tat ggc gaa gtg tgg cgg ggc ttg tgg
cac ggt gag agt gtg gcc gtc 966Tyr Gly Glu Val Trp Arg Gly Leu Trp
His Gly Glu Ser Val Ala Val 215 220
225 aag atc ttc tcc tcg agg gat gaa cag tcc tgg ttc cgg gag
act gag 1014Lys Ile Phe Ser Ser Arg Asp Glu Gln Ser Trp Phe Arg Glu
Thr Glu 230 235 240 atc
tat aac aca gta ttg ctc aga cac gac aac atc cta ggc ttc atc 1062Ile
Tyr Asn Thr Val Leu Leu Arg His Asp Asn Ile Leu Gly Phe Ile245
250 255 260gcc tca gac atg acc tcc
cgc aac tcg agc acg cag ctg tgg ctc atc 1110Ala Ser Asp Met Thr Ser
Arg Asn Ser Ser Thr Gln Leu Trp Leu Ile 265
270 275 acg cac tac cac gag cac ggc tcc ctc tac gac
ttt ctg cag aga cag 1158Thr His Tyr His Glu His Gly Ser Leu Tyr Asp
Phe Leu Gln Arg Gln 280 285
290 acg ctg gag ccc cat ctg gct ctg agg cta gct gtg tcc gcg gca
tgc 1206Thr Leu Glu Pro His Leu Ala Leu Arg Leu Ala Val Ser Ala Ala
Cys 295 300 305 ggc ctg
gcg cac ctg cac gtg gag atc ttc ggt aca cag ggc aaa cca 1254Gly Leu
Ala His Leu His Val Glu Ile Phe Gly Thr Gln Gly Lys Pro 310
315 320 gcc att gcc cac cgc gac ttc
aag agc cgc aat gtg ctg gtc aag agc 1302Ala Ile Ala His Arg Asp Phe
Lys Ser Arg Asn Val Leu Val Lys Ser325 330
335 340aac ctg cag tgt tgc atc gcc gac ctg ggc ctg gct
gtg atg cac tca 1350Asn Leu Gln Cys Cys Ile Ala Asp Leu Gly Leu Ala
Val Met His Ser 345 350
355 cag ggc agc gat tac ctg gac atc ggc aac aac ccg aga gtg ggc acc
1398Gln Gly Ser Asp Tyr Leu Asp Ile Gly Asn Asn Pro Arg Val Gly Thr
360 365 370 aag cgg tac atg
gca ccc gag gtg ctg gac gag cag atc cgc acg gac 1446Lys Arg Tyr Met
Ala Pro Glu Val Leu Asp Glu Gln Ile Arg Thr Asp 375
380 385 tgc ttt gag tcc tac aag tgg act gac
atc tgg gcc ttt ggc ctg gtg 1494Cys Phe Glu Ser Tyr Lys Trp Thr Asp
Ile Trp Ala Phe Gly Leu Val 390 395
400 ctg tgg gag att gcc cgc cgg acc atc gtg aat ggc atc
gtg gag gac 1542Leu Trp Glu Ile Ala Arg Arg Thr Ile Val Asn Gly Ile
Val Glu Asp405 410 415
420tat aga cca ccc ttc tat gat gtg gtg ccc aat gac ccc agc ttt gag
1590Tyr Arg Pro Pro Phe Tyr Asp Val Val Pro Asn Asp Pro Ser Phe Glu
425 430 435 gac atg aag aag
gtg gtg tgt gtg gat cag cag acc ccc acc atc cct 1638Asp Met Lys Lys
Val Val Cys Val Asp Gln Gln Thr Pro Thr Ile Pro 440
445 450 aac cgg ctg gct gca gac ccg gtc ctc
tca ggc cta gct cag atg atg 1686Asn Arg Leu Ala Ala Asp Pro Val Leu
Ser Gly Leu Ala Gln Met Met 455 460
465 cgg gag tgc tgg tac cca aac ccc tct gcc cga ctc acc gcg
ctg cgg 1734Arg Glu Cys Trp Tyr Pro Asn Pro Ser Ala Arg Leu Thr Ala
Leu Arg 470 475 480 atc
aag aag aca cta caa aaa att agc aac agt cca gag aag cct aaa 1782Ile
Lys Lys Thr Leu Gln Lys Ile Ser Asn Ser Pro Glu Lys Pro Lys485
490 495 500gtg att caa tag
cccaggagca cctgattcct ttctgcctgc agggggctgg 1834Val Ile Gln
gggggtgggg ggcagtggat ggtgccctat
ctgggtagag gtagtgtgag tgtggtgtgt 1894gctggggatg ggcagctgcg cctgcctgct
cggcccccag cccacccagc caaaaataca 1954gctgggctga aacctg
197031547DNAHomo sapiensCDS(324)..(1514)
3ggggacttct tgaacttgca gggagaataa cttgcgcacc ccactttgcg ccggtgcctt
60tgccccagcg gagcctgctt cgccatctcc gagccccacc gcccctccac tcctcggcct
120tgcccgacac tgagacgctg ttcccagcgt gaaaagagag actgcgcggc cggcacccgg
180gagaaggagg aggcaaagaa aaggaacgga cattcggtcc ttgcgccagg tcctttgacc
240agagtttttc catgtggacg ctctttcaat ggacgtgtcc ccgcgtgctt cttagacgga
300ctgcggtctc ctaaaggtcg acc atg gtg gcc ggg acc cgc tgt ctt cta gcg
353 Met Val Ala Gly Thr Arg Cys Leu Leu Ala
1 5 10ttg ctg ctt
ccc cag gtc ctc ctg ggc ggc gcg gct ggc ctc gtt ccg 401Leu Leu Leu
Pro Gln Val Leu Leu Gly Gly Ala Ala Gly Leu Val Pro 15
20 25 gag ctg ggc cgc agg aag ttc gcg
gcg gcg tcg tcg ggc cgc ccc tca 449Glu Leu Gly Arg Arg Lys Phe Ala
Ala Ala Ser Ser Gly Arg Pro Ser 30 35
40 tcc cag ccc tct gac gag gtc ctg agc gag ttc gag ttg
cgg ctg ctc 497Ser Gln Pro Ser Asp Glu Val Leu Ser Glu Phe Glu Leu
Arg Leu Leu 45 50 55
agc atg ttc ggc ctg aaa cag aga ccc acc ccc agc agg gac gcc gtg
545Ser Met Phe Gly Leu Lys Gln Arg Pro Thr Pro Ser Arg Asp Ala Val 60
65 70 gtg ccc ccc tac atg
cta gac ctg tat cgc agg cac tca ggt cag ccg 593Val Pro Pro Tyr Met
Leu Asp Leu Tyr Arg Arg His Ser Gly Gln Pro75 80
85 90ggc tca ccc gcc cca gac cac cgg ttg gag
agg gca gcc agc cga gcc 641Gly Ser Pro Ala Pro Asp His Arg Leu Glu
Arg Ala Ala Ser Arg Ala 95 100
105 aac act gtg cgc agc ttc cac cat gaa gaa tct ttg gaa gaa cta
cca 689Asn Thr Val Arg Ser Phe His His Glu Glu Ser Leu Glu Glu Leu
Pro 110 115 120 gaa acg
agt ggg aaa aca acc cgg aga ttc ttc ttt aat tta agt tct 737Glu Thr
Ser Gly Lys Thr Thr Arg Arg Phe Phe Phe Asn Leu Ser Ser 125
130 135 atc ccc acg gag gag ttt atc
acc tca gca gag ctt cag gtt ttc cga 785Ile Pro Thr Glu Glu Phe Ile
Thr Ser Ala Glu Leu Gln Val Phe Arg 140 145
150 gaa cag atg caa gat gct tta gga aac aat agc agt
ttc cat cac cga 833Glu Gln Met Gln Asp Ala Leu Gly Asn Asn Ser Ser
Phe His His Arg155 160 165
170att aat att tat gaa atc ata aaa cct gca aca gcc aac tcg aaa ttc
881Ile Asn Ile Tyr Glu Ile Ile Lys Pro Ala Thr Ala Asn Ser Lys Phe
175 180 185 ccc gtg acc aga
ctt ttg gac acc agg ttg gtg aat cag aat gca agc 929Pro Val Thr Arg
Leu Leu Asp Thr Arg Leu Val Asn Gln Asn Ala Ser 190
195 200 agg tgg gaa agt ttt gat gtc acc ccc
gct gtg atg cgg tgg act gca 977Arg Trp Glu Ser Phe Asp Val Thr Pro
Ala Val Met Arg Trp Thr Ala 205 210
215 cag gga cac gcc aac cat gga ttc gtg gtg gaa gtg gcc cac
ttg gag 1025Gln Gly His Ala Asn His Gly Phe Val Val Glu Val Ala His
Leu Glu 220 225 230 gag
aaa caa ggt gtc tcc aag aga cat gtt agg ata agc agg tct ttg 1073Glu
Lys Gln Gly Val Ser Lys Arg His Val Arg Ile Ser Arg Ser Leu235
240 245 250cac caa gat gaa cac agc
tgg tca cag ata agg cca ttg cta gta act 1121His Gln Asp Glu His Ser
Trp Ser Gln Ile Arg Pro Leu Leu Val Thr 255
260 265 ttt ggc cat gat gga aaa ggg cat cct ctc cac
aaa aga gaa aaa cgt 1169Phe Gly His Asp Gly Lys Gly His Pro Leu His
Lys Arg Glu Lys Arg 270 275
280 caa gcc aaa cac aaa cag cgg aaa cgc ctt aag tcc agc tgt aag
aga 1217Gln Ala Lys His Lys Gln Arg Lys Arg Leu Lys Ser Ser Cys Lys
Arg 285 290 295 cac cct
ttg tac gtg gac ttc agt gac gtg ggg tgg aat gac tgg att 1265His Pro
Leu Tyr Val Asp Phe Ser Asp Val Gly Trp Asn Asp Trp Ile 300
305 310 gtg gct ccc ccg ggg tat cac
gcc ttt tac tgc cac gga gaa tgc cct 1313Val Ala Pro Pro Gly Tyr His
Ala Phe Tyr Cys His Gly Glu Cys Pro315 320
325 330ttt cct ctg gct gat cat ctg aac tcc act aat cat
gcc att gtt cag 1361Phe Pro Leu Ala Asp His Leu Asn Ser Thr Asn His
Ala Ile Val Gln 335 340
345 acg ttg gtc aac tct gtt aac tct aag att cct aag gca tgc tgt gtc
1409Thr Leu Val Asn Ser Val Asn Ser Lys Ile Pro Lys Ala Cys Cys Val
350 355 360 ccg aca gaa ctc
agt gct atc tcg atg ctg tac ctt gac gag aat gaa 1457Pro Thr Glu Leu
Ser Ala Ile Ser Met Leu Tyr Leu Asp Glu Asn Glu 365
370 375 aag gtt gta tta aag aac tat cag gac
atg gtt gtg gag ggt tgt ggg 1505Lys Val Val Leu Lys Asn Tyr Gln Asp
Met Val Val Glu Gly Cys Gly 380 385
390 tgt cgc tag tacagcaaaa ttaaatacat aaatatatat ata
1547Cys Arg 395
41999DNAHomo
sapiensCDS(478)..(1704) 4gagggagggg ccgccgggga agaggaggag gaaggaaaga
aagaaagcga gggagggaaa 60gaggaggaag gaagatgcga gaaggcagag gaggagggag
ggagggaagg agcgcggagc 120ccggcccgga agctaggtga gtgtggcatc cgagctgagg
gacgcgagcc tgagacgccg 180ctgctgctcc ggctgagtat ctagcttgtc tccccgatgg
gattcccgtc caagctatct 240cgagcctgca gcgccacagt ccccggccct cgcccaggtt
cactgcaacc gttcagaggt 300ccccaggagc tgctgctggc gagcccgcta ctgcagggac
ctatggagcc attccgtagt 360gccatcccga gcaacgcact gctgcagctt ccctgagcct
ttccagcaag tttgttcaag 420attggctgtc aagaatcatg gactgttatt atatgccttg
ttttctgtca agacacc 477atg att cct ggt aac cga atg ctg atg gtc gtt
tta tta tgc caa gtc 525Met Ile Pro Gly Asn Arg Met Leu Met Val Val
Leu Leu Cys Gln Val1 5 10
15 ctg cta gga ggc gcg agc cat gct agt ttg ata cct gag acg ggg aag
573Leu Leu Gly Gly Ala Ser His Ala Ser Leu Ile Pro Glu Thr Gly Lys
20 25 30 aaa aaa gtc gcc
gag att cag ggc cac gcg gga gga cgc cgc tca ggg 621Lys Lys Val Ala
Glu Ile Gln Gly His Ala Gly Gly Arg Arg Ser Gly 35
40 45 cag agc cat gag ctc ctg cgg gac ttc
gag gcg aca ctt ctg cag atg 669Gln Ser His Glu Leu Leu Arg Asp Phe
Glu Ala Thr Leu Leu Gln Met 50 55 60
ttt ggg ctg cgc cgc cgc ccg cag cct agc aag agt gcc gtc
att ccg 717Phe Gly Leu Arg Arg Arg Pro Gln Pro Ser Lys Ser Ala Val
Ile Pro65 70 75 80gac
tac atg cgg gat ctt tac cgg ctt cag tct ggg gag gag gag gaa 765Asp
Tyr Met Arg Asp Leu Tyr Arg Leu Gln Ser Gly Glu Glu Glu Glu
85 90 95 gag cag atc cac agc act
ggt ctt gag tat cct gag cgc ccg gcc agc 813Glu Gln Ile His Ser Thr
Gly Leu Glu Tyr Pro Glu Arg Pro Ala Ser 100
105 110 cgg gcc aac acc gtg agg agc ttc cac cac
gaa gaa cat ctg gag aac 861Arg Ala Asn Thr Val Arg Ser Phe His His
Glu Glu His Leu Glu Asn 115 120
125 atc cca ggg acc agt gaa aac tct gct ttt cgt ttc ctc ttt
aac ctc 909Ile Pro Gly Thr Ser Glu Asn Ser Ala Phe Arg Phe Leu Phe
Asn Leu 130 135 140 agc
agc atc cct gag aac gag gcg atc tcc tct gca gag ctt cgg ctc 957Ser
Ser Ile Pro Glu Asn Glu Ala Ile Ser Ser Ala Glu Leu Arg Leu145
150 155 160ttc cgg gag cag gtg gac
cag ggc cct gat tgg gaa agg ggc ttc cac 1005Phe Arg Glu Gln Val Asp
Gln Gly Pro Asp Trp Glu Arg Gly Phe His 165
170 175 cgt ata aac att tat gag gtt atg aag ccc cca
gca gaa gtg gtg cct 1053Arg Ile Asn Ile Tyr Glu Val Met Lys Pro Pro
Ala Glu Val Val Pro 180 185
190 ggg cac ctc atc aca cga cta ctg gac acg aga ctg gtc cac cac
aat 1101Gly His Leu Ile Thr Arg Leu Leu Asp Thr Arg Leu Val His His
Asn 195 200 205 gtg aca
cgg tgg gaa act ttt gat gtg agc cct gcg gtc ctt cgc tgg 1149Val Thr
Arg Trp Glu Thr Phe Asp Val Ser Pro Ala Val Leu Arg Trp 210
215 220 acc cgg gag aag cag cca aac
tat ggg cta gcc att gag gtg act cac 1197Thr Arg Glu Lys Gln Pro Asn
Tyr Gly Leu Ala Ile Glu Val Thr His225 230
235 240ctc cat cag act cgg acc cac cag ggc cag cat gtc
agg att agc cga 1245Leu His Gln Thr Arg Thr His Gln Gly Gln His Val
Arg Ile Ser Arg 245 250
255 tcg tta cct caa ggg agt ggg aat tgg gcc cag ctc cgg ccc ctc ctg
1293Ser Leu Pro Gln Gly Ser Gly Asn Trp Ala Gln Leu Arg Pro Leu Leu
260 265 270 gtc acc ttt ggc
cat gat ggc cgg ggc cat gcc ttg acc cga cgc cgg 1341Val Thr Phe Gly
His Asp Gly Arg Gly His Ala Leu Thr Arg Arg Arg 275
280 285 agg gcc aag cgt agc cct aag cat cac
tca cag cgg gcc agg aag aag 1389Arg Ala Lys Arg Ser Pro Lys His His
Ser Gln Arg Ala Arg Lys Lys 290 295
300 aat aag aac tgc cgg cgc cac tcg ctc tat gtg gac ttc
agc gat gtg 1437Asn Lys Asn Cys Arg Arg His Ser Leu Tyr Val Asp Phe
Ser Asp Val305 310 315
320ggc tgg aat gac tgg att gtg gcc cca cca ggc tac cag gcc ttc tac
1485Gly Trp Asn Asp Trp Ile Val Ala Pro Pro Gly Tyr Gln Ala Phe Tyr
325 330 335 tgc cat ggg gac
tgc ccc ttt cca ctg gct gac cac ctc aac tca acc 1533Cys His Gly Asp
Cys Pro Phe Pro Leu Ala Asp His Leu Asn Ser Thr 340
345 350 aac cat gcc att gtg cag acc ctg gtc
aat tct gtc aat tcc agt atc 1581Asn His Ala Ile Val Gln Thr Leu Val
Asn Ser Val Asn Ser Ser Ile 355 360
365 ccc aaa gcc tgt tgt gtg ccc act gaa ctg agt gcc atc tcc
atg ctg 1629Pro Lys Ala Cys Cys Val Pro Thr Glu Leu Ser Ala Ile Ser
Met Leu 370 375 380 tac
ctg gat gag tat gat aag gtg gta ctg aaa aat tat cag gag atg 1677Tyr
Leu Asp Glu Tyr Asp Lys Val Val Leu Lys Asn Tyr Gln Glu Met385
390 395 400gta gta gag gga tgt ggg
tgc cgc tga gatcaggcag tccttgagga 1724Val Val Glu Gly Cys Gly
Cys Arg 405
tagacagata tacacaccac acacacacac cacatacacc acacacacac
gttcccatcc 1784actcacccac acactacaca gactgcttcc ttatagctgg acttttattt
aaaaaaaaaa 1844aaaaaaaaat ggaaaaaatc cctaaacatt caccttgacc ttatttatga
ctttacgtgc 1904aaatgttttg accatattga tcatatattt tgacaaaata tatttataac
tacgtattaa 1964aagaaaaaaa taaaatgagt cattatttta aaggt
1999520DNAArtificial SequenceDescription of Artificial
Sequence Synthetic primer 5actaccacca cggctttcac
20620DNAArtificial SequenceDescription of
Artificial Sequence Synthetic primer 6aataggattg tggggtgagc
20720DNAArtificial
SequenceDescription of Artificial Sequence Synthetic primer
7ccgtcaagat cttctcctcg
20820DNAArtificial SequenceDescription of Artificial Sequence Synthetic
primer 8tcatgtctga ggcgatgaag
20920DNAArtificial SequenceDescription of Artificial Sequence
Synthetic primer 9cccagcgtga aaagagagac
201020DNAArtificial SequenceDescription of Artificial
Sequence Synthetic primer 10gagaccgcag tccgtctaag
201120DNAArtificial SequenceDescription of
Artificial Sequence Synthetic primer 11tgagcctttc cagcaagttt
201220DNAArtificial
SequenceDescription of Artificial Sequence Synthetic primer
12cttccccgtc tcaggtatca
201325DNAArtificial SequenceDescription of Artificial Sequence Synthetic
oligonucleotide 13caagctggtc acattcatag cggct
251427DNAArtificial SequenceDescription of Artificial
Sequence Synthetic oligonucleotide 14ttcctcccct tggaggagcg ccgcccg
271519DNAArtificial
SequenceDescription of Artificial Sequence Synthetic primer
15ggagctcccc aatttgttg
191618DNAArtificial SequenceDescription of Artificial Sequence Synthetic
primer 16cagcctccgc ctcttacc
1817262DNAMus musculus 17cccaccaccg tctgcaagat ccccagcggg
tgcagcttga aaatcttcaa caaccaagag 60tttgctcagc tactggcgca gtctgtgaac
cacgggttcg agaccgtgta tgaactcacc 120aaaatgtgca ctattcggat gagcttcgtg
aagggttggg gagccgaata ccaccggcag 180gatgttacca gcaccccctg ctggattgag
atccatctgc atggccctct ccagtggctg 240gataaggttc tgacccagat gg
2621825DNAArtificial
SequenceDescription of Artificial Sequence Synthetic oligonucleotide
18catgctcgtc acattcaaag ccgct
25194978DNAHomo sapiensCDS(241)..(2553) 19ggtttccgga gctgcggcgg
cgcagactgg gagggggagc cgggggttcc gacgtcgcag 60ccgagggaac aagccccaac
cggatcctgg acaggcaccc cggcttggcg ctgtctctcc 120ccctcggctc ggagaggccc
ttcggcctga gggagcctcg ccgcccgtcc ccggcacacg 180cgcagccccg gcctctcggc
ctctgccgga gaaacagttg ggacccctga ttttagcagg 240atg gcc caa tgg aat cag
cta cag cag ctt gac aca cgg tac ctg gag 288Met Ala Gln Trp Asn Gln
Leu Gln Gln Leu Asp Thr Arg Tyr Leu Glu 1 5
10 15 cag ctc cat cag ctc tac agt gac agc ttc cca
atg gag ctg cgg cag 336Gln Leu His Gln Leu Tyr Ser Asp Ser Phe Pro
Met Glu Leu Arg Gln 20 25
30 ttt ctg gcc cct tgg att gag agt caa gat tgg gca tat gcg gcc agc
384Phe Leu Ala Pro Trp Ile Glu Ser Gln Asp Trp Ala Tyr Ala Ala Ser
35 40 45 aaa gaa tca
cat gcc act ttg gtg ttt cat aat ctc ctg gga gag att 432Lys Glu Ser
His Ala Thr Leu Val Phe His Asn Leu Leu Gly Glu Ile 50
55 60 gac cag cag tat agc cgc ttc ctg
caa gag tcg aat gtt ctc tat cag 480Asp Gln Gln Tyr Ser Arg Phe Leu
Gln Glu Ser Asn Val Leu Tyr Gln65 70 75
80cac aat cta cga aga atc aag cag ttt ctt cag agc agg
tat ctt gag 528His Asn Leu Arg Arg Ile Lys Gln Phe Leu Gln Ser Arg
Tyr Leu Glu 85 90 95
aag cca atg gag att gcc cgg att gtg gcc cgg tgc ctg tgg gaa gaa
576Lys Pro Met Glu Ile Ala Arg Ile Val Ala Arg Cys Leu Trp Glu Glu
100 105 110 tca cgc ctt cta
cag act gca gcc act gcg gcc cag caa ggg ggc cag 624Ser Arg Leu Leu
Gln Thr Ala Ala Thr Ala Ala Gln Gln Gly Gly Gln 115
120 125 gcc aac cac ccc aca gca gcc gtg gtg
acg gag aag cag cag atg ctg 672Ala Asn His Pro Thr Ala Ala Val Val
Thr Glu Lys Gln Gln Met Leu 130 135
140 gag cag cac ctt cag gat gtc cgg aag aga gtg cag gat
cta gaa cag 720Glu Gln His Leu Gln Asp Val Arg Lys Arg Val Gln Asp
Leu Glu Gln145 150 155
160aaa atg aaa gtg gta gag aat ctc cag gat gac ttt gat ttc aac tat
768Lys Met Lys Val Val Glu Asn Leu Gln Asp Asp Phe Asp Phe Asn Tyr
165 170 175 aaa acc ctc aag
agt caa gga gac atg caa gat ctg aat gga aac aac 816Lys Thr Leu Lys
Ser Gln Gly Asp Met Gln Asp Leu Asn Gly Asn Asn 180
185 190 cag tca gtg acc agg cag aag atg cag
cag ctg gaa cag atg ctc act 864Gln Ser Val Thr Arg Gln Lys Met Gln
Gln Leu Glu Gln Met Leu Thr 195 200
205 gcg ctg gac cag atg cgg aga agc atc gtg agt gag ctg gcg
ggg ctt 912Ala Leu Asp Gln Met Arg Arg Ser Ile Val Ser Glu Leu Ala
Gly Leu 210 215 220 ttg
tca gcg atg gag tac gtg cag aaa act ctc acg gac gag gag ctg 960Leu
Ser Ala Met Glu Tyr Val Gln Lys Thr Leu Thr Asp Glu Glu Leu225
230 235 240gct gac tgg aag agg cgg
caa cag att gcc tgc att gga ggc ccg ccc 1008Ala Asp Trp Lys Arg Arg
Gln Gln Ile Ala Cys Ile Gly Gly Pro Pro 245
250 255 aac atc tgc cta gat cgg cta gaa aac tgg ata
acg tca tta gca gaa 1056Asn Ile Cys Leu Asp Arg Leu Glu Asn Trp Ile
Thr Ser Leu Ala Glu 260 265
270 tct caa ctt cag acc cgt caa caa att aag aaa ctg gag gag ttg
cag 1104Ser Gln Leu Gln Thr Arg Gln Gln Ile Lys Lys Leu Glu Glu Leu
Gln 275 280 285 caa aaa
gtt tcc tac aaa ggg gac ccc att gta cag cac cgg ccg atg 1152Gln Lys
Val Ser Tyr Lys Gly Asp Pro Ile Val Gln His Arg Pro Met 290
295 300 ctg gag gag aga atc gtg gag
ctg ttt aga aac tta atg aaa agt gcc 1200Leu Glu Glu Arg Ile Val Glu
Leu Phe Arg Asn Leu Met Lys Ser Ala305 310
315 320ttt gtg gtg gag cgg cag ccc tgc atg ccc atg cat
cct gac cgg ccc 1248Phe Val Val Glu Arg Gln Pro Cys Met Pro Met His
Pro Asp Arg Pro 325 330
335 ctc gtc atc aag acc ggc gtc cag ttc act act aaa gtc agg ttg ctg
1296Leu Val Ile Lys Thr Gly Val Gln Phe Thr Thr Lys Val Arg Leu Leu
340 345 350 gtc aaa ttc cct
gag ttg aat tat cag ctt aaa att aaa gtg tgc att 1344Val Lys Phe Pro
Glu Leu Asn Tyr Gln Leu Lys Ile Lys Val Cys Ile 355
360 365 gac aaa gac tct ggg gac gtt gca gct
ctc aga gga tcc cgg aaa ttt 1392Asp Lys Asp Ser Gly Asp Val Ala Ala
Leu Arg Gly Ser Arg Lys Phe 370 375
380 aac att ctg ggc aca aac aca aaa gtg atg aac atg gaa
gaa tcc aac 1440Asn Ile Leu Gly Thr Asn Thr Lys Val Met Asn Met Glu
Glu Ser Asn385 390 395
400aac ggc agc ctc tct gca gaa ttc aaa cac ttg acc ctg agg gag cag
1488Asn Gly Ser Leu Ser Ala Glu Phe Lys His Leu Thr Leu Arg Glu Gln
405 410 415 aga tgt ggg aat
ggg ggc cga gcc aat tgt gat gct tcc ctg att gtg 1536Arg Cys Gly Asn
Gly Gly Arg Ala Asn Cys Asp Ala Ser Leu Ile Val 420
425 430 act gag gag ctg cac ctg atc acc ttt
gag acc gag gtg tat cac caa 1584Thr Glu Glu Leu His Leu Ile Thr Phe
Glu Thr Glu Val Tyr His Gln 435 440
445 ggc ctc aag att gac cta gag acc cac tcc ttg cca gtt gtg
gtg atc 1632Gly Leu Lys Ile Asp Leu Glu Thr His Ser Leu Pro Val Val
Val Ile 450 455 460 tcc
aac atc tgt cag atg cca aat gcc tgg gcg tcc atc ctg tgg tac 1680Ser
Asn Ile Cys Gln Met Pro Asn Ala Trp Ala Ser Ile Leu Trp Tyr465
470 475 480aac atg ctg acc aac aat
ccc aag aat gta aac ttt ttt acc aag ccc 1728Asn Met Leu Thr Asn Asn
Pro Lys Asn Val Asn Phe Phe Thr Lys Pro 485
490 495 cca att gga acc tgg gat caa gtg gcc gag gtc
ctg agc tgg cag ttc 1776Pro Ile Gly Thr Trp Asp Gln Val Ala Glu Val
Leu Ser Trp Gln Phe 500 505
510 tcc tcc acc acc aag cga gga ctg agc atc gag cag ctg act aca
ctg 1824Ser Ser Thr Thr Lys Arg Gly Leu Ser Ile Glu Gln Leu Thr Thr
Leu 515 520 525 gca gag
aaa ctc ttg gga cct ggt gtg aat tat tca ggg tgt cag atc 1872Ala Glu
Lys Leu Leu Gly Pro Gly Val Asn Tyr Ser Gly Cys Gln Ile 530
535 540 aca tgg gct aaa ttt tgc aaa
gaa aac atg gct ggc aag ggc ttc tcc 1920Thr Trp Ala Lys Phe Cys Lys
Glu Asn Met Ala Gly Lys Gly Phe Ser545 550
555 560ttc tgg gtc tgg ctg gac aat atc att gac ctt gtg
aaa aag tac atc 1968Phe Trp Val Trp Leu Asp Asn Ile Ile Asp Leu Val
Lys Lys Tyr Ile 565 570
575 ctg gcc ctt tgg aac gaa ggg tac atc atg ggc ttt atc agt aag gag
2016Leu Ala Leu Trp Asn Glu Gly Tyr Ile Met Gly Phe Ile Ser Lys Glu
580 585 590 cgg gag cgg gcc
atc ttg agc act aag cct cca ggc acc ttc ctg cta 2064Arg Glu Arg Ala
Ile Leu Ser Thr Lys Pro Pro Gly Thr Phe Leu Leu 595
600 605 aga ttc agt gaa agc agc aaa gaa gga
ggc gtc act ttc act tgg gtg 2112Arg Phe Ser Glu Ser Ser Lys Glu Gly
Gly Val Thr Phe Thr Trp Val 610 615
620 gag aag gac atc agc ggt aag acc cag atc cag tcc gtg
gaa cca tac 2160Glu Lys Asp Ile Ser Gly Lys Thr Gln Ile Gln Ser Val
Glu Pro Tyr625 630 635
640aca aag cag cag ctg aac aac atg tca ttt gct gaa atc atc atg ggc
2208Thr Lys Gln Gln Leu Asn Asn Met Ser Phe Ala Glu Ile Ile Met Gly
645 650 655 tat aag atc atg
gat gct acc aat atc ctg gtg tct cca ctg gtc tat 2256Tyr Lys Ile Met
Asp Ala Thr Asn Ile Leu Val Ser Pro Leu Val Tyr 660
665 670 ctc tat cct gac att ccc aag gag gag
gca ttc gga aag tat tgt cgg 2304Leu Tyr Pro Asp Ile Pro Lys Glu Glu
Ala Phe Gly Lys Tyr Cys Arg 675 680
685 cca gag agc cag gag cat cct gaa gct gac cca ggt agc gct
gcc cca 2352Pro Glu Ser Gln Glu His Pro Glu Ala Asp Pro Gly Ser Ala
Ala Pro 690 695 700 tac
ctg aag acc aag ttt atc tgt gtg aca cca acg acc tgc agc aat 2400Tyr
Leu Lys Thr Lys Phe Ile Cys Val Thr Pro Thr Thr Cys Ser Asn705
710 715 720acc att gac ctg ccg atg
tcc ccc cgc act tta gat tca ttg atg cag 2448Thr Ile Asp Leu Pro Met
Ser Pro Arg Thr Leu Asp Ser Leu Met Gln 725
730 735 ttt gga aat aat ggt gaa ggt gct gaa ccc tca
gca gga ggg cag ttt 2496Phe Gly Asn Asn Gly Glu Gly Ala Glu Pro Ser
Ala Gly Gly Gln Phe 740 745
750 gag tcc ctc acc ttt gac atg gag ttg acc tcg gag tgc gct acc
tcc 2544Glu Ser Leu Thr Phe Asp Met Glu Leu Thr Ser Glu Cys Ala Thr
Ser 755 760 765 ccc atg
tga ggagctgaga acggaagctg cagaaagata cgactgaggc 2593Pro Met
770
gcctacctgc attctgccac ccctcacaca gccaaacccc
agatcatctg aaactactaa 2653ctttgtggtt ccagattttt tttaatctcc tacttctgct
atctttgagc aatctgggca 2713cttttaaaaa tagagaaatg agtgaatgtg ggtgatctgc
ttttatctaa atgcaaataa 2773ggatgtgttc tctgagaccc atgatcaggg gatgtggcgg
ggggtggcta gagggagaaa 2833aaggaaatgt cttgtgttgt tttgttcccc tgccctcctt
tctcagcagc tttttgttat 2893tgttgttgtt gttcttagac aagtgcctcc tggtgcctgc
ggcatccttc tgcctgtttc 2953tgtaagcaaa tgccacaggc cacctatagc tacatactcc
tggcattgca ctttttaacc 3013ttgctgacat ccaaatagaa gataggacta tctaagccct
aggtttcttt ttaaattaag 3073aaataataac aattaaaggg caaaaaacac tgtatcagca
tagcctttct gtatttaaga 3133aacttaagca gccgggcatg gtggctcacg cctgtaatcc
cagcactttg ggaggccgag 3193gcggatcata aggtcaggag atcaagacca tcctggctaa
cacggtgaaa ccccgtctct 3253actaaaagta caaaaaatta gctgggtgtg gtggtgggcg
cctgtagtcc cagctactcg 3313ggaggctgag gcaggagaat cgcttgaacc tgagaggcgg
aggttgcagt gagccaaaat 3373tgcaccactg cacactgcac tccatcctgg gcgacagtct
gagactctgt ctcaaaaaaa 3433aaaaaaaaaa aaagaaactt cagttaacag cctccttggt
gctttaagca ttcagcttcc 3493ttcaggctgg taatttatat aatccctgaa acgggcttca
ggtcaaaccc ttaagacatc 3553tgaagctgca acctggcctt tggtgttgaa ataggaaggt
ttaaggagaa tctaagcatt 3613ttagactttt ttttataaat agacttattt tcctttgtaa
tgtattggcc ttttagtgag 3673taaggctggg cagagggtgc ttacaacctt gactcccttt
ctccctggac ttgatctgct 3733gtttcagagg ctaggttgtt tctgtgggtg ccttatcagg
gctgggatac ttctgattct 3793ggcttccttc ctgccccacc ctcccgaccc cagtccccct
gatcctgcta gaggcatgtc 3853tccttgcgtg tctaaaggtc cctcatcctg tttgttttag
gaatcctggt ctcaggacct 3913catggaagaa gagggggaga gagttacagg ttggacatga
tgcacactat ggggccccag 3973cgacgtgtct ggttgagctc agggaatatg gttcttagcc
agtttcttgg tgatatccag 4033tggcacttgt aatggcgtct tcattcagtt catgcagggc
aaaggcttac tgataaactt 4093gagtctgccc tcgtatgagg gtgtatacct ggcctccctc
tgaggctggt gactcctccc 4153tgctggggcc ccacaggtga ggcagaacag ctagagggcc
tccccgcctg cccgccttgg 4213ctggctagct cgcctctcct gtgcgtatgg gaacacctag
cacgtgctgg atgggctgcc 4273tctgactcag aggcatggcc ggatttggca actcaaaacc
accttgcctc agctgatcag 4333agtttctgtg gaattctgtt tgttaaatca aattagctgg
tctctgaatt aagggggaga 4393cgaccttctc taagatgaac agggttcgcc ccagtcctcc
tgcctggaga cagttgatgt 4453gtcatgcaga gctcttactt ctccagcaac actcttcagt
acataataag cttaactgat 4513aaacagaata tttagaaagg tgagacttgg gcttaccatt
gggtttaaat catagggacc 4573tagggcgagg gttcagggct tctctggagc agatattgtc
aagttcatgg ccttaggtag 4633catgtatctg gtcttaactc tgattgtagc aaaagttctg
agaggagctg agccctgttg 4693tggcccatta aagaacaggg tcctcaggcc ctgcccgctt
cctgtccact gccccctccc 4753catccccagc ccagccgagg gaatcccgtg ggttgcttac
ctacctataa ggtggtttat 4813aagctgctgt cctggccact gcattcaaat tccaatgtgt
acttcatagt gtaaaaattt 4873atattattgt gaggtttttt gtcttttttt tttttttttt
tttttggtat attgctgtat 4933ctactttaac ttccagaaat aaacgttata taggaaccgt
aaaaa 4978203631DNAHomo sapiensCDS(549)..(2147)
20gcggccgctg cagagattgg aatccgcctg ccgggcttgg cgaaggagaa gggaggaggc
60aggagcgagg agggaggagg gccaagggcg ggcaggaagg cttaggctcg gcgcgtccgt
120ccgcgcgcgg cgaagatcgc acggcccgat cgaggggcga ccgggtcggg gccgctgcac
180gccaagggcg aaggccgatt cgggccccac ttcgccccgg cggctcgccg cgcccacccg
240ctccgcgccg agggctggag gatgcgttcc ctggggtccg gacttatgaa aatatgcatc
300agtttaatac tgtcttggaa ttcatgagat ggaagcatag gtcaaagctg tttggagaaa
360atcagaagta cagttttatc tagccacatc ttggaggagt cgtaagaaag cagtgggagt
420tgaagtcatt gtcaagtgct tgcgatcttt tacaagaaaa tctcactgaa tgatagtcat
480ttaaattggt gaagtagcaa gaccaattat taaaggtgac agtacacagg aaacattaca
540attgaaca atg cct cag cta tac att tac atc aga tta ttg gga gcc tat
590 Met Pro Gln Leu Tyr Ile Tyr Ile Arg Leu Leu Gly Ala Tyr
1 5 10 ttg ttc atc att
tct cgt gtt caa gga cag aat ctg gat agt atg ctt 638Leu Phe Ile Ile
Ser Arg Val Gln Gly Gln Asn Leu Asp Ser Met Leu15 20
25 30cat ggc act ggg atg aaa tca gac tcc
gac cag aaa aag tca gaa aat 686His Gly Thr Gly Met Lys Ser Asp Ser
Asp Gln Lys Lys Ser Glu Asn 35 40
45 gga gta acc tta gca cca gag gat acc ttg cct ttt tta aag
tgc tat 734Gly Val Thr Leu Ala Pro Glu Asp Thr Leu Pro Phe Leu Lys
Cys Tyr 50 55 60 tgc
tca ggg cac tgt cca gat gat gct att aat aac aca tgc ata act 782Cys
Ser Gly His Cys Pro Asp Asp Ala Ile Asn Asn Thr Cys Ile Thr 65
70 75 aat gga cat tgc ttt gcc
atc ata gaa gaa gat gac cag gga gaa acc 830Asn Gly His Cys Phe Ala
Ile Ile Glu Glu Asp Asp Gln Gly Glu Thr 80 85
90 aca tta gct tca ggg tgt atg aaa tat gaa gga
tct gat ttt cag tgc 878Thr Leu Ala Ser Gly Cys Met Lys Tyr Glu Gly
Ser Asp Phe Gln Cys95 100 105
110aaa gat tct cca aaa gcc cag cta cgc cgg aca ata gaa tgt tgt cgg
926Lys Asp Ser Pro Lys Ala Gln Leu Arg Arg Thr Ile Glu Cys Cys Arg
115 120 125 acc aat tta tgt
aac cag tat ttg caa ccc aca ctg ccc cct gtt gtc 974Thr Asn Leu Cys
Asn Gln Tyr Leu Gln Pro Thr Leu Pro Pro Val Val 130
135 140 ata ggt ccg ttt ttt gat ggc agc att
cga tgg ctg gtt ttg ctc att 1022Ile Gly Pro Phe Phe Asp Gly Ser Ile
Arg Trp Leu Val Leu Leu Ile 145 150
155 tct atg gct gtc tgc ata att gct atg atc atc ttc tcc agc
tgc ttt 1070Ser Met Ala Val Cys Ile Ile Ala Met Ile Ile Phe Ser Ser
Cys Phe 160 165 170 tgt
tac aaa cat tat tgc aag agc atc tca agc aga cgt cgt tac aat 1118Cys
Tyr Lys His Tyr Cys Lys Ser Ile Ser Ser Arg Arg Arg Tyr Asn175
180 185 190cgt gat ttg gaa cag gat
gaa gca ttt att cca gtt gga gaa tca cta 1166Arg Asp Leu Glu Gln Asp
Glu Ala Phe Ile Pro Val Gly Glu Ser Leu 195
200 205 aaa gac ctt att gac cag tca caa agt tct ggt
agt ggg tct gga cta 1214Lys Asp Leu Ile Asp Gln Ser Gln Ser Ser Gly
Ser Gly Ser Gly Leu 210 215
220 cct tta ttg gtt cag cga act att gcc aaa cag att cag atg gtc
cgg 1262Pro Leu Leu Val Gln Arg Thr Ile Ala Lys Gln Ile Gln Met Val
Arg 225 230 235 caa gtt
ggt aaa ggc cga tat gga gaa gta tgg atg ggc aaa tgg cgt 1310Gln Val
Gly Lys Gly Arg Tyr Gly Glu Val Trp Met Gly Lys Trp Arg 240
245 250 ggc gaa aaa gtg gcg gtg aaa
gta ttc ttt acc act gaa gaa gcc agc 1358Gly Glu Lys Val Ala Val Lys
Val Phe Phe Thr Thr Glu Glu Ala Ser255 260
265 270tgg ttt cga gaa aca gaa atc tac caa act gtg cta
atg cgc cat gaa 1406Trp Phe Arg Glu Thr Glu Ile Tyr Gln Thr Val Leu
Met Arg His Glu 275 280
285 aac ata ctt ggt ttc ata gcg gca gac att aaa ggt aca ggt tcc tgg
1454Asn Ile Leu Gly Phe Ile Ala Ala Asp Ile Lys Gly Thr Gly Ser Trp
290 295 300 act cag ctc tat
ttg att act gat tac cat gaa aat gga tct ctc tat 1502Thr Gln Leu Tyr
Leu Ile Thr Asp Tyr His Glu Asn Gly Ser Leu Tyr 305
310 315 gac ttc ctg aaa tgt gct aca ctg gac
acc aga gcc ctg ctt aaa ttg 1550Asp Phe Leu Lys Cys Ala Thr Leu Asp
Thr Arg Ala Leu Leu Lys Leu 320 325
330 gct tat tca gct gcc tgt ggt ctg tgc cac ctg cac aca
gaa att tat 1598Ala Tyr Ser Ala Ala Cys Gly Leu Cys His Leu His Thr
Glu Ile Tyr335 340 345
350ggc acc caa gga aag ccc gca att gct cat cga gac cta aag agc aaa
1646Gly Thr Gln Gly Lys Pro Ala Ile Ala His Arg Asp Leu Lys Ser Lys
355 360 365 aac atc ctc atc
aag aaa aat ggg agt tgc tgc att gct gac ctg ggc 1694Asn Ile Leu Ile
Lys Lys Asn Gly Ser Cys Cys Ile Ala Asp Leu Gly 370
375 380 ctt gct gtt aaa ttc aac agt gac aca
aat gaa gtt gat gtg ccc ttg 1742Leu Ala Val Lys Phe Asn Ser Asp Thr
Asn Glu Val Asp Val Pro Leu 385 390
395 aat acc agg gtg ggc acc aaa cgc tac atg gct ccc gaa gtg
ctg gac 1790Asn Thr Arg Val Gly Thr Lys Arg Tyr Met Ala Pro Glu Val
Leu Asp 400 405 410 gaa
agc ctg aac aaa aac cac ttc cag ccc tac atc atg gct gac atc 1838Glu
Ser Leu Asn Lys Asn His Phe Gln Pro Tyr Ile Met Ala Asp Ile415
420 425 430tac agc ttc ggc cta atc
att tgg gag atg gct cgt cgt tgt atc aca 1886Tyr Ser Phe Gly Leu Ile
Ile Trp Glu Met Ala Arg Arg Cys Ile Thr 435
440 445 gga ggg atc gtg gaa gaa tac caa ttg cca tat
tac aac atg gta ccg 1934Gly Gly Ile Val Glu Glu Tyr Gln Leu Pro Tyr
Tyr Asn Met Val Pro 450 455
460 agt gat ccg tca tac gaa gat atg cgt gag gtt gtg tgt gtc aaa
cgt 1982Ser Asp Pro Ser Tyr Glu Asp Met Arg Glu Val Val Cys Val Lys
Arg 465 470 475 ttg cgg
cca att gtg tct aat cgg tgg aac agt gat gaa tgt cta cga 2030Leu Arg
Pro Ile Val Ser Asn Arg Trp Asn Ser Asp Glu Cys Leu Arg 480
485 490 gca gtt ttg aag cta atg tca
gaa tgc tgg gcc cac aat cca gcc tcc 2078Ala Val Leu Lys Leu Met Ser
Glu Cys Trp Ala His Asn Pro Ala Ser495 500
505 510aga ctc aca gca ttg aga att aag aag acg ctt gcc
aag atg gtt gaa 2126Arg Leu Thr Ala Leu Arg Ile Lys Lys Thr Leu Ala
Lys Met Val Glu 515 520
525 tcc caa gat gta aaa atc tga tggttaaacc atcggaggag aaactctaga
2177Ser Gln Asp Val Lys Ile
530 ctgcaagaac tgtttttacc
catggcatgg gtggaattag agtggaataa ggatgttaac 2237ttggttctca gactctttct
tcactacgtg ttcacaggct gctaatatta aacctttcag 2297tactcttatt aggatacaag
ctgggaactt ctaaacactt cattctttat atatggacag 2357ctttatttta aatgtggttt
ttgatgcctt tttttaagtg ggtttttatg aactgcatca 2417agacttcaat cctgattagt
gtctccagtc aagctctggg tactgaattg cctgttcata 2477aaacggtgct ttctgtgaaa
gccttaagaa gataaatgag cgcagcagag atggagaaat 2537agactttgcc ttttacctga
gacattcagt tcgtttgtat tctacctttg taaaacagcc 2597tatagatgat gatgtgtttg
ggatactgct tattttatga tagtttgtcc tgtgtcctta 2657gtgatgtgtg tgtgtctcca
tgcacatgca cgccgggatt cctctgctgc catttgaatt 2717agaagaaaat aatttatatg
catgcacagg aagatattgg tggccggtgg ttttgtgctt 2777taaaaatgca atatctgacc
aagattcgcc aatctcatac aagccattta ctttgcaagt 2837gagatagctt ccccaccagc
tttatttttt aacatgaaag ctgatgccaa ggccaaaaga 2897agtttaaagc atctgtaaat
ttggactgtt ttccttcaac caccattttt tttgtggtta 2957ttatttttgt cacggaaagc
atcctctcca aagttggagc ttctattgcc atgaaccatg 3017cttacaaaga aagcacttct
tattgaagtg aattcctgca tttgatagca atgtaagtgc 3077ctataaccat gttctatatt
ctttattctc agtaactttt aaaagggaag ttatttatat 3137tttgtgtata atgtgcttta
tttgcaaatc acccactcct ttacaaccat actttatata 3197tgtacataca ttcatactgt
agaaaccagc tcatgtgtac ctcatatccc atccttaaga 3257gaagaaatgt tataaagtag
aactaaatat aaattttcag aattaatgca ttcaaagtaa 3317tatatcaaat ccaggacttt
gttaacttca ggtaaaaact tcattagggt aatatcatct 3377caattttttc aaatgaaagg
attctctaat tagaaattta tatgtcagag ctgttataaa 3437tttatcaact gtcaaatatg
ttctggacag ctaaatcatt tgagattttt ggttttttga 3497tttctattcc ctaacttgtg
aagacaatga aaaatcaggc agaaatattt agtatctagt 3557cagtatctgt agctacactg
tataactgtt cttcaataaa atggttcata ttttatagaa 3617aaaaaaaaaa aaaa
36312119DNAArtificial
SequenceDescription of Artificial Sequence Synthetic primer
21agatgctcac tgcgctgga
192220DNAArtificial SequenceDescription of Artificial Sequence Synthetic
primer 22tccaatgcag gcaatctgtt
202319DNAArtificial SequenceDescription of Artificial Sequence
Synthetic primer 23tggcactggg atgaaatca
192421DNAArtificial SequenceDescription of Artificial
Sequence Synthetic primer 24tggttacata aattggtccg a
2125465PRTHomo sapiens 25Met Asn Val Thr Ser
Leu Phe Ser Phe Thr Ser Pro Ala Val Lys Arg 1 5
10 15 Leu Leu Gly Trp Lys Gln Gly Asp Glu
Glu Glu Lys Trp Ala Glu Lys 20 25
30 Ala Val Asp Ala Leu Val Lys Lys Leu Lys Lys Lys Lys
Gly Ala Met 35 40 45
Glu Glu Leu Glu Lys Ala Leu Ser Cys Pro Gly Gln Pro Ser Asn Cys
50 55 60 Val Thr Ile
Pro Arg Ser Leu Asp Gly Arg Leu Gln Val Ser His Arg 65
70 75 80 Lys Gly Leu Pro His Val Ile
Tyr Cys Arg Val Trp Arg Trp Pro Asp 85
90 95 Leu Gln Ser His His Glu Leu Lys Pro Leu Glu
Cys Cys Glu Phe Pro 100 105
110 Phe Gly Ser Lys Gln Lys Glu Val Cys Ile Asn Pro Tyr His Tyr
Lys 115 120 125 Arg
Val Glu Ser Pro Val Leu Pro Pro Val Leu Val Pro Arg His Ser 130
135 140 Glu Tyr Asn Pro Gln
His Ser Leu Leu Ala Gln Phe Arg Asn Leu Gly 145 150
155 160 Gln Asn Glu Pro His Met Pro Leu Asn
Ala Thr Phe Pro Asp Ser Phe 165 170
175 Gln Gln Pro Asn Ser His Pro Phe Pro His Ser Pro Asn
Ser Ser Tyr 180 185 190
Pro Asn Ser Pro Gly Ser Ser Ser Ser Thr Tyr Pro His Ser Pro Thr
195 200 205 Ser Ser Asp
Pro Gly Ser Pro Phe Gln Met Pro Ala Asp Thr Pro Pro 210
215 220 Pro Ala Tyr Leu Pro Pro Glu
Asp Pro Met Thr Gln Asp Gly Ser Gln 225 230
235 240 Pro Met Asp Thr Asn Met Met Ala Pro Pro Leu
Pro Ser Glu Ile Asn 245 250
255 Arg Gly Asp Val Gln Ala Val Ala Tyr Glu Glu Pro Lys His Trp
Cys 260 265 270 Ser
Ile Val Tyr Tyr Glu Leu Asn Asn Arg Val Gly Glu Ala Phe His 275
280 285 Ala Ser Ser Thr Ser
Val Leu Val Asp Gly Phe Thr Asp Pro Ser Asn 290 295
300 Asn Lys Asn Arg Phe Cys Leu Gly Leu
Leu Ser Asn Val Asn Arg Asn 305 310 315
320 Ser Thr Ile Glu Asn Thr Arg Arg His Ile Gly Lys Gly
Val His Leu 325 330 335
Tyr Tyr Val Gly Gly Glu Val Tyr Ala Glu Cys Leu Ser Asp Ser Ser
340 345 350 Ile Phe Val
Gln Ser Arg Asn Cys Asn Tyr His His Gly Phe His Pro 355
360 365 Thr Thr Val Cys Lys Ile Pro
Ser Gly Cys Ser Leu Lys Ile Phe Asn 370 375
380 Asn Gln Glu Phe Ala Gln Leu Leu Ala Gln Ser
Val Asn His Gly Phe 385 390 395
400 Glu Thr Val Tyr Glu Leu Thr Lys Met Cys Thr Ile Arg Met Ser
Phe 405 410 415 Val
Lys Gly Trp Gly Ala Glu Tyr His Arg Gln Asp Val Thr Ser Thr
420 425 430 Pro Cys Trp Ile Glu
Ile His Leu His Gly Pro Leu Gln Trp Leu Asp 435
440 445 Lys Val Leu Thr Gln Met Gly Ser Pro
His Asn Pro Ile Ser Ser Val 450 455
460 Ser
465
26503PRTHomo sapiens 26Met Thr Leu Gly Ser Pro Arg Lys Gly Leu Leu Met
Leu Leu Met Ala 1 5 10
15 Leu Val Thr Gln Gly Asp Pro Val Lys Pro Ser Arg Gly Pro Leu Val
20 25 30 Thr Cys
Thr Cys Glu Ser Pro His Cys Lys Gly Pro Thr Cys Arg Gly 35
40 45 Ala Trp Cys Thr Val Val
Leu Val Arg Glu Glu Gly Arg His Pro Gln 50 55
60 Glu His Arg Gly Cys Gly Asn Leu His Arg
Glu Leu Cys Arg Gly Arg 65 70 75
80 Pro Thr Glu Phe Val Asn His Tyr Cys Cys Asp Ser His Leu
Cys Asn 85 90 95
His Asn Val Ser Leu Val Leu Glu Ala Thr Gln Pro Pro Ser Glu Gln
100 105 110 Pro Gly Thr Asp
Gly Gln Leu Ala Leu Ile Leu Gly Pro Val Leu Ala 115
120 125 Leu Leu Ala Leu Val Ala Leu Gly
Val Leu Gly Leu Trp His Val Arg 130 135
140 Arg Arg Gln Glu Lys Gln Arg Gly Leu His Ser Glu
Leu Gly Glu Ser 145 150 155
160 Ser Leu Ile Leu Lys Ala Ser Glu Gln Gly Asp Thr Met Leu Gly Asp
165 170 175 Leu Leu
Asp Ser Asp Cys Thr Thr Gly Ser Gly Ser Gly Leu Pro Phe 180
185 190 Leu Val Gln Arg Thr Val
Ala Arg Gln Val Ala Leu Val Glu Cys Val 195 200
205 Gly Lys Gly Arg Tyr Gly Glu Val Trp Arg
Gly Leu Trp His Gly Glu 210 215 220
Ser Val Ala Val Lys Ile Phe Ser Ser Arg Asp Glu Gln Ser
Trp Phe 225 230 235 240
Arg Glu Thr Glu Ile Tyr Asn Thr Val Leu Leu Arg His Asp Asn Ile
245 250 255 Leu Gly Phe Ile
Ala Ser Asp Met Thr Ser Arg Asn Ser Ser Thr Gln 260
265 270 Leu Trp Leu Ile Thr His Tyr His
Glu His Gly Ser Leu Tyr Asp Phe 275 280
285 Leu Gln Arg Gln Thr Leu Glu Pro His Leu Ala Leu
Arg Leu Ala Val 290 295 300
Ser Ala Ala Cys Gly Leu Ala His Leu His Val Glu Ile Phe Gly Thr
305 310 315 320 Gln Gly
Lys Pro Ala Ile Ala His Arg Asp Phe Lys Ser Arg Asn Val
325 330 335 Leu Val Lys Ser Asn Leu
Gln Cys Cys Ile Ala Asp Leu Gly Leu Ala 340
345 350 Val Met His Ser Gln Gly Ser Asp Tyr Leu
Asp Ile Gly Asn Asn Pro 355 360
365 Arg Val Gly Thr Lys Arg Tyr Met Ala Pro Glu Val Leu Asp
Glu Gln 370 375 380
Ile Arg Thr Asp Cys Phe Glu Ser Tyr Lys Trp Thr Asp Ile Trp Ala 385
390 395 400 Phe Gly Leu Val
Leu Trp Glu Ile Ala Arg Arg Thr Ile Val Asn Gly 405
410 415 Ile Val Glu Asp Tyr Arg Pro Pro
Phe Tyr Asp Val Val Pro Asn Asp 420 425
430 Pro Ser Phe Glu Asp Met Lys Lys Val Val Cys Val
Asp Gln Gln Thr 435 440 445
Pro Thr Ile Pro Asn Arg Leu Ala Ala Asp Pro Val Leu Ser Gly Leu
450 455 460 Ala Gln
Met Met Arg Glu Cys Trp Tyr Pro Asn Pro Ser Ala Arg Leu 465
470 475 480 Thr Ala Leu Arg Ile Lys
Lys Thr Leu Gln Lys Ile Ser Asn Ser Pro 485
490 495 Glu Lys Pro Lys Val Ile Gln
500
27396PRTHomo sapiens 27Met Val Ala Gly Thr Arg Cys Leu Leu
Ala Leu Leu Leu Pro Gln Val 1 5 10
15 Leu Leu Gly Gly Ala Ala Gly Leu Val Pro Glu Leu Gly
Arg Arg Lys 20 25 30
Phe Ala Ala Ala Ser Ser Gly Arg Pro Ser Ser Gln Pro Ser Asp Glu
35 40 45 Val Leu Ser Glu
Phe Glu Leu Arg Leu Leu Ser Met Phe Gly Leu Lys 50
55 60 Gln Arg Pro Thr Pro Ser Arg Asp
Ala Val Val Pro Pro Tyr Met Leu 65 70
75 80 Asp Leu Tyr Arg Arg His Ser Gly Gln Pro Gly Ser
Pro Ala Pro Asp 85 90
95 His Arg Leu Glu Arg Ala Ala Ser Arg Ala Asn Thr Val Arg Ser Phe
100 105 110 His His
Glu Glu Ser Leu Glu Glu Leu Pro Glu Thr Ser Gly Lys Thr 115
120 125 Thr Arg Arg Phe Phe Phe
Asn Leu Ser Ser Ile Pro Thr Glu Glu Phe 130 135
140 Ile Thr Ser Ala Glu Leu Gln Val Phe Arg
Glu Gln Met Gln Asp Ala 145 150 155
160 Leu Gly Asn Asn Ser Ser Phe His His Arg Ile Asn Ile Tyr
Glu Ile 165 170 175
Ile Lys Pro Ala Thr Ala Asn Ser Lys Phe Pro Val Thr Arg Leu Leu
180 185 190 Asp Thr Arg Leu
Val Asn Gln Asn Ala Ser Arg Trp Glu Ser Phe Asp 195
200 205 Val Thr Pro Ala Val Met Arg Trp
Thr Ala Gln Gly His Ala Asn His 210 215
220 Gly Phe Val Val Glu Val Ala His Leu Glu Glu Lys
Gln Gly Val Ser 225 230 235
240 Lys Arg His Val Arg Ile Ser Arg Ser Leu His Gln Asp Glu His Ser
245 250 255 Trp Ser
Gln Ile Arg Pro Leu Leu Val Thr Phe Gly His Asp Gly Lys 260
265 270 Gly His Pro Leu His Lys
Arg Glu Lys Arg Gln Ala Lys His Lys Gln 275 280
285 Arg Lys Arg Leu Lys Ser Ser Cys Lys Arg
His Pro Leu Tyr Val Asp 290 295 300
Phe Ser Asp Val Gly Trp Asn Asp Trp Ile Val Ala Pro Pro
Gly Tyr 305 310 315 320
His Ala Phe Tyr Cys His Gly Glu Cys Pro Phe Pro Leu Ala Asp His
325 330 335 Leu Asn Ser Thr
Asn His Ala Ile Val Gln Thr Leu Val Asn Ser Val 340
345 350 Asn Ser Lys Ile Pro Lys Ala Cys
Cys Val Pro Thr Glu Leu Ser Ala 355 360
365 Ile Ser Met Leu Tyr Leu Asp Glu Asn Glu Lys Val
Val Leu Lys Asn 370 375 380
Tyr Gln Asp Met Val Val Glu Gly Cys Gly Cys Arg
385 390 395
28408PRTHomo sapiens 28Met Ile Pro Gly Asn Arg Met Leu Met Val Val Leu
Leu Cys Gln Val 1 5 10
15 Leu Leu Gly Gly Ala Ser His Ala Ser Leu Ile Pro Glu Thr Gly Lys
20 25 30 Lys Lys
Val Ala Glu Ile Gln Gly His Ala Gly Gly Arg Arg Ser Gly 35
40 45 Gln Ser His Glu Leu Leu
Arg Asp Phe Glu Ala Thr Leu Leu Gln Met 50 55
60 Phe Gly Leu Arg Arg Arg Pro Gln Pro Ser
Lys Ser Ala Val Ile Pro 65 70 75
80 Asp Tyr Met Arg Asp Leu Tyr Arg Leu Gln Ser Gly Glu Glu
Glu Glu 85 90 95
Glu Gln Ile His Ser Thr Gly Leu Glu Tyr Pro Glu Arg Pro Ala Ser
100 105 110 Arg Ala Asn Thr
Val Arg Ser Phe His His Glu Glu His Leu Glu Asn 115
120 125 Ile Pro Gly Thr Ser Glu Asn Ser
Ala Phe Arg Phe Leu Phe Asn Leu 130 135
140 Ser Ser Ile Pro Glu Asn Glu Ala Ile Ser Ser Ala
Glu Leu Arg Leu 145 150 155
160 Phe Arg Glu Gln Val Asp Gln Gly Pro Asp Trp Glu Arg Gly Phe His
165 170 175 Arg Ile
Asn Ile Tyr Glu Val Met Lys Pro Pro Ala Glu Val Val Pro 180
185 190 Gly His Leu Ile Thr Arg
Leu Leu Asp Thr Arg Leu Val His His Asn 195 200
205 Val Thr Arg Trp Glu Thr Phe Asp Val Ser
Pro Ala Val Leu Arg Trp 210 215 220
Thr Arg Glu Lys Gln Pro Asn Tyr Gly Leu Ala Ile Glu Val
Thr His 225 230 235 240
Leu His Gln Thr Arg Thr His Gln Gly Gln His Val Arg Ile Ser Arg
245 250 255 Ser Leu Pro Gln
Gly Ser Gly Asn Trp Ala Gln Leu Arg Pro Leu Leu 260
265 270 Val Thr Phe Gly His Asp Gly Arg
Gly His Ala Leu Thr Arg Arg Arg 275 280
285 Arg Ala Lys Arg Ser Pro Lys His His Ser Gln Arg
Ala Arg Lys Lys 290 295 300
Asn Lys Asn Cys Arg Arg His Ser Leu Tyr Val Asp Phe Ser Asp Val
305 310 315 320 Gly Trp
Asn Asp Trp Ile Val Ala Pro Pro Gly Tyr Gln Ala Phe Tyr
325 330 335 Cys His Gly Asp Cys Pro
Phe Pro Leu Ala Asp His Leu Asn Ser Thr 340
345 350 Asn His Ala Ile Val Gln Thr Leu Val Asn
Ser Val Asn Ser Ser Ile 355 360
365 Pro Lys Ala Cys Cys Val Pro Thr Glu Leu Ser Ala Ile Ser
Met Leu 370 375 380
Tyr Leu Asp Glu Tyr Asp Lys Val Val Leu Lys Asn Tyr Gln Glu Met 385
390 395 400 Val Val Glu Gly
Cys Gly Cys Arg 405
29770PRTHomo sapiens 29Met Ala
Gln Trp Asn Gln Leu Gln Gln Leu Asp Thr Arg Tyr Leu Glu 1
5 10 15 Gln Leu His Gln Leu Tyr
Ser Asp Ser Phe Pro Met Glu Leu Arg Gln 20
25 30 Phe Leu Ala Pro Trp Ile Glu Ser Gln Asp
Trp Ala Tyr Ala Ala Ser 35 40
45 Lys Glu Ser His Ala Thr Leu Val Phe His Asn Leu Leu Gly
Glu Ile 50 55 60
Asp Gln Gln Tyr Ser Arg Phe Leu Gln Glu Ser Asn Val Leu Tyr Gln 65
70 75 80 His Asn Leu Arg
Arg Ile Lys Gln Phe Leu Gln Ser Arg Tyr Leu Glu 85
90 95 Lys Pro Met Glu Ile Ala Arg Ile
Val Ala Arg Cys Leu Trp Glu Glu 100 105
110 Ser Arg Leu Leu Gln Thr Ala Ala Thr Ala Ala Gln
Gln Gly Gly Gln 115 120 125
Ala Asn His Pro Thr Ala Ala Val Val Thr Glu Lys Gln Gln Met Leu
130 135 140 Glu Gln
His Leu Gln Asp Val Arg Lys Arg Val Gln Asp Leu Glu Gln 145
150 155 160 Lys Met Lys Val Val Glu
Asn Leu Gln Asp Asp Phe Asp Phe Asn Tyr 165
170 175 Lys Thr Leu Lys Ser Gln Gly Asp Met Gln
Asp Leu Asn Gly Asn Asn 180 185
190 Gln Ser Val Thr Arg Gln Lys Met Gln Gln Leu Glu Gln Met
Leu Thr 195 200 205
Ala Leu Asp Gln Met Arg Arg Ser Ile Val Ser Glu Leu Ala Gly Leu 210
215 220 Leu Ser Ala Met
Glu Tyr Val Gln Lys Thr Leu Thr Asp Glu Glu Leu 225 230
235 240 Ala Asp Trp Lys Arg Arg Gln Gln
Ile Ala Cys Ile Gly Gly Pro Pro 245 250
255 Asn Ile Cys Leu Asp Arg Leu Glu Asn Trp Ile Thr
Ser Leu Ala Glu 260 265 270
Ser Gln Leu Gln Thr Arg Gln Gln Ile Lys Lys Leu Glu Glu Leu Gln
275 280 285 Gln Lys
Val Ser Tyr Lys Gly Asp Pro Ile Val Gln His Arg Pro Met 290
295 300 Leu Glu Glu Arg Ile Val
Glu Leu Phe Arg Asn Leu Met Lys Ser Ala 305 310
315 320 Phe Val Val Glu Arg Gln Pro Cys Met Pro
Met His Pro Asp Arg Pro 325 330
335 Leu Val Ile Lys Thr Gly Val Gln Phe Thr Thr Lys Val Arg
Leu Leu 340 345 350
Val Lys Phe Pro Glu Leu Asn Tyr Gln Leu Lys Ile Lys Val Cys Ile
355 360 365 Asp Lys Asp Ser
Gly Asp Val Ala Ala Leu Arg Gly Ser Arg Lys Phe 370
375 380 Asn Ile Leu Gly Thr Asn Thr Lys
Val Met Asn Met Glu Glu Ser Asn 385 390
395 400 Asn Gly Ser Leu Ser Ala Glu Phe Lys His Leu Thr
Leu Arg Glu Gln 405 410
415 Arg Cys Gly Asn Gly Gly Arg Ala Asn Cys Asp Ala Ser Leu Ile Val
420 425 430 Thr Glu
Glu Leu His Leu Ile Thr Phe Glu Thr Glu Val Tyr His Gln 435
440 445 Gly Leu Lys Ile Asp Leu
Glu Thr His Ser Leu Pro Val Val Val Ile 450 455
460 Ser Asn Ile Cys Gln Met Pro Asn Ala Trp
Ala Ser Ile Leu Trp Tyr 465 470 475
480 Asn Met Leu Thr Asn Asn Pro Lys Asn Val Asn Phe Phe Thr
Lys Pro 485 490 495
Pro Ile Gly Thr Trp Asp Gln Val Ala Glu Val Leu Ser Trp Gln Phe
500 505 510 Ser Ser Thr Thr
Lys Arg Gly Leu Ser Ile Glu Gln Leu Thr Thr Leu 515
520 525 Ala Glu Lys Leu Leu Gly Pro Gly
Val Asn Tyr Ser Gly Cys Gln Ile 530 535
540 Thr Trp Ala Lys Phe Cys Lys Glu Asn Met Ala Gly
Lys Gly Phe Ser 545 550 555
560 Phe Trp Val Trp Leu Asp Asn Ile Ile Asp Leu Val Lys Lys Tyr Ile
565 570 575 Leu Ala
Leu Trp Asn Glu Gly Tyr Ile Met Gly Phe Ile Ser Lys Glu 580
585 590 Arg Glu Arg Ala Ile Leu
Ser Thr Lys Pro Pro Gly Thr Phe Leu Leu 595 600
605 Arg Phe Ser Glu Ser Ser Lys Glu Gly Gly
Val Thr Phe Thr Trp Val 610 615 620
Glu Lys Asp Ile Ser Gly Lys Thr Gln Ile Gln Ser Val Glu
Pro Tyr 625 630 635 640
Thr Lys Gln Gln Leu Asn Asn Met Ser Phe Ala Glu Ile Ile Met Gly
645 650 655 Tyr Lys Ile Met
Asp Ala Thr Asn Ile Leu Val Ser Pro Leu Val Tyr 660
665 670 Leu Tyr Pro Asp Ile Pro Lys Glu
Glu Ala Phe Gly Lys Tyr Cys Arg 675 680
685 Pro Glu Ser Gln Glu His Pro Glu Ala Asp Pro Gly
Ser Ala Ala Pro 690 695 700
Tyr Leu Lys Thr Lys Phe Ile Cys Val Thr Pro Thr Thr Cys Ser Asn
705 710 715 720 Thr Ile
Asp Leu Pro Met Ser Pro Arg Thr Leu Asp Ser Leu Met Gln
725 730 735 Phe Gly Asn Asn Gly Glu
Gly Ala Glu Pro Ser Ala Gly Gly Gln Phe 740
745 750 Glu Ser Leu Thr Phe Asp Met Glu Leu Thr
Ser Glu Cys Ala Thr Ser 755 760
765 Pro Met
770
30532PRTHomo sapiens 30Met Pro Gln Leu Tyr Ile Tyr Ile Arg Leu Leu Gly
Ala Tyr Leu Phe 1 5 10
15 Ile Ile Ser Arg Val Gln Gly Gln Asn Leu Asp Ser Met Leu His Gly
20 25 30 Thr Gly
Met Lys Ser Asp Ser Asp Gln Lys Lys Ser Glu Asn Gly Val 35
40 45 Thr Leu Ala Pro Glu Asp
Thr Leu Pro Phe Leu Lys Cys Tyr Cys Ser 50 55
60 Gly His Cys Pro Asp Asp Ala Ile Asn Asn
Thr Cys Ile Thr Asn Gly 65 70 75
80 His Cys Phe Ala Ile Ile Glu Glu Asp Asp Gln Gly Glu Thr
Thr Leu 85 90 95
Ala Ser Gly Cys Met Lys Tyr Glu Gly Ser Asp Phe Gln Cys Lys Asp
100 105 110 Ser Pro Lys Ala
Gln Leu Arg Arg Thr Ile Glu Cys Cys Arg Thr Asn 115
120 125 Leu Cys Asn Gln Tyr Leu Gln Pro
Thr Leu Pro Pro Val Val Ile Gly 130 135
140 Pro Phe Phe Asp Gly Ser Ile Arg Trp Leu Val Leu
Leu Ile Ser Met 145 150 155
160 Ala Val Cys Ile Ile Ala Met Ile Ile Phe Ser Ser Cys Phe Cys Tyr
165 170 175 Lys His
Tyr Cys Lys Ser Ile Ser Ser Arg Arg Arg Tyr Asn Arg Asp 180
185 190 Leu Glu Gln Asp Glu Ala
Phe Ile Pro Val Gly Glu Ser Leu Lys Asp 195 200
205 Leu Ile Asp Gln Ser Gln Ser Ser Gly Ser
Gly Ser Gly Leu Pro Leu 210 215 220
Leu Val Gln Arg Thr Ile Ala Lys Gln Ile Gln Met Val Arg
Gln Val 225 230 235 240
Gly Lys Gly Arg Tyr Gly Glu Val Trp Met Gly Lys Trp Arg Gly Glu
245 250 255 Lys Val Ala Val
Lys Val Phe Phe Thr Thr Glu Glu Ala Ser Trp Phe 260
265 270 Arg Glu Thr Glu Ile Tyr Gln Thr
Val Leu Met Arg His Glu Asn Ile 275 280
285 Leu Gly Phe Ile Ala Ala Asp Ile Lys Gly Thr Gly
Ser Trp Thr Gln 290 295 300
Leu Tyr Leu Ile Thr Asp Tyr His Glu Asn Gly Ser Leu Tyr Asp Phe
305 310 315 320 Leu Lys
Cys Ala Thr Leu Asp Thr Arg Ala Leu Leu Lys Leu Ala Tyr
325 330 335 Ser Ala Ala Cys Gly Leu
Cys His Leu His Thr Glu Ile Tyr Gly Thr 340
345 350 Gln Gly Lys Pro Ala Ile Ala His Arg Asp
Leu Lys Ser Lys Asn Ile 355 360
365 Leu Ile Lys Lys Asn Gly Ser Cys Cys Ile Ala Asp Leu Gly
Leu Ala 370 375 380
Val Lys Phe Asn Ser Asp Thr Asn Glu Val Asp Val Pro Leu Asn Thr 385
390 395 400 Arg Val Gly Thr
Lys Arg Tyr Met Ala Pro Glu Val Leu Asp Glu Ser 405
410 415 Leu Asn Lys Asn His Phe Gln Pro
Tyr Ile Met Ala Asp Ile Tyr Ser 420 425
430 Phe Gly Leu Ile Ile Trp Glu Met Ala Arg Arg Cys
Ile Thr Gly Gly 435 440 445
Ile Val Glu Glu Tyr Gln Leu Pro Tyr Tyr Asn Met Val Pro Ser Asp
450 455 460 Pro Ser
Tyr Glu Asp Met Arg Glu Val Val Cys Val Lys Arg Leu Arg 465
470 475 480 Pro Ile Val Ser Asn Arg
Trp Asn Ser Asp Glu Cys Leu Arg Ala Val 485
490 495 Leu Lys Leu Met Ser Glu Cys Trp Ala His
Asn Pro Ala Ser Arg Leu 500 505
510 Thr Ala Leu Arg Ile Lys Lys Thr Leu Ala Lys Met Val Glu
Ser Gln 515 520 525
Asp Val Lys Ile 530
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