Patent application title: ENDOLYSIN OBPGPLYS
Inventors:
IPC8 Class: AC12N936FI
USPC Class:
424 9461
Class name: Enzyme or coenzyme containing hydrolases (3. ) (e.g., urease, lipase, asparaginase, muramidase, etc.) acting on glycosyl compound (3.2) (e.g., glycosidases lysozyme, nucleosidases, cellulase, etc.)
Publication date: 2016-01-14
Patent application number: 20160010071
Abstract:
The present invention relates to a polypeptide with an amino acid
sequence according to SEQ ID NO: 1 and fragments or derivatives thereof.
The present invention further relates to fusion proteins comprising said
polypeptide and an additional peptide stretch fused to said polypeptide
at the N- or C-terminus. Moreover, the present invention relates to
nucleic acid molecules encoding said polypeptide or fusion protein,
vectors comprising said nucleic acid molecules and host cells comprising
either said nucleic acid molecules or said vectors. In addition, the
present invention relates to said polypeptide or fusion protein for use
as a medicament, in particular for the treatment or prevention of
Gram-negative bacterial infections, as diagnostic means, as cosmetic
substance or as sanitizing agent. The present invention also relates to
the use of said polypeptide or fusion protein for the treatment or
prevention of Gram-negative bacterial contamination of foodstuff, of food
processing equipment, of food processing plants, of surfaces coming into
contact with foodstuff, of medical devices, of surfaces in hospitals and
surgeries. Furthermore, the present invention relates to a pharmaceutical
composition comprising said polypeptide or fusion protein.Claims:
1-19. (canceled)
20. A method of disinfecting an environment comprising contacting that environment with a fusion polypeptide comprising (i) the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous polypeptide.
21. A method of disinfecting an environment comprising contacting that environment with a fusion protein comprising (i) a polypeptide comprising the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous peptide fused to said polypeptide at the N- or C-terminus, wherein said peptide stretch is a cationic peptide, polycationic peptide, amphipathic peptide, sushi peptide, defensin, hydrophobic peptide and/or an antimicrobial peptide.
22. A method treating or preventing a Gram-negative bacterial infection comprising administering to a human or animal subject a fusion polypeptide comprising (i) the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous polypeptide.
23. A method treating or preventing a Gram-negative bacterial infection comprising administering to a human or animal subject a fusion protein comprising (i) a polypeptide comprising the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous peptide fused to said polypeptide at the N- or C-terminus, wherein said peptide stretch is a cationic peptide, polycationic peptide, amphipathic peptide, sushi peptide, defensin, hydrophobic peptide and/or an antimicrobial peptide.
24. A method of treating or preventing a Gram-negative bacterial contamination of a foodstuff, a food processing equipment, a food processing plant, a surface coming into contact with foodstuff, a medical device, a surface in a medical facility or a surgical environment comprising contacting said foodstuff, equipment, plant, surface, medical device, facility or environment with a fusion polypeptide comprising (i) the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous polypeptide.
25. A method of treating or preventing a Gram-negative bacterial contamination of a foodstuff, a food processing equipment, a food processing plant, a surface coming into contact with foodstuff, a medical device, a surface in a medical facility or a surgical environment comprising contacting said foodstuff, equipment, plant, surface, medical device, facility or environment with a fusion protein comprising (i) a polypeptide comprising the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous peptide fused to said polypeptide at the N- or C-terminus, wherein said peptide stretch is a cationic peptide, polycationic peptide, amphipathic peptide, sushi peptide, defensin, hydrophobic peptide and/or an antimicrobial peptide.
26. A method diagnosing a Gram-negative bacterial infection comprising contacting a sample with a fusion polypeptide comprising (i) the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous polypeptide.
27. A method of diagnosing a Gram-negative bacterial infection comprising contacting a sample with a fusion protein comprising (i) a polypeptide comprising the amino acid sequence of SEQ ID NO: 1, or a fragment thereof, wherein the fragment comprises an amino acid sequence selected from the group consisting of SEQ ID NO: 4 and 5, or comprises the amino acid sequences of SEQ ID NO: 4 and 5, and (ii) a heterologous peptide fused to said polypeptide at the N- or C-terminus, wherein said peptide stretch is a cationic peptide, polycationic peptide, amphipathic peptide, sushi peptide, defensin, hydrophobic peptide and/or an antimicrobial peptide.
Description:
[0001] This application is a divisional of U.S. application Ser. No.
14/475,900, filed Sep. 3, 2014, which is a divisional of U.S. application
Ser. No. 13/390,033, now U.S. Pat. No. 8,846,865, which was filed as a
national phase application under 35 U.S.C. §371 of International
Application No. PCT/EP2010/062351 filed 24 Aug. 2010, which claims
priority to European Application No. 09 168 527.1 filed on 24 Aug. 2009.
The entire text of each of the above-referenced disclosures is
specifically incorporated herein by reference without disclaimer.
[0002] The sequence listing that is contained in the file named "DEBEP0112USD2_ST25.txt", which is 139 KB (as measured in Microsoft Windows®) and was created on Sep. 24, 2015, is filed herewith by electronic submission and is incorporated by reference herein.
BACKGROUND OF THE INVENTION
[0003] 1. Field of the Invention
[0004] The present invention relates to a polypeptide with an amino acid sequence according to SEQ ID NO: 1 and fragments or derivatives thereof. The present invention further relates to fusion proteins comprising said polypeptide and an additional peptide stretch fused to said polypeptide at the N- or C-terminus. Moreover, the present invention relates to nucleic acid molecules encoding said polypeptide or fusion protein, vectors comprising said nucleic acid molecules and host cells comprising either said nucleic acid molecules or said vectors. In addition, the present invention relates to said polypeptide or fusion protein for use as a medicament, in particular for the treatment or prevention of Gram-negative bacterial infections, as diagnostic means, as cosmetic substance or as sanitizing agent. The present invention also relates to the use of said polypeptide or fusion protein for the treatment or prevention of Gram-negative bacterial contamination of foodstuff, of food processing equipment, of food processing plants, of surfaces coming into contact with foodstuff, of medical devices, of surfaces in hospitals and surgeries. Furthermore, the present invention relates to a pharmaceutical composition comprising said polypeptide or fusion protein.
[0005] 2. Description of Related Art
[0006] Gram-negative bacteria possess an outer membrane, with its characteristic asymmetric bilayer as a hallmark. The outer membrane bilayer consists of an inner monolayer containing phospholipids (primarily phosphatidyl ethanolamine) and an outer monolayer that is mainly composed of a single glycolipid, lipopolysaccharide (LPS). There is an immense diversity of LPS structures in the bacterial kingdom and the LPS structure may be modified in response to prevailing environmental conditions. The stability of the LPS layer and interaction between different LPS molecules is mainly achieved by the electrostatic interaction of divalent ions (Mg2+, Ca2+) with the anionic components of the LPS molecule (phosphate groups in the lipid A and the inner core and carboxyl groups of KDO). Furthermore, the dense and ordered packing of the hydrophobic moiety of lipid A, favored by the absence of unsaturated fatty acids, forms a rigid structure with high viscosity. This makes it less permeable for lipophilic molecules and confers additional stability to the outer membrane (OM).
[0007] Various types of agents having bactericidal or bacteriostatic activity are known, e.g. antibiotics, endolysins, antimicrobial peptides and defensins. Increasingly microbial resistance to antibiotics, however, is creating difficulties in treating more and more infections caused by bacteria. Particular difficulties arise with infections caused by Gram-negative bacteria like Pseudomonas aeruginosa and Enterobacteriaceae.
[0008] Endolysins are peptidoglycan hydrolases encoded by bacteriophages (or bacterial viruses). They are synthesized during late gene expression in the lytic cycle of phage multiplication and mediate the release of progeny virions from infected cells through degradation of the bacterial peptidoglycan. They are either β(1,4)-glycosylases (lysozymes), transglycosylases, amidases or endopeptidases. Antimicrobial application of endolysins was already suggested in 1991 by Gasson (GB2243611). Although the killing capacity of endolysins has been known for a long time, the use of these enzymes as antibacterials was ignored due to the success and dominance of antibiotics. Only after the appearance of multiple antibiotic resistant bacteria this simple concept of combating human pathogens with endolysins received interest. A compelling need to develop totally new classes of antibacterial agents emerged and endolysins used as `enzybiotics`--a hybrid term of `enzymes` and `antibiotics`--perfectly met this need. In 2001, Fischetti and coworkers demonstrated for the first time the therapeutic potential of bacteriophage Cl endolysin towards group A streptococci (Nelson et al., 2001). Since then many publications have established endolysins as an attractive and complementary alternative to control bacterial infections, particularly by Gram positive bacteria. Subsequently different endolysins against other Gram positive pathogens such as Streptococcus pneumoniae (Loeffler et al., 2001), Bacillus anthracis (Schuch et al., 2002), S. agalactiae (Cheng et al., 2005) and Staphylococcus aureus (Rashel et al, 2007) have proven their efficacy as enzybiotics. Nowadays, the most important challenge of endolysin therapy lies in the insensitivity of Gram-negative bacteria towards the exogenous action of endolysins, since the outer membrane shields the access of endolysins from the peptidoglycan. This currently prevents the expansion of the range of effective endolysins to important Gram-negative pathogens.
[0009] Antimicrobial peptides (AMPs) represent a wide range of short, cationic or amphipatic, gene encoded peptide antibiotics that can be found in virtually every organism. Different AMPs display different properties, and many peptides in this class are being intensively researched not only as antibiotics, but also as templates for cell penetrating peptides. Despite sharing a few common features (e.g., cationicity, amphipathicity and short size), AMP sequences vary greatly, and at least four structural groups (α-helical, β-sheet, extended and looped) have been proposed to accommodate the diversity of the observed AMP conformations. Likewise, several modes of action as antibiotics have been proposed, and it was shown e.g. that the primary target of many of these peptides is the cell membrane whereas for other peptides the primary target is cytoplasmic invasion and disruption of core metabolic functions. AMPs may become concentrated enough to exhibit cooperative activity despite the absence of specific target binding; for example, by forming a pore in the membrane, as is the case for most AMPs. However, this phenomenon has only been observed in model phospholipid bilayers, and in some cases, AMP concentrations in the membrane that were as high as one peptide molecule per six phospholipid molecules were required for these events to occur. These concentrations are close to, if not at, full membrane saturation. As the minimum inhibitory concentration (MIC) for AMPs are typically in the low micromolar range, scepticism has understandably arisen regarding the relevance of these thresholds and their importance in vivo (Melo et al., Nature reviews, Microbiology, 2009, 245).
[0010] Defensins are a large family of small, cationic, cysteine- and arginine-rich antimicrobial peptides, found in both vertebrates and invertebrates. Defensins are divided into five groups according to the spacing pattern of cysteines: plant, invertebrate, α-, β-, and θ-defensins. The latter three are mostly found in mammals. α-defensins are proteins found in neutrophils and intestinal epithelia. β-defensins are the most widely distributed and are secreted by leukocytes and epithelial cells of many kinds. θ-defensins have been rarely found so far e.g. in leukocytes of rhesus macaques. Defensins are active against bacteria, fungi and many enveloped and nonenveloped viruses. However, the concentrations needed for efficient killing of bacteria are mostly high, i.e. in the micromolar range. Activity of many peptides may be limited in presence of physiological salt conditions, divalent cations and serum. Depending on the content of hydrophobic amino acid residues defensins also show haemolytic activity.
BRIEF SUMMARY OF THE INVENTION
[0011] Thus, there is a need for new antimicrobial agents against Gram-negative bacteria. This object is solved by the subject matter defined in the claims.
BRIEF DESCRIPTION OF THE DRAWINGS
[0012] The following figures serve to illustrate the invention.
[0013] FIG. 1 shows the endolysin OBPgpLYS according to the present invention. In (A) the amino acid sequence of the endolysin OBPgpLYS (SEQ ID NO: 1) according to the present invention is depicted. In (B) the primary structure of the OBPgpLYS comprising an additional His6-tag is given showing the results of a functional analysis using BLASTp and Pfam analysis. The predicted N-terminal peptidoglycan binding domain (PBD, amino acid residues 7-96) is underlined and the C-terminal catalytic domain (amino acid residues 126-292) of the lysozyme-like superfamily is written in italics. The complete amino acid sequence of the OBPgpLYS comprising an additional His6-tag at the C-terminus shown in (B) is depicted in SEQ ID NO: 47.
[0014] FIG. 2 shows the nucleotide sequence (SEQ ID NO: 101) of the endolysin of phage OBP.
[0015] FIG. 3 shows the nucleotide sequence (SEQ ID NO: 3) of the endolysin OBPgpLYS (SEQ ID NO: 1) according to the present invention.
[0016] FIGS. 4A-4B show pictures of a Coomassie-stained SDS-PAGE showing the results of the expression and purification of the unmodified endolysin OBPgpLYS (4A, SEQ ID NO: 47) and its modified endolysin variant PKOBPgpLYS (4B, SEQ ID NO: 49). The lane LMW pertains to a size marker (LMW ladder). The following three lanes pertain to protein fractions of the purified protein in Elution Buffer (20 mM NaH2PO4--NaOH pH 7.4; 0.5 M NaCl; 500 mM imidazole) after Ni2+ affinity chromatography. The lane FT pertains to the flow through and the lane W to waste fractions. Only minor secondary bands are visible in the purified protein fractions, indicating the high purity of the recombinant protein (>90%).
[0017] FIGS. 5A-5F show in a graphic representation the antibacterial activities of different compositions of unmodified OBPgpLYS (SEQ ID NO: 47) and the modified PKOBPgpLYS (SEQ ID NO: 49) on several exponential growing Gram-negative bacteria after an incubation at room temperature and without shaking. Each species of Gram-negative bacteria was incubated for 30 minutes with a composition comprising 0.5 mM EDTA but no endolysin, with a composition comprising 1.315 μM unmodified OBPgpLYS but no EDTA, with a composition comprising 1.315 μM modified PKOBPgpLYS but no EDTA, with a composition comprising 1.315 μM unmodified OBPgpLYS and 0.5 mM EDTA and with a composition comprising 1.315 μM modified PKOBPgpLYS and 0.5 mM EDTA. In FIG. 5A the antibacterial activity on Escherichia coli WK 6 cells is represented, in FIG. 5B the antibacterial activity on Salmonella typhimurium LT2 (SGSC N° 2317) cells, in FIG. 5C the antibacterial activity on Pseudomonas aeruginosa PAO1p cells, in FIG. 5D the antibacterial activity on Pseudomonas aeruginosa Br667 cells, in FIG. 5E the antibacterial activity on Pseudomonas putida G1 cells and in FIG. 5F the antibacterial activity on Burkholderia pseudomallei cells. "Δ" gives the difference of antibacterial activity between the respective OBPgpLYS and PKOBPgpLYS samples. The error bars render the standard deviations of the mean.
[0018] FIG. 6 shows in a graphic representation the host specificity of the unmodified OBPgpLYS (SEQ ID NO: 47) and the modified PKOBPgpLYS (SEQ ID NO: 49). Each species of Gram-negative bacteria was incubated for 30 minutes with a composition comprising each 1.315 μM unmodified OBPgpLYS or modified PKOBPgpLYS. The bar chart gives the antibacterial activities of the unmodified OBPgpLYS and modified OBPgpLYS on Pseudomonas aeruginosa PAO1p cells (PAO1), Escherichia coli WK6 cells (wk6), Burkholderia pseudomallei cells (Burk pseudo), Pseudomonas aeruginosa Br667 cells (Br667), Salmonella typhimurium LT2 cells (LT2) and Pseudomonas putida G1 cells (Ppu G1). The error bars indicate the standard deviations of the mean.
DETAILED DESCRIPTION OF THE INVENTION
[0019] The term "protein" as used herein refers synonymously to the term "polypeptide". The term "protein" as used herein refers to a linear polymer of amino acid residues linked by peptide bonds in a specific sequence. The amino-acid residues of a protein may be modified by e.g. covalent attachments of various groups such as carbohydrates and phosphate. Other substances may be more loosely associated with the polypeptide chains, such as heme or lipid, giving rise to the conjugated proteins which are also comprised by the term "protein" as used herein. The various ways in which the polypeptide chains fold have been elucidated, in particular with regard to the presence of alpha helices and beta-pleated sheets. The term "protein" as used herein refers to all four classes of proteins being all-alpha, all-beta, alpha/beta and alpha plus beta.
[0020] The term "fusion protein" as used herein refers to an expression product resulting from the fusion of two nucleic acid sequences. Such a protein may be produced, e.g., in recombinant DNA expression systems. Moreover, the term "fusion protein" as used herein refers to a fusion of a first amino acid sequence as e.g. an endolysin, with a second or further amino acid sequence. The second or further amino acid sequence is preferably a peptide stretch, in particular a cationic peptide, a polycationic peptide, an amphipatic peptide, a sushi peptide, a defensin, a hydrophobic peptide or an antimicrobial peptide. Preferably, said second and/or further amino acid sequence is foreign to and not substantially homologous with any domain of the first amino acid sequence.
[0021] The term "peptide stretch" as used herein refers to any kind of peptide linked to a protein such as an endolysin. In particular the term "peptide stretch" as used herein refers to a cationic peptide, a polycationic peptide, an amphipatic peptide, a sushi peptide, a defensin, a hydrophobic peptide and/or an antimicrobial peptide. However, a peptide stretch in the meaning of the present invention does not refer to His6-tags, Strep-tags, Avi-tags, Myc-tags, Gst-tags, JS-tags, cystein-tags, FLAG-tags or other tags known in the art, thioredoxin or maltose binding proteins (MBP). The term "tag" in contrast to the term "peptide stretch" as used herein refers to a peptide which can be useful to facilitate expression and/or affinity purification of a polypeptide, to immobilize a polypeptide to a surface or to serve as a marker or a label moiety for detection of a polypeptide e.g. by antibody binding in different ELISA assay formats as long as the function making the tag useful for one of the above listed facilitation is not caused by the positively charge of said peptide. However, the His6-tag may, depending on the respective pH, also be positively charged, but is used as affinity purification tool as it binds to immobilized divalent cations and is not used as a peptide stretch according to the present invention.
[0022] The term "peptide" as used herein refers to short polypeptides consisting of from about 2 to about 100 amino acid residues, more preferably from about 4 to about 50 amino acid residues, more preferably from about 5 to about 30 amino acid residues, wherein the amino group of one amino acid residue is linked to the carboxyl group of another amino acid residue by a peptide bond. A peptide may have a specific function. A peptide can be a naturally occurring peptide or a synthetically designed and produced peptide. The peptide can be, for example, derived or removed from a native protein by enzymatic or chemical cleavage, or can be prepared using conventional peptide synthesis techniques (e.g., solid phase synthesis) or molecular biology techniques (see Sambrook, J. et al., Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Press, Cold Spring Harbor, N.Y. (1989)). Preferred naturally occurring peptides are e.g. antimicrobial peptides, defensins, and sushi peptides. Preferred synthetically produced peptides are e.g. polycationic, amphiphatic or hydrophobic peptides. A peptide in the meaning of the present invention does not refer to His-tags, Strep-tags, thioredoxin or maltose binding proteins (MBP) or the like, which are used to purify or locate proteins.
[0023] The term "endolysin" as used herein refers to an enzyme which is suitable to hydrolyse bacterial cell walls. "Endolysins" comprise at least one "enzymatically active domain" (EAD) having at least one of the following activities: endopeptidase, N-acetyl-muramoyl-L-alanine-amidase (amidase), N-acetyl-muramidase, N-acetyl-glucosaminidase (lysozyme) or transglycosylases. In addition, the endolysins may contain also regions which are enzymatically inactive, and bind to the cell wall of the host bacteria, the so-called CBDs (cell wall binding domains). The endolysin may contain two or more CBDs. However, the term "endolysin" as used herein refers also to enzymes having at least one EAD but no CBDs. Generally, the cell wall binding domain is able to bind different components on the surface of bacteria. Preferably, the cell wall binding domain is a peptidoglycan binding domain and binds to the bacteria's peptidoglycan structure. The different domains of an endolysin can be connected by a domain linker.
[0024] The term "domain linker" as used herein refers to an amino acid sequence functioning to connect single protein domains with one another. As a rule domain linkers form no or only few regular secondary structure like α-helices or β-sheets and can occupy different conformations with the respective structural context. Methods to detect domain linker and properties of linker sequences are well known in the art as e.g. described in Bae et al., 2005, Bioinformatics, 21, 2264-2270 or George & Heringa, 2003, Protein Engineering, 15, 871-879.
[0025] The term "wild type" or "wt" as used herein refers to the amino acid sequence of the endolysin OBPgpLYS as depicted in SEQ ID NO: 86. The nucleic acid sequence encoding the wild type endolysin OBPgpLYS is depicted in SEQ ID NO: 101.
[0026] The term "deletion" as used herein refers to the removal of 1, 2, 3, 4, 5 or more amino acid residues from the respective starting sequence.
[0027] The term "insertion" or "addition" as used herein refers to the insertion or addition of 1, 2, 3, 4, 5 or more amino acid residues to the respective starting sequence.
[0028] The term "substitution" as used herein refers to the exchange of an amino acid residue located at a certain position for a different one.
[0029] The term "cell wall" as used herein refers to all components that form the outer cell enclosure of the Gram-negative bacteria and thus guarantee their integrity. In particular, the term "cell wall" as used herein refers to peptidoglycan, the outer membrane of the Gram-negative bacteria with the lipopolysaccharide, the bacterial cell membrane, but also to additional layers deposited on the peptidoglycan as e.g. capsules, outer protein layers or slimes.
[0030] The term "EAD" as used herein refers to the enzymatically active domain of an endolysin. The EAD is responsible for hydrolysing bacterial peptidoglycans. It exhibits at least one enzymatic activity of an endolysin. The EAD can also be composed of more than one enzymatically active module. The term "EAD" is used herein synonymously with the term "catalytic domain".
[0031] As used herein, the term "cationic peptide" refers to a peptide having positively charged amino acid residues. Preferably a cationic peptide has a pKa-value of 9.0 or greater. Typically, at least four of the amino acid residues of the cationic peptide can be positively charged, for example, lysine or arginine. "Positively charged" refers to the side chains of the amino acid residues which have a net positive charge at about physiological conditions. The term "cationic peptide" as used herein refers also to polycationic peptides.
[0032] The term "polycationic peptide" as used herein refers to a synthetically produced peptide composed of mostly positively charged amino acid residues, in particular lysine and/or arginine residues. A peptide is composed of mostly positively charged amino acid residues if at least about 20, 30, 40, 50, 60, 70, 75, 80, 85, 90, 95 or about 100% of the amino acid residues are positively charged amino acid residues, in particular lysine and/or arginine residues. The amino acid residues being not positively charged amino acid residues can be neutrally charged amino acid residues and/or negatively charged amino acid residues and/or hydrophobic amino acid residues. Preferably the amino acid residues being not positively charged amino acid residues are neutrally charged amino acid residues, in particular serine and/or glycine.
[0033] The term, "antimicrobial peptide" (AMP) as used herein refers to any peptide that has microbicidal and/or microbistatic activity. Thus, the term "antimicrobial peptide" as used herein refers in particular to any peptide having anti-bacterial, anti-fungal, anti-mycotic, anti-parasitic, anti-protozoal, anti-viral, anti-infectious, anti-infective and/or germicidal, algicidal, amoebicidal, microbicidal, bactericidal, fungicidal, parasiticidal, protozoacidal, protozoicidal properties.
[0034] The term "defensin" as used herein refers to a peptide present within animals, preferably mammals, more preferably humans, wherein the defensin plays a role in the innate host defense system as the destruction of foreign substances such as infectious bacteria and/or infectious viruses and/or fungi. A defensin is a non-antibody microbicidal and/or tumoricidal protein, peptide or polypeptide. Examples for "defensins" are "mammalian defensins," alpha-defensins, beta-defensins, indolicidin and magainins. The term "defensins" as used herein refers both to an isolated form from animal cells or to a synthetically produced form, and refers also to variants which substantially retain the cytotoxic activities of their parent proteins, but whose sequences have been altered by insertion or deletion of one or more amino acid residues.
[0035] The term "sushi peptide" as used herein refers to complement control proteins (CCP) having short consensus repeats. The sushi module of sushi peptides functions as a protein-protein interaction domain in many different proteins. Peptides containing a Sushi domain have been shown to have antimicrobial activities.
[0036] The term "amphipathic peptide" as used herein refers to peptides having both hydrophilic and hydrophobic functional groups. Preferably, the term "amphipathic peptide" as used herein refers to a peptide having a defined arrangement of hydrophilic and hydrophobic groups e.g. amphipatic peptides may be e.g. alpha helical, having predominantly non polar side chains along one side of the helix and polar residues along the remainder of its surface.
[0037] The term "hydrophobic group" as used herein refers to chemical groups such as amino acid side chains which are substantially water insoluble, but soluble in an oil phase, with the solubility in the oil phase being higher than that in water or in an aqueous phase. In water, amino acid residues having a hydrophobic side chain interact with one another to generate a nonaqueous environment. Examples of amino acid residues with hydrophobic side chains are valine, isoleucine, leucine, methionine, phenylalanine, tryptophan, cysteine, alanine, tyrosine, histidine, threonin, serine, proline and glycine residues.
[0038] The present invention relates to new antibacterial agents against Gram-negative bacteria. In particular the present invention relates to a polypeptide comprising an amino acid sequence according to SEQ ID NO: 1 or fragments or derivatives thereof. The polypeptide comprising an amino acid sequence according to SEQ ID NO: 1 is preferably encoded by a nucleotide sequence according to SEQ ID NO: 3.
[0039] The endolysin OBPgpLYS having an amino acid sequence according to SEQ ID NO: 1 has a length of 328 amino acids. It comprises a N-terminal cell wall binding domain (CBD) and a C-terminal enzymatic active domain (EAD). The N-terminal CBD is a peptidoglycan binding domain (PGB, aa 7-96) having an amino acid sequence according to SEQ ID NO: 4. The C-terminal EAD is a catalytic domain (aa 126-292) complying with the catalytic domain of the lysozyme-like superfamily and having an amino acid sequence according to SEQ ID NO: 5. The PGB and the catalytic domain of the endolysin OBPgpLYS are connected by a domain linker.
[0040] Thus, preferred fragments of the polypeptide according to the present invention are polypeptides comprising an amino acid sequence according to SEQ ID NO: 4 and/or according to SEQ ID NO: 5. Another preferred fragment of the polypeptide according to the present invention comprises an amino acid sequence according to SEQ ID NO: 69. The fragment having an amino acid sequence according to SEQ ID NO: 69 differs from the polypeptide having an amino acid sequence according to SEQ ID NO: 1 in that the starting methionine residue has been deleted.
[0041] The derivatives according to the present invention are polypeptides comprising an amino acid sequence according to SEQ ID NO: 1, 4, 5 and/or 69 but having additional modification and/or alterations. Said modifications and/or alterations can be mutations in particular deletions, insertions, additions, substitutions or any combinations thereof and/or chemical changes of the amino acid residues, e.g. biotinylation, acetylation, pegylation, chemical changes of the amino-, SH- or carboxyl-groups. Said derivatives according to the present invention exhibit the lytic activity of the OBPgpLYS (SEQ ID NO: 1) and/or the activity of the fragments according to the present invention. Said activity can be about 10, 20, 30, 40, 50, 60, 70, 80, 90, 100, 110, 120, 130, 140, 150, 160, 170, 180, 190 or about 200% of the activity of the OBPgpLYS and/or the activity of the fragments according to the present invention. The activity can be measured by assays well known in the art by a person skilled in the art as e.g. the plate lysis assay or the liquid lysis assay which are e.g. described in (Briers et al., J. Biochem. Biophys Methods 70: 531-533, (2007)).
[0042] Preferred derivatives according to the present invention are polypeptides comprising an amino acid sequence according to SEQ ID NO: 86 and 87. Said derivatives differ from the polypeptides having an amino acid sequence according to SEQ ID NO: 1 and SEQ ID NO: 69, respectively, in that the leucine residue has been substituted by a histidine residue at positions 325 and 324, respectively. The polypeptide comprising an amino acid sequence according to SEQ ID NO: 86 is preferably encoded by a nucleotide sequence according to SEQ ID NO: 101.
[0043] In a preferred embodiment of the present invention the polypeptide, fragment and/or derivative according to the present invention comprises additionally a tag such as a His6-tag, Strep-tag, Avi-tag, Myc-tag, Gst-tag, JS-tag, cystein-tag, FLAG-tag or other tags known in the art at the N-terminus or at the C-terminus. In a preferred embodiment of the present invention said tag is linked to the polypeptide, fragment and/or derivative according to the present invention at the C-terminus. Said tag may be linked to said polypeptide, fragment and/or derivative over additional amino acid residues. Said additional amino acid residues may be consist of at least 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 additional amino acid residues. In a preferred embodiment of the present invention the tag is linked to the polypeptide, fragment and/or derivative according to the present invention by the additional amino acid residues Leu-Glu or Lys-Gly.
[0044] In a preferred embodiment the present invention relates to polypeptides comprising an amino acid sequence according to SEQ ID NO: 47 or SEQ ID NO: 88. The polypeptide having an amino acid sequence according to SEQ ID NO: 47 and SEQ ID NO: 88, respectively, comprises in comparison to the polypeptide having an amino acid sequence according to SEQ ID NO: 1 and SEQ ID NO: 86, respectively, an additional C-terminal His6-tag linked to the C-terminus of the polypeptide having an amino acid sequence according to SEQ ID NO: 1 and SEQ ID NO: 86, respectively, by the additional amino acid residues lysine and glycine (Lys-Gly). The polypeptide comprising an amino acid sequence according to SEQ ID NO: 47 is preferably encoded by a nucleotide sequence according to SEQ ID NO: 48. The polypeptide comprising an amino acid sequence according to SEQ ID NO: 88 is preferably encoded by a nucleotide sequence according to SEQ ID NO: 89.
[0045] A further aspect of the present invention are fusion proteins composed of an polypeptide, fragment and/or derivative according to the present invention and a peptide stretch fused to the polypeptide, fragment and/or derivative according to the present invention at the N- or C-terminus.
[0046] The peptide stretch of the fusion protein according to the present invention is preferably covalently bound to the polypeptide, fragment and/or derivative according to the present invention. Preferably, said peptide stretch consists of at least 5, more preferably at least of 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99 or at least 100 amino acid residues. Especially preferred is a peptide stretch comprising about 5 to about 100 amino acid residues, about 5 to about 50 or about 5 to about 30 amino acid residues. More preferred is a peptide stretch comprising about 6 to about 42 amino acid residues, about 6 to about 39 amino acid residues, about 6 to about 38 amino acid residues, about 6 to about 31 amino acid residues, about 6 to about 25 amino acid residues, about 6 to about 24 amino acid residues, about 6 to about 22 amino acid residues, about 6 to about 21 amino acid residues, about 6 to about 20 amino acid residues, about 6 to about 19 amino acid residues, about 6 to about 16 amino acid residues, about 6 to about 14 amino acid residues, about 6 to about 12 amino acid residues, about 6 to about 10 amino acid residues or about 6 to about 9 amino acid residues. Preferably, the peptide stretch is no tag such as a His6-tag, Strep-tag, Avi-tag, Myc-tag, Gst-tag, JS-tag, cystein-tag, FLAG-tag or other tags known in the art and no thioredoxin or maltose binding proteins (MBP). However, the peptide stretch may comprise in addition such tag or tags or the like, which are used to purify or locate proteins.
[0047] Preferably, the peptide stretch has the function to lead the fusion protein according to the present invention through the outer membrane of Gram-negative bacteria but has no or only low activity when administered without being fused to the polypeptide, fragment and/or derivative according to the present invention. The function to lead the fusion protein through the outer membrane of Gram-negative bacteria is caused by the potential of the membrane or LPS disrupting activity of said peptide stretch. To determine whether a peptide stretch has membrane or LPS disrupting activity said peptide stretch can be fused to a polypeptide according to the present invention as e.g. described in the Examples of the present invention. Subsequently, the antibacterial activity of the fusion protein consisting of the polypeptide according to the present invention and the peptide stretch to be tested can be compared to the polypeptide according the present invention having no peptide stretch as also described in the Examples of the present invention and e.g. shown in FIGS. 5A-5F and 6. Preferably, said tests may be carried out on Escherichia coli WK6 and/or Pseudomonas aeruginosa PAO1p cells as used in the Examples of the present invention. In case the fusion protein has an increased antibacterial activity in comparison to the polypeptide according to the present invention without said peptide stretch for at least one of the tested gram-negative bacteria species then said peptide stretch has a membrane or LPS disrupting activity. Preferably, the antibacterial activity (in logarithmic units (=log10N0/Ni)) of the polypeptide according to the present invention is increased by at least about 5%, more preferably by at least about 10%, by a peptide stretch having membrane or LPS disrupting activity.
[0048] In one aspect of the present invention the fused peptide stretch is an amphipathic peptide, which comprises one or more of the positively charged amino acid residues of lysine, arginine and/or histidine, combined to one or more of the hydrophobic amino acid residues of valine, isoleucine, leucine, methionine, phenylalanine, tryptophan, cysteine, alanine, tyrosine, histidine, threonin, serine, proline and/or glycine. Side chains of the amino acid residues are preferably oriented in order that cationic and hydrophobic surfaces are clustered at opposite sides of the peptide. Preferably, more than about 30, 40, 50, 60 or 70% of the amino acids in said peptide are positively charged amino acids. Preferably, more than about 30, 40, 50, 60 or 70% of the amino acid residues in said peptide are hydrophobic amino acid residues. Advantageously, the amphipathic peptide is fused at the N-terminal and/or the C-terminal end of the polypeptide, fragment and/or derivative according to the present invention having cell wall degrading activity, thus enhancing the amphipathicity of the latter proteins.
[0049] In a preferred embodiment at least about 30, 40, 50, 60 or 70% of the said amino acid residues of the amphipathic peptide are either arginine or lysine residues and/or at least about 30, 40, 50, 60 or 70% of the said amino acid residues of the amphipathic peptide are of the hydrophobic amino acid residues valine, isoleucine, leucine, methionine, phenylalanine, tryptophan, cysteine, alanine, tyrosine, histidine, threonin, serine, proline and/or glycine.
[0050] Preferred amphipatic peptides are Pleurocidin according to SEQ ID NO: 6, Cecropin P1 according to SEQ ID NO: 7, Buforin II according to SEQ ID NO: 8, Buforin I according to SEQ ID NO: 9 and Magainin according to SEQ ID NO: 10. Further preferred amphipatic peptides are Cathelidicine e.g. LL-37 according to SEQ ID NO: 11.
[0051] In a further aspect of the present invention the fused peptide stretch is an antimicrobial peptide, which comprises a positive net charge and around 50% hydrophobic amino acid residues. The antimicrobial peptides are amphipathic, with a length of about 12 to about 50 amino acid residues.
[0052] Preferred antimicrobial peptides are listed in the following table.
TABLE-US-00001 Peptide Sequence LL-37 LLGDFFRKSKEKIGKEFKR SEQ ID NO: 11 IVQRIKDFLRNLVPRTES SMAP-29 RGLRRLGRKIAHGVKKYGP SEQ ID NO: 12 TVLRIIRIAG Indolicidin ILPWKWPWWPWRR SEQ ID NO: 13 Protegrin RGGRLCYCRRRFCVCVGR SEQ ID NO: 14 Cecropin P1 SWLSKTAKKLENSAKKRIS SEQ ID NO: 7 EGIAIAIQGGPR Magainin GIGKFLHSAKKFGKAFVGE SEQ ID NO: 10 IMNS Pleurocidin GWGSFFKKAAHVGKHVGKA SEQ ID NO: 6 ALTHYL Cecropin A GGLKKLGKKLEGAGKRVFN SEQ ID NO: 15 (A. aegypti) AAEKALPVVAGAKALRK Cecropin A GWLKKIGKKIERVGQHTRD SEQ ID NO: 16 (D. ATIQGLGIPQQAANVAATA melanogaster) RG Buforin II TRSSRAGLQFPVGRVHRLL SEQ ID NO: 8 RK Sarcotoxin IA GWLKKIGKKIERVGQHTRD SEQ ID NO: 17 ATIQGLGIAQQAANVAATA R Ascaphine GIKDWIKGAAKKLIKTVAS SEQ ID NO: 50 HIANQ Apidaecine ANRPVYIPPPRPPHPRL SEQ ID NO: 51 Nigrocine GLLSKVLGVGKKVLCGVSG SEQ ID NO: 52 LVC Pseudin 1 GLNTLKKVFQGLHEAIKLI SEQ ID NO: 53 NNHVQ Parasin 1 KGRGKQGGKVRAKAKTRSS SEQ ID NO: 72 Lycotoxin IWLTALKFLGKHAAKKLAK SEQ ID NO: 73 QQLSKL Ranalexin FLGGLIVPAMICAVTKKC SEQ ID NO: 117 Melittin GIGAVLKVLTTGLPALIS SEQ ID NO: 119 WIKRKRQQ
[0053] In a further aspect of the present invention the fused peptide stretch is a sushi peptide which is described by Ding J L, Li P, Ho B Cell Mol Life Sci. 2008 Apr; 65(7-8):1202-19. The Sushi peptides: structural characterization and mode of action against Gram-negative bacteria.
[0054] Preferred sushi peptides are sushi peptides S1 and S3 and multiples thereof; FASEB J. 2000 Sep; 14(12):1801-13.
[0055] In a further aspect of the present invention the fused peptide stretch is a defensin, preferably Cathelicidine, Cecropin P1, Cecropin A or Magainin II.
[0056] In a further aspect of the present invention the fused peptide stretch is a hydrophobic peptide, preferably having the amino acid sequence Phe-Phe-Val-Ala-Pro (SEQ ID NO:18).
[0057] Further preferred peptide stretches are listed in the following table:
TABLE-US-00002 Alpha 4 PNRAKRVITTFRT SEQ ID NO: 68 Artilysin1 GFFIPAVILPSIAFLIVP SEQ ID NO: 70 Artilysin2 GKPGWLIKKALVFKKLIR SEQ ID NO: 71 RPLKRLA WLBU2 KRWVKRVKRVKRWVKRVV SEQ ID NO: 118 variant RVVKRWVKR
[0058] In one aspect of the present invention the fused peptide stretch is an cationic and/or polycationic peptide, which comprises one or more of the positively charged amino acid residues of lysine, arginine and/or histidine, in particular of lysine and/or arginine. Preferably, more than about 20, 30, 40, 50, 60, 70, 75, 80, 85, 90, 95 or 99% of the amino acid residues in said peptide stretch are positively charged amino acid residues, in particular lysine and/or arginine residues. Especially preferred are peptide stretches consisting of about 100% positively charged amino acid residues, in particular arginine and/or lysine residues, wherein preferably about 60% to about 70% of said positively charged amino acid residues are lysine residues and about 30% to about 40% of said positively charged amino acid residues are arginine residues. More preferred is a peptide stretch consisting of about 100% positively charged amino acid residues, in particular arginine and/or lysine residues, wherein preferably about 64% to about 68% of said positively charged amino acid residues are lysine and about 32% to about 36% of said positively charged amino acid residues are arginine. Peptide stretches consisting of either only arginine or only lysine are also preferred.
[0059] Especially preferred are cationic and/or polycationic peptide stretches comprising at least one motif according to SEQ ID NO: 19 (KRKKRK). In particular cationic peptide stretches comprising at least 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16 or 17 motifs according to SEQ ID NO: 19 (KRKKRK) are preferred. More preferred are cationic peptide stretches comprising at least one KRK motif (lys-arg-lys), preferable at least 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32 or 33 KRK motifs.
[0060] In another preferred embodiment of the present invention the cationic peptide stretch comprises beside the positively charged amino acid residues, in particular lysine and/or arginine residues, neutrally charged amino acid residues, in particular glycine and/or serine residues. Preferred are cationic peptide stretches consisting of about 70% to about 100%, or about 80% to about 95%, or about 85% to about 90% positively charged amino acid residues, in particular lysine and/or arginine residues and of about 0% to about 30%, or about 5% to about 20%, or about 10% to about 20% neutrally charged amino acid residues, in particular glycine and/or serine residues. Preferred are polypeptide stretches consisting of about 4% to about 8% serine residues, of about 33% to about 36% arginine residues and of about 56% to about 63% lysine residues. Especially preferred are polypeptide stretches comprising at least one motif according to SEQ ID NO: 40 (KRXKR), wherein X is any other amino acid residue than lysine, arginine and histidine. Especially preferred are polypeptide stretches comprising at least one motif according to SEQ ID NO: 41 (KRSKR). More preferred are cationic stretches comprising at least about 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19 or about 20 motifs according to SEQ ID NO: 40 (KRXKR) or SEQ ID NO: 41 (KRSKR).
[0061] Also preferred are polypeptide stretches consisting of about 9 to about 16% glycine residues, of about 4 to about 11% serine residues, of about 26 to about 32% arginine residues and of about 47 to about 55% lysine residues. Especially preferred are polypeptide stretches comprising at least one motif according to SEQ ID NO: 42 (KRGSG). More preferred are cationic stretches comprising at least about 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19 or about 20 motifs according to SEQ ID NO: 42 (KRGSG).
[0062] In another preferred embodiment of the present invention the cationic peptide stretch comprises beside the positively charged amino acid residues, in particular lysine and/or arginine residues, hydrophobic amino acid residues, in particular valine, isoleucine, leucine, methionine, phenylalanine, tryptophan, cysteine, alanine, tyrosine, histidine, threonin, serine, proline and/or glycine residues. Preferred are cationic peptide stretches consisting of about 70% to about 100%, or about 80% to about 95%, or about 85% to about 90% positively charged amino acid residues, in particular lysine and/or arginine residues and of about 0% to about 30%, or about 5% to about 20%, or about 10% to about 20% hydrophobic amino acid residues in particular valine, isoleucine, leucine, methionine, phenylalanine, tryptophan, cysteine, alanine, tyrosine, histidine, threonin, serine, proline and/or glycine residues.
[0063] Especially preferred are peptide stretches selected from the group consisting of the following sequences:
TABLE-US-00003 Peptide stretch length SEQ ID NO: KRKKRK 6 SEQ ID NO: 19 KRKKRKKRK 9 SEQ ID NO: 20 RRRRRRRRR 9 SEQ ID NO: 21 KKKKKKKK 8 SEQ ID NO: 22 KRKKRKKRKK 10 SEQ ID NO: 23 KRKKRKKRKKRK 12 SEQ ID NO: 24 KRKKRKKRKKRKKR 14 SEQ ID NO: 25 KKKKKKKKKKKKKKKK 16 SEQ ID NO: 26 KRKKRKKRKKRKKRKKRKK 19 SEQ ID NO: 27 RRRRRRRRRRRRRRRRRRR 19 SEQ ID NO: 28 KKKKKKKKKKKKKKKKKKK 19 SEQ ID NO: 29 KRKKRKKRKRSKRKKRKKRK 20 SEQ ID NO: 30 KRKKRKKRKRSKRKKRKKRKK 21 SEQ ID NO: 31 KRKKRKKRKKRKKRKKRKKRK 21 SEQ ID NO: 32 KRKKRKKRKRGSGKRKKRKKRK 22 SEQ ID NO: 33 KRKKRKKRKRGSGSGKRKKRKKRK 24 SEQ ID NO: 34 KRKKRKKRKKRKKRKKRKKRKKRKK 25 SEQ ID NO: 35 KRKKRKKRKRSKRKKRKKRKRSKRK 31 SEQ ID NO: 36 KRKKRK KRKKRKKRKRGSGSGKRKKRKKRKG 38 SEQ ID NO: 37 SGSGKRKKRKKRK KRKKRKKRKKRKKRKKRKKRKKRKK 39 SEQ ID NO: 38 RKKRKKRKKRKKRK KRKKRKKRKRSKRKKRKKRKRSKRK 42 SEQ ID NO: 39 KRKKRKRSKRKKRKKRK
[0064] Especially preferred is a fusion protein comprising a polypeptide, fragment and/or derivative according to the present invention and a peptide stretch having an amino acid sequence according to SEQ ID NO: 20. More preferred are fusion proteins having an amino acid sequence according to SEQ ID NO: 43 and SEQ ID NO: 115. Also preferred are fusion proteins an amino acid sequence according to SEQ ID NO: 49 and SEQ ID NO: 116. The fusion proteins having an amino acid sequence according to SEQ ID NO: 49 and SEQ ID NO: 116, respectively, comprises in comparison to the fusion proteins having an amino acid sequence according to SEQ ID NO: 43 and SEQ ID NO: 115, respectively, an additional C-terminal His6-tag linked to the C-terminus of the fusion protein having an amino acid sequence according to SEQ ID NO: 43 and SEQ ID NO: 115, respectively, by the additional amino acid residues lysine and glycine (Lys-Gly). The fusion proteins having an amino acid sequence according to SEQ ID NO: 43 and SEQ ID NO: 115 and SEQ ID NO: 49 and SEQ ID NO: 116, respectively, differ in that the fusion proteins having an amino acid sequence according to SEQ ID NO: 115 and SEQ ID NO: 116 has each a substitution of the leucine residue to a histidine residue at position 336.
[0065] In another preferred embodiment of the present invention the peptide stretches of the fusion protein according to the present invention comprise modifications and/or alterations of the amino acid sequences. Such alterations and/or modifications may comprise mutations such as deletions, insertions and additions, substitutions or combinations thereof and/or chemical changes of the amino acid residues, e.g. biotinylation, acetylation, peglyation, chemical changes of the amino-, SH- or carboxyl-groups.
[0066] A fusion protein according to the present invention as already outlined above is composed of
[0067] (a) an polypeptide, fragment and/or derivative according to the present invention, and
[0068] (b) a peptide stretch fused to said polypeptide, fragment and/or derivative at the N- or C-Terminus, and optionally
[0069] (c) a tag, such as a His6-tags, Strep-tags, Avi-tags, Myc-tags, Gst-tags, JS-tags, cystein-tags, FLAG-tags or other tags known in the art at the N- or C-Terminus.
[0070] In case the peptide stretch is fused to the polypeptide, fragment and/or derivative according to the present invention at the C-Terminus, the fusion protein comprises the additional tag preferably at the N-terminus. In an especially preferred embodiment of the present invention the peptide stretch is fused to the polypeptide, fragment and/or derivative according to the present invention at the N-Terminus. In case said fusion protein comprises an additional tag said tag is preferably at the C-terminus.
[0071] The two and three components of the fusion protein, respectively, as outlined above may be linked to each other over additional amino acid residues e.g. due to cloning reasons. Moreover, the peptide stretch may be linked to the starting methionine residue of the fusion protein by additional amino acid residues. Said additional amino acid residues may be consist of at least 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 additional amino acid residues. In a preferred embodiment of the present invention the peptide stretch is linked to the polypeptide, fragment and/or derivative according to the present invention by the additional amino acid residues Gly-Ser or Gly-Gly-Ser. The additional amino acid residues linking the starting methionine residue and the peptide stretch are preferably Gly-Ser. In case the fusion protein additionally comprises a tag, the polypeptide, fragment and/or derivative according to the present invention is preferably linked to said tag by the additional amino acid residues Leu-Glu or Lys-Gly.
[0072] The following table exemplifies the above outlined assembly of specifically preferred fusion proteins according to the present invention listed in the first column starting with the starting methionine residue at the N-terminus in the second column and ending with the optional tag at the C-terminus in the last column:
TABLE-US-00004 Fusion protein polypeptide, fragment, according to the First amino additional peptide additional derivative according to additional present invention acid residue amino acid stretch amino acid the present invention amino acid tag (SEQ ID NO:) (N-term) residues (SEQ ID NO:) residues (SEQ ID NO:) residues (C- term) SEQ: 43 Met -- SEQ: 20 Gly-Ser SEQ: 69 -- -- SEQ: 49 Met -- SEQ: 20 Gly-Ser SEQ: 69 Lys-Gly HIS6-tag SEQ: 54 Met -- SEQ: 50 Gly-Ser SEQ: 87 -- -- SEQ: 55 Met -- SEQ: 50 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 56 Met -- SEQ: 51 Gly-Ser SEQ: 87 -- -- SEQ: 57 Met -- SEQ: 51 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 58 Met -- SEQ: 52 Gly-Ser SEQ: 87 -- -- SEQ: 59 Met -- SEQ: 52 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 60 Met -- SEQ: 53 Gly-Ser SEQ: 87 -- -- SEQ: 61 Met -- SEQ: 53 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 62 Met -- SEQ: 17 Gly-Ser SEQ: 87 -- -- SEQ: 63 Met -- SEQ: 17 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 64 Met -- SEQ: 12 Gly-Ser SEQ: 87 -- -- SEQ: 65 Met -- SEQ: 12 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 66 Met -- SEQ: 15 Gly-Ser SEQ: 87 -- -- SEQ: 67 Met -- SEQ: 15 Gly-Ser SEQ: 87 Leu-Glu HIS6-tag SEQ: 74 Met Gly-Ser SEQ: 68 Gly-Ser-Ser SEQ: 87 -- -- SEQ: 75 Met Gly-Ser SEQ: 68 Gly-Ser-Ser SEQ: 87 Lys-Gly HIS6-tag SEQ: 76 Met Gly-Ser SEQ: 69 Gly-Ser-Ser SEQ: 87 -- -- SEQ: 77 Met Gly-Ser SEQ: 69 Gly-Ser-Ser SEQ: 87 Lys-Gly HIS6-tag SEQ: 78 Met Gly-Ser SEQ: 70 Gly-Ser-Ser SEQ: 87 -- -- SEQ: 79 Met Gly-Ser SEQ: 70 Gly-Ser-Ser SEQ: 87 Lys-Gly HIS6-tag SEQ: 80 Met Gly-Ser SEQ: 71 Gly-Ser-Ser SEQ: 87 -- -- SEQ: 81 Met Gly-Ser SEQ: 71 Gly-Ser-Ser SEQ: 87 Lys-Gly HIS6-tag SEQ: 82 Met Gly-Ser SEQ: 72 Gly-Ser-Ser SEQ: 87 -- -- SEQ: 83 Met Gly-Ser SEQ: 72 Gly-Ser-Ser SEQ: 87 Lys-Gly HIS6-tag SEQ: 84 Met Gly-Ser SEQ: 73 Gly-Ser-Ser SEQ: 87 -- -- SEQ: 85 Met Gly-Ser SEQ: 73 Gly-Ser-Ser SEQ: 87 Lys-Gly HIS6-tag SEQ: 115 Met -- SEQ: 20 Gly-Ser SEQ: 87 -- -- SEQ: 116 Met -- SEQ: 20 Gly-Ser SEQ: 87 Lys-Gly HIS6-tag
[0073] The present invention further relates to an isolated nucleic acid molecule encoding the polypeptide, fragment, derivative and/or fusion protein according to the present invention. Especially preferred isolated nucleic acid molecules according to the present invention comprise a nucleic acid sequence according to SEQ ID NO: 2, 3, 48, 89 or 101. The present invention further relates to a vector comprising the nucleic acid molecule according to the present invention. Said vector may provide for the constitutive or inducible expression of said polypeptide, fragment, derivative and/or fusion protein according to the present invention.
[0074] The invention also relates to a method for obtaining said polypeptide, fragment, derivative and/or fusion proteins from a micro-organism, such as a genetically modified suitable host cell which expresses said polypeptide, fragment, derivative and/or fusion proteins. Said host cell may be a micro-organism such as bacteria or yeast or an animal cell as e.g. a mammalian cell, in particular a human cell. In one embodiment of the present invention the host cell is an Escherichia coli cell. The host may be selected due to mere biotechnological reasons, e.g. yield, solubility, costs, etc. but may be also selected from a medical point of view, e.g. a non-pathological bacteria or yeast or human cells. Another aspect of the present invention is related to a method for genetically transforming a suitable host cell in order to obtain the expression of the polypeptide, fragment, derivative and/or fusion proteins according to the present invention, wherein the host cell is genetically modified by the introduction of a genetic material encoding said polypeptide, fragment, derivative and/or fusion proteins into the host cell and obtain their translation and expression by genetic engineering methods well known by the man skilled in the art.
[0075] In a further aspect the present invention relates to a composition, preferably a pharmaceutical composition, comprising a polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or a host transformed with a nucleic acid molecule or a vector comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention.
[0076] In a preferred embodiment of the present invention the composition comprises additionally agents permeabilizing the outer membrane of Gram-negative bacteria such metal chelators as e.g. EDTA, TRIS, lactic acid, lactoferrin, polymyxin, citric acid and/or other substances as described e.g. by Vaara (Agents that increase the permeability of the outer membrane. Vaara M. Microbiol Rev. 1992 Sep; 56(3):395-441). Also preferred are compositions comprising combinations of the above mentioned permeabilizing agents. Especially preferred is a composition comprising about 10 μM to about 100 mM EDTA, more preferably about 50 μM to about 10 mM EDTA, more preferably about 0.5 mM to about 10 mM EDTA, more preferably about 0.5 mM to about 2 mM EDTA, more preferably about 0.5 mM to about 1 mM EDTA. Also preferred is a composition comprising about 0.5 mM to about 2 mM EDTA, more preferably about 1 mM EDTA and additionally about 10 to about 100 mM TRIS.
[0077] The present invention also relates to a polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or a host transformed with a nucleic acid comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention for use as a medicament. In a further aspect the present invention relates to the use of a polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or a host transformed with a vector comprising a nucleic acid molecule comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention in the manufacture of a medicament for the treatment and/or prevention of a disorder, disease or condition associated with Gram-negative bacteria. In particular the treatment and/or prevention of the disorder, disease or condition may be caused by Gram-negative bacteria of bacterial groups, families, genera or species comprising strains pathogenic for humans or animals like Enterobacteriaceae (Escherichia, especially E. coli, Salmonella, Shigella, Citrobacter, Edwardsiella, Enterobacter, Hafnia, Klebsiella, especially K. pneumoniae, Morganella, Proteus, Providencia, Serratia, Yersinia), Pseudomonadaceae (Pseudomonas, especially P. aeruginosa, Burkholderia, Stenotrophomonas, Shewanella, Sphingomonas, Comamonas), Neisseria, Moraxella, Vibrio, Aeromonas, Brucella, Francisella, Bordetella, Legionella, Bartonella, Coxiella, Haemophilus, Pasteurella, Mannheimia, Actinobacillus, Gardnerella, Spirochaetaceae (Treponema and Borrelia), Leptospiraceae, Campylobacter, Helicobacter, Spirillum, Streptobacillus, Bacteroidaceae (Bacteroides, Fusobacterium, Prevotella, Porphyromonas), Acinetobacter, especially A. baumanii. In particular, the treatment and/or prevention of the disorder, disease or condition may be caused by Pseudomonas aeruginosa, Pseudomonas putida, Burkholderia pseudomallei, E. coli and/or Salmonella typhimurium.
[0078] The present invention further relates to a medicament comprising a polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or a host transformed with a nucleic acid comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention.
[0079] In a further aspect the present invention relates to a method of treating a disorder, disease or condition in a subject in need of treatment and/or prevention, which method comprises administering to said subject an effective amount of a polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or an effective amount of a host transformed with a nucleic acid comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention or a composition according to the present invention. The subject may be a human or an animal.
[0080] In particular said method of treatment may be for the treatment and/or prevention of infections of the skin, of soft tissues, the respiratory system, the lung, the digestive tract, the eye, the ear, the teeth, the nasopharynx, the mouth, the bones, the vagina, of wounds of bacteraemia and/or endocarditis caused by Gram-negative bacteria, in particular by the Gram-negative bacteria as listed above.
[0081] The dosage and route of administration used in a method of treatment (or prophylaxis) according to the present invention depends on the specific disease/site of infection to be treated. The route of administration may be for example oral, topical, nasopharyngeal, parenteral, intravenous, rectal or any other route of administration.
[0082] For application of a polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or an effective amount of a host transformed with a nucleic acid comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention or a composition according to the present invention to a site of infection (or site endangered to be infected) a formulation may be used that protects the active compounds from environmental influences such as proteases, oxidation, immune response etc., until it reaches the site of infection. Therefore, the formulation may be capsule, dragee, pill, suppository, injectable solution or any other medical reasonable galenic formulation. Preferably, the galenic formulation may comprise suitable carriers, stabilizers, flavourings, buffers or other suitable reagents. For example, for topical application the formulation may be a lotion or plaster, for nasopharyngeal application the formulation may be saline solution to be applied via a spray to the nose.
[0083] Preferably, a polypeptide, fragment, derivative and/or fusion protein according to the present invention is used for medical treatment, if the infection to be treated (or prevented) is caused by multiresistant bacterial strains, in particular by strains resistant against one or more of the following antibiotics: streptomycin, tetracycline, cephalothin, gentamicin, cefotaxime, cephalosporin, ceftazidime or imipenem. Furthermore, a polypeptide, fragment, derivative and/or fusion protein according to the present invention can be used in methods of treatment by administering it in combination with conventional antibacterial agents, such as antibiotics, lantibiotics, bacteriocins or endolysins, etc.
[0084] The present invention also relates to a pharmaceutical pack comprising one or more compartments, wherein at least one compartment comprises one or more polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or one or more hosts transformed with a nucleic acid comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention or a composition according to the present invention.
[0085] In another aspect the present invention relates to a process of preparation of a pharmaceutical composition, said process comprising admixing one or more polypeptide, fragment, derivative and/or fusion protein according to the present invention and/or one or more hosts transformed with a nucleic acid comprising a nucleotide sequence encoding a polypeptide, fragment, derivative and/or fusion protein according to the present invention with a pharmaceutically acceptable diluent, excipient or carrier.
[0086] In an even further aspect the composition according to the present invention is a cosmetic composition. Several bacterial species can cause irritations on environmentally exposed surfaces of the patient's body such as the skin. In order to prevent such irritations or in order to eliminate minor manifestations of said bacterial pathogens, special cosmetic preparations may be employed, which comprise sufficient amounts of the polypeptide, fragment, derivative and/or fusion protein according to the present invention in order to degrade already existing or freshly settling pathogenic Gram-negative bacteria.
[0087] In a further aspect the present invention relates to the polypeptide, fragment, derivative and/or fusion protein according to the present invention for use as diagnostic means in medicinal, food or feed or environmental diagnostics, in particular as a diagnostic means for the diagnostic of bacteria infection caused in particular by Gram-negative bacteria. In this respect the polypeptide, fragment, derivative and/or fusion protein according to the present invention may be used as a tool to specifically degrade pathogenic bacteria, in particular Gram-negative pathogenic bacteria. The degradation of the bacterial cells by the polypeptide, fragment, derivative and/or fusion protein according to the present invention can be supported by the addition of detergents like Triton X-100 or other additives which weaken the bacterial cell envelope like polymyxin B. Specific cell degradation is needed as an initial step for subsequent specific detection of bacteria using nucleic acid based methods like PCR, nucleic acid hybridization or NASBA (Nucleic Acid Sequence Based Amplification), immunological methods like IMS, immunofluorescence or ELISA techniques, or other methods relying on the cellular content of the bacterial cells like enzymatic assays using proteins specific for distinct bacterial groups or species (e.g. β-galactosidase for enterobacteria, coagulase for coagulase positive strains).
[0088] In a further aspect the present invention relates to the use of the polypeptide, fragment, derivative and/or fusion protein according to the present invention for the treatment or prevention of Gram-negative bacterial contamination of foodstuff, of food processing equipment, of food processing plants, of surfaces coming into contact with foodstuff such as shelves and food deposit areas and in all other situations, where pathogenic, facultative pathogenic or other undesirable bacteria can potentially infest food material, of medical devices and of all kind of surfaces in hospitals and surgeries.
[0089] In particular, a polypeptide, fragment, derivative and/or fusion protein of the present invention may be used prophylactically as sanitizing agent. Said sanitizing agent may be used before or after surgery, or for example during hemodialysis. Moreover, premature infants and immunocompromised persons, or those subjects with need for prosthetic devices may be treated with a fusion protein according to the present invention. Said treatment may be either prophylactically or during acute infection. In the same context, nosocomial infections, especially by antibiotic resistant strains like Pseudomonas aeruginosa (FQRP), Acinetobacter species and Enterobacteriaceae such as E. coli, Salmonella, Shigella, Citrobacter, Edwardsiella, Enterobacter, Hafnia, Klebsiella, Morganella, Proteus, Providencia, Serratia and Yersinia species may be treated prophylactically or during acute phase with a polypeptide, fragment, derivative and/or fusion protein of the present invention. Therefore, a polypeptide, fragment, derivative and/or fusion protein according to the present invention may be used as a disinfectant also in combination with other ingredients useful in a disinfecting solution like detergents, tensids, solvents, antibiotics, lantibiotics, or bacteriocins.
[0090] The following examples explain the present invention but are not considered to be limiting. Unless indicated differently, molecular biological standard methods were used, as e.g., described by Sambrock et al., 1989, Molecular Cloning: A Laboratory Manual, 2nd edition, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
EXAMPLE 1
Modified Endolysin Variants of Pseudomonas putida Phage OBP
[0091] OBPgpLYS having an amino acid sequence according to SEQ ID NO: 1 is a modular endolysin of 332 amino acid residues originating from Pseudomonas putida phage OBP with a putative N-terminal peptidoglycan binding domain and a C-terminal catalytic chitinase domain. OPBgpLYS having an amino acid sequence according to SEQ ID NO: 47 comprises in comparison to OBPgpLYS having an amino acid sequence according to SEQ ID NO: 1 an additional C-terminal His6-tag linked to the C-terminus by the additional amino acid residues lysin and glycin (Lys-Gly)
[0092] Purified genomic DNA of phage OBP was used as a template for the amplification of the open reading frame (ORF) of OBPgpLYS in standard PCR reaction with Pfu polymerase (Fermentas, Ontario, Canada) using the following PCR parameters:
##STR00001##
[0093] Therefore a standard 5' primer (5' ATGAAAAATAGCGAGAAGAAT 3' (SEQ ID NO: 44)) and a standard 3' primer (5' AACTATTCCGAGTGCTTTCTTTGT 3' (SEQ ID NO: 45)) was used. To extend the 5' end of the ORF which encodes OBPgpLYS with a gene fragment encoding the polycationic 9-mer peptide Lys-Arg-Lys-Lys-Arg-Lys-Lys-Arg-Lys- (SEQ ID NO: 20) a tail PCR (with same parameters as standard PCR above) with an extended 5' primer (5' ATGGGATCCAAACGCAAGAAACGTAAGAAACGCAAAAAAAATAGCGAG AAGAAT 3' (SEQ ID NO: 46)) and the standard 3' primer according to SEQ ID NO: 45 was applied. Both the original unmodified OBPgpLYS PCR fragment and the extended fragment were ligated in the pEXP5CT/TOPO® expression vector (Invitrogen, Carlsbad, Calif., USA) by following the TA-cloning protocol of the manufacturer.
[0094] Recombinant expression of OBPgpLYS having an amino acid sequence according to SEQ ID NO: 47 and PKOBPgpLYS having an amino acid sequence according to SEQ ID NO: 49 is performed in exponentially growing E. coli BL21 (λDE3) pLysS cells (Invitrogen) after induction with 1 mM IPTG (isopropylthiogalactoside) at 37° C. for a period of 4 hours. Both proteins were purified by Ni2+ affinity chromatography (Akta FPLC, GE Healthcare) using the C-terminal 6xHis-tag, encoded by the pEXP5CT/TOPO® expression vector. The Ni2+ affinity chromatography is performed in 4 subsequent steps, all on room temperature:
[0095] 1. Equilibration of the Histrap HP 1 ml column (GE Healthcare) with 10 column volumes of Washing Buffer (60 mM imidazole, 0.5 mM NaCl and 20 mM NaH2PO4--NaOH on pH 7.4) at a flow rate of 0.5 ml/min.
[0096] 2. Loading of the total lysate (with wanted endolysin) on the Histrap HP 1 ml column at a flow rate of 0.5 ml/min.
[0097] 3. Washing of the column with 15 column volumes of Washing Buffer at a flow rate of 1 ml/min.
[0098] 4. Elution of bounded endolysin from the column with 10 column volumes of Elution Buffer (500 mM imidazole, 0.5 M NaCl and 20 mM NaH2PO4--NaOH on pH 7.4) at a flow rate of 0.5 ml/min
[0099] The total yields of both purified recombinant proteins per liter E. coli expression culture is shown in Table 1. The values were determined by spectrophotometric measurement of the protein concentration and the total volume of the purified stock solution at a wavelength of 280 nm. Purified stock solutions consisting of OBPgpLYS and PKOBPgpLYS, respectively, in Elution Buffer (20 mM NaH2PO4--NaOH pH7.4; 0.5 M NaCl; 500 mM imidazole) were at least 90% pure as determined visually on SDS-PAGE gels.
TABLE-US-00005 TABLE 1 Yields of purified recombinant OBPgpLYS endolysin and its PK-modified PKOBPgpLYS per liter E. coli expression culture. Endolysins Expression yield OBPgpLYS (SEQ ID NO: 47) 3.3 mg PKOBPgpLYS (SEQ ID NO: 49) 4.7 mg
[0100] To determine the anti-Gram-negative spectrum of the endolysins OBPgpLYS according to SEQ ID NO: 47 and PKOBPgpLYS according to SEQ ID NO: 49, a combination of 1.313 μM of each endolysin and 0.5 mM EDTA was tested on the clinical multiresistant P. aeruginosa strain Br667, Pseudomonas putida G1 (host of phage OBP) and a range of other Gram-negative pathogens (P. aeruginosa PAO1p, P. aeruginosa Br667, P. putida G1, Burkholderia pseudomallei, Escherichia coli WK6 and Salmonella typhimurium) (see Table 3). Exponential growing bacterial cells (OD600 nm of 0.6) were 100-fold diluted to a final density of about 106 cells/ml of each strain was incubated for 30 minutes at room temperature without shaking with unmodified endolysin OBPgpLYS (SEQ ID NO: 47) and modified endolysin PKOBPgpLYS (SEQ ID NO: 49) each in combination without and with 0.5 mM EDTA. For incubation, the endolysins were used each in buffer (20 mM NaH2PO4--NaOH pH 7.4; 0.5 M NaCl; 0.5 M imidazole) and the incubation took place at a final concentration of endolysin of 1,313 μM. As a control each strain was also incubated for 30 minutes with 0.5 mM EDTA (in same buffer as outlined above) but no endolysin. After incubation cell suspensions were diluted three times (respectively 105-104-10.sup.3 cells/ml) and 100 μl of each dilution was plated out on LB-medium. The residual colonies were counted after an overnight incubation at 37° C. Based on the counted cell numbers the antibacterial activity as the relative inactivation in logarithmic units (=log10N0/Ni with N0=number of untreated cells and Ni=number of treated cells, both counted after incubation) was calculated (Table 2). All samples were replicated in threefold. Averages +/- standard deviations are represented. The maximal reduction observed is dependent on the detection level of 10 cells/ml and the initial cell density.
TABLE-US-00006 TABLE 2 Antibacterial activity of unmodified endolysin (OBPgpLYS) and its modified endolysin variant (PKOBPgpLYS) with and without EDTA-Na2 on different exponential growing Gram-negative species in logarithmic units. 1.313 μM 1.313 μM 0.5 mM 1.313 μM 1.313 μM OBPgpLYS + 0.5 mM PKOBPgpLYS + 0.5 mM EDTA OBPgpLYS PKOBPgpLYS EDTA EDTA P. aeruginosa 0.130 +/- 0.023 2.531 +/- 0.173 3.079 +/- 0.015 4.357 +/- 1.857 >5.687 PAO1p P. aeruginosa 0.031 +/- 0.023 1.082 +/- 0.083 1.163 +/- 0.063 3.144 +/- 0.223 5.272 +/- 0.573 Br667 P. putida G1 0.412 +/- 0.055 0.141 +/- 0.027 0.904 +/- 0.079 4.891 +/- 0.000 >4.891 Burkholderia 0.220 +/- 0.081 0.997 +/- 0.131 1.806 +/- 0.287 4.08 +/- 0.301 >4.861 pseudomallei Escherichia coli 0.592 +/- 0.113 0.681 +/- 0.032 1.434 +/- 0.018 1.179 +/- 0.200 1.695 +/- 0.147 WK6 Salmonella 0.054 +/- 0.048 0.076 +/- 0.011 0.127 +/- 0.013 0.774 +/- 0.052 0.908 +/- 0.037 typhimurium
[0101] While the global efficacy of the OBPgpLYS treatment is species dependent, the results in Table 2 show an added effect of the PKOBPgpLYS compared to unmodified OBPgpLYS for all bacterial species tested, both in the absence as the presence of 0.5 mM EDTA. For Pseudomonas and Burkholderia species, a clear synergistic effect with EDTA is observed for the PKOBPgpLYS activity.
TABLE-US-00007 TABLE 3 List of used Gram-negative strains Gram-negative strain Source Reference Pseudomonas aeruginosa PAO1p Burn wound isolate, Queen Astrid Hospital, Brussels Pirnay et al., 2003* Pseudomonas aeruginosa Br667 Burn wound isolate, Queen Astrid Hospital, Brussels Pirnay et al., 2003* Pseudomonas putida G1 Soil isolate, Moskow Prof V. Krylov** Burkholderia pseudomallei Clinical isolate, UZ Gasthuisberg, Leuven Prof J. Verhaegen*** Escherichia coli WK6 Standard laboratory expression strain Stratagene**** Salmonella typhimurium LT2 SGSC No 2317 Prof C. Michiels***** *Pirnay JP, De Vos D, Cochez C, Bilocq F, Pirson J, Struelens M, Duinslaeger L, Cornelis P, Zizi M, Vanderkelen A. (2003). Molecular epidemiology of Pseudomonas aeruginosa colonization in a burn unit: persistence of a multidrug-resistant clone and a silver sulfadiazine-resistant clone. J Clin Microbiol., 41(3): 1192-1202. **State Research Institute for Genetics and Selection of Industrial Microorganisms, Moscow 113545, 1st Dorozhnii projezd, 1, Russia ***Afd. Experiment. Laboratoriumgeneesk., UZ Herestraat 49 - bus 7003, 3000 Leuven, Belgium ****STANSSENS, P., OPSOMER, C., MCKEOWNY, M., KRAMER, W., ZABEAU, M. and FRITZ, H.-J. (1989). Efficient oligonucleotide-directed construction of mutations in expression vectors by the gapped duplex DNA method using alternating selectable markers. NucleiC Acids Research 17, 4441-4454. *****Centr. Levensmidd.- & Microb. Technol., Kasteelpark Arenberg 23 - bus 2457, 3001 Heverlee, Belgium
EXAMPLE 2
Effect of Different EDTA Concentrations on the Antibacterial Activity of OBPgpLYS and PKOBPgpLYS
[0102] To determine the influence of EDTA on the antibacterial activity of unmodified and modified endolysins the antibacterial activity of the unmodified OBPgpLYS endolysin (SEQ ID NO: 47) and the PKOBPgpLYS endolysin (SEQ ID NO: 49) was tested on Pseudomonas aeruginosa PAO1p cells (Pirnay J P et al. J Clin Microbiol., 41(3):1192-1202 (2003)) using different concentrations of EDTA and endolysins. Exponential growing bacterial cells (OD600 nm of 0.6) were 100-fold diluted to a final density of about 106 cells/ml and incubated for 30 minutes at room temperature without shaking with unmodified endolysin OBPgpLYS (SEQ ID NO: 47) and modified endolysin PKOBPgpLYS (SEQ ID NO: 49). For incubation, the endolysins were used each in buffer (20 mM NaH2PO4--NaOH pH 7.4; 0.5 M NaCl; 0.5 M imidazole) at final concentrations of endolysin of 0.013 μM, 0.131 μM and 1.315 μM. Thereby, the following different EDTA concentrations were used: 0 mM, 0.05 mM, 0.5 mM and 10 mM. As a control one sample was also incubated for 30 minutes with no endolysin, instead of there was buffer (20 mM NaH2PO4--NaOH pH 7.4; 0.5 M NaCl; 0.5 M imidazole) added. After incubation cell suspensions were diluted three times (respectively 105-104-10.sup.3 cells/ml) and 100 μl of each dilution was plated out on LB-medium. The residual colonies were counted after an overnight incubation at 37° C. Based on the counted cell numbers the antibacterial activity as the relative inactivation in logarithmic units (=log10N0/Ni with N0=number of untreated cells and Ni=number of treated cells, both counted after incubation) was calculated (Table 4). All samples were replicated in threefold. Averages +/- standard deviations are represented. The maximal reduction observed (5.69 log units) is dependent on the detection level of 10 cells/ml and the initial cell density. "Δ" gives the difference of activity between the respective OBPgpLYS and PKOBPgpLYS samples.
TABLE-US-00008 TABLE 4 Antibacterial activity of unmodified endolysin (OBPgpLYS) and its modified endolysin variant (PKOBPgpLYS) in combination with different EDTA-Na2 concentrations on exponential growing Pseudomonas aeruginosa PAO1p cells in logarithmic units Concentration of EDTA-Na2 (in mM) 0 0.05 0.5 10 No endolysin / 0.028 +/- 0.008 0.130 +/- 0.023 1.827 +/- 0.052 0.013 μM OBPgpLYS 0.956 +/- 0.110 / 4.626 +/- 0.287 / 0.013 μM 0.992 +/- 0.181 / 5.204 +/- 0.000 / PKOBPgpLYS Δ 0.036 0.578 0.131 μM OBPgpLYS 2.158 +/- 0.027 / 4.599 +/- 0.275 / 0.131 μM 2.529 +/- 0.184 / 5.671 +/- 0.000 / PKOBPgpLYS Δ 0.371 1.072 1.315 μM OBPgpLYS 2.531 +/- 0.173 2.762 +/- 0.091 4.357 +/- 1.857 4.888 +/- 0.275 1.315 μM 3.079 +/- 0.015 4.145 +/- 0.015 >5.687 >5.687 PKOBPgpLYS Δ 0.548 1.383 >1.330 >0.799
[0103] As shown in Table 4 unmodified endolysin OBPgpLYS reduces cell numbers significantly with more than 2.5 log units for 1.315 μM and with +/-1 log unit for 0.013 μM, compared to the negative control. Modified endolysin PKOBPgpLYS results in an added 0.5 log units reduction for exponentially growing PAO1p cells. The observed antibacterial effect can be increased to more as 5.69 log units reduction (beneath the detection level) by combining PKOBPgpLYS with the outer membrane permeabilizer EDTA-Na2 at a concentration of 0.5 and 10 mM EDTA. The difference in activity between the unmodified OBPgpLYS and the PK-modified OBPgpLYS increases by raising the amount of added endolysin (from 0.013-1.315 μM endolysin).
EXAMPLE 3
Cloning, Expression and Purification of an OBPgpLYS Derivative Modified with Various Peptide Stretches on the N-terminus of the Endolysin
[0104] The OBPgpLYS derivative according to SEQ ID NO:86 is a modular endolysin originating from Pseudomonas putida phage OBP with an N-terminal peptidoglycan binding and C-terminal catalytic domain. The OBPgpLYS derivative is encoded by the nucleic acid molecule according to SEQ ID NO: 101. Purified Plasmid DNA (see Example 1) was used to produce a nucleic acid molecule according to SEQ ID NO: 101 with a BamH I (5'-GGA TCC-3') restriction site at the 5'-end of the nucleic acid molecule and an Xho I (5'-CTC GAG-3') restriction site at the 3'-end of the nucleic acid molecule.
[0105] The following peptide stretches in table 5 were used for production of fusion proteins with the endolysin OBPgpLYS derivative. The resulting fusion proteins are also listed in table 5.
TABLE-US-00009 TABLE 5 Peptide stretches and their respective nucleic acid sequence for production of specific fusion proteins Nucleic acid molecule Amino acid encoding the peptide sequence of Peptide stretch stretch resulting fusion protein Ascaphine SEQ ID NO: 90 SEQ ID NO: 55 (SEQ ID NO: 50) Apidaecine SEQ ID NO: 91 SEQ ID NO: 57 (SEQ ID NO: 51) Sarcotoxin IA SEQ ID NO: 92 SEQ ID NO: 63 (SEQ ID NO: 17) SMAP-29 SEQ ID NO: 93 SEQ ID NO: 65 (SEQ ID NO: 12) Cecropin A (A. aegypti) SEQ ID NO: 94 SEQ ID NO: 67 (SEQ ID NO: 15)
[0106] The nucleic acid molecules encoding the respective peptide stretches were synthetically produced with a Nde I (5'-CAT ATG-3') restriction site at the 5'-end of the nucleic acid molecule and a BamH I (5'-GGA TCC-3') restriction site at the 3'-end of the nucleic acid molecule.
[0107] Fusion proteins are constructed by linking at least two nucleic acid sequences using standard cloning techniques as described e.g. by Sambrook et al. 2001, Molecular Cloning: A Laboratory Manual. Therefore the nucleic acid molecules encoding the peptide stretches were cleaved in a digest with the respective restriction enzymes Nde I and BamH I. Subsequently the cleaved nucleic acids encoding the peptide stretches were ligated into the pET21 b expression vector (Novagen, Darmstadt, Germany), which was also cleaved in a digest with the respective restriction enzymes Nde I and BamH I before.
[0108] Afterwards, the nucleic acid molecule encoding the endolysin OBPgpLYS derivative was cleaved in a digest with the restriction enzyme BamH I and Xho I, so that the endolysin could be ligated into the pET21b expression vector (Novagen, Darmstadt, Germany).
[0109] Thus, the nucleic acid molecule encoding the peptide stretch is ligated into the respective vector at the 5'-end of the nucleic acid molecule encoding the endolysin OBPgpLYS derivative. Moreover, the nucleic acid molecule encoding the endolysin OBPgpLYS derivative is ligated into the respective plasmid, so that a nucleic acid molecule encoding a His6-tag consisting of six histidine residues is associated at the 3'-end of the nucleic acid molecule encoding the endolysin.
[0110] The sequence of the endolysin-peptide-fusions was controlled via DNA-sequencing and correct clones were transformed into E. coli T7 Express lysY/Iq (New England Biolabs, Frankfurt, Germany) for protein expression.
[0111] Recombinant expression of the fusion proteins according to SEQ ID NO: 55, 57, 63, 65, 67 is performed in E. coli T7 Express lysY/Iq (New England Biolabs, Frankfurt, Germany). The cells were growing until an optical density of OD600 nm of 0.5-0.8 was reached. Then the expression of the fusion protein was induced with 0.5 mM IPTG (isopropylthiogalactoside) and the expression was performed at 37° C. for a period of 4 hours.
[0112] Cells were harvested by centrifugation for 15 min at 4000 g and disrupted via sonication on ice. Soluble and insoluble fraction of the E. coli crude extract were separated by centrifugation (Sorvall, SS34, 30 min, 15000 rpm). All proteins were purified by Ni2+ affinity chromatography (Akta FPLC, GE Healthcare) using the C-terminal 6xHis-tag, encoded by the pET21b vector.
[0113] The Ni2+ affinity chromatography is performed in 4 subsequent steps, all at room temperature:
[0114] 1. Equilibration of the Histrap FF 5 ml column (GE Healthcare) with up to 10 column volumes of Washing Buffer (20 mM imidazole, 1 M NaCl and 20 mM Hepes on pH 7.4) at a flow rate of 3-5 ml/min.
[0115] 2. Loading of the total lysate (with wanted fusion protein) on the Histrap FF 5 ml column at a flow rate of 3-5 ml/min.
[0116] 3. Washing of the column with up to 10 column volumes of Washing Buffer to remove unbound sample followed by a second washing step with 10% Elution buffer (500 mM imidazole, 0.5 M NaCl and 20 mM Hepes on pH 7.4) at a flow rate of 3-5 ml/min.
[0117] 4. Elution of bounded fusion proteins from the column with a linear gradient of 4 column volumes of Elution Buffer (500 mM imidazole, 0.5 M NaCl and 20 mM Hepes on pH 7.4) to 100% at a flow rate of 3-5 ml/min.
[0118] Purified stock solutions of fusion proteins in Elution Buffer (20 mM Hepes pH 7.4; 0.5 M NaCl; 500 mM imidazole) were at least 60% pure as determined visually on SDS-PAGE gels (data not shown).
EXAMPLE 4
Antimicrobial Activity of the Endolysin OBPgpLYS Derivative Modified with Various Peptide Stretches on the N-terminus
[0119] Acinetobacter baumannii DSMZ 30007 and Pseudomonas aeruginosa PAO1p cells (Burn wound isolate, Queen Astrid Hospital, Brussels; Pirnay J P et al. (2003), world-wide-web at ncbi.nlm.nih.gov/pubmed/12624051?ordinalpos=3&itool=EntrezSystem2.PEntrez- .Pubmed.Pubm ed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSumJ Clin Microbiol., 41(3):1192-1202) were used as test strains. Overnight cultures were diluted 10-fold in fresh LB medium and grown to OD600=0.6. The culture was spun down and diluted 10-fold in dilution buffer (10 mM HEPES, 0.5 mM EDTA; pH 7.4). Bacteria were incubated at room temperature with each 10 μg undialyzed fusion protein at a final concentration of 100 μg/ml in buffer (20 mM NaH2PO4--NaOH pH 7.4; 0.5 M NaCl; 0.5 M imidazole). After 1 hour cell dilution series were made in PBS and plated on LB. Additionally, a negative control was plated using buffer (20 mM NaH2PO4--NaOH pH 7.4; 0.5 M NaCl; 0.5 M imidazole). The residual colonies were counted after an overnight incubation at 37° C. Based on the counted cell numbers the antibacterial activity as logarithmic units (=log10N0/Ni with N0=number of untreated cells and Ni=number of treated cells) was calculated (Table 5). All samples were replicated at least in four fold.
TABLE-US-00010 TABLE 6 Antimicrobial activity of the OBPgpLYS derivative modified with various peptide stretches against gram-negative bacteria Activity Activity Peptide stretch against against (N-terminal unless Acinetobacter Pseudomonas otherwise baumannii aeruginosa Fusion protein Enzyme part indicated) DSMZ 30007 PAO1p cells SEQ ID NO: 88 SEQ ID NO: 87 -- ++ + SEQ ID NO: 55 SEQ ID NO: 87 Ascaphine +++ Not (SEQ ID NO: 50) determined SEQ ID NO: 57 SEQ ID NO: 87 Apidaecine +++ Not (SEQ ID NO: 51) determined SEQ ID NO: 63 SEQ ID NO: 87) Sarcotoxin IA +++ ++ (SEQ ID NO: 17) SEQ ID NO: 65 SEQ ID NO: 87 SMAP-29 +++ ++ (SEQ ID NO: 12) SEQ ID NO: 67 SEQ ID NO: 87 Cecropin A +++ +++ (SEQ ID NO: 15) Abreviations: +: 1 log; ++: 2-3 log; +++: 4 or more logs; not determined means that this strain was not tested with the respective fusion protein.
[0120] The fusion proteins in Table 6 without any tag and linker were also tested with the activity assays described above. They all showed antimicrobial activity against the used bacterial strains in Table 6.
EXAMPLE 5
N-Terminal Antibacterial Peptide Fusion to Endolysin of Pseudomonas putida Phage OBP
[0121] OBPgpLys derivative, the modular endolysin of P. putida phage OBP, was N-terminally fused to a set of natural antibacterial peptide tags (Table 7) in order to investigate its anti Gram-negative activity.
TABLE-US-00011 TABLE 7 List of antibacterial peptide tags which were fused to the OBPgpLYS derivative Amino Nucleic Description + acid acid Tag size sequence sequence Reference α4-helix of Amphipathic PNRAKRVITTFRT SEQ ID NO: 95 Matthews et T4-lysozyme helix (SEQ ID NO: 68) al., 1974* (13 aa) Pentapeptide Hydrophobic FFVAP SEQ ID NO: 96 Briers Y (not (designed) (5 aa) (SEQ ID NO: 18) published Artilysin1 Hydrophobic GFFIPAVILPSIAFL SEQ ID NO: 97 Walmagh, M. (designed) (18 aa) IVP (Not (SEQ ID NO: 70) published) Artilysin2 Amphipathic GKPGWLIKKALVFKK SEQ ID NO: 98 Walmagh, M (designed) helix LIRRPLKRLA (Not (25 aa) (SEQ ID NO: 71) published) Parasin 1 Alpha-helical KGRGKQGGKVRAKAK SEQ ID NO: 99 Park, Y et peptide TRSS al., 1998** (19 aa) (SEQ ID NO: 72) Lycotoxin 1 Amphiphatic IWLTALKFLGKHAAK SEQ ID NO: 100 Yan & Adams, helix KLAKQQLSKL 1988*** (25 aa) (SEQ ID NO: 73) *Matthews, B.W. and Remington, S.J. (1974). The three dimensional structure of the lysozyme from bacteriophage T4. Proc. Natl. Acad. Sci. USA, 71: 4178-4182 **In Yup Park, Chan Bae Park, Mi Sun Kim, Sun Chang Kim (1998). Parasin I, an antimicrobial peptide derived from histone H2A in the cat sh, Parasilurus asotus. FEBS Letters 437 258-262 ***Yan, L and Adams, M.A. (1998). Lycotoxins, Antimicrobial Peptides from Venom of the Wolf Spider, Lycosa carolinensis J. Biol. Chem, 273: 2059-2066.
Methodology of Tag Modification of the OBPgpLys Derivative
[0122] Except for the pentapeptide tag, all antibacterial peptide tags were fused to the ORF which encodes for the OBPgpLYS derivative using an adapted version of the Ligation Independent Cloning (LIC) as e.g. described in Berrow et al. 2007. Here fore, an unique Ecl136II restriction site was inserted in front of the WT endolysin gene by a tail PCR with a specific designed 5' primer (5'-GGAATGGGGAGCTCCTCCAAAAATAGCGAGAAG-3'; SEQ ID NO:102) and the standard OBPgpLys derivative reverse primer (5'-AACTATTCCGTGTGCTTTCTTTGT -3'; SEQ ID NO:103) on pure genomic DNA of phage OBP. This extended fragment was then ligated in the pEXP5CT/TOPO® expression vector (Invitrogen, Carlsbad, Calif., USA) by following the TA cloning protocol of the manufacturer. Pure plasmid was cutted once in an Ecl136II restriction digest and hybridized peptide cassettes (created by hybridization of primer pairs, see Table 8) were inserted into the cutted plasmid without a necessary ligation step (LIC). For the N-terminal pentapeptide tag fusion a tail PCR with an extended 5' primer which encodes for this pentapeptide (5' -ATGGGATCCTTCTTCGTAGCA CCGGGCTCCTCCAAAAATAGCGAGAAG-3'; SEQ ID NO:104) and the standard OBPgpLys derivative reverse primer (5'-AACTATTCCGTGTGCTTTCTTTGT-3'; SEQ ID NO:103) was applied on phage OBP genomic DNA. Correct insertion of the fragments in the expression vector was verified by sequencing analysis before introducing the construct into a suitable Escherichia coli BL21(DE3)pLysS expression strain.
TABLE-US-00012 TABLE 8 Used primer pairs for hybridization of antibacterial peptide tags to ORF encoding the OBPgpLys derivative forward reverse Tag primer primer α4-helix 5' TTGGAATGGGG 5' TATTTTTGGAG of T4- AGCCCGAACCGTGC GAGCCGGTACGGAA lysozyme AAAACGTGTAATC GGTGGTGATTACAC A 3'; GTT 3'; SEQ ID NO: 105 SEQ ID NO: 106 Artilysin1 5' TTATGGGCTTC 5' TATTTTTGGAT (designed) TTCATCCCGGCAGT CTGCCGCCCGGTAC AATCCTGCCCTCC GATCAGGAATGCGA A 3'; TGGAGGGCAGGAT SEQ ID NO: 107 T 3'; SEQ ID NO: 108 Artilysin2 5' TTATGGGCAAA 5' TATTTTTGGAT (designed) CCGGGCTGGCTGAT CTGCCGCCTGCCAG CAAAAGGCACTGGT TCTCTTCAGCGGAC ATTCAAGA 3'; GACGGATCAGTTTC SEQ ID NO: 109 TTGAATACCAG 3'; SEQ ID NO: 110 Parasin 1 5' TTGGAATGGGG 5' TATTTTTGGAG AGCAAAGGCCGTGG GAGCCTGAGGAACG CAAGCAGGGAGGCA GGTCTTTGCTTTTG AAGTACGTG 3'; CACGTACTTTG SEQ ID NO: 111 C 3'; SEQ ID NO: 112 Lycotoxin 1 5' GGAATGGGGAG 5' TATTTTTGGAG CATCTGGCTGACCG GAGCCCAGTTTGGA CACTGAAATTCCTC TAATTGCTGTTTTG GGCAAACACGCCGC CCAGTTTCTTTGCG AA 3'; GCGTGTT 3'; SEQ ID NO: 113 SEQ ID NO: 114
Large Scale Recombinant Expression of Modified OBPgpLYS Derivative Fusion Variants
[0123] Standard expression is performed in Lysogeny Broth (LB) in exponentially growing cells (OD600 nm=0.6) induced with 1 mM isopropyl-beta-D-thiogalactopyranoside. Expression parameters like temperature, time and expression strain varied on a protein specific basis in order to optimize the soluble expression levels of the modified endolysins (see Table 9).
[0124] For purification, cells from an expression culture (500-600 ml) are harvested (4500 rpm, 30 min, 4° C.) and resuspended in 1/25 volumes of lysis buffer (10 mM imidazole, 20 mM NaH2PO4, 0.5 M NaCl, pH 7.4). This suspension is frozen/thawed three times prior to sonication (8×30 s, amplitude 40% on a Vibra Cell®, Sonics, Dandurry, Conn., USA) and filtered through 0.45 and 0.22 μm Durapore membrane filters (Millipore, Billerica, Mass., USA). Purification of the His-tagged fusion protein was performed by a one-step protocol employing Ni2+-affinity chromatography (HisTrap HP 1 ml column, GE Healthcare, Buckinghamshire, UK) according to the manufacturer's instructions. The Ni2+ affinity chromatography is performed in 4 subsequent steps, all on room temperature:
[0125] 1. Equilibration of the Histrap HP 1 ml column (GE Healthcare) with 10 column volumes of Washing Buffer (60 mM imidazole, 0.5 mM NaCl and 20 mM NaH2PO4--NaOH on pH 7.4) at a flow rate of 0.5 ml/min.
[0126] 2. Loading of the total lysate (with wanted endolysin) on the Histrap HP 1 ml column at a flow rate of 0.5 ml/min.
[0127] 3. Washing of the column with 15 column volumes of Washing Buffer at a flow rate of 1 ml/min.
[0128] 4. Elution of bounded endolysin from the column with 10 column volumes of Elution Buffer (500 mM imidazole, 0.5 M NaCl and 20 mM NaH2PO4--NaOH on pH 7.4) at a flow rate of 0.5 ml/min
[0129] The wash buffer included a low imidazole concentration which varied on protein specific base to ensure higher purity of the protein (see Table 9). The total yields of recombinant proteins per liter E. coli expression culture is also shown in Table 3. The values were determined by spectrophotometric measurement of the protein concentration and the total volume of the purified stock solution at a wavelength of 280 nm. Purified stock solutions were at least 60% pure as determined visually on SDS-PAGE gels.
TABLE-US-00013 TABLE 9 Expression parameters and obtained protein yields per liter expression culture of N-terminal modified endolysins. RP = E. coli BL21(DE3)pLysS Codon min RP strain, RIL = E. coli BL21(DE3)pLysS Codon Plus RIL strain Temperature/ Protein Yield [imidazole] Modified endolysin time (in mg/l) (in mM) α4-OBPgpLys 16/overnight 1.28 60 (SEQ ID NO: 75) Pentapeptide- 16/overnight 1.10 65 OBPgpLys (SEQ ID NO: 77) Artilysin1-OBPgpLys 16/overnight <0.1 50 (SEQ ID NO: 79) Artilysin2-OBPgpLys 16/overnight 1.32 50 (SEQ ID NO: 81) Parasin1-OBPgpLys 16/overnight 0.38 50 (SEQ ID NO: 83) Lycotoxin1- 16/overnight 1.71 50 OBPgpLys (SEQ ID NO: 85)
In Vitro Antibacterial Activity and Host Range of Modified OBPgpLys Derivative Variants
[0130] Exponential growing Gram-negative bacterial cells (OD600 nm=0.6) were 100-fold diluted to a final density of about 106 cells/ml and incubated for 30 minutes at room temperature without shaking with the different modified OBPgpLYS derivative variants. After incubation cell suspensions were diluted three times (respectively 105-104-103 cells/ml) and 100 μl of each dilution was plated out on LB-medium. The residual colonies were counted after an overnight incubation on 37° C. Based on the counted cell numbers the antibacterial activity as the relative inactivation in logarithmic units (=log10N0/Ni with N0=number of untreated cells and Ni=number of treated cells, both counted after incubation) is calculated (Table 10). All samples were replicated in threefold. Averages +/- standard deviations are represented.
TABLE-US-00014 TABLE 10 In vitro antibacterial activity of different modified OBPgpLYS derivative variants on a range of exponential growing Gram-negative species with 0.5 mM EDTA. Initial density is 106 cells/ml and incubation proceeds for 30 minutes without shaking at RT. Protein concentration is 1500 nM, except for Artilys1-OBPgplys (800 nM). Salmonella P. aeruginosa P. putida E. coli typhimurium PAO1p G1 X1-1 LT2 1500 nM ++ ++ ++ + α4-OBPgpLys (SEQ ID NO: 75) 1500 nM ++ +++ ++ + Pentapeptide- OBPgpLys (SEQ ID NO: 77) 800 nM Artilysin1- Not determined ++ + + OBPgpLys (SEQ ID NO: 79) 1500 nM Artilysin2- ++ ++ ++ + OBPgpLys (SEQ ID NO: 81) 1500 nM +++ +++ +++ ++ Parasin1-OBPgpLys (SEQ ID NO: 83) 1500 nM ++ +++ ++ + Lycotoxin1- OBPgpLys (SEQ ID NO: 85) 1500 nM + + + + OBPgpLYS (SEQ ID NO: 88) Abreviations: +: about 0.5 log; ++: 1-2 log; +++: 3-4 or more logs; not determined means that this strain was not tested with the respective fusion protein.
Sequence CWU
1
1
1191328PRTunknownOBPgpLYS 1Met Lys Asn Ser Glu Lys Asn Ala Ser Ile Ile Met
Ser Ile Gln Arg 1 5 10
15 Thr Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe
20 25 30 Gly Glu Lys
Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr 35
40 45 Pro Asn Phe Ser Thr Asn Lys Leu
Pro Ser Asn Thr Tyr Glu Ala Glu 50 55
60 Ser Val Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val
Gly Leu Tyr 65 70 75
80 Thr Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile
85 90 95 Asp Ala Leu Val
Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala 100
105 110 Gly Ser Thr Leu Pro Leu Gly Leu Ala
Thr Val Met Ser Lys His Met 115 120
125 Ser Ile Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg Gln
Gly Tyr 130 135 140
Ala Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu 145
150 155 160 Ile Asn Thr Pro Leu
Arg Ile Ala His Phe Met Ala Gln Ile Leu His 165
170 175 Glu Thr Ala Cys Phe Lys Tyr Thr Glu Glu
Leu Ala Ser Gly Lys Ala 180 185
190 Tyr Glu Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly
Pro 195 200 205 Leu
Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr 210
215 220 Val Lys Cys Gln Val Tyr
Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe 225 230
235 240 Asp Ile Thr Ser Ser Val Thr Cys Ala Gln Gln
Leu Ser Glu Ser Pro 245 250
255 Leu Leu Ala Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro
260 265 270 Lys Leu
Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val 275
280 285 Tyr Val Asn Gly Tyr Ala Lys
Gln Ala Asn Pro Tyr Tyr Pro Asn Arg 290 295
300 Asp Lys Glu Pro Asn His Met Lys Glu Arg Val Gln
Met Leu Ala Val 305 310 315
320 Thr Lys Lys Ala Leu Gly Ile Val 325
2987DNABacteriophage OBP 2atgaaaaata gcgagaagaa tgcatcgata attatgtcga
tacagagaac gctcgcttca 60ctctcactct atggaggccg catcgacggc ctctttggag
agaagtgtcg tggggctatc 120atcttgatgc tgaataaggt ctatcctaat ttcagcacca
acaaacttcc gagtaacaca 180tatgaagcgg aatccgtgtt cacgtttctc cagactgctt
tggctggtgt tggtctttat 240accattacta ttgatggtaa atggggtggt acttctcaag
gtgctattga cgccctcgtc 300aagtcttacc gtcaaattac cgaagcggag cgagctgggt
cgacgttgcc attaggtctt 360gctactgtga tgtctaagca tatgtctatt gaacagttga
gagcaatgct ccctaccgat 420agacaaggat atgctgaagt ttatatcgat cctttaaatg
agacgatgga tatatttgaa 480ataaatactc cattacgaat tgctcatttc atggcccaaa
tcctccacga aacggcgtgt 540tttaaatata ccgaagaact ggcgagcggt aaggcttatg
agggtcgtgc tgatttaggt 600aatactcgac caggtgatgg accactgttt aaaggtcgtg
gattattaca aattaccggg 660cgactgaatt atgtgaaatg ccaagtgtat ttgagagaga
agttaaagga ccctactttc 720gacattacgt cgtctgtaac ttgtgcccaa cagctctccg
aaagtccact tcttgctgca 780ttggcatcgg gctacttctg gagattcatc aaacctaaac
tcaatgaaac ggctgataaa 840gacgatatct attgggtttc tgtttatgtc aatggttacg
ctaaacaagc gaatccttat 900taccctaacc gggataagga acccaaccat atgaaagaac
gtgtccaaat gcttgcagtg 960acaaagaaag cactcggaat agtttaa
9873984DNAunknownOBPgpLYS 3atgaaaaata gcgagaagaa
tgcatcgata attatgtcga tacagagaac gctcgcttca 60ctctcactct atggaggccg
catcgacggc ctctttggag agaagtgtcg tggggctatc 120atcttgatgc tgaataaggt
ctatcctaat ttcagcacca acaaacttcc gagtaacaca 180tatgaagcgg aatccgtgtt
cacgtttctc cagactgctt tggctggtgt tggtctttat 240accattacta ttgatggtaa
atggggtggt acttctcaag gtgctattga cgccctcgtc 300aagtcttacc gtcaaattac
cgaagcggag cgagctgggt cgacgttgcc attaggtctt 360gctactgtga tgtctaagca
tatgtctatt gaacagttga gagcaatgct ccctaccgat 420agacaaggat atgctgaagt
ttatatcgat cctttaaatg agacgatgga tatatttgaa 480ataaatactc cattacgaat
tgctcatttc atggcccaaa tcctccacga aacggcgtgt 540tttaaatata ccgaagaact
ggcgagcggt aaggcttatg agggtcgtgc tgatttaggt 600aatactcgac caggtgatgg
accactgttt aaaggtcgtg gattattaca aattaccggg 660cgactgaatt atgtgaaatg
ccaagtgtat ttgagagaga agttaaagga ccctactttc 720gacattacgt cgtctgtaac
ttgtgcccaa cagctctccg aaagtccact tcttgctgca 780ttggcatcgg gctacttctg
gagattcatc aaacctaaac tcaatgaaac ggctgataaa 840gacgatatct attgggtttc
tgtttatgtc aatggttacg ctaaacaagc gaatccttat 900taccctaacc gggataagga
acccaaccat atgaaagaac gtgtccaaat gcttgcagtg 960acaaagaaag cactcggaat
agtt 984490PRTunknownPGB of
OBPgpLYS 4Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser
1 5 10 15 Leu Tyr
Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly 20
25 30 Ala Ile Ile Leu Met Leu Asn
Lys Val Tyr Pro Asn Phe Ser Thr Asn 35 40
45 Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
Phe Thr Phe Leu 50 55 60
Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly 65
70 75 80 Lys Trp Gly
Gly Thr Ser Gln Gly Ala Ile 85 90
5167PRTunknownEAD of OBPgpLYS 5Lys His Met Ser Ile Glu Gln Leu Arg Ala
Met Leu Pro Thr Asp Arg 1 5 10
15 Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met
Asp 20 25 30 Ile
Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln 35
40 45 Ile Leu His Glu Thr Ala
Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser 50 55
60 Gly Lys Ala Tyr Glu Gly Arg Ala Asp Leu Gly
Asn Thr Arg Pro Gly 65 70 75
80 Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg
85 90 95 Leu Asn
Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp 100
105 110 Pro Thr Phe Asp Ile Thr Ser
Ser Val Thr Cys Ala Gln Gln Leu Ser 115 120
125 Glu Ser Pro Leu Leu Ala Ala Leu Ala Ser Gly Tyr
Phe Trp Arg Phe 130 135 140
Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp 145
150 155 160 Val Ser Val
Tyr Val Asn Gly 165 625PRTunknownamphiphatic
peptide Pleurocidin 6Gly Trp Gly Ser Phe Phe Lys Lys Ala Ala His Val Gly
Lys His Val 1 5 10 15
Gly Lys Ala Ala Leu Thr His Tyr Leu 20 25
731PRTunknownamphiphatic peptide Cecropin P1 7Ser Trp Leu Ser Lys Thr Ala
Lys Lys Leu Glu Asn Ser Ala Lys Lys 1 5
10 15 Arg Ile Ser Glu Gly Ile Ala Ile Ala Ile Gln
Gly Gly Pro Arg 20 25 30
821PRTunknownamphiphatic peptide Buforin II 8Thr Arg Ser Ser Arg Ala
Gly Leu Gln Phe Pro Val Gly Arg Val His 1 5
10 15 Arg Leu Leu Arg Lys 20
939PRTunknownamphiphatic peptide Buforin I 9Ala Gly Arg Gly Lys Gln Gly
Gly Lys Val Arg Ala Lys Ala Lys Thr 1 5
10 15 Arg Ser Ser Arg Ala Gly Leu Gln Phe Pro Val
Gly Arg Val His Arg 20 25
30 Leu Leu Arg Lys Gly Asn Tyr 35
1023PRTunknownamphiphatic peptide Magainin 10Gly Ile Gly Lys Phe Leu His
Ser Ala Lys Lys Phe Gly Lys Ala Phe 1 5
10 15 Val Gly Glu Ile Met Asn Ser 20
1137PRTunknownamphiphatic peptide LL-37 11Leu Leu Gly Asp Phe
Phe Arg Lys Ser Lys Glu Lys Ile Gly Lys Glu 1 5
10 15 Phe Lys Arg Ile Val Gln Arg Ile Lys Asp
Phe Leu Arg Asn Leu Val 20 25
30 Pro Arg Thr Glu Ser 35 1229PRTunknownantimicrobial
peptide SMAP-29 12Arg Gly Leu Arg Arg Leu Gly Arg Lys Ile Ala His Gly Val
Lys Lys 1 5 10 15
Tyr Gly Pro Thr Val Leu Arg Ile Ile Arg Ile Ala Gly 20
25 1313PRTunknownantimicrobial peptide
Indolicidin 13Ile Leu Pro Trp Lys Trp Pro Trp Trp Pro Trp Arg Arg 1
5 10 1418PRTunknownantimicrobial
peptide Protegrin 14Arg Gly Gly Arg Leu Cys Tyr Cys Arg Arg Arg Phe Cys
Val Cys Val 1 5 10 15
Gly Arg 1536PRTunknownantimicrobial peptide Cecropin A (A.aegypti)
15Gly Gly Leu Lys Lys Leu Gly Lys Lys Leu Glu Gly Ala Gly Lys Arg 1
5 10 15 Val Phe Asn Ala
Ala Glu Lys Ala Leu Pro Val Val Ala Gly Ala Lys 20
25 30 Ala Leu Arg Lys 35
1640PRTunknownantimicrobial peptide Cecropin A (D. melanogaster)
16Gly Trp Leu Lys Lys Ile Gly Lys Lys Ile Glu Arg Val Gly Gln His 1
5 10 15 Thr Arg Asp Ala
Thr Ile Gln Gly Leu Gly Ile Pro Gln Gln Ala Ala 20
25 30 Asn Val Ala Ala Thr Ala Arg Gly 35
40 1739PRTunknownantimicrobial peptide Sarcotoxin IA
17Gly Trp Leu Lys Lys Ile Gly Lys Lys Ile Glu Arg Val Gly Gln His 1
5 10 15 Thr Arg Asp Ala
Thr Ile Gln Gly Leu Gly Ile Ala Gln Gln Ala Ala 20
25 30 Asn Val Ala Ala Thr Ala Arg
35 185PRTunknownsynthetic peptide 18Phe Phe Val Ala Pro
1 5 196PRTunknownsynthetic peptide 19Lys Arg Lys Lys Arg
Lys 1 5 209PRTunknownsynthetic peptide 20Lys Arg Lys
Lys Arg Lys Lys Arg Lys 1 5
219PRTunknownsynthetic peptide 21Arg Arg Arg Arg Arg Arg Arg Arg Arg 1
5 228PRTunknownsynthetic peptide 22Lys Lys
Lys Lys Lys Lys Lys Lys 1 5
2310PRTunknownsynthetic peptide 23Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys
1 5 10 2412PRTunknownsynthetic peptide
24Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys 1 5
10 2514PRTunknownsynthetic peptide 25Lys Arg Lys Lys
Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg 1 5
10 2616PRTunknownsynthetic peptide 26Lys Lys Lys Lys
Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys 1 5
10 15 2719PRTunknownsynthetic peptide
27Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys 1
5 10 15 Arg Lys Lys
2819PRTunknownsynthetic peptide 28Arg Arg Arg Arg Arg Arg Arg Arg Arg Arg
Arg Arg Arg Arg Arg Arg 1 5 10
15 Arg Arg Arg 2919PRTunknownsynthetic peptide 29Lys Lys Lys
Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys Lys 1 5
10 15 Lys Lys Lys
3020PRTunknownsynthetic peptide 30Lys Arg Lys Lys Arg Lys Lys Arg Lys Arg
Ser Lys Arg Lys Lys Arg 1 5 10
15 Lys Lys Arg Lys 20 3121PRTunknownsynthetic
peptide 31Lys Arg Lys Lys Arg Lys Lys Arg Lys Arg Ser Lys Arg Lys Lys Arg
1 5 10 15 Lys Lys
Arg Lys Lys 20 3221PRTunknownsynthetic peptide 32Lys Arg
Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys 1 5
10 15 Arg Lys Lys Arg Lys
20 3322PRTunknownsynthetic peptide 33Lys Arg Lys Lys Arg Lys Lys
Arg Lys Arg Gly Ser Gly Lys Arg Lys 1 5
10 15 Lys Arg Lys Lys Arg Lys 20
3424PRTunknownsynthetic peptide 34Lys Arg Lys Lys Arg Lys Lys Arg Lys
Arg Gly Ser Gly Ser Gly Lys 1 5 10
15 Arg Lys Lys Arg Lys Lys Arg Lys 20
3525PRTunknownsynthetic peptide 35Lys Arg Lys Lys Arg Lys Lys Arg
Lys Lys Arg Lys Lys Arg Lys Lys 1 5 10
15 Arg Lys Lys Arg Lys Lys Arg Lys Lys 20
25 3631PRTunknownsynthetic peptide 36Lys Arg Lys Lys Arg
Lys Lys Arg Lys Arg Ser Lys Arg Lys Lys Arg 1 5
10 15 Lys Lys Arg Lys Arg Ser Lys Arg Lys Lys
Arg Lys Lys Arg Lys 20 25
30 3738PRTunknownsynthetic peptide 37Lys Arg Lys Lys Arg Lys Lys Arg
Lys Arg Gly Ser Gly Ser Gly Lys 1 5 10
15 Arg Lys Lys Arg Lys Lys Arg Lys Gly Ser Gly Ser Gly
Lys Arg Lys 20 25 30
Lys Arg Lys Lys Arg Lys 35 3839PRTunknownsynthetic
peptide 38Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys
1 5 10 15 Arg Lys
Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys Arg 20
25 30 Lys Lys Arg Lys Lys Arg Lys
35 3942PRTunknownsynthetic peptide 39Lys Arg Lys
Lys Arg Lys Lys Arg Lys Arg Ser Lys Arg Lys Lys Arg 1 5
10 15 Lys Lys Arg Lys Arg Ser Lys Arg
Lys Lys Arg Lys Lys Arg Lys Arg 20 25
30 Ser Lys Arg Lys Lys Arg Lys Lys Arg Lys 35
40 405PRTunknownsynthetic peptide 40Lys Arg Xaa
Lys Arg 1 5 415PRTunknownsynthetic peptide 41Lys Arg Ser
Lys Arg 1 5 425PRTunknownsynthetic peptide 42Lys Arg Gly
Ser Gly 1 5 43339PRTunknownPKOBPgpLYS 43Met Gly Ser Lys
Arg Lys Lys Arg Lys Lys Arg Lys Lys Asn Ser Glu 1 5
10 15 Lys Asn Ala Ser Ile Ile Met Ser Ile
Gln Arg Thr Leu Ala Ser Leu 20 25
30 Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys
Cys Arg 35 40 45
Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr 50
55 60 Asn Lys Leu Pro Ser
Asn Thr Tyr Glu Ala Glu Ser Val Phe Thr Phe 65 70
75 80 Leu Gln Thr Ala Leu Ala Gly Val Gly Leu
Tyr Thr Ile Thr Ile Asp 85 90
95 Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val
Lys 100 105 110 Ser
Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro 115
120 125 Leu Gly Leu Ala Thr Val
Met Ser Lys His Met Ser Ile Glu Gln Leu 130 135
140 Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr
Ala Glu Val Tyr Ile 145 150 155
160 Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu
165 170 175 Arg Ile
Ala His Phe Met Ala Gln Ile Leu His Glu Thr Ala Cys Phe 180
185 190 Lys Tyr Thr Glu Glu Leu Ala
Ser Gly Lys Ala Tyr Glu Gly Arg Ala 195 200
205 Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu
Phe Lys Gly Arg 210 215 220
Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val 225
230 235 240 Tyr Leu Arg
Glu Lys Leu Lys Asp Pro Thr Phe Asp Ile Thr Ser Ser 245
250 255 Val Thr Cys Ala Gln Gln Leu Ser
Glu Ser Pro Leu Leu Ala Ala Leu 260 265
270 Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu
Asn Glu Thr 275 280 285
Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr 290
295 300 Ala Lys Gln Ala
Asn Pro Tyr Tyr Pro Asn Arg Asp Lys Glu Pro Asn 305 310
315 320 His Met Lys Glu Arg Val Gln Met Leu
Ala Val Thr Lys Lys Ala Leu 325 330
335 Gly Ile Val 4421DNAArtificial SequenceOBPgpLYS forward
primer 44atgaaaaata gcgagaagaa t
214524DNAArtificial SequenceOBPgpLYS reverse primer 45aactattccg
agtgctttct ttgt
244654DNAArtificial SequencePKOBPgpLYS forward primer 46atgggatcca
aacgcaagaa acgtaagaaa cgcaaaaaaa atagcgagaa gaat
5447336PRTunknownOBPgpLYS with His-tag 47Met Lys Asn Ser Glu Lys Asn Ala
Ser Ile Ile Met Ser Ile Gln Arg 1 5 10
15 Thr Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp
Gly Leu Phe 20 25 30
Gly Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr
35 40 45 Pro Asn Phe Ser
Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu 50
55 60 Ser Val Phe Thr Phe Leu Gln Thr
Ala Leu Ala Gly Val Gly Leu Tyr 65 70
75 80 Thr Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser
Gln Gly Ala Ile 85 90
95 Asp Ala Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala
100 105 110 Gly Ser Thr
Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys His Met 115
120 125 Ser Ile Glu Gln Leu Arg Ala Met
Leu Pro Thr Asp Arg Gln Gly Tyr 130 135
140 Ala Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp
Ile Phe Glu 145 150 155
160 Ile Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile Leu His
165 170 175 Glu Thr Ala Cys
Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala 180
185 190 Tyr Glu Gly Arg Ala Asp Leu Gly Asn
Thr Arg Pro Gly Asp Gly Pro 195 200
205 Leu Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg Leu
Asn Tyr 210 215 220
Val Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe 225
230 235 240 Asp Ile Thr Ser Ser
Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro 245
250 255 Leu Leu Ala Ala Leu Ala Ser Gly Tyr Phe
Trp Arg Phe Ile Lys Pro 260 265
270 Lys Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser
Val 275 280 285 Tyr
Val Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg 290
295 300 Asp Lys Glu Pro Asn His
Met Lys Glu Arg Val Gln Met Leu Ala Val 305 310
315 320 Thr Lys Lys Ala Leu Gly Ile Val Lys Gly His
His His His His His 325 330
335 481011DNAunknownOBPgpLYS with additional His-tag 48atgaaaaata
gcgagaagaa tgcatcgata attatgtcga tacagagaac gctcgcttca 60ctctcactct
atggaggccg catcgacggc ctctttggag agaagtgtcg tggggctatc 120atcttgatgc
tgaataaggt ctatcctaat ttcagcacca acaaacttcc gagtaacaca 180tatgaagcgg
aatccgtgtt cacgtttctc cagactgctt tggctggtgt tggtctttat 240accattacta
ttgatggtaa atggggtggt acttctcaag gtgctattga cgccctcgtc 300aagtcttacc
gtcaaattac cgaagcggag cgagctgggt cgacgttgcc attaggtctt 360gctactgtga
tgtctaagca tatgtctatt gaacagttga gagcaatgct ccctaccgat 420agacaaggat
atgctgaagt ttatatcgat cctttaaatg agacgatgga tatatttgaa 480ataaatactc
cattacgaat tgctcatttc atggcccaaa tcctccacga aacggcgtgt 540tttaaatata
ccgaagaact ggcgagcggt aaggcttatg agggtcgtgc tgatttaggt 600aatactcgac
caggtgatgg accactgttt aaaggtcgtg gattattaca aattaccggg 660cgactgaatt
atgtgaaatg ccaagtgtat ttgagagaga agttaaagga ccctactttc 720gacattacgt
cgtctgtaac ttgtgcccaa cagctctccg aaagtccact tcttgctgca 780ttggcatcgg
gctacttctg gagattcatc aaacctaaac tcaatgaaac ggctgataaa 840gacgatatct
attgggtttc tgtttatgtc aatggttacg ctaaacaagc gaatccttat 900taccctaacc
gggataagga acccaaccat atgaaagaac gtgtccaaat gcttgcagtg 960acaaagaaag
cactcggaat agttaagggt catcatcacc atcaccattg a
101149347PRTunknownPKOBPgpLYS with additional His-tag 49Met Gly Ser Lys
Arg Lys Lys Arg Lys Lys Arg Lys Lys Asn Ser Glu 1 5
10 15 Lys Asn Ala Ser Ile Ile Met Ser Ile
Gln Arg Thr Leu Ala Ser Leu 20 25
30 Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys
Cys Arg 35 40 45
Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr 50
55 60 Asn Lys Leu Pro Ser
Asn Thr Tyr Glu Ala Glu Ser Val Phe Thr Phe 65 70
75 80 Leu Gln Thr Ala Leu Ala Gly Val Gly Leu
Tyr Thr Ile Thr Ile Asp 85 90
95 Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val
Lys 100 105 110 Ser
Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro 115
120 125 Leu Gly Leu Ala Thr Val
Met Ser Lys His Met Ser Ile Glu Gln Leu 130 135
140 Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr
Ala Glu Val Tyr Ile 145 150 155
160 Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu
165 170 175 Arg Ile
Ala His Phe Met Ala Gln Ile Leu His Glu Thr Ala Cys Phe 180
185 190 Lys Tyr Thr Glu Glu Leu Ala
Ser Gly Lys Ala Tyr Glu Gly Arg Ala 195 200
205 Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu
Phe Lys Gly Arg 210 215 220
Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val 225
230 235 240 Tyr Leu Arg
Glu Lys Leu Lys Asp Pro Thr Phe Asp Ile Thr Ser Ser 245
250 255 Val Thr Cys Ala Gln Gln Leu Ser
Glu Ser Pro Leu Leu Ala Ala Leu 260 265
270 Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu
Asn Glu Thr 275 280 285
Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr 290
295 300 Ala Lys Gln Ala
Asn Pro Tyr Tyr Pro Asn Arg Asp Lys Glu Pro Asn 305 310
315 320 His Met Lys Glu Arg Val Gln Met Leu
Ala Val Thr Lys Lys Ala Leu 325 330
335 Gly Ile Val Lys Gly His His His His His His
340 345 5024PRTunknownantimicrobial peptide
ascaphine 50Gly Ile Lys Asp Trp Ile Lys Gly Ala Ala Lys Lys Leu Ile Lys
Thr 1 5 10 15 Val
Ala Ser His Ile Ala Asn Gln 20
5117PRTunknownantimicrobial peptide apidaecine 51Ala Asn Arg Pro Val Tyr
Ile Pro Pro Pro Arg Pro Pro His Pro Arg 1 5
10 15 Leu 5222PRTunknownantimicrobial peptide
Nigrocine 52Gly Leu Leu Ser Lys Val Leu Gly Val Gly Lys Lys Val Leu Cys
Gly 1 5 10 15 Val
Ser Gly Leu Val Cys 20 5324PRTunknownantimicrobial
peptide Pseudin 53Gly Leu Asn Thr Leu Lys Lys Val Phe Gln Gly Leu His Glu
Ala Ile 1 5 10 15
Lys Leu Ile Asn Asn His Val Gln 20
54354PRTunknownAscaphine5-OBPgpLYS 54Met Gly Ile Lys Asp Trp Ile Lys Gly
Ala Ala Lys Lys Leu Ile Lys 1 5 10
15 Thr Val Ala Ser His Ile Ala Asn Gln Gly Ser Lys Asn Ser
Glu Lys 20 25 30
Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser
35 40 45 Leu Tyr Gly Gly
Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly 50
55 60 Ala Ile Ile Leu Met Leu Asn Lys
Val Tyr Pro Asn Phe Ser Thr Asn 65 70
75 80 Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
Phe Thr Phe Leu 85 90
95 Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly
100 105 110 Lys Trp Gly
Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser 115
120 125 Tyr Arg Gln Ile Thr Glu Ala Glu
Arg Ala Gly Ser Thr Leu Pro Leu 130 135
140 Gly Leu Ala Thr Val Met Ser Lys His Met Ser Ile Glu
Gln Leu Arg 145 150 155
160 Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp
165 170 175 Pro Leu Asn Glu
Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg 180
185 190 Ile Ala His Phe Met Ala Gln Ile Leu
His Glu Thr Ala Cys Phe Lys 195 200
205 Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg
Ala Asp 210 215 220
Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly 225
230 235 240 Leu Leu Gln Ile Thr
Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr 245
250 255 Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe
Asp Ile Thr Ser Ser Val 260 265
270 Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu
Ala 275 280 285 Ser
Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala 290
295 300 Asp Lys Asp Asp Ile Tyr
Trp Val Ser Val Tyr Val Asn Gly Tyr Ala 305 310
315 320 Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp
Lys Glu Pro Asn His 325 330
335 Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly
340 345 350 Ile Val
55362PRTunknownAscaphine5-OBPgpLYS with additional His-tag 55Met Gly Ile
Lys Asp Trp Ile Lys Gly Ala Ala Lys Lys Leu Ile Lys 1 5
10 15 Thr Val Ala Ser His Ile Ala Asn
Gln Gly Ser Lys Asn Ser Glu Lys 20 25
30 Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala
Ser Leu Ser 35 40 45
Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly 50
55 60 Ala Ile Ile Leu
Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr Asn 65 70
75 80 Lys Leu Pro Ser Asn Thr Tyr Glu Ala
Glu Ser Val Phe Thr Phe Leu 85 90
95 Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile
Asp Gly 100 105 110
Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser
115 120 125 Tyr Arg Gln Ile
Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro Leu 130
135 140 Gly Leu Ala Thr Val Met Ser Lys
His Met Ser Ile Glu Gln Leu Arg 145 150
155 160 Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu
Val Tyr Ile Asp 165 170
175 Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg
180 185 190 Ile Ala His
Phe Met Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys 195
200 205 Tyr Thr Glu Glu Leu Ala Ser Gly
Lys Ala Tyr Glu Gly Arg Ala Asp 210 215
220 Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys
Gly Arg Gly 225 230 235
240 Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr
245 250 255 Leu Arg Glu Lys
Leu Lys Asp Pro Thr Phe Asp Ile Thr Ser Ser Val 260
265 270 Thr Cys Ala Gln Gln Leu Ser Glu Ser
Pro Leu Leu Ala Ala Leu Ala 275 280
285 Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu
Thr Ala 290 295 300
Asp Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala 305
310 315 320 Lys Gln Ala Asn Pro
Tyr Tyr Pro Asn Arg Asp Lys Glu Pro Asn His 325
330 335 Met Lys Glu Arg Val Gln Met Leu Ala Val
Thr Lys Lys Ala His Gly 340 345
350 Ile Val Leu Glu His His His His His His 355
360 56347PRTunknownApidaecine-OBPgpLYS 56Met Ala Asn Arg
Pro Val Tyr Ile Pro Pro Pro Arg Pro Pro His Pro 1 5
10 15 Arg Leu Gly Ser Lys Asn Ser Glu Lys
Asn Ala Ser Ile Ile Met Ser 20 25
30 Ile Gln Arg Thr Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg
Ile Asp 35 40 45
Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn 50
55 60 Lys Val Tyr Pro Asn
Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr 65 70
75 80 Glu Ala Glu Ser Val Phe Thr Phe Leu Gln
Thr Ala Leu Ala Gly Val 85 90
95 Gly Leu Tyr Thr Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser
Gln 100 105 110 Gly
Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala 115
120 125 Glu Arg Ala Gly Ser Thr
Leu Pro Leu Gly Leu Ala Thr Val Met Ser 130 135
140 Lys His Met Ser Ile Glu Gln Leu Arg Ala Met
Leu Pro Thr Asp Arg 145 150 155
160 Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp
165 170 175 Ile Phe
Glu Ile Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln 180
185 190 Ile Leu His Glu Thr Ala Cys
Phe Lys Tyr Thr Glu Glu Leu Ala Ser 195 200
205 Gly Lys Ala Tyr Glu Gly Arg Ala Asp Leu Gly Asn
Thr Arg Pro Gly 210 215 220
Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg 225
230 235 240 Leu Asn Tyr
Val Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp 245
250 255 Pro Thr Phe Asp Ile Thr Ser Ser
Val Thr Cys Ala Gln Gln Leu Ser 260 265
270 Glu Ser Pro Leu Leu Ala Ala Leu Ala Ser Gly Tyr Phe
Trp Arg Phe 275 280 285
Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp 290
295 300 Val Ser Val Tyr
Val Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr 305 310
315 320 Pro Asn Arg Asp Lys Glu Pro Asn His
Met Lys Glu Arg Val Gln Met 325 330
335 Leu Ala Val Thr Lys Lys Ala His Gly Ile Val
340 345 57355PRTunknownApidaecine-OBPgpLYS with
additional His-tag 57Met Ala Asn Arg Pro Val Tyr Ile Pro Pro Pro Arg Pro
Pro His Pro 1 5 10 15
Arg Leu Gly Ser Lys Asn Ser Glu Lys Asn Ala Ser Ile Ile Met Ser
20 25 30 Ile Gln Arg Thr
Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp 35
40 45 Gly Leu Phe Gly Glu Lys Cys Arg Gly
Ala Ile Ile Leu Met Leu Asn 50 55
60 Lys Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu Pro Ser
Asn Thr Tyr 65 70 75
80 Glu Ala Glu Ser Val Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val
85 90 95 Gly Leu Tyr Thr
Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser Gln 100
105 110 Gly Ala Ile Asp Ala Leu Val Lys Ser
Tyr Arg Gln Ile Thr Glu Ala 115 120
125 Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu Ala Thr Val
Met Ser 130 135 140
Lys His Met Ser Ile Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg 145
150 155 160 Gln Gly Tyr Ala Glu
Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp 165
170 175 Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile
Ala His Phe Met Ala Gln 180 185
190 Ile Leu His Glu Thr Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala
Ser 195 200 205 Gly
Lys Ala Tyr Glu Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly 210
215 220 Asp Gly Pro Leu Phe Lys
Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg 225 230
235 240 Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg
Glu Lys Leu Lys Asp 245 250
255 Pro Thr Phe Asp Ile Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser
260 265 270 Glu Ser
Pro Leu Leu Ala Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe 275
280 285 Ile Lys Pro Lys Leu Asn Glu
Thr Ala Asp Lys Asp Asp Ile Tyr Trp 290 295
300 Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala
Asn Pro Tyr Tyr 305 310 315
320 Pro Asn Arg Asp Lys Glu Pro Asn His Met Lys Glu Arg Val Gln Met
325 330 335 Leu Ala Val
Thr Lys Lys Ala His Gly Ile Val Leu Glu His His His 340
345 350 His His His 355
58352PRTunknownNigrocine 2-OBPgpLYS 58Met Gly Leu Leu Ser Lys Val Leu Gly
Val Gly Lys Lys Val Leu Cys 1 5 10
15 Gly Val Ser Gly Leu Val Cys Gly Ser Lys Asn Ser Glu Lys
Asn Ala 20 25 30
Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser Leu Tyr
35 40 45 Gly Gly Arg Ile
Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile 50
55 60 Ile Leu Met Leu Asn Lys Val Tyr
Pro Asn Phe Ser Thr Asn Lys Leu 65 70
75 80 Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val Phe Thr
Phe Leu Gln Thr 85 90
95 Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly Lys Trp
100 105 110 Gly Gly Thr
Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg 115
120 125 Gln Ile Thr Glu Ala Glu Arg Ala
Gly Ser Thr Leu Pro Leu Gly Leu 130 135
140 Ala Thr Val Met Ser Lys His Met Ser Ile Glu Gln Leu
Arg Ala Met 145 150 155
160 Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro Leu
165 170 175 Asn Glu Thr Met
Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala 180
185 190 His Phe Met Ala Gln Ile Leu His Glu
Thr Ala Cys Phe Lys Tyr Thr 195 200
205 Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg Ala Asp
Leu Gly 210 215 220
Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu Leu 225
230 235 240 Gln Ile Thr Gly Arg
Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg 245
250 255 Glu Lys Leu Lys Asp Pro Thr Phe Asp Ile
Thr Ser Ser Val Thr Cys 260 265
270 Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu Ala Ser
Gly 275 280 285 Tyr
Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp Lys 290
295 300 Asp Asp Ile Tyr Trp Val
Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln 305 310
315 320 Ala Asn Pro Tyr Tyr Pro Asn Arg Asp Lys Glu
Pro Asn His Met Lys 325 330
335 Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly Ile Val
340 345 350
59360PRTunknownNigrocine 2-OBPgpLYS with additional His-tag 59Met Gly Leu
Leu Ser Lys Val Leu Gly Val Gly Lys Lys Val Leu Cys 1 5
10 15 Gly Val Ser Gly Leu Val Cys Gly
Ser Lys Asn Ser Glu Lys Asn Ala 20 25
30 Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu
Ser Leu Tyr 35 40 45
Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile 50
55 60 Ile Leu Met Leu
Asn Lys Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu 65 70
75 80 Pro Ser Asn Thr Tyr Glu Ala Glu Ser
Val Phe Thr Phe Leu Gln Thr 85 90
95 Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly
Lys Trp 100 105 110
Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg
115 120 125 Gln Ile Thr Glu
Ala Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu 130
135 140 Ala Thr Val Met Ser Lys His Met
Ser Ile Glu Gln Leu Arg Ala Met 145 150
155 160 Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr
Ile Asp Pro Leu 165 170
175 Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala
180 185 190 His Phe Met
Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys Tyr Thr 195
200 205 Glu Glu Leu Ala Ser Gly Lys Ala
Tyr Glu Gly Arg Ala Asp Leu Gly 210 215
220 Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg
Gly Leu Leu 225 230 235
240 Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg
245 250 255 Glu Lys Leu Lys
Asp Pro Thr Phe Asp Ile Thr Ser Ser Val Thr Cys 260
265 270 Ala Gln Gln Leu Ser Glu Ser Pro Leu
Leu Ala Ala Leu Ala Ser Gly 275 280
285 Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala
Asp Lys 290 295 300
Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln 305
310 315 320 Ala Asn Pro Tyr Tyr
Pro Asn Arg Asp Lys Glu Pro Asn His Met Lys 325
330 335 Glu Arg Val Gln Met Leu Ala Val Thr Lys
Lys Ala His Gly Ile Val 340 345
350 Leu Glu His His His His His His 355
360 60354PRTunknownPseudin 1-OBPgpLYS 60Met Gly Leu Asn Thr Leu Lys Lys
Val Phe Gln Gly Leu His Glu Ala 1 5 10
15 Ile Lys Leu Ile Asn Asn His Val Gln Gly Ser Lys Asn
Ser Glu Lys 20 25 30
Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser
35 40 45 Leu Tyr Gly Gly
Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly 50
55 60 Ala Ile Ile Leu Met Leu Asn Lys
Val Tyr Pro Asn Phe Ser Thr Asn 65 70
75 80 Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
Phe Thr Phe Leu 85 90
95 Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly
100 105 110 Lys Trp Gly
Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser 115
120 125 Tyr Arg Gln Ile Thr Glu Ala Glu
Arg Ala Gly Ser Thr Leu Pro Leu 130 135
140 Gly Leu Ala Thr Val Met Ser Lys His Met Ser Ile Glu
Gln Leu Arg 145 150 155
160 Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp
165 170 175 Pro Leu Asn Glu
Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg 180
185 190 Ile Ala His Phe Met Ala Gln Ile Leu
His Glu Thr Ala Cys Phe Lys 195 200
205 Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg
Ala Asp 210 215 220
Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly 225
230 235 240 Leu Leu Gln Ile Thr
Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr 245
250 255 Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe
Asp Ile Thr Ser Ser Val 260 265
270 Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu
Ala 275 280 285 Ser
Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala 290
295 300 Asp Lys Asp Asp Ile Tyr
Trp Val Ser Val Tyr Val Asn Gly Tyr Ala 305 310
315 320 Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp
Lys Glu Pro Asn His 325 330
335 Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly
340 345 350 Ile Val
61362PRTunknownPseudin 1-OBPgpLYS with additional His-tag 61Met Gly Leu
Asn Thr Leu Lys Lys Val Phe Gln Gly Leu His Glu Ala 1 5
10 15 Ile Lys Leu Ile Asn Asn His Val
Gln Gly Ser Lys Asn Ser Glu Lys 20 25
30 Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala
Ser Leu Ser 35 40 45
Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly 50
55 60 Ala Ile Ile Leu
Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr Asn 65 70
75 80 Lys Leu Pro Ser Asn Thr Tyr Glu Ala
Glu Ser Val Phe Thr Phe Leu 85 90
95 Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile
Asp Gly 100 105 110
Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser
115 120 125 Tyr Arg Gln Ile
Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro Leu 130
135 140 Gly Leu Ala Thr Val Met Ser Lys
His Met Ser Ile Glu Gln Leu Arg 145 150
155 160 Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu
Val Tyr Ile Asp 165 170
175 Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg
180 185 190 Ile Ala His
Phe Met Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys 195
200 205 Tyr Thr Glu Glu Leu Ala Ser Gly
Lys Ala Tyr Glu Gly Arg Ala Asp 210 215
220 Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys
Gly Arg Gly 225 230 235
240 Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr
245 250 255 Leu Arg Glu Lys
Leu Lys Asp Pro Thr Phe Asp Ile Thr Ser Ser Val 260
265 270 Thr Cys Ala Gln Gln Leu Ser Glu Ser
Pro Leu Leu Ala Ala Leu Ala 275 280
285 Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu
Thr Ala 290 295 300
Asp Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala 305
310 315 320 Lys Gln Ala Asn Pro
Tyr Tyr Pro Asn Arg Asp Lys Glu Pro Asn His 325
330 335 Met Lys Glu Arg Val Gln Met Leu Ala Val
Thr Lys Lys Ala His Gly 340 345
350 Ile Val Leu Glu His His His His His His 355
360 62369PRTunknownSarcotoxin IA-OBPgpLYS 62Met Gly Trp
Leu Lys Lys Ile Gly Lys Lys Ile Glu Arg Val Gly Gln 1 5
10 15 His Thr Arg Asp Ala Thr Ile Gln
Gly Leu Gly Ile Ala Gln Gln Ala 20 25
30 Ala Asn Val Ala Ala Thr Ala Arg Gly Ser Lys Asn Ser
Glu Lys Asn 35 40 45
Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser Leu 50
55 60 Tyr Gly Gly Arg
Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala 65 70
75 80 Ile Ile Leu Met Leu Asn Lys Val Tyr
Pro Asn Phe Ser Thr Asn Lys 85 90
95 Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val Phe Thr Phe
Leu Gln 100 105 110
Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly Lys
115 120 125 Trp Gly Gly Thr
Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr 130
135 140 Arg Gln Ile Thr Glu Ala Glu Arg
Ala Gly Ser Thr Leu Pro Leu Gly 145 150
155 160 Leu Ala Thr Val Met Ser Lys His Met Ser Ile Glu
Gln Leu Arg Ala 165 170
175 Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro
180 185 190 Leu Asn Glu
Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile 195
200 205 Ala His Phe Met Ala Gln Ile Leu
His Glu Thr Ala Cys Phe Lys Tyr 210 215
220 Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg
Ala Asp Leu 225 230 235
240 Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu
245 250 255 Leu Gln Ile Thr
Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu 260
265 270 Arg Glu Lys Leu Lys Asp Pro Thr Phe
Asp Ile Thr Ser Ser Val Thr 275 280
285 Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu
Ala Ser 290 295 300
Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp 305
310 315 320 Lys Asp Asp Ile Tyr
Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys 325
330 335 Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp
Lys Glu Pro Asn His Met 340 345
350 Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly
Ile 355 360 365 Val
63377PRTunknownSarcotoxin IA-OBPgpLYS with additional His-tag 63Met Gly
Trp Leu Lys Lys Ile Gly Lys Lys Ile Glu Arg Val Gly Gln 1 5
10 15 His Thr Arg Asp Ala Thr Ile
Gln Gly Leu Gly Ile Ala Gln Gln Ala 20 25
30 Ala Asn Val Ala Ala Thr Ala Arg Gly Ser Lys Asn
Ser Glu Lys Asn 35 40 45
Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser Leu
50 55 60 Tyr Gly Gly
Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala 65
70 75 80 Ile Ile Leu Met Leu Asn Lys
Val Tyr Pro Asn Phe Ser Thr Asn Lys 85
90 95 Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
Phe Thr Phe Leu Gln 100 105
110 Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly
Lys 115 120 125 Trp
Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr 130
135 140 Arg Gln Ile Thr Glu Ala
Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly 145 150
155 160 Leu Ala Thr Val Met Ser Lys His Met Ser Ile
Glu Gln Leu Arg Ala 165 170
175 Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro
180 185 190 Leu Asn
Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile 195
200 205 Ala His Phe Met Ala Gln Ile
Leu His Glu Thr Ala Cys Phe Lys Tyr 210 215
220 Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly
Arg Ala Asp Leu 225 230 235
240 Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu
245 250 255 Leu Gln Ile
Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu 260
265 270 Arg Glu Lys Leu Lys Asp Pro Thr
Phe Asp Ile Thr Ser Ser Val Thr 275 280
285 Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala
Leu Ala Ser 290 295 300
Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp 305
310 315 320 Lys Asp Asp Ile
Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys 325
330 335 Gln Ala Asn Pro Tyr Tyr Pro Asn Arg
Asp Lys Glu Pro Asn His Met 340 345
350 Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His
Gly Ile 355 360 365
Val Leu Glu His His His His His His 370 375
64359PRTunknownSarcotoxin IA-OBPgpLYS 64Met Arg Gly Leu Arg Arg Leu Gly
Arg Lys Ile Ala His Gly Val Lys 1 5 10
15 Lys Tyr Gly Pro Thr Val Leu Arg Ile Ile Arg Ile Ala
Gly Gly Ser 20 25 30
Lys Asn Ser Glu Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr
35 40 45 Leu Ala Ser Leu
Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly 50
55 60 Glu Lys Cys Arg Gly Ala Ile Ile
Leu Met Leu Asn Lys Val Tyr Pro 65 70
75 80 Asn Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr
Glu Ala Glu Ser 85 90
95 Val Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr
100 105 110 Ile Thr Ile
Asp Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp 115
120 125 Ala Leu Val Lys Ser Tyr Arg Gln
Ile Thr Glu Ala Glu Arg Ala Gly 130 135
140 Ser Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys
His Met Ser 145 150 155
160 Ile Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala
165 170 175 Glu Val Tyr Ile
Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile 180
185 190 Asn Thr Pro Leu Arg Ile Ala His Phe
Met Ala Gln Ile Leu His Glu 195 200
205 Thr Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys
Ala Tyr 210 215 220
Glu Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu 225
230 235 240 Phe Lys Gly Arg Gly
Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val 245
250 255 Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu
Lys Asp Pro Thr Phe Asp 260 265
270 Ile Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro
Leu 275 280 285 Leu
Ala Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys 290
295 300 Leu Asn Glu Thr Ala Asp
Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr 305 310
315 320 Val Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr
Tyr Pro Asn Arg Asp 325 330
335 Lys Glu Pro Asn His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr
340 345 350 Lys Lys
Ala His Gly Ile Val 355 65367PRTunknownSarcotoxin
IA-OBPgpLYS with additional His-tag 65Met Arg Gly Leu Arg Arg Leu Gly Arg
Lys Ile Ala His Gly Val Lys 1 5 10
15 Lys Tyr Gly Pro Thr Val Leu Arg Ile Ile Arg Ile Ala Gly
Gly Ser 20 25 30
Lys Asn Ser Glu Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr
35 40 45 Leu Ala Ser Leu
Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly 50
55 60 Glu Lys Cys Arg Gly Ala Ile Ile
Leu Met Leu Asn Lys Val Tyr Pro 65 70
75 80 Asn Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr
Glu Ala Glu Ser 85 90
95 Val Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr
100 105 110 Ile Thr Ile
Asp Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp 115
120 125 Ala Leu Val Lys Ser Tyr Arg Gln
Ile Thr Glu Ala Glu Arg Ala Gly 130 135
140 Ser Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys
His Met Ser 145 150 155
160 Ile Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala
165 170 175 Glu Val Tyr Ile
Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile 180
185 190 Asn Thr Pro Leu Arg Ile Ala His Phe
Met Ala Gln Ile Leu His Glu 195 200
205 Thr Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys
Ala Tyr 210 215 220
Glu Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu 225
230 235 240 Phe Lys Gly Arg Gly
Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val 245
250 255 Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu
Lys Asp Pro Thr Phe Asp 260 265
270 Ile Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro
Leu 275 280 285 Leu
Ala Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys 290
295 300 Leu Asn Glu Thr Ala Asp
Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr 305 310
315 320 Val Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr
Tyr Pro Asn Arg Asp 325 330
335 Lys Glu Pro Asn His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr
340 345 350 Lys Lys
Ala His Gly Ile Val Leu Glu His His His His His His 355
360 365 66366PRTunknownCecropin A
(A.aegypti)-OBPgpLYS 66Met Gly Gly Leu Lys Lys Leu Gly Lys Lys Leu Glu
Gly Ala Gly Lys 1 5 10
15 Arg Val Phe Asn Ala Ala Glu Lys Ala Leu Pro Val Val Ala Gly Ala
20 25 30 Lys Ala Leu
Arg Lys Gly Ser Lys Asn Ser Glu Lys Asn Ala Ser Ile 35
40 45 Ile Met Ser Ile Gln Arg Thr Leu
Ala Ser Leu Ser Leu Tyr Gly Gly 50 55
60 Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala
Ile Ile Leu 65 70 75
80 Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu Pro Ser
85 90 95 Asn Thr Tyr Glu
Ala Glu Ser Val Phe Thr Phe Leu Gln Thr Ala Leu 100
105 110 Ala Gly Val Gly Leu Tyr Thr Ile Thr
Ile Asp Gly Lys Trp Gly Gly 115 120
125 Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg
Gln Ile 130 135 140
Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu Ala Thr 145
150 155 160 Val Met Ser Lys His
Met Ser Ile Glu Gln Leu Arg Ala Met Leu Pro 165
170 175 Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr
Ile Asp Pro Leu Asn Glu 180 185
190 Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala His
Phe 195 200 205 Met
Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys Tyr Thr Glu Glu 210
215 220 Leu Ala Ser Gly Lys Ala
Tyr Glu Gly Arg Ala Asp Leu Gly Asn Thr 225 230
235 240 Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg
Gly Leu Leu Gln Ile 245 250
255 Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu Lys
260 265 270 Leu Lys
Asp Pro Thr Phe Asp Ile Thr Ser Ser Val Thr Cys Ala Gln 275
280 285 Gln Leu Ser Glu Ser Pro Leu
Leu Ala Ala Leu Ala Ser Gly Tyr Phe 290 295
300 Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala
Asp Lys Asp Asp 305 310 315
320 Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala Asn
325 330 335 Pro Tyr Tyr
Pro Asn Arg Asp Lys Glu Pro Asn His Met Lys Glu Arg 340
345 350 Val Gln Met Leu Ala Val Thr Lys
Lys Ala His Gly Ile Val 355 360
365 67374PRTunknownCecropin A (A.aegypti)-OBPgpLYS with additional
His-tag 67Met Gly Gly Leu Lys Lys Leu Gly Lys Lys Leu Glu Gly Ala Gly
Lys 1 5 10 15 Arg
Val Phe Asn Ala Ala Glu Lys Ala Leu Pro Val Val Ala Gly Ala
20 25 30 Lys Ala Leu Arg Lys
Gly Ser Lys Asn Ser Glu Lys Asn Ala Ser Ile 35
40 45 Ile Met Ser Ile Gln Arg Thr Leu Ala
Ser Leu Ser Leu Tyr Gly Gly 50 55
60 Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala
Ile Ile Leu 65 70 75
80 Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu Pro Ser
85 90 95 Asn Thr Tyr Glu
Ala Glu Ser Val Phe Thr Phe Leu Gln Thr Ala Leu 100
105 110 Ala Gly Val Gly Leu Tyr Thr Ile Thr
Ile Asp Gly Lys Trp Gly Gly 115 120
125 Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg
Gln Ile 130 135 140
Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu Ala Thr 145
150 155 160 Val Met Ser Lys His
Met Ser Ile Glu Gln Leu Arg Ala Met Leu Pro 165
170 175 Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr
Ile Asp Pro Leu Asn Glu 180 185
190 Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala His
Phe 195 200 205 Met
Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys Tyr Thr Glu Glu 210
215 220 Leu Ala Ser Gly Lys Ala
Tyr Glu Gly Arg Ala Asp Leu Gly Asn Thr 225 230
235 240 Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg
Gly Leu Leu Gln Ile 245 250
255 Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu Lys
260 265 270 Leu Lys
Asp Pro Thr Phe Asp Ile Thr Ser Ser Val Thr Cys Ala Gln 275
280 285 Gln Leu Ser Glu Ser Pro Leu
Leu Ala Ala Leu Ala Ser Gly Tyr Phe 290 295
300 Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala
Asp Lys Asp Asp 305 310 315
320 Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala Asn
325 330 335 Pro Tyr Tyr
Pro Asn Arg Asp Lys Glu Pro Asn His Met Lys Glu Arg 340
345 350 Val Gln Met Leu Ala Val Thr Lys
Lys Ala His Gly Ile Val Leu Glu 355 360
365 His His His His His His 370
6813PRTunknownantimicrobial peptide Alpha 4 68Pro Asn Arg Ala Lys Arg Val
Ile Thr Thr Phe Arg Thr 1 5 10
69327PRTunknownOBPgpLYS fragment 69Lys Asn Ser Glu Lys Asn Ala Ser Ile
Ile Met Ser Ile Gln Arg Thr 1 5 10
15 Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu
Phe Gly 20 25 30
Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr Pro
35 40 45 Asn Phe Ser Thr
Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser 50
55 60 Val Phe Thr Phe Leu Gln Thr Ala
Leu Ala Gly Val Gly Leu Tyr Thr 65 70
75 80 Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser Gln
Gly Ala Ile Asp 85 90
95 Ala Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala Gly
100 105 110 Ser Thr Leu
Pro Leu Gly Leu Ala Thr Val Met Ser Lys His Met Ser 115
120 125 Ile Glu Gln Leu Arg Ala Met Leu
Pro Thr Asp Arg Gln Gly Tyr Ala 130 135
140 Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp Ile
Phe Glu Ile 145 150 155
160 Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile Leu His Glu
165 170 175 Thr Ala Cys Phe
Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr 180
185 190 Glu Gly Arg Ala Asp Leu Gly Asn Thr
Arg Pro Gly Asp Gly Pro Leu 195 200
205 Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn
Tyr Val 210 215 220
Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe Asp 225
230 235 240 Ile Thr Ser Ser Val
Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu 245
250 255 Leu Ala Ala Leu Ala Ser Gly Tyr Phe Trp
Arg Phe Ile Lys Pro Lys 260 265
270 Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val
Tyr 275 280 285 Val
Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp 290
295 300 Lys Glu Pro Asn His Met
Lys Glu Arg Val Gln Met Leu Ala Val Thr 305 310
315 320 Lys Lys Ala Leu Gly Ile Val
325 7018PRTunknownantimicropial peptide Artilysin1 70Gly Phe Phe
Ile Pro Ala Val Ile Leu Pro Ser Ile Ala Phe Leu Ile 1 5
10 15 Val Pro
7125PRTunknownantimicrobial peptide Artilysin2 71Gly Lys Pro Gly Trp Leu
Ile Lys Lys Ala Leu Val Phe Lys Lys Leu 1 5
10 15 Ile Arg Arg Pro Leu Lys Arg Leu Ala
20 25 7219PRTunknownantimicrobial peptide Parasin 1
72Lys Gly Arg Gly Lys Gln Gly Gly Lys Val Arg Ala Lys Ala Lys Thr 1
5 10 15 Arg Ser Ser
7325PRTunknownantimicrobial peptide Lycotoxin 73Ile Trp Leu Thr Ala Leu
Lys Phe Leu Gly Lys His Ala Ala Lys Lys 1 5
10 15 Leu Ala Lys Gln Gln Leu Ser Lys Leu
20 25 74346PRTunknownAlpha4-OBPgpLYS 74Met Gly Ser
Pro Asn Arg Ala Lys Arg Val Ile Thr Thr Phe Arg Thr 1 5
10 15 Gly Ser Ser Lys Asn Ser Glu Lys
Asn Ala Ser Ile Ile Met Ser Ile 20 25
30 Gln Arg Thr Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg
Ile Asp Gly 35 40 45
Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys 50
55 60 Val Tyr Pro Asn
Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu 65 70
75 80 Ala Glu Ser Val Phe Thr Phe Leu Gln
Thr Ala Leu Ala Gly Val Gly 85 90
95 Leu Tyr Thr Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser
Gln Gly 100 105 110
Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu
115 120 125 Arg Ala Gly Ser
Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys 130
135 140 His Met Ser Ile Glu Gln Leu Arg
Ala Met Leu Pro Thr Asp Arg Gln 145 150
155 160 Gly Tyr Ala Glu Val Tyr Ile Asp Pro Leu Asn Glu
Thr Met Asp Ile 165 170
175 Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile
180 185 190 Leu His Glu
Thr Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly 195
200 205 Lys Ala Tyr Glu Gly Arg Ala Asp
Leu Gly Asn Thr Arg Pro Gly Asp 210 215
220 Gly Pro Leu Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr
Gly Arg Leu 225 230 235
240 Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro
245 250 255 Thr Phe Asp Ile
Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu 260
265 270 Ser Pro Leu Leu Ala Ala Leu Ala Ser
Gly Tyr Phe Trp Arg Phe Ile 275 280
285 Lys Pro Lys Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr
Trp Val 290 295 300
Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro 305
310 315 320 Asn Arg Asp Lys Glu
Pro Asn His Met Lys Glu Arg Val Gln Met Leu 325
330 335 Ala Val Thr Lys Lys Ala His Gly Ile Val
340 345 75354PRTunknownAlpha4-OBPgpLYS
with additional His-tag 75Met Gly Ser Pro Asn Arg Ala Lys Arg Val Ile Thr
Thr Phe Arg Thr 1 5 10
15 Gly Ser Ser Lys Asn Ser Glu Lys Asn Ala Ser Ile Ile Met Ser Ile
20 25 30 Gln Arg Thr
Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp Gly 35
40 45 Leu Phe Gly Glu Lys Cys Arg Gly
Ala Ile Ile Leu Met Leu Asn Lys 50 55
60 Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu Pro Ser Asn
Thr Tyr Glu 65 70 75
80 Ala Glu Ser Val Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val Gly
85 90 95 Leu Tyr Thr Ile
Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser Gln Gly 100
105 110 Ala Ile Asp Ala Leu Val Lys Ser Tyr
Arg Gln Ile Thr Glu Ala Glu 115 120
125 Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu Ala Thr Val Met
Ser Lys 130 135 140
His Met Ser Ile Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg Gln 145
150 155 160 Gly Tyr Ala Glu Val
Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp Ile 165
170 175 Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala
His Phe Met Ala Gln Ile 180 185
190 Leu His Glu Thr Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser
Gly 195 200 205 Lys
Ala Tyr Glu Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp 210
215 220 Gly Pro Leu Phe Lys Gly
Arg Gly Leu Leu Gln Ile Thr Gly Arg Leu 225 230
235 240 Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu
Lys Leu Lys Asp Pro 245 250
255 Thr Phe Asp Ile Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu
260 265 270 Ser Pro
Leu Leu Ala Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile 275
280 285 Lys Pro Lys Leu Asn Glu Thr
Ala Asp Lys Asp Asp Ile Tyr Trp Val 290 295
300 Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala Asn
Pro Tyr Tyr Pro 305 310 315
320 Asn Arg Asp Lys Glu Pro Asn His Met Lys Glu Arg Val Gln Met Leu
325 330 335 Ala Val Thr
Lys Lys Ala His Gly Ile Val Lys Gly His His His His 340
345 350 His His 76338PRTunknownOBPgpLys
76Met Gly Ser Phe Phe Val Ala Pro Gly Ser Ser Lys Asn Ser Glu Lys 1
5 10 15 Asn Ala Ser Ile
Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser 20
25 30 Leu Tyr Gly Gly Arg Ile Asp Gly Leu
Phe Gly Glu Lys Cys Arg Gly 35 40
45 Ala Ile Ile Leu Met Leu Asn Lys Val Tyr Pro Asn Phe Ser
Thr Asn 50 55 60
Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val Phe Thr Phe Leu 65
70 75 80 Gln Thr Ala Leu Ala
Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly 85
90 95 Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile
Asp Ala Leu Val Lys Ser 100 105
110 Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro
Leu 115 120 125 Gly
Leu Ala Thr Val Met Ser Lys His Met Ser Ile Glu Gln Leu Arg 130
135 140 Ala Met Leu Pro Thr Asp
Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp 145 150
155 160 Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile
Asn Thr Pro Leu Arg 165 170
175 Ile Ala His Phe Met Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys
180 185 190 Tyr Thr
Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg Ala Asp 195
200 205 Leu Gly Asn Thr Arg Pro Gly
Asp Gly Pro Leu Phe Lys Gly Arg Gly 210 215
220 Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys
Cys Gln Val Tyr 225 230 235
240 Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe Asp Ile Thr Ser Ser Val
245 250 255 Thr Cys Ala
Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu Ala 260
265 270 Ser Gly Tyr Phe Trp Arg Phe Ile
Lys Pro Lys Leu Asn Glu Thr Ala 275 280
285 Asp Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn
Gly Tyr Ala 290 295 300
Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp Lys Glu Pro Asn His 305
310 315 320 Met Lys Glu Arg
Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly 325
330 335 Ile Val 77346PRTunknownOBPgpLys
with additional His-tag 77Met Gly Ser Phe Phe Val Ala Pro Gly Ser Ser Lys
Asn Ser Glu Lys 1 5 10
15 Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser
20 25 30 Leu Tyr Gly
Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly 35
40 45 Ala Ile Ile Leu Met Leu Asn Lys
Val Tyr Pro Asn Phe Ser Thr Asn 50 55
60 Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val Phe
Thr Phe Leu 65 70 75
80 Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly
85 90 95 Lys Trp Gly Gly
Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser 100
105 110 Tyr Arg Gln Ile Thr Glu Ala Glu Arg
Ala Gly Ser Thr Leu Pro Leu 115 120
125 Gly Leu Ala Thr Val Met Ser Lys His Met Ser Ile Glu Gln
Leu Arg 130 135 140
Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp 145
150 155 160 Pro Leu Asn Glu Thr
Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg 165
170 175 Ile Ala His Phe Met Ala Gln Ile Leu His
Glu Thr Ala Cys Phe Lys 180 185
190 Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg Ala
Asp 195 200 205 Leu
Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly 210
215 220 Leu Leu Gln Ile Thr Gly
Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr 225 230
235 240 Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe Asp
Ile Thr Ser Ser Val 245 250
255 Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu Ala
260 265 270 Ser Gly
Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala 275
280 285 Asp Lys Asp Asp Ile Tyr Trp
Val Ser Val Tyr Val Asn Gly Tyr Ala 290 295
300 Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp Lys
Glu Pro Asn His 305 310 315
320 Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly
325 330 335 Ile Val Lys
Gly His His His His His His 340 345
78351PRTunknownArtilys1-OBPgpLys 78Met Gly Ser Gly Phe Phe Ile Pro Ala
Val Ile Leu Pro Ser Ile Ala 1 5 10
15 Phe Leu Ile Val Pro Gly Ser Ser Lys Asn Ser Glu Lys Asn
Ala Ser 20 25 30
Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser Leu Tyr Gly
35 40 45 Gly Arg Ile Asp
Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile Ile 50
55 60 Leu Met Leu Asn Lys Val Tyr Pro
Asn Phe Ser Thr Asn Lys Leu Pro 65 70
75 80 Ser Asn Thr Tyr Glu Ala Glu Ser Val Phe Thr Phe
Leu Gln Thr Ala 85 90
95 Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly Lys Trp Gly
100 105 110 Gly Thr Ser
Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg Gln 115
120 125 Ile Thr Glu Ala Glu Arg Ala Gly
Ser Thr Leu Pro Leu Gly Leu Ala 130 135
140 Thr Val Met Ser Lys His Met Ser Ile Glu Gln Leu Arg
Ala Met Leu 145 150 155
160 Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro Leu Asn
165 170 175 Glu Thr Met Asp
Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala His 180
185 190 Phe Met Ala Gln Ile Leu His Glu Thr
Ala Cys Phe Lys Tyr Thr Glu 195 200
205 Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg Ala Asp Leu
Gly Asn 210 215 220
Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu Leu Gln 225
230 235 240 Ile Thr Gly Arg Leu
Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu 245
250 255 Lys Leu Lys Asp Pro Thr Phe Asp Ile Thr
Ser Ser Val Thr Cys Ala 260 265
270 Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu Ala Ser Gly
Tyr 275 280 285 Phe
Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp Lys Asp 290
295 300 Asp Ile Tyr Trp Val Ser
Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala 305 310
315 320 Asn Pro Tyr Tyr Pro Asn Arg Asp Lys Glu Pro
Asn His Met Lys Glu 325 330
335 Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly Ile Val
340 345 350
79359PRTunknownArtilys1-OBPgpLys with additional His-tag 79Met Gly Ser
Gly Phe Phe Ile Pro Ala Val Ile Leu Pro Ser Ile Ala 1 5
10 15 Phe Leu Ile Val Pro Gly Ser Ser
Lys Asn Ser Glu Lys Asn Ala Ser 20 25
30 Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser
Leu Tyr Gly 35 40 45
Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile Ile 50
55 60 Leu Met Leu Asn
Lys Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu Pro 65 70
75 80 Ser Asn Thr Tyr Glu Ala Glu Ser Val
Phe Thr Phe Leu Gln Thr Ala 85 90
95 Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly Lys
Trp Gly 100 105 110
Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg Gln
115 120 125 Ile Thr Glu Ala
Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu Ala 130
135 140 Thr Val Met Ser Lys His Met Ser
Ile Glu Gln Leu Arg Ala Met Leu 145 150
155 160 Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile
Asp Pro Leu Asn 165 170
175 Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala His
180 185 190 Phe Met Ala
Gln Ile Leu His Glu Thr Ala Cys Phe Lys Tyr Thr Glu 195
200 205 Glu Leu Ala Ser Gly Lys Ala Tyr
Glu Gly Arg Ala Asp Leu Gly Asn 210 215
220 Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly
Leu Leu Gln 225 230 235
240 Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg Glu
245 250 255 Lys Leu Lys Asp
Pro Thr Phe Asp Ile Thr Ser Ser Val Thr Cys Ala 260
265 270 Gln Gln Leu Ser Glu Ser Pro Leu Leu
Ala Ala Leu Ala Ser Gly Tyr 275 280
285 Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp
Lys Asp 290 295 300
Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln Ala 305
310 315 320 Asn Pro Tyr Tyr Pro
Asn Arg Asp Lys Glu Pro Asn His Met Lys Glu 325
330 335 Arg Val Gln Met Leu Ala Val Thr Lys Lys
Ala His Gly Ile Val Lys 340 345
350 Gly His His His His His His 355
80358PRTunknownArtilys2-OBPgpLYS 80Met Gly Ser Gly Lys Pro Gly Trp Leu
Ile Lys Lys Ala Leu Val Phe 1 5 10
15 Lys Lys Leu Ile Arg Arg Pro Leu Lys Arg Leu Ala Gly Ser
Ser Lys 20 25 30
Asn Ser Glu Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu
35 40 45 Ala Ser Leu Ser
Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu 50
55 60 Lys Cys Arg Gly Ala Ile Ile Leu
Met Leu Asn Lys Val Tyr Pro Asn 65 70
75 80 Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu
Ala Glu Ser Val 85 90
95 Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile
100 105 110 Thr Ile Asp
Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala 115
120 125 Leu Val Lys Ser Tyr Arg Gln Ile
Thr Glu Ala Glu Arg Ala Gly Ser 130 135
140 Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys His
Met Ser Ile 145 150 155
160 Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu
165 170 175 Val Tyr Ile Asp
Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn 180
185 190 Thr Pro Leu Arg Ile Ala His Phe Met
Ala Gln Ile Leu His Glu Thr 195 200
205 Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala
Tyr Glu 210 215 220
Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe 225
230 235 240 Lys Gly Arg Gly Leu
Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys 245
250 255 Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys
Asp Pro Thr Phe Asp Ile 260 265
270 Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu
Leu 275 280 285 Ala
Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu 290
295 300 Asn Glu Thr Ala Asp Lys
Asp Asp Ile Tyr Trp Val Ser Val Tyr Val 305 310
315 320 Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr
Pro Asn Arg Asp Lys 325 330
335 Glu Pro Asn His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys
340 345 350 Lys Ala
His Gly Ile Val 355 81366PRTunknownArtilys2-OBPgpLYS
with additional His-tag 81Met Gly Ser Gly Lys Pro Gly Trp Leu Ile Lys Lys
Ala Leu Val Phe 1 5 10
15 Lys Lys Leu Ile Arg Arg Pro Leu Lys Arg Leu Ala Gly Ser Ser Lys
20 25 30 Asn Ser Glu
Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu 35
40 45 Ala Ser Leu Ser Leu Tyr Gly Gly
Arg Ile Asp Gly Leu Phe Gly Glu 50 55
60 Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val
Tyr Pro Asn 65 70 75
80 Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
85 90 95 Phe Thr Phe Leu
Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile 100
105 110 Thr Ile Asp Gly Lys Trp Gly Gly Thr
Ser Gln Gly Ala Ile Asp Ala 115 120
125 Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala
Gly Ser 130 135 140
Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys His Met Ser Ile 145
150 155 160 Glu Gln Leu Arg Ala
Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu 165
170 175 Val Tyr Ile Asp Pro Leu Asn Glu Thr Met
Asp Ile Phe Glu Ile Asn 180 185
190 Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile Leu His Glu
Thr 195 200 205 Ala
Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu 210
215 220 Gly Arg Ala Asp Leu Gly
Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe 225 230
235 240 Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg
Leu Asn Tyr Val Lys 245 250
255 Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe Asp Ile
260 265 270 Thr Ser
Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu 275
280 285 Ala Ala Leu Ala Ser Gly Tyr
Phe Trp Arg Phe Ile Lys Pro Lys Leu 290 295
300 Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val
Ser Val Tyr Val 305 310 315
320 Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp Lys
325 330 335 Glu Pro Asn
His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys 340
345 350 Lys Ala His Gly Ile Val Lys Gly
His His His His His His 355 360
365 82352PRTunknownParasin1-OBPgpLys 82Met Gly Ser Lys Gly Arg Gly
Lys Gln Gly Gly Lys Val Arg Ala Lys 1 5
10 15 Ala Lys Thr Arg Ser Ser Gly Ser Ser Lys Asn
Ser Glu Lys Asn Ala 20 25
30 Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu Ser Leu
Tyr 35 40 45 Gly
Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile 50
55 60 Ile Leu Met Leu Asn Lys
Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu 65 70
75 80 Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val Phe
Thr Phe Leu Gln Thr 85 90
95 Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly Lys Trp
100 105 110 Gly Gly
Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg 115
120 125 Gln Ile Thr Glu Ala Glu Arg
Ala Gly Ser Thr Leu Pro Leu Gly Leu 130 135
140 Ala Thr Val Met Ser Lys His Met Ser Ile Glu Gln
Leu Arg Ala Met 145 150 155
160 Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile Asp Pro Leu
165 170 175 Asn Glu Thr
Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala 180
185 190 His Phe Met Ala Gln Ile Leu His
Glu Thr Ala Cys Phe Lys Tyr Thr 195 200
205 Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg Ala
Asp Leu Gly 210 215 220
Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg Gly Leu Leu 225
230 235 240 Gln Ile Thr Gly
Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg 245
250 255 Glu Lys Leu Lys Asp Pro Thr Phe Asp
Ile Thr Ser Ser Val Thr Cys 260 265
270 Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu Ala
Ser Gly 275 280 285
Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala Asp Lys 290
295 300 Asp Asp Ile Tyr Trp
Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln 305 310
315 320 Ala Asn Pro Tyr Tyr Pro Asn Arg Asp Lys
Glu Pro Asn His Met Lys 325 330
335 Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His Gly Ile
Val 340 345 350
83360PRTunknownParasin1-OBPgpLys with additional His-tag 83Met Gly Ser
Lys Gly Arg Gly Lys Gln Gly Gly Lys Val Arg Ala Lys 1 5
10 15 Ala Lys Thr Arg Ser Ser Gly Ser
Ser Lys Asn Ser Glu Lys Asn Ala 20 25
30 Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu
Ser Leu Tyr 35 40 45
Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg Gly Ala Ile 50
55 60 Ile Leu Met Leu
Asn Lys Val Tyr Pro Asn Phe Ser Thr Asn Lys Leu 65 70
75 80 Pro Ser Asn Thr Tyr Glu Ala Glu Ser
Val Phe Thr Phe Leu Gln Thr 85 90
95 Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp Gly
Lys Trp 100 105 110
Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys Ser Tyr Arg
115 120 125 Gln Ile Thr Glu
Ala Glu Arg Ala Gly Ser Thr Leu Pro Leu Gly Leu 130
135 140 Ala Thr Val Met Ser Lys His Met
Ser Ile Glu Gln Leu Arg Ala Met 145 150
155 160 Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr
Ile Asp Pro Leu 165 170
175 Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu Arg Ile Ala
180 185 190 His Phe Met
Ala Gln Ile Leu His Glu Thr Ala Cys Phe Lys Tyr Thr 195
200 205 Glu Glu Leu Ala Ser Gly Lys Ala
Tyr Glu Gly Arg Ala Asp Leu Gly 210 215
220 Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg
Gly Leu Leu 225 230 235
240 Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val Tyr Leu Arg
245 250 255 Glu Lys Leu Lys
Asp Pro Thr Phe Asp Ile Thr Ser Ser Val Thr Cys 260
265 270 Ala Gln Gln Leu Ser Glu Ser Pro Leu
Leu Ala Ala Leu Ala Ser Gly 275 280
285 Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr Ala
Asp Lys 290 295 300
Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr Ala Lys Gln 305
310 315 320 Ala Asn Pro Tyr Tyr
Pro Asn Arg Asp Lys Glu Pro Asn His Met Lys 325
330 335 Glu Arg Val Gln Met Leu Ala Val Thr Lys
Lys Ala His Gly Ile Val 340 345
350 Lys Gly His His His His His His 355
360 84358PRTunknownLycotoxin-OBPgLys 84Met Gly Ser Ile Trp Leu Thr Ala
Leu Lys Phe Leu Gly Lys His Ala 1 5 10
15 Ala Lys Lys Leu Ala Lys Gln Gln Leu Ser Lys Leu Gly
Ser Ser Lys 20 25 30
Asn Ser Glu Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu
35 40 45 Ala Ser Leu Ser
Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu 50
55 60 Lys Cys Arg Gly Ala Ile Ile Leu
Met Leu Asn Lys Val Tyr Pro Asn 65 70
75 80 Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu
Ala Glu Ser Val 85 90
95 Phe Thr Phe Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile
100 105 110 Thr Ile Asp
Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala 115
120 125 Leu Val Lys Ser Tyr Arg Gln Ile
Thr Glu Ala Glu Arg Ala Gly Ser 130 135
140 Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys His
Met Ser Ile 145 150 155
160 Glu Gln Leu Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu
165 170 175 Val Tyr Ile Asp
Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn 180
185 190 Thr Pro Leu Arg Ile Ala His Phe Met
Ala Gln Ile Leu His Glu Thr 195 200
205 Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala
Tyr Glu 210 215 220
Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe 225
230 235 240 Lys Gly Arg Gly Leu
Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys 245
250 255 Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys
Asp Pro Thr Phe Asp Ile 260 265
270 Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu
Leu 275 280 285 Ala
Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu 290
295 300 Asn Glu Thr Ala Asp Lys
Asp Asp Ile Tyr Trp Val Ser Val Tyr Val 305 310
315 320 Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr
Pro Asn Arg Asp Lys 325 330
335 Glu Pro Asn His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys
340 345 350 Lys Ala
His Gly Ile Val 355 85366PRTunknownLycotoxin-OBPgLys
with additional His-tag 85Met Gly Ser Ile Trp Leu Thr Ala Leu Lys Phe Leu
Gly Lys His Ala 1 5 10
15 Ala Lys Lys Leu Ala Lys Gln Gln Leu Ser Lys Leu Gly Ser Ser Lys
20 25 30 Asn Ser Glu
Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu 35
40 45 Ala Ser Leu Ser Leu Tyr Gly Gly
Arg Ile Asp Gly Leu Phe Gly Glu 50 55
60 Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val
Tyr Pro Asn 65 70 75
80 Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
85 90 95 Phe Thr Phe Leu
Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile 100
105 110 Thr Ile Asp Gly Lys Trp Gly Gly Thr
Ser Gln Gly Ala Ile Asp Ala 115 120
125 Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala
Gly Ser 130 135 140
Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys His Met Ser Ile 145
150 155 160 Glu Gln Leu Arg Ala
Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu 165
170 175 Val Tyr Ile Asp Pro Leu Asn Glu Thr Met
Asp Ile Phe Glu Ile Asn 180 185
190 Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile Leu His Glu
Thr 195 200 205 Ala
Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu 210
215 220 Gly Arg Ala Asp Leu Gly
Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe 225 230
235 240 Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg
Leu Asn Tyr Val Lys 245 250
255 Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe Asp Ile
260 265 270 Thr Ser
Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu 275
280 285 Ala Ala Leu Ala Ser Gly Tyr
Phe Trp Arg Phe Ile Lys Pro Lys Leu 290 295
300 Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val
Ser Val Tyr Val 305 310 315
320 Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp Lys
325 330 335 Glu Pro Asn
His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys 340
345 350 Lys Ala His Gly Ile Val Lys Gly
His His His His His His 355 360
365 86328PRTunknownOBPgpLYS 86Met Lys Asn Ser Glu Lys Asn Ala Ser Ile
Ile Met Ser Ile Gln Arg 1 5 10
15 Thr Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu
Phe 20 25 30 Gly
Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr 35
40 45 Pro Asn Phe Ser Thr Asn
Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu 50 55
60 Ser Val Phe Thr Phe Leu Gln Thr Ala Leu Ala
Gly Val Gly Leu Tyr 65 70 75
80 Thr Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile
85 90 95 Asp Ala
Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala 100
105 110 Gly Ser Thr Leu Pro Leu Gly
Leu Ala Thr Val Met Ser Lys His Met 115 120
125 Ser Ile Glu Gln Leu Arg Ala Met Leu Pro Thr Asp
Arg Gln Gly Tyr 130 135 140
Ala Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu 145
150 155 160 Ile Asn Thr
Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile Leu His 165
170 175 Glu Thr Ala Cys Phe Lys Tyr Thr
Glu Glu Leu Ala Ser Gly Lys Ala 180 185
190 Tyr Glu Gly Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly
Asp Gly Pro 195 200 205
Leu Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr 210
215 220 Val Lys Cys Gln
Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe 225 230
235 240 Asp Ile Thr Ser Ser Val Thr Cys Ala
Gln Gln Leu Ser Glu Ser Pro 245 250
255 Leu Leu Ala Ala Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile
Lys Pro 260 265 270
Lys Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val
275 280 285 Tyr Val Asn Gly
Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg 290
295 300 Asp Lys Glu Pro Asn His Met Lys
Glu Arg Val Gln Met Leu Ala Val 305 310
315 320 Thr Lys Lys Ala His Gly Ile Val
325 87327PRTunknownOBPgpLYS 87Lys Asn Ser Glu Lys Asn Ala Ser
Ile Ile Met Ser Ile Gln Arg Thr 1 5 10
15 Leu Ala Ser Leu Ser Leu Tyr Gly Gly Arg Ile Asp Gly
Leu Phe Gly 20 25 30
Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn Lys Val Tyr Pro
35 40 45 Asn Phe Ser Thr
Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser 50
55 60 Val Phe Thr Phe Leu Gln Thr Ala
Leu Ala Gly Val Gly Leu Tyr Thr 65 70
75 80 Ile Thr Ile Asp Gly Lys Trp Gly Gly Thr Ser Gln
Gly Ala Ile Asp 85 90
95 Ala Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu Arg Ala Gly
100 105 110 Ser Thr Leu
Pro Leu Gly Leu Ala Thr Val Met Ser Lys His Met Ser 115
120 125 Ile Glu Gln Leu Arg Ala Met Leu
Pro Thr Asp Arg Gln Gly Tyr Ala 130 135
140 Glu Val Tyr Ile Asp Pro Leu Asn Glu Thr Met Asp Ile
Phe Glu Ile 145 150 155
160 Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala Gln Ile Leu His Glu
165 170 175 Thr Ala Cys Phe
Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr 180
185 190 Glu Gly Arg Ala Asp Leu Gly Asn Thr
Arg Pro Gly Asp Gly Pro Leu 195 200
205 Phe Lys Gly Arg Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn
Tyr Val 210 215 220
Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe Asp 225
230 235 240 Ile Thr Ser Ser Val
Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu 245
250 255 Leu Ala Ala Leu Ala Ser Gly Tyr Phe Trp
Arg Phe Ile Lys Pro Lys 260 265
270 Leu Asn Glu Thr Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val
Tyr 275 280 285 Val
Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp 290
295 300 Lys Glu Pro Asn His Met
Lys Glu Arg Val Gln Met Leu Ala Val Thr 305 310
315 320 Lys Lys Ala His Gly Ile Val
325 88336PRTunknownOBPgpLYS derivative with His-tag 88Met Lys Asn
Ser Glu Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg 1 5
10 15 Thr Leu Ala Ser Leu Ser Leu Tyr
Gly Gly Arg Ile Asp Gly Leu Phe 20 25
30 Gly Glu Lys Cys Arg Gly Ala Ile Ile Leu Met Leu Asn
Lys Val Tyr 35 40 45
Pro Asn Phe Ser Thr Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu 50
55 60 Ser Val Phe Thr
Phe Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr 65 70
75 80 Thr Ile Thr Ile Asp Gly Lys Trp Gly
Gly Thr Ser Gln Gly Ala Ile 85 90
95 Asp Ala Leu Val Lys Ser Tyr Arg Gln Ile Thr Glu Ala Glu
Arg Ala 100 105 110
Gly Ser Thr Leu Pro Leu Gly Leu Ala Thr Val Met Ser Lys His Met
115 120 125 Ser Ile Glu Gln
Leu Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr 130
135 140 Ala Glu Val Tyr Ile Asp Pro Leu
Asn Glu Thr Met Asp Ile Phe Glu 145 150
155 160 Ile Asn Thr Pro Leu Arg Ile Ala His Phe Met Ala
Gln Ile Leu His 165 170
175 Glu Thr Ala Cys Phe Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala
180 185 190 Tyr Glu Gly
Arg Ala Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro 195
200 205 Leu Phe Lys Gly Arg Gly Leu Leu
Gln Ile Thr Gly Arg Leu Asn Tyr 210 215
220 Val Lys Cys Gln Val Tyr Leu Arg Glu Lys Leu Lys Asp
Pro Thr Phe 225 230 235
240 Asp Ile Thr Ser Ser Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro
245 250 255 Leu Leu Ala Ala
Leu Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro 260
265 270 Lys Leu Asn Glu Thr Ala Asp Lys Asp
Asp Ile Tyr Trp Val Ser Val 275 280
285 Tyr Val Asn Gly Tyr Ala Lys Gln Ala Asn Pro Tyr Tyr Pro
Asn Arg 290 295 300
Asp Lys Glu Pro Asn His Met Lys Glu Arg Val Gln Met Leu Ala Val 305
310 315 320 Thr Lys Lys Ala His
Gly Ile Val Lys Gly His His His His His His 325
330 335 891011DNAunknownOBPgpLYS derivative
with additional His-tag 89atgaaaaata gcgagaagaa tgcatcgata attatgtcga
tacagagaac gctcgcttca 60ctctcactct atggaggccg catcgacggc ctctttggag
agaagtgtcg tggggctatc 120atcttgatgc tgaataaggt ctatcctaat ttcagcacca
acaaacttcc gagtaacaca 180tatgaagcgg aatccgtgtt cacgtttctc cagactgctt
tggctggtgt tggtctttat 240accattacta ttgatggtaa atggggtggt acttctcaag
gtgctattga cgccctcgtc 300aagtcttacc gtcaaattac cgaagcggag cgagctgggt
cgacgttgcc attaggtctt 360gctactgtga tgtctaagca tatgtctatt gaacagttga
gagcaatgct ccctaccgat 420agacaaggat atgctgaagt ttatatcgat cctttaaatg
agacgatgga tatatttgaa 480ataaatactc cattacgaat tgctcatttc atggcccaaa
tcctccacga aacggcgtgt 540tttaaatata ccgaagaact ggcgagcggt aaggcttatg
agggtcgtgc tgatttaggt 600aatactcgac caggtgatgg accactgttt aaaggtcgtg
gattattaca aattaccggg 660cgactgaatt atgtgaaatg ccaagtgtat ttgagagaga
agttaaagga ccctactttc 720gacattacgt cgtctgtaac ttgtgcccaa cagctctccg
aaagtccact tcttgctgca 780ttggcatcgg gctacttctg gagattcatc aaacctaaac
tcaatgaaac ggctgataaa 840gacgatatct attgggtttc tgtttatgtc aatggttacg
ctaaacaagc gaatccttat 900taccctaacc gggataagga acccaaccat atgaaagaac
gtgtccaaat gcttgcagtg 960acaaagaaag cacacggaat agttaagggt catcatcacc
atcaccattg a 10119072DNAunknownantimicrobial peptide ascaphine
90ggtatcaaag attggatcaa aggcgcagcg aaaaaactga tcaaaaccgt tgcctctcac
60attgctaacc ag
729151DNAunknownantimicrobial peptide apidaecine 91gcgaaccgtc cggtctacat
cccaccgcca cgtccaccgc acccacgtct g
5192117DNAunknownantimicrobial peptide Sarcotoxin IA 92ggatggctca
aaaagattgg caagaaaatc gagcgagtcg gtcagcatac gcgtgatgca 60actatccagg
gtttaggtat cgcacagcaa gcagctaatg tagcagctac tgctcgg
1179387DNAunknownantimicrobial peptide SMAP-29 93cgtggtctgc gtcgcctggg
tcgcaaaatt gcgcacggcg tcaaaaaata cggcccgacc 60gtgctgcgca ttatccgcat
cgctggt
8794120DNAunknownantimicrobial peptide Cecropin A (A.aegypti)
94ggctggctga aaaaaattgg caaaaaaatc gaacgcgtgg gccagcacac gcgtgatgca
60accatccagg gtctgggtat cccacagcag gcagctaacg tagccgcgac tgctcgtggt
1209539DNAunknownantimicrobial peptide Alpha 4 95ccgaaccgtg caaaacgtgt
aatcaccacc ttccgtacc 399615DNAunknownsynthetic
peptide 96ttcttcgtag caccg
159754DNAunknownantimicropial peptide Artilysin1 97ggcttcttca
tcccggcagt aatcctgccc tccatcgcat tcctgatcgt accg
549875DNAunknownantimicropial peptide Artilysin2 98ggcaaaccgg gctggctgat
caaaaaggca ctggtattca agaaactgat ccgtcgtccg 60ctgaagagac tggca
759957DNAunknownantimicrobial peptide Parasin 1 99aaaggccgtg gcaagcaggg
aggcaaagta cgtgcaaaag caaagacccg ttcctca
5710075DNAunknownantimicrobial peptide Lycotoxin 100atctggctga ccgcactgaa
attcctcggc aaacacgccg caaagaaact ggcaaaacag 60caattatcca aactg
75101984DNAunknownOBPgpLYS
101atgaaaaata gcgagaagaa tgcatcgata attatgtcga tacagagaac gctcgcttca
60ctctcactct atggaggccg catcgacggc ctctttggag agaagtgtcg tggggctatc
120atcttgatgc tgaataaggt ctatcctaat ttcagcacca acaaacttcc gagtaacaca
180tatgaagcgg aatccgtgtt cacgtttctc cagactgctt tggctggtgt tggtctttat
240accattacta ttgatggtaa atggggtggt acttctcaag gtgctattga cgccctcgtc
300aagtcttacc gtcaaattac cgaagcggag cgagctgggt cgacgttgcc attaggtctt
360gctactgtga tgtctaagca tatgtctatt gaacagttga gagcaatgct ccctaccgat
420agacaaggat atgctgaagt ttatatcgat cctttaaatg agacgatgga tatatttgaa
480ataaatactc cattacgaat tgctcatttc atggcccaaa tcctccacga aacggcgtgt
540tttaaatata ccgaagaact ggcgagcggt aaggcttatg agggtcgtgc tgatttaggt
600aatactcgac caggtgatgg accactgttt aaaggtcgtg gattattaca aattaccggg
660cgactgaatt atgtgaaatg ccaagtgtat ttgagagaga agttaaagga ccctactttc
720gacattacgt cgtctgtaac ttgtgcccaa cagctctccg aaagtccact tcttgctgca
780ttggcatcgg gctacttctg gagattcatc aaacctaaac tcaatgaaac ggctgataaa
840gacgatatct attgggtttc tgtttatgtc aatggttacg ctaaacaagc gaatccttat
900taccctaacc gggataagga acccaaccat atgaaagaac gtgtccaaat gcttgcagtg
960acaaagaaag cacacggaat agtt
98410233DNAArtificial Sequenceforward primer 102ggaatgggga gctcctccaa
aaatagcgag aag 3310324DNAArtificial
Sequencereverse primer 103aactattccg tgtgctttct ttgt
2410448DNAArtificial Sequenceextended forward
primer 104atgggatcct tcttcgtagc accgggctcc tccaaaaata gcgagaag
4810539DNAArtificial sequenceforward primer alpha4 105ttggaatggg
gagcccgaac cgtgcaaaac gtgtaatca
3910642DNAArtificial Sequencereverse primer alpha4 106tatttttgga
ggagccggta cggaaggtgg tgattacacg tt
4210739DNAArtificial Sequenceforward primer artilys1 107ttatgggctt
cttcatcccg gcagtaatcc tgccctcca
3910853DNAArtificial Sequencereverse primer artilys1 108tatttttgga
tctgccgccc ggtacgatca ggaatgcgat ggagggcagg att
5310947DNAArtificial Sequenceforward primer artilys2 109ttatgggcaa
accgggctgg ctgatcaaaa ggcactggta ttcaaga
4711064DNAArtificial Sequencerevers primer artilys2 110tatttttgga
tctgccgcct gccagtctct tcagcggacg acggatcagt ttcttgaata 60ccag
6411148DNAArtificial Sequenceforward primer Parasin1 111ttggaatggg
gagcaaaggc cgtggcaagc agggaggcaa agtacgtg
4811251DNAArtificial Sequencereverse primer Parasin1 112tatttttgga
ggagcctgag gaacgggtct ttgcttttgc acgtactttg c
5111355DNAArtificial Sequenceforward primer Lycotoxin 113ggaatgggga
gcatctggct gaccgcactg aaattcctcg gcaaacacgc cgcaa
5511460DNAArtificial Sequencereverse primer Lycotoxin 114tatttttgga
ggagcccagt ttggataatt gctgttttgc cagtttcttt gcggcgtgtt
60115339PRTunknownPKOBPgpLYS derivative 115Met Gly Ser Lys Arg Lys Lys
Arg Lys Lys Arg Lys Lys Asn Ser Glu 1 5
10 15 Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg
Thr Leu Ala Ser Leu 20 25
30 Ser Leu Tyr Gly Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys
Arg 35 40 45 Gly
Ala Ile Ile Leu Met Leu Asn Lys Val Tyr Pro Asn Phe Ser Thr 50
55 60 Asn Lys Leu Pro Ser Asn
Thr Tyr Glu Ala Glu Ser Val Phe Thr Phe 65 70
75 80 Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr
Thr Ile Thr Ile Asp 85 90
95 Gly Lys Trp Gly Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys
100 105 110 Ser Tyr
Arg Gln Ile Thr Glu Ala Glu Arg Ala Gly Ser Thr Leu Pro 115
120 125 Leu Gly Leu Ala Thr Val Met
Ser Lys His Met Ser Ile Glu Gln Leu 130 135
140 Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala
Glu Val Tyr Ile 145 150 155
160 Asp Pro Leu Asn Glu Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu
165 170 175 Arg Ile Ala
His Phe Met Ala Gln Ile Leu His Glu Thr Ala Cys Phe 180
185 190 Lys Tyr Thr Glu Glu Leu Ala Ser
Gly Lys Ala Tyr Glu Gly Arg Ala 195 200
205 Asp Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe
Lys Gly Arg 210 215 220
Gly Leu Leu Gln Ile Thr Gly Arg Leu Asn Tyr Val Lys Cys Gln Val 225
230 235 240 Tyr Leu Arg Glu
Lys Leu Lys Asp Pro Thr Phe Asp Ile Thr Ser Ser 245
250 255 Val Thr Cys Ala Gln Gln Leu Ser Glu
Ser Pro Leu Leu Ala Ala Leu 260 265
270 Ala Ser Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn
Glu Thr 275 280 285
Ala Asp Lys Asp Asp Ile Tyr Trp Val Ser Val Tyr Val Asn Gly Tyr 290
295 300 Ala Lys Gln Ala Asn
Pro Tyr Tyr Pro Asn Arg Asp Lys Glu Pro Asn 305 310
315 320 His Met Lys Glu Arg Val Gln Met Leu Ala
Val Thr Lys Lys Ala His 325 330
335 Gly Ile Val 116347PRTunknownPKOBPgpLYS derivative with
additional His-tag 116Met Gly Ser Lys Arg Lys Lys Arg Lys Lys Arg Lys Lys
Asn Ser Glu 1 5 10 15
Lys Asn Ala Ser Ile Ile Met Ser Ile Gln Arg Thr Leu Ala Ser Leu
20 25 30 Ser Leu Tyr Gly
Gly Arg Ile Asp Gly Leu Phe Gly Glu Lys Cys Arg 35
40 45 Gly Ala Ile Ile Leu Met Leu Asn Lys
Val Tyr Pro Asn Phe Ser Thr 50 55
60 Asn Lys Leu Pro Ser Asn Thr Tyr Glu Ala Glu Ser Val
Phe Thr Phe 65 70 75
80 Leu Gln Thr Ala Leu Ala Gly Val Gly Leu Tyr Thr Ile Thr Ile Asp
85 90 95 Gly Lys Trp Gly
Gly Thr Ser Gln Gly Ala Ile Asp Ala Leu Val Lys 100
105 110 Ser Tyr Arg Gln Ile Thr Glu Ala Glu
Arg Ala Gly Ser Thr Leu Pro 115 120
125 Leu Gly Leu Ala Thr Val Met Ser Lys His Met Ser Ile Glu
Gln Leu 130 135 140
Arg Ala Met Leu Pro Thr Asp Arg Gln Gly Tyr Ala Glu Val Tyr Ile 145
150 155 160 Asp Pro Leu Asn Glu
Thr Met Asp Ile Phe Glu Ile Asn Thr Pro Leu 165
170 175 Arg Ile Ala His Phe Met Ala Gln Ile Leu
His Glu Thr Ala Cys Phe 180 185
190 Lys Tyr Thr Glu Glu Leu Ala Ser Gly Lys Ala Tyr Glu Gly Arg
Ala 195 200 205 Asp
Leu Gly Asn Thr Arg Pro Gly Asp Gly Pro Leu Phe Lys Gly Arg 210
215 220 Gly Leu Leu Gln Ile Thr
Gly Arg Leu Asn Tyr Val Lys Cys Gln Val 225 230
235 240 Tyr Leu Arg Glu Lys Leu Lys Asp Pro Thr Phe
Asp Ile Thr Ser Ser 245 250
255 Val Thr Cys Ala Gln Gln Leu Ser Glu Ser Pro Leu Leu Ala Ala Leu
260 265 270 Ala Ser
Gly Tyr Phe Trp Arg Phe Ile Lys Pro Lys Leu Asn Glu Thr 275
280 285 Ala Asp Lys Asp Asp Ile Tyr
Trp Val Ser Val Tyr Val Asn Gly Tyr 290 295
300 Ala Lys Gln Ala Asn Pro Tyr Tyr Pro Asn Arg Asp
Lys Glu Pro Asn 305 310 315
320 His Met Lys Glu Arg Val Gln Met Leu Ala Val Thr Lys Lys Ala His
325 330 335 Gly Ile Val
Lys Gly His His His His His His 340 345
11718PRTunknownantimicrobial peptide Ranalexin 117Phe Leu Gly Gly Leu
Ile Val Pro Ala Met Ile Cys Ala Val Thr Lys 1 5
10 15 Lys Cys 11827PRTunknownpeptide stretch
WLBU2 variant 118Lys Arg Trp Val Lys Arg Val Lys Arg Val Lys Arg Trp Val
Lys Arg 1 5 10 15
Val Val Arg Val Val Lys Arg Trp Val Lys Arg 20
25 11926PRTunknownantimicrobial peptide Melittin 119Gly Ile
Gly Ala Val Leu Lys Val Leu Thr Thr Gly Leu Pro Ala Leu 1 5
10 15 Ile Ser Trp Ile Lys Arg Lys
Arg Gln Gln 20 25
User Contributions:
Comment about this patent or add new information about this topic: