Patent application title: Self-containing lactococcus strain
Inventors:
Lothar Steidler (Bandon, IE)
IPC8 Class: AA61K3574FI
USPC Class:
424 932
Class name: Drug, bio-affecting and body treating compositions whole live micro-organism, cell, or virus containing genetically modified micro-organism, cell, or virus (e.g., transformed, fused, hybrid, etc.)
Publication date: 2010-12-16
Patent application number: 20100316611
Claims:
1-20. (canceled)
21. An isolated thymidylate synthase (thyA) mutant of Lactococcus species comprising an inactive thymidylate synthase gene and a gene or expression unit encoding a heterologous prophylactic and/or therapeutic molecule.
22. The isolated thyA mutant of Lactococcus species according to claim 21, wherein the inactive thymidylate synthase gene has been inactivated by gene disruption.
23. The isolated thyA mutant of Lactococcus species according to claim 22, wherein the inactive thymidylate synthase gene has been disrupted by the gene or expression unit encoding the heterologous prophylactic and/or therapeutic molecule.
24. The isolated thyA mutant of Lactococcus species according to claim 21, wherein said Lactococcus species is Lactococcus lactis.
25. The isolated thyA mutant of Lactococcus species according to claim 21, wherein said isolated thyA mutant is transformed with a transforming plasmid, wherein said transforming plasmid does not comprise an intact thymidylate synthase gene.
26. The isolated thyA mutant of Lactococcus species according to claim 21, wherein the heterologous prophylactic and/or therapeutic molecule is interleukin-10.
27. A pharmaceutical composition comprising an isolated thymidylate synthase (thyA) mutant of Lactococcus species, said isolated thyA mutant comprising an inactive thymidylate synthase gene and a gene or expression unit encoding a heterologous prophylactic and/or therapeutic molecule.
28. The pharmaceutical composition according to claim 27, wherein the inactive thymidylate synthase gene has been inactivated by gene disruption.
29. The pharmaceutical composition according to claim 28, wherein the inactive thymidylate synthase gene has been disrupted by the gene or expression unit encoding the heterologous prophylactic and/or therapeutic molecule.
30. The pharmaceutical composition according to claim 27, wherein said Lactococcus species is Lactococcus lactis.
31. The pharmaceutical composition according to claim 27, wherein said isolated thyA mutant is transformed with a transforming plasmid, wherein said transforming plasmid does not comprise an intact thymidylate synthase gene.
32. The pharmaceutical composition according to claim 27, wherein the heterologous prophylactic and/or therapeutic molecule is interleukin-10.
33. A method for delivering a prophylactic and/or therapeutic molecule to a subject, the method comprising administering to the subject an isolated thymidylate synthase (thyA) mutant of Lactococcus species comprising an inactive thymidylate synthase gene and a gene or expression unit encoding the heterologous prophylactic and/or therapeutic molecule.
34. The method according to claim 33, wherein the inactive thymidylate synthase gene has been inactivated by gene disruption.
35. The method according to claim 34, wherein the inactive thymidylate synthase gene has been disrupted by the gene or expression unit encoding the heterologous prophylactic and/or therapeutic molecule.
36. The method according to claim 33, wherein said Lactococcus species is Lactococcus lactis.
37. The method according to claim 33, wherein said isolated thyA mutant is transformed with a transforming plasmid, wherein said transforming plasmid does not comprise an intact thymidylate synthase gene.
38. The method according to claim 33, wherein the heterologous prophylactic and/or therapeutic molecule is interleukin-10.
39. A method for treating inflammatory bowel disease in a subject, the method comprising administering to the subject an isolated thymidylate synthase (thyA) mutant of Lactococcus species comprising an inactive thymidylate synthase gene and a gene or expression unit encoding the heterologous prophylactic and/or therapeutic molecule.
40. The method according to claim 39, wherein the inactive thymidylate synthase gene has been inactivated by gene disruption.
41. The method according to claim 40, wherein the inactive thymidylate synthase gene has been disrupted by the gene or expression unit encoding the heterologous prophylactic and/or therapeutic molecule.
42. The method according to claim 39, wherein said Lactococcus species is Lactococcus lactis.
43. The method according to claim 39, wherein said isolated thyA mutant is transformed with a transforming plasmid, wherein said transforming plasmid does not comprise an intact thymidylate synthase gene.
44. The method according to claim 39, wherein the heterologous prophylactic and/or therapeutic molecule is interleukin-10.
Description:
CROSS-REFERENCE TO RELATED APPLICATION
[0001]This application is a continuation of U.S. patent application Ser. No. 10/687,996, filed Oct. 17, 2003, pending, which is a continuation of PCT International Patent Application No. PCT/EP02/04942, filed on May 3, 2002, designating the United States of America, and published, in English, as PCT International Publication No. WO 02/090551 A2 on Nov. 14, 2002, the contents of the entirety of which are incorporated herein by this reference.
TECHNICAL FIELD
[0002]The invention relates to a recombinant Lactococcus strain, with environmentally limited growth and viability. More particularly, it relates to a recombinant Lactococcus that can only survive in a medium, where well-defined medium compounds are present. A preferred embodiment is a Lactococcus that may only survive in a host organism, where the medium compounds are present, but cannot survive outside the host organism in an absence of the medium compounds. Moreover, the Lactococcus can be transformed with prophylactic and/or therapeutic molecules and can, as such, be used to treat diseases such as inflammatory bowel diseases.
BACKGROUND
[0003]Lactic acid bacteria have long been used in a wide variety of industrial fermentation processes. They have generally-regarded-as-safe ("GRAS") status, making them potentially useful organisms for the production of commercially important proteins. Indeed, several heterologous proteins, such as Interleukin-2, have been successfully produced in Lactococcus spp (Steidler et al., 1995). It is, however, undesirable that such genetically modified microorganisms survive and spread into the environment.
[0004]To avoid unintentional release of genetically modified microorganisms, special guidelines for safe handling and technical requirements for physical containment are used. Although this may be useful in industrial fermentations, the physical containment is generally considered as insufficient, and additional biological containment measures are taken to reduce the possibility of survival of the genetically modified microorganism in the environment.
[0005]Biological containment is extremely important in cases where physical containment is difficult or even inapplicable. This is, amongst others, the case in applications where genetically modified microorganisms are used as live vaccines or as a vehicle for delivery of therapeutic compounds. Such applications have been described, for example, in PCT International Publication Number WO 97/14806, which discloses the delivery of biologically active peptides, such as cytokines, to a subject by recombinant noninvasive or nonpathogenic bacteria. Further, PCT International Publication Number WO 96/11277 describes the delivery of therapeutic compounds to an animal or human by administering a recombinant bacterium encoding a therapeutic protein. Steidler et al. (2000) describe the treatment of colitis by administration of a recombinant Lactococcus lactis secreting Interleukin-10. Such a delivery may indeed be extremely useful to treat a disease in an affected human or animal, but the recombinant bacterium may act as a harmful and pathogenic microorganism when it enters a nonaffected subject, and an efficient biological containment that avoids such unintentional spreading of the microorganism is needed.
[0006]Biological containment systems for host organisms may be passive and based on a strict requirement of the host for a specific growth factor or a nutrient that is not present or is present in low concentrations in the outside environment. Alternatively, it may be active and, based on so-called suicidal genetic elements in the host, wherein the host is killed in the outside environment by a cell-killing function, encoded by a gene that is under the control of a promoter only being expressed under specific environmental conditions.
[0007]Passive biological containment systems are well known in microorganisms such as Escherichia coli or Saccharomyces cerevisiae. Such E. coli strains are disclosed, for example, in U.S. Pat. No. 4,190,495. Also, PCT International Publication Number WO 95/10621 discloses lactic acid bacterial suppressor mutants and their use as means of containment in lactic acid bacteria, but in that case, the containment is on the plasmid level, rather than on the level of the host strain and it stabilizes the plasmid in the host strain, but does not provide containment for the genetically modified host strain itself.
[0008]Active suicidal systems have been described by several authors. Such systems consist of two elements: a lethal gene and a control sequence that switches on the expression of the lethal gene under nonpermissive conditions. For example, PCT International Publication Number WO 95/10614 discloses the use of a cytoplasmatically active truncated and/or mutated Staphylococcus aureus nuclease as a lethal gene. PCT International Publication Number WO 96/40947 discloses a recombinant bacterial system with environmentally limited viability, based on the expression of either an essential gene, expressed when the cell is in the permissive environment and not expressed or temporarily expressed when the cell is in the nonpermissive environment, and/or a lethal gene, wherein expression of the gene is lethal to the cell and the lethal gene is expressed when the cell is in the nonpermissive environment but not when the cell is in the permissive environment. PCT International Publication Number WO 99/58652 describes a biological containment system based on the relE cytotoxin. However, most systems have been elaborated for Escherichia coli (Tedkin et al., 1995; Knudsen et al., 1995; Schweder et al., 1995) or for Pseudomonas (Kaplan et al., 1999; Molino et al., 1998). Although several of the containment systems theoretically can by applied to lactic acid bacteria, no specific biological containment system for Lactococcus has been described that allows the usage of a self-containing and transformed Lactococcus to deliver prophylactic and/or therapeutic molecules in order to prevent and/or treat diseases.
DISCLOSURE OF THE INVENTION
[0009]The invention includes a suitable biological containment system for Lactococcus. A first aspect of the invention is an isolated strain of Lactococcus sp. comprising a defective thymidylate synthase gene.
[0010]Another aspect of the invention is the use of a strain according to the invention as a host strain for transformation, wherein the transforming plasmid does not comprise an intact thymidylate synthase gene.
[0011]Still another aspect of the invention is a transformed strain of Lactococcus sp. according to the invention, comprising a plasmid that does not comprise an intact thymidylate synthase gene. Another aspect of the invention relates to a transformed strain of Lactococcus sp. comprising a gene or expression unit encoding a prophylactic and/or therapeutic molecule such as Interleukin-10. Consequently, the present invention also relates to the usage of a transformed strain of Lactococcus sp. to deliver prophylactic and/or therapeutic molecules and, as such, to treat diseases. Methods to deliver the molecules and methods to treat diseases such as inflammatory bowel diseases are explained in detail in PCT International Publication Numbers WO 97/14806 and WO 00/23471 to Steidler et al. and in Steidler et al. (Science 2000, 289: 1352), the contents of all of which are incorporated herein by this reference.
[0012]Another aspect of the invention is a medical preparation comprising a transformed strain of Lactococcus sp., according to the invention.
[0013]The invention further demonstrates that the transformed strains surprisingly pass the gut at the same speed as the control strains, showing that their loss of viability indeed is not different from that of the control strains. However, once the strain is secreted in the environment, for example, in the feces, it is not able to survive any longer.
[0014]The transforming plasmid can be any plasmid, as long as it does not complement the thyA mutation. It may be a self-replicating plasmid that preferably carries one or more genes of interest and one or more resistance markers, or it may be an integrative plasmid. In the latter case, the integrative plasmid itself may be used to create the mutation by causing integration at the thyA site, whereby the thyA gene is inactivated.
BRIEF DESCRIPTION OF THE FIGURES
[0015]FIG. 1: Map of the MG1363 thyA locus.
[0016]FIG. 2: Schematic representation of the different expression modules as present on pOThy plasmids ands genomic integrants of hIL-10. Black parts represent original L. lactis MG1363 genetic information; white parts represent recombinant genetic information.
[0017]FIGS. 3A and 3B: PCR identification of Thy11 (Thy11 1.1 and Thy11 7.1 represent individually obtained, identical clones). Standard PCR reactions were performed by using aliquots of saturated cultures of the indicated strains as a source of a DNA template. FIG. 3A shows an agarose gel of the products of the indicated PCR reactions. FIG. 3B shows the positions at which primers attach in the thyA (1), upstream (2) or downstream (3) PCR's. Oligonucleotide primers used:
TABLE-US-00001 (1): ATgACTTACgCAgATCAAgTTTTT (SEQ ID NO: 8 of the accompanying SEQUENCE LISTING, which is incorporated herein by this reference and (SEQ ID NO: 9) TTAAATTgCTAAATCAAATTTCAATTg (2): (SEQ ID NO: 10) TCTgATTgAgTACCTTgACC and (SEQ ID NO: 11) gCAATCATAATTggTTTTATTg (3): (SEQ ID NO: 12) CTTACATgACTATgAAAATCCg and (SEQ ID NO: 13) cTTTTTTATTATTAgggAAAgCA.
[0018]FIGS. 4A and 4B: PCR identification of Thy11, Thy12, Thy15 and Thy16. Standard PCR reactions were performed by using three-day old colonies of the indicated strains as a source of DNA template. FIG. 4A shows the positions at which primers attach in the upstream (1), downstream (2) or thyA (3), PCRs. Oligonucleotide primers used:
TABLE-US-00002 (1): ATgACTTACgCAgATCAAgTTTTT (SEQ ID NO: 8) and TTAAATTgCTAAATCAAATTTCAATTg (SEQ ID NO: 9) (2): TCTgATTgAgTACCTTgACC (SEQ ID NO: 10) and gCAATCATAATTggTTTTATTg (SEQ ID NO: 11) (3): CTTACATgACTATgAAAATCCg (SEQ ID NO: 12) and cTTTTTTATTATTAgggAAAgCA. (SEQ ID NO: 13)
FIG. 4B shows an agarose gel of the products of the indicated PCR reactions.
[0019]FIGS. 5A and 5B: Southern blot analysis of the indicated strains. Chromosomal DNA was extracted and digested with the indicated restriction enzymes. Following agarose gel electrophoresis, the DNA was transferred to a membrane and the chromosome structure around the thyA locus was revealed by use of DIG-labeled thyA or hIL-10 DNA fragments (FIG. 5A). FIG. 5B shows a schematic overview of the predicted structure of the thyA locus in both MG1363 and Thy11.
[0020]FIG. 6A shows a schematic overview of part of the predicted structure of the L. lactis chromosome at the thyA locus in MG1363, Thy11, Thy12, Thy15 and Thy16. Numbers indicate base pairs. FIG. 6B illustrates a Southern blot analysis of the indicated strains. Chromosomal DNA was extracted and digested with NdeI and SpeI restriction enzymes. Following agarose gel electrophoresis, the DNA was transferred to a membrane and the chromosome structure around the thyA locus was revealed by use of DIG-labeled thyA or hIL-10 DNA fragments.
[0021]FIGS. 7A and 7B: Production of hIL-10. FIG. 7A shows a western blot revealed with anti-hIL-10 antiserum of culture supernatant and cell-associated proteins of the indicated strains. FIG. 7B shows quantification (by ELISA) of hIL-10 present in the culture supernatant.
[0022]FIGS. 8A and 8B: Production of hIL-10. FIG. 8A shows quantification (by ELISA) of hIL-10 present in the culture supernatant of the indicated strains. FIG. 8B shows a western blot revealed with anti-hIL-10 antiserum of culture supernatant proteins of the indicated strains.
[0023]FIG. 9: Production of hIL-10 by the L. lactis strains LL108 carrying pOThy11, pOThy12, or pOThy16. Quantification (by ELISA) of hIL-10 present in the culture supernatant of the indicated strains is shown. The N-terminal protein sequence of the recombinant hIL-10 was determined by Edman degradation and was shown to be identical to the structure as predicted for the mature, recombinant hIL-10. The protein showed full biological activity.
[0024]FIGS. 10A and 10B: Growth rate of the indicated strains in GM17 containing 100 μg/ml (T100), 50 μg/ml (T50), 25 μg/ml (T25), or no (T0) extra thymidine and possibly supplemented with 5 μg/ml of erythromycin (E). Saturated overnight cultures (prepared in T50) were diluted 1:100 in the indicated culture media. FIG. 10A shows the kinetics of absorbance accumulation. FIG. 10B shows the kinetics of the number of colony-forming units (cfu) per ml of culture.
[0025]FIG. 11: Growth rate of MG1363 and Thy12 in thymidine-free medium (TFM). TFM was prepared by growing L. lactis Thy12 bacteria in GM17, removing the bacteria by subsequent centrifugation and filtration on a 0.22 μm pore size filter, adjusting the pH to 7.0 and autoclaving. MG1363 and Thy12 bacteria were collected from an overnight culture in GM17 or GM17+50 μg/ml of thymidine, respectively, and washed in M9 buffer (6 Na2HPO4, 3 g/l KH2PO4, 1 g/l NH4Cl, 0.5 g/l NaCl in water). The suspensions of both were either diluted in TFM or TFM supplemented with 50 μg/ml of thymidine (T50). CFU counts were determined at different time points: t=0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 and 20 hours. This shows that Thy12 viability is severely impaired in the absence of thymidine.
[0026]FIG. 12: Intestinal passage and viability: L. lactis MG1363 was transformed with the plasmid pLET2N, which carries a chloramphenicol (Cm) resistance marker. L. lactis Thy12 was transformed with the plasmid pT1NX, which carries an erythromycin (Em) resistance marker. Of both strains, 109 bacteria were resuspended in BM9 (6 g/l Na2HPO4, 3 g/l KH2PO4, 1 g/l NH4Cl, 0.5 g/l NaCl in 25 mM NaHCO3+25 mM Na2CO3), mixed and inoculated in three mice at t=0h. Feces were collected at the time intervals -1 to 0, 0 to 1, 1 to 2, 2 to 3, 3 to 4, 4 to 5, 5 to 6, 6 to 7, 7 to 8, 8 to 9, 9 to 10 and 10 to overnight. All samples were resuspended in isotonic buffer and appropriate dilutions were plated on GM17 (M17 medium, Difco, St. Louis, Mo., supplemented with 0.5% glucose) plates containing either Cm, Em or Em+50 μg/ml thymidine. Colony-forming units for the different plates are represented in the graph.
DETAILED DESCRIPTION OF THE INVENTION
[0027]As previously identified, the invention includes a suitable biological containment system for Lactococcus. In one aspect, the invention is an isolated strain of Lactococcus sp. comprising a defective thymidylate synthase gene. Preferably, the defective thymidylate synthase gene is inactivated by gene disruption. Even more preferably, the Lactococcus sp. is Lactococcus lactis. A special embodiment is a Lactococcus sp. strain, preferably Lactococcus lactis, more preferably a Lactococcus lactis MG1363 derivative, wherein the thymidylate synthase gene has been disrupted and replaced by an Interleukin-10 expression unit. The Interleukin-10 expression unit is preferably, but not limited to, a human Interleukin-10 expression unit or gene encoding for human Interleukin-10.
[0028]The Lactococcus lactis subsp. lactis thymidylate synthase gene (thyA) has been cloned by Ross et al. (1990a). Its sequence is comprised in SEQ ID NO:3 and SEQ ID NO:5. European Patent Application Publication Number 0406003 discloses a vector devoid of antibiotic resistance and bearing a thymidylate synthase gene as a selection marker; the same vector has been described by Ross et al. (1990b). However, this vector could not be used in a Lactococcus lactis strain due to the lack of a suitable thyA mutant that has never been described. The present invention discloses how to construct such a mutant by gene disruption using homologous recombination in Lactococcus. In a preferred embodiment, the thyA gene is disrupted by a functional human Interleukin-10 expression cassette. However, it is clear that any construct can be used for gene disruption, as long as it results in an inactivation of the thyA gene or in an inactive thymidylate synthase. As a nonlimiting example, the homologous recombination may result in a deletion of the gene, in one or more amino acid substitutions that lead to an inactive form of the thymidylate synthase, or in a frame shift mutation resulting in a truncated form of the protein.
[0029]Such a Lactococcus sp. thyA mutant is very useful as a host strain for transformation in situations where more severe containment than purely physical containment is needed. Indeed, thyA mutants cannot survive in an environment without or with only a limited concentration of thymidine and/or thymine. When such a strain is transformed with a plasmid that does not comprise an intact thyA gene and cannot complement the mutation, the transformed strain will become suicidal in a thymidine/thymine-poor environment. Such a strain can be used in a fermentor as an additional protection for the physical containment. Moreover, the present invention discloses that such a strain is especially useful in cases where the strain is used as a delivery vehicle in an animal body. Indeed, when such a transformed strain is given, for example, orally to an animal--including humans--it survives in the gut, provided that a sufficiently high concentration of thymidine/thymine is present, and produces homologous and/or heterologous proteins, such as human Interleukin-10, that may be beneficial for the animal.
[0030]The invention further demonstrates that the transformed strains surprisingly pass the gut at the same speed as the control strains, showing that their loss of viability indeed is not different from that of the control strains. However, once the strain is secreted in the environment, for example, in the feces, it is not able to survive any longer.
[0031]The transforming plasmid can be any plasmid, as long as it does not complement the thyA mutation. It may be a self-replicating plasmid that preferably carries one or more genes of interest and one or more resistance markers, or it may be an integrative plasmid. In the latter case, the integrative plasmid itself may be used to create the mutation by causing integration at the thyA site, whereby the thyA gene is inactivated. Preferably, the active thyA gene is replaced by double homologous recombination by a cassette comprising the gene or genes of interest, flanked by targeting sequences that target the insertion to the thyA target site. It is of extreme importance that these sequences are sufficiently long and sufficiently homologous to integrate the sequence into the target site. Preferably, the targeting sequences include at least 100 contiguous nucleotides of SEQ ID NO:1 at one side of the gene of interest and at least 100 contiguous nucleotides of SEQ ID NO:2 at the other side. More preferably, the targeting sequences consist of at least 500 contiguous nucleotides of SEQ ID NO:1 at one side of the gene of interest and at least 500 contiguous nucleotides of SEQ ID NO:2 at the other side. Most preferably, the targeting sequences consist of SEQ ID NO:1 at one side of the gene of interest and SEQ ID NO:2 at the other side, or the targeting sequences consist of at least 100 nucleotides that are at least 80% identical, preferably 90% identical to a region of SEQ ID NO:1 at one side of the gene of interest and at least 100 nucleotides that are at least 80% identical, preferably 90% identical to a region of SEQ ID NO:2 at the other side of the gene of interest. Preferably, the targeting sequences consist of at least 500 nucleotides that are at least 80% identical, preferably 90% identical to a region of SEQ ID NO:1 at one side of the gene of interest and at least 500 nucleotides that are at least 80% identical, preferably 90% identical to a region of SEQ ID NO:2 at the other side of the gene of interest. Most preferably, the targeting sequences consist of at least 1000 nucleotides that are at least 80% identical, preferably 90% identical to a region of SEQ ID NO:1 at one side of the gene of interest and at least 1000 nucleotides that are at least 80% identical, preferably 90% identical to a region of SEQ ID NO:2 at the other side of the gene of interest. The percentage identity is measured with BLAST, according to Altschul et al. (1997). A preferred example of a sequence homologous to SEQ ID NO:1 is given in SEQ ID NO:7. For the purpose of the invention, SEQ ID NO:1 and SEQ ID NO:7 are interchangeable.
[0032]Transformation methods of Lactococcus are known to the person skilled in the art and include, but are not limited to, protoplast transformation and electroporation.
[0033]A transformed Lactococcus sp. strain according to the invention is useful for the delivery of prophylactic and/or therapeutic molecules and can be used in a pharmaceutical composition. The delivery of such molecules has been disclosed, as a nonlimiting example, in PCT International Publication Numbers WO 97/14806 and WO 98/31786. Prophylactic and/or therapeutic molecules include, but are not limited to, polypeptides such as insulin, growth hormone, prolactin, calcitonin, group 1 cytokines, group 2 cytokines and group 3 cytokines and polysaccharides such as polysaccharide antigens from pathogenic bacteria. A preferred embodiment is the use of a Lactococcus sp. strain according to the invention to deliver human Interleukin-10. This strain can be used in the manufacture of a medicament to treat Crohn's disease as indicated herein.
[0034]The invention is further explained with the use of the following illustrative examples.
EXAMPLES
[0035]From L. lactis MG1363 (Gasson, 1983) regions flanking the sequence according to Ross et al. (1990a) have been cloned.
[0036]The knowledge of these sequences is of critical importance for the genetic engineering of any Lactococcus strain in a way as described below, as the strategy will employ double homologous recombination in the areas of 1000 by at the 5' end (SEQ ID NO:1) and 1000 by at the 3' end (SEQ ID NO:2) of thyA, the "thyA target." These sequences are not available from any public source to date. These flanking DNA fragments have been cloned and their sequence has been identified. The sequence of the whole locus is shown in SEQ ID NO:3; a mutant version of this sequence is shown in SEQ ID NO:5. Both the 5' and 3' sequences are different from the sequence at GenBank AE006385 describing the L. lactis IL1403 sequence (Bolotin, in press) or at AF336368 describing the L. lactis subsp. lactis CHCC373 sequence. From the literature, it is apparent that homologous recombination by use of the published sequences adjacent to thyA (Ross et al., 1990a) (86 by at the 5' end and 31 by at the 3' end) is virtually impossible due to the shortness of the sequences. Indeed, Biswas et al. (1993) describe a logarithmically decreasing correlation between the length of the homologous sequences and the frequency of integration. The sequences of L. lactis Thy 11, Thy 12, Thy 15 and Thy 16 at the thyA locus as determined in the present invention are given by SEQ ID NOS:19, 20, 21, 22 respectively.
[0037]The thyA replacement is performed by making suitable replacements in a plasmid-borne version of the thyA target, as described below. The carrier plasmid is a derivative of pORI19 (Law et al., 1995), a replication-defective plasmid, which only transfers the erythromycin resistance to a given strain when a first homologous recombination, at either the 5' 1000 by or at the 3' 1000 by of the thyA target. A second homologous recombination at the 3' 1000 by or at the 5' 1000 by of the thyA target yields the desired strain.
[0038]The thyA gene is replaced by a synthetic gene encoding a protein which has the L. lactis Usp45 secretion leader (van Asseldonk et al., 1990) fused to a protein of an identical amino acid sequence when: (a) the mature part of human-Interleukin 10 (hIL-10) or (b) the mature part of hIL-10 in which proline at position 2 has been replaced with alanine or (c) the mature part of hIL-10 in which the first two amino acids have been deleted; (a), (b) and (c) are called hIL-10 analogs, the fusion products are called Usp45-hIL-10.
[0039]The thyA gene is replaced by an expression unit comprising the lactococcal P1 promoter (Waterfield et al., 1995), the E. coli bacteriophage T7 expression signals, putative RNA stabilizing sequence and modified gene10 ribosomal binding site (Wells and Schofield, 1996).
[0040]At the 5' end, the insertion is performed in such way that the ATG of thyA is fused to the P1-T7Usp45-hIL-10 expression unit.
TABLE-US-00003 (SEQ ID NO: 27) 5' agataggaaaatttcatgacttacgcagatcaagttttt . . . thyA wild-type (SEQ ID NO: 14) gattaagtcatcttacctctt . . . P1-T7-usp45-hIL10 (SEQ ID NO: 15) 5' agataggaaaatttcatggattaagtcatcttacctctt . . . thyA, P1-T7-usp45-hIL10
[0041]Alternatively, at the 5' end, the insertion is performed in such a way that the thyA ATG is not included:
TABLE-US-00004 (SEQ ID NO: 28) 5' agataggaaaatttcacttacgcagatcaagttttt . . . thyA wild-type (SEQ ID NO: 14) gattaagtcatcttacctctt . . . P1-T7-usp45-hIL10 (SEQ ID NO: 16) 5' agataggaaaatttcgattaagtcatcttacctctt . . . thyA, P1-T7-usp-hIL10
[0042]Alternatively, at the 5' end, the insertion is performed in such a way that the thyA promoter (Ross, 1990 a) is not included:
TABLE-US-00005 (SEQ ID NO: 29) 5' tctgagaggttattttgggaaatactattgaaccatatcgaggtg tgtggtataatgaagggaattaaaaaagataggaaaatttcatg . . . thyA wild-type (SEQ ID NO: 29) gattaagtcatcttacctctt . . . P1-T7-usp45-hIL10 (SEQ ID NO: 14) 5' tctgagaggttattttgggaaatactagattaagtcatcttacct ctt . . . thyA, P1-T7-usp45-hIL10
[0043]At the 3' end, an ACTAGT SpeI restriction site was engineered immediately adjacent to the TAA stop codon of the usp45-hIL-10 sequence. This was ligated in a TCTAGA XbaI restriction site, which was engineered immediately following the thyA stop codon
TABLE-US-00006 (SEQ ID NO: 30) aaaatccgtaactaactagt 3' . . . usp45-hIL10 (SEQ ID NO: 31) gatttagcaatttaaattaaattaatctataagtt 3' . . . thyA-wild-type (SEQ ID NO: 32) tctagaattaatctataagttactga 3' . . . engineered thyA target (SEQ ID NO: 18) aaaatccgtaactaactagaattaatctataagttactga 3' . . . thyA, usp45-hIL10
[0044]These constructs are depicted in FIG. 2. The sequences of pOThy11, pOThy12 pOThy15 and pOThy16 are given by SEQ ID NOs: 23, 24, 25, and 26 respectively. The resulting strains are thyA deficient, a mutant not yet described for L. lactis. It is strictly dependent upon the addition of thymine or thymidine for growth.
[0045]The map of the deletion, as well as the PCR analysis of all the isolates/mutants of the present invention, is shown in FIGS. 3A-4B. The presence of the thymidylate synthase and the Interleukin 10 (IL-10) gene in the wild-type strain and in the independent isolates/mutant was analyzed by Southern analysis as shown in FIGS. 5A-6B. The region around the inserted hIL-10 gene was isolated by PCR and the DNA sequence was verified. The structure is identical to the predicted sequence.
[0046]Human Interleukin-10 (hIL-10) production in the mutants was checked by western blot analysis and compared with the parental strain, transformed with pTREX1 as negative control, and the parental strain, transformed with the IL10-producing plasmid pT1HIL10apxa as a positive control (FIG. 7A). The concentration in the culture supernatant was quantified using ELISA. As shown in FIG. 7B, both isolates of the mutant produce a comparable, significant amount of hIL-10, be it far less than the strain, transformed with the nonintegrative plasmid pT1HIL10apxa. FIGS. 8A and 8B further demonstrate that all mutants produce a significant amount of hIL-10.
[0047]FIG. 9 shows the production of hIL-10 by the L. lactis strains LL108 carrying pOThy11, pOThy12, or pOThy16. Quantification (by ELISA) of hIL-10 present in the culture supernatant of the indicated strains is shown. The N-terminal protein sequence of the recombinant hIL-10 was determined by Edman degradation and was shown to be identical to the structure as predicted for the mature, recombinant hIL-10. The protein showed full biological activity. LL108 is an L. lactis strain carrying a genomic integration of the repA gene, required for replication of pORI19 derived plasmids such as pOThy 11, pOThy12, pOThy15 or pOThy16. This strain was kindly donated by Dr. Jan Kok, University of Groningen, The Netherlands. The plasmids pOThy11, pOThy12, pOThy15 and pOThy16 carry the synthetic human IL-10 gene in different promoter configurations (see FIG. 2), flanked by approximately 1 kB of genomic DNA derived from the thyA locus, upstream and downstream from thyA. These plasmids were used for the construction of the genomic integration as described.
[0048]The effect of the thymidylate synthase deletion on the growth in thymidine less and thymidine-supplemented media was tested; the results are summarized in FIGS. 10 and 11. An absence of thymidine in the medium strongly limits the growth of the mutant and even results in a decrease of colony-forming units after four hours of cultivation. The addition of thymidine to the medium results in an identical growth curve and amount of colony-forming units, compared to the wild-type strain, indicating that the mutant does not affect the growth or viability in thymidine-supplemented medium. FIG. 11 clearly demonstrates that Thy12 viability is severely impaired in the absence of thymidine.
[0049]FIG. 12 finally shows that L. lactis Thy12 passes through the intestine of the mice at the same speed as MG1363. Loss of viability does not appear to differ between Thy12 and MG1363. Thy12 appears fully dependent on thymidine for growth, indicating that no Thy12 bacteria had taken up a foreign thyA gene.
REFERENCES
[0050]Altschul S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402. [0051]Biswas I., A. Gruss, S. D. Ehrlich, et al. (1993). High-efficiency gene inactivation and replacement system for gram-positive bacteria. J. Bacteriol. 175, 3628-3635. [0052]Gasson M. J. (1983). Plasmid complements of Streptococcus lactis NCDO 712 and other lactic streptococci after protoplast-induced curing. J. Bacteriol. 154, 1-9. [0053]Kaplan D. L., C. Mello, T. Sano, C. Cantor, and C. Smith (1999). Streptavidin-based containment system for genetically engineered microorganisms. Biomol. Eng. 31, 135-140. [0054]Knudsen S., P. Saadbye, L. H. Hansen, A. Collier, B. L. Jacobsen, J. Schlundt, and O. H. Karlstrom (1995). Development and testing of improved suicide functions for biological containment of bacteria. Appl. Environ. Microbiol. 61, 985-991. [0055]Law J., G. Buist, A. Haandrikman, et al. (1995). A system to generate chromosomal mutations in Lactococcus lactis which allows fast analysis of targeted genes. J. Bacteriol. 177, 7011-7018. [0056]Molina L., C. Ramos, M. C. Ronchel, S. Molin, and J. L. Ramos (1998). Construction of an efficient biologically contained Pseudomonas putida strain and its survival in outdoor assays. Appl. Environ. Microbiol. 64, 2072-2078. [0057]Ross P., F. O'Gara, and S. Condon (1990a). Cloning and characterization of the thymidylate synthase gene from Lactococcus lactis subsp. Lactis. Appl. Environ. Microbiol. 56, 2156-2163. [0058]Ross P., F. O'Gara, and S. Condon (1990b). Thymidylate synthase gene from Lactococcus lactis as a genetic marker: an alternative to antibiotic resistance. Appl. Environ. Microbiol. 56, 2164-2169. [0059]Schweder T., K. Hofmann, and M. Hecker (1995). Escherichia coli K12 relA strains as safe hosts for expression of recombinant DNA. Appl. Environ. Microbiol. 42, 718-723. [0060]Steidler L., W. Hans, L. Schotte, S, Neirynck, F. Obermeier, W. Falk, W. Fiers, and E. Remaut (2000). Treatment of murine colitis by Lactococcus lactis secreting Interleukin-10. Science 289, 1352-1355. [0061]Steidler L., J. M. Wells, A. Raeymaekers, J. Vandekerckhove, W. Fiers, and E. Remaut (1995). Secretion of biologically active murine Interleukin-2 by Lactococcus lactis subsp. Lactis. Appl. Environ. Microbiol. 61, 1627-1629. [0062]Tedin K., A. Witte, G. Reisinger, W. Lubitz, and U. Basi (1995). Evaluation of the E. coli ribosomal rrnB P1 promoter and phage derived lysis genes for the use in biological containment system: a concept study. J. Biotechnol. 39, 137-148. [0063]van Asseldonk M., G. Rutten, M. Oteman, et al. (1990). Cloning of usp45, a gene encoding a secreted protein from Lactococcus lactis subsp. lactis MG1363. Gene 95, 155-160. [0064]Waterfield N. R., R. W. Le Page, P. W. Wilson, et al. (1995). The isolation of lactococcal promoters and their use in investigating bacterial luciferase synthesis in Lactococcus lactis. Gene 165, 9-15. [0065]Wells J. M. and K. M. Schofield (1996). Cloning and expression vectors for Lactococci. Nato ASI series H 98, 37-62.
Sequence CWU
1
3211000DNALactococcus lactis 1tatatacaat tgagcaaaag aaatttagtt attaaattac
cagctggagt tcctccaatg 60gttgtagatt cactaagtcc agcaattatt tcaatggtga
ttttctgttt gatgttcggg 120attcgtgtgg gattctctta tacgccattc catgatattt
tcaatttctc aacacaacta 180attcaagcac cgttgactgg tgctgtggca aatccatggg
ttcttatggg catctttacc 240tttggtaatt tcttatggtt ctttggtatc caccctaatt
taattggggg aattttaaat 300ccattgttat taacaatgtc atatgctaat attgatgcct
atgctgccgg aaaacctgta 360ccatacttac aaatgatgat tgtgtttgct gtgggtgcga
acgcatgggg cggaagtgga 420aatacttatg ggttagttat ttcaatgttt acggcaaaat
ctgaacgcta taaacaatta 480ttaaaattag gtgcaattcc tagtattttc aatatcagtg
aaccattact ttttggtctt 540ccaatgatgt taaatcctct tttctttatt cctttggttt
tccaaccagc aattttagga 600actgtagcat tgggcttggc aaagatatta tatattacaa
atctgaatcc aatgacggca 660cttcttcctt ggacgacacc agcacctgtg agaatggcca
tttcaggtgg acttccattt 720ttgattattt ttgcaatctg tttagtcttg aatgttctta
tttactaccc attctttaag 780gtggcgtata ataaagcttt agaagaagaa aaagcagctg
ttgaattaga gggttcagaa 840actgcctgat ggatattttt tataaatctg gtttgaacaa
attatattga catctctttt 900tctatcctga taattctgag aggttatttt gggaaatact
attgaaccat atcgaggtgt 960gtggtataat gaagggaatt aaaaaagata ggaaaatttc
100021000DNALactococcus lactis 2taaattaatc
tataagttac tgacaaaact gtcagtaact ttttttgtgg gaaaaatgta 60tttttatgac
cgtaaagaat ctgtcagtag aagtctgaaa ttcgtttaaa aatcgactag 120aataggcttt
aacgacaaga tgttttaaag agtacgctct aaatgtattt ttgtattttt 180gtttgattac
gaagtttaaa tttaattgac aaatgtttta aaatgagtat aataggactt 240gtaaccgatt
ttatttttat aaaggagaaa gaaagatgaa caaactttta cttggaacag 300cctttatagg
ggctagctta ctgattggtg ggggtgctca tgcagatcaa atgtttatcg 360tttgtataat
cataatactg gtgagcactc tatacaacta gtgggacacc aaaagaatgc 420taatgtaagt
gcgggttgga cttatgaagg tgtcggttgg atcgcaccaa caacaagttc 480aagcccagtt
taccgtgtgt acaatccaaa tgcattatta cacaaaaagc aagtatgaag 540cccaaagttt
agtaaataag ggttggaaat gggataataa cggaaaggcg gtcttctatt 600ctggaggttc
tcaagccgta tatgtcgctt ataatcccaa tgcacaatct ggcgctcaca 660attacacgga
aagtagcttt gagcaaaata gcttattgaa tactggttgg aaatatgggg 720cagtagcttg
gtacgggatt ggagtaaaaa acgaaatgtt aaacattgct caaattgtta 780gtggtaattt
ttctagtatt gttggaactt ggaaagatac ttctggaaat atgcttgaaa 840ttaatgcaat
gggaaatctt actttaatat ggaaaggggc aaagaatcaa acctttgaac 900ttggcgcagg
tcaacaattt aatggaactg cagatattgc cttaaaaaat ggagagattt 960cccctggtag
tccacttaac atttttgttg taccaacaga
100037157DNALactococcus lactisCDS(4473)..(5312) 3gnagnggttt tcccagtccg
acgttgtaaa acgacggcca gtgaattcat taacagcctt 60ttgagcagct agctcattat
tttgaaataa atcataaatt tctttcccac tatctgattt 120atgattgcta gcatatttgt
tgtataatcg aacgagtcca ttttgaacag atccatatag 180attgagtgaa ctataaaata
catctatatc atagttgagt ttgttcacaa tcatgagacc 240aaattctcca gcatttcgtg
tagaaccacg ataaagctgt ttatttagca aaatggcacc 300tccgacacct gtacctaaag
tcatgcaaat aaaattttgg ctttcttgtc cattccctag 360ccaaagttca gctagacctg
cacaattggc atcattttca acataaaccg gaagatttaa 420atgtttttgt agttctgtcc
ccaatggata gccataaaga tcagttagag ctcctgccag 480taataatgtt ccctttttgt
cagaagttcc gggaacactt acaccaattg cagatactga 540atgatgagct tttaactgat
gaatatttgt gagcaagcta tccataattt tttctttttt 600taatggggtt ggaacttgta
aatgttgtat gatcgttcca tcactagtta caagaccaaa 660ttttataaat gtaccaccga
tatcaattcc tattgaataa tgcatctttt attacctctt 720tctctaattt gttttagtat
agcaaaatca aaaaattaat tatggtatgc attatagata 780tgttgtataa ttttcacaaa
aacggagaaa actatgaaaa caatagaaca gctcatgata 840gattcagcag atttaatgtc
agattttatt caattgacaa tttttatatt ccgcaaggag 900gattttcaac ttttttatag
gagtgatgaa gaagagcaag ctttttcaag gtaatgactc 960caacttattg atagtgtttt
atgttcagat aatgcccgat gactttgtca tgcagctcca 1020ccgattttga gaacgacagc
gacttccgtc ccagccgtgc caggtgctgc ctcagattca 1080ggttatgccg ctcaattcgc
tgcgtatatc gcttgctgat tacgtgcagc tttcccttca 1140ggcgggattc atacagcggc
cagccatccg tcatccatat caccacgtca aagggtgaca 1200gcaggctcat aagacgcccc
agcgtcgcca tagtgcgttc accgaatacg tgcgcaacaa 1260ccgtcttccg gagactgtca
tacgcgtaaa acagccagcg ctggcgcgat ttagccccga 1320catagcccca ctgttcgtcc
atttccgcgc agacgatgac gtcactgccc ggctgtatgc 1380gcgaggttac cgactgcggc
ctgagttttt taagtgacgt aaaatcgtgt tgaggccaac 1440gcccataatg cgggctgttg
cccggcatcc aacgccattc atggccatat caatgatttt 1500ctggtgcgta ccgggttgag
aagcggtgta agtgaactgc agttgccatg ttttacggca 1560gtgagagcag agatagcgct
gatgtccggc ggtgcttttg ccgttacgca ccaccccgtc 1620agtagctgaa caggagggac
agctgataga aacagaagcc actggagcac ctcaaaaaca 1680ccatcataca ctaaatcagt
aagttggcag catcaccctt tttcaaaaga aatcatcgct 1740catttatctc agttgccctt
gaaggaagag gtgaatttat tttatatgcc taagataaaa 1800ggatatatta cttatttttc
tgtatttggt aaagaggagt atcttctact tatttttaaa 1860ggacaagaaa aacttgcaaa
taatcctttc cccgttgaag taaaacaatt attaaaaagt 1920ggtattttac tctatcaaat
gatttttcaa gaaaaattag attatgaaga attatttgag 1980aaaaatcagc atattatttc
tccattgctt gctgctaaac caattgaatg gaatgattcc 2040aatacgtgag gaaagtaaat
tcccataaaa catatctttt tgaaaaatat ttgggggaat 2100gtgttattcg tggagatgtt
gcagagttaa aaaaagcttt ttcaaattat atgaataaag 2160gaactgctgg aaaattatct
aataattcaa tgcgacataa gaaaaacatt ttgatttcag 2220tcatcactat gactactcgt
tcggctatac agggaggatt acctgaagaa gaagcttttt 2280tgatgagtga tttatatatt
caagagcttg aagaattaac ggaattagaa gaaattagaa 2340cgcttgccta taatgtgatg
atcgattttg cagataaagt gaaacagcat cgatattgtc 2400aggtttctta taaaatatta
tcttgtcaaa agtatattgt taatcattta tacgaaaaac 2460taagtgtgag tgaaattgca
gaagagctac acatgaatat ttcttattta tcttcacaat 2520tcaaaaaaga gacagggcaa
acaattacaa actttattca ggagaagcga atagaagaag 2580ctagagaatt aatccttttc
tcagactatc ctttttcaag aatttatacc ttgttggttt 2640tactgccaaa gtcattttat
aaaaatattt aaaaaatata ctggaataac tcccaaaaag 2700tttcaagatc agtatattta
tcatgcctct acatcaatat atgattgaaa ttaaaaaaag 2760acctagaatt tcaaaattga
taaaatacat acctaaaata ttaattctgt actattacgg 2820gtggagtatc tactgtataa
tgagggtata aattatggaa gaagggagta aaactaaatt 2880tattgatggt tttacgaatt
aattaggata ttttttttaa aaaccaaaga aaacgcttac 2940aaacgttaaa ggagtgaatc
taaagatgga caaatttgaa aaatggctaa ataagacctt 3000gatgccactt gcctcaaaaa
tgaataaaaa tcatttcatt tcggcattaa gtgaagcatt 3060tatgagatgt atgcccttaa
cattagggat tgcattattg acaattatag gatactttcc 3120agttcctgcc tgggtagatt
tcttaaactc tattggactg gctcagcatt tttcagcagt 3180tattggtgca gttaccagtg
cgctagcaat ttatgtaact tataattttg cttattctta 3240tgtaaatcgt catgaatata
atggccatac ggccggttta ttatcaatcg caagtttgtt 3300aatgctaatg ccacaaatta
ttactgtccc tgtagtaaaa aacattccaa ccgaatttcc 3360gaaatccgcg gtagttgaca
gtgtgtcaaa tgttgaagca tttcaaacgg tatacacggg 3420tagcacagga ttaattgtag
caatcataat tggttttatt gtttcattag tctatataca 3480attgagcaaa agaaatttag
ttattaaatt accagctgga gttcctccaa tggttgtaga 3540ttcactaagt ccagcaatta
tttcaatggt gattttctgt ttgatgttcg ggattcgtgt 3600gggattctct tatacgccat
tccatgatat tttcaatttc tcaacacaac taattcaagc 3660accgttgact ggtgctgtgg
caaatccatg ggttcttatg ggcatcttta cctttggtaa 3720tttcttatgg ttctttggta
tccaccctaa tttaattggg ggaattttaa atccattgtt 3780attaacaatg tcatatgcta
atattgatgc ctatgctgcc ggaaaacctg taccatactt 3840acaaatgatg attgtgtttg
ctgtgggtgc gaacgcatgg ggcggaagtg gaaatactta 3900tgggttagtt atttcaatgt
ttacggcaaa atctgaacgc tataaacaat tattaaaatt 3960aggtgcaatt cctagtattt
tcaatatcag tgaaccatta ctttttggtc ttccaatgat 4020gttaaatcct cttttcttta
ttcctttggt tttccaacca gcaattttag gaactgtagc 4080attgggcttg gcaaagatat
tatatattac aaatctgaat ccaatgacgg cacttcttcc 4140ttggacgaca ccagcacctg
tgagaatggc catttcaggt ggacttccat ttttgattat 4200ttttgcaatc tgtttagtct
tgaatgttct tatttactac ccattcttta aggtggcgta 4260taataaagct ttagaagaag
aaaaagcagc tgttgaatta gagggttcag aaactgcctg 4320atggatattt tttataaatc
tggtttgaac aaattatatt gacatctctt tttctatcct 4380gataattctg agaggttatt
ttgggaaata ctattgaacc atatcgaggt gtgtggtata 4440atgaagggaa ttaaaaaaga
taggaaaatt tc atg act tac gca gat caa gtt 4493
Met Thr Tyr Ala Asp Gln Val
1 5ttt aaa caa aat atc caa aat atc cta gat aat ggt gtt
ttt tca gaa 4541Phe Lys Gln Asn Ile Gln Asn Ile Leu Asp Asn Gly Val
Phe Ser Glu 10 15 20aat gca aga
cca aag tat aag gat ggt caa atg gcg aat agc aaa tat 4589Asn Ala Arg
Pro Lys Tyr Lys Asp Gly Gln Met Ala Asn Ser Lys Tyr 25
30 35gtc act ggt tca ttc gtt act tat gat ttg caa aag
ggg gag ttt cca 4637Val Thr Gly Ser Phe Val Thr Tyr Asp Leu Gln Lys
Gly Glu Phe Pro40 45 50
55att acc act ttg cgt cca att cca atc aaa tct gct att aaa gaa ttg
4685Ile Thr Thr Leu Arg Pro Ile Pro Ile Lys Ser Ala Ile Lys Glu Leu
60 65 70atg tgg ata tac caa
gac caa aca agt gaa ctt tct gtt ctc gaa gag 4733Met Trp Ile Tyr Gln
Asp Gln Thr Ser Glu Leu Ser Val Leu Glu Glu 75
80 85aag tat gga gtc aaa tac tgg gga gaa tgg gga att
ggt gat ggt acg 4781Lys Tyr Gly Val Lys Tyr Trp Gly Glu Trp Gly Ile
Gly Asp Gly Thr 90 95 100att ggg
caa cgt tat ggt gca aca gtc aaa aaa tat aat atc att ggt 4829Ile Gly
Gln Arg Tyr Gly Ala Thr Val Lys Lys Tyr Asn Ile Ile Gly 105
110 115aaa tta tta gaa ggc ttg gcc aaa aat cca tgg
aat cgt cgt aat atc 4877Lys Leu Leu Glu Gly Leu Ala Lys Asn Pro Trp
Asn Arg Arg Asn Ile120 125 130
135atc aac ctt tgg cag tat gaa gat ttt gag gaa aca gaa ggt ctt tta
4925Ile Asn Leu Trp Gln Tyr Glu Asp Phe Glu Glu Thr Glu Gly Leu Leu
140 145 150cca tgt gct ttc caa
acg atg ttt gat gtc cgt cga gaa aaa gat ggt 4973Pro Cys Ala Phe Gln
Thr Met Phe Asp Val Arg Arg Glu Lys Asp Gly 155
160 165cag att tat ttg gat gcc aca ctg att caa cgt tca
aac gat atg ctt 5021Gln Ile Tyr Leu Asp Ala Thr Leu Ile Gln Arg Ser
Asn Asp Met Leu 170 175 180gta gcc
cac cat atc aat gcg atg caa tat gtt gct ttg caa atg atg 5069Val Ala
His His Ile Asn Ala Met Gln Tyr Val Ala Leu Gln Met Met 185
190 195att gca aaa cat ttt tct tgg aaa gtt ggg aaa
ttc ttt tat ttt gta 5117Ile Ala Lys His Phe Ser Trp Lys Val Gly Lys
Phe Phe Tyr Phe Val200 205 210
215aat aat tta cat att tat gat aat cag ttt gag cag gca aat gaa tta
5165Asn Asn Leu His Ile Tyr Asp Asn Gln Phe Glu Gln Ala Asn Glu Leu
220 225 230atg aag cga aca gct
tct gaa aaa gaa cct cgt ttg gtc ctt aat gtt 5213Met Lys Arg Thr Ala
Ser Glu Lys Glu Pro Arg Leu Val Leu Asn Val 235
240 245cct gat ggt aca aac ttt ttc gat att aaa cct gaa
gat ttt gaa ctt 5261Pro Asp Gly Thr Asn Phe Phe Asp Ile Lys Pro Glu
Asp Phe Glu Leu 250 255 260gtg gac
tat gag cca gta aaa cct caa ttg aaa ttt gat tta gca att 5309Val Asp
Tyr Glu Pro Val Lys Pro Gln Leu Lys Phe Asp Leu Ala Ile 265
270 275taa attaatctat aagttactga caaaactgtc
agtaactttt tttgtgggaa 5362aaatgtattt ttatgaccgt aaagaatctg
tcagtagaag tctgaaattc gtttaaaaat 5422cgactagaat aggctttaac gacaagatgt
tttaaagagt acgctctaaa tgtatttttg 5482tatttttgtt tgattacgaa gtttaaattt
aattgacaaa tgttttaaaa tgagtataat 5542aggacttgta accgatttta tttttataaa
ggagaaagaa agatgaacaa acttttactt 5602ggaacagcct ttataggggc tagcttactg
attggtgggg gtgctcatgc agatcaaatg 5662tttatcgttt gtataatcat aatactggtg
agcactctat acaactagtg ggacaccaaa 5722agaatgctaa tgtaagtgcg ggttggactt
atgaaggtgt cggttggatc gcaccaacaa 5782caagttcaag cccagtttac cgtgtgtaca
atccaaatgc attattacac aaaaagcaag 5842tatgaagccc aaagtttagt aaataagggt
tggaaatggg ataataacgg aaaggcggtc 5902ttctattctg gaggttctca agccgtatat
gtcgcttata atcccaatgc acaatctggc 5962gctcacaatt acacggaaag tagctttgag
caaaatagct tattgaatac tggttggaaa 6022tatggggcag tagcttggta cgggattgga
gtaaaaaacg aaatgttaaa cattgctcaa 6082attgttagtg gtaatttttc tagtattgtt
ggaacttgga aagatacttc tggaaatatg 6142cttgaaatta atgcaatggg aaatcttact
ttaatatgga aaggggcaaa gaatcaaacc 6202tttgaacttg gcgcaggtca acaatttaat
ggaactgcag atattgcctt aaaaaatgga 6262gagatttccc ctggtagtcc acttaacatt
tttgttgtac caacagaagt tgctttccct 6322aataataaaa aagtagacga ttcaactggg
caacaacgaa tttttgtgaa ttattctggt 6382acaagccctc aaatggcgaa tagtatggca
gcggtggctt tttttagagt tattccatga 6442ttatattaaa gttagaattg aataaaatgt
attattaaaa agataatatt atatcacgac 6502aaggcgacat ctatcaactt taccactggt
atggaagtga ccattattac atcaggaaac 6562gctaaaacgg ttgtttttac acccgtaaaa
taaataataa aataatgtgn aattactgac 6622agcattttgt cagtaatttt ttttatcaaa
atcacacaaa aatgttcgtt gacgaacaaa 6682aaaaactatg ttataataat tcgtatgcga
actaaaaaag aagcgattgg ccgactttta 6742aaagtagcca gcaaccaaat gtctcgagaa
tttgataatt ttgcagctca acttgatttg 6802acaggtcagc aaatgtcaat tttagatttt
cttggaaatc aaagcgaaga aggttcagga 6862aaagaaatta gtcagacgat gattgaatta
gaatttaata tccgacgttc aacaacgacg 6922gaaattttac agcgcatgga aaagcggctt
ttaattaatc gaagaacaag cctgaccgat 6982gcccgccaaa aatcagttga attaactgaa
gaagggaaaa gatatttacc tgaaatcagg 7042gcttatatcc aagcacataa taaaaaagct
tggcgtaatc atggtcatag ctgtttncct 7102ggttaggngg gccannnnnn nnnnnnnnnn
nnncnnnnnc nnnnncnnnn cnnnc 71574279PRTLactococcus
lactismisc_feature(2)..(2)'n' may be any base 4Met Thr Tyr Ala Asp Gln
Val Phe Lys Gln Asn Ile Gln Asn Ile Leu1 5
10 15Asp Asn Gly Val Phe Ser Glu Asn Ala Arg Pro Lys
Tyr Lys Asp Gly 20 25 30Gln
Met Ala Asn Ser Lys Tyr Val Thr Gly Ser Phe Val Thr Tyr Asp 35
40 45Leu Gln Lys Gly Glu Phe Pro Ile Thr
Thr Leu Arg Pro Ile Pro Ile 50 55
60Lys Ser Ala Ile Lys Glu Leu Met Trp Ile Tyr Gln Asp Gln Thr Ser65
70 75 80Glu Leu Ser Val Leu
Glu Glu Lys Tyr Gly Val Lys Tyr Trp Gly Glu 85
90 95Trp Gly Ile Gly Asp Gly Thr Ile Gly Gln Arg
Tyr Gly Ala Thr Val 100 105
110Lys Lys Tyr Asn Ile Ile Gly Lys Leu Leu Glu Gly Leu Ala Lys Asn
115 120 125Pro Trp Asn Arg Arg Asn Ile
Ile Asn Leu Trp Gln Tyr Glu Asp Phe 130 135
140Glu Glu Thr Glu Gly Leu Leu Pro Cys Ala Phe Gln Thr Met Phe
Asp145 150 155 160Val Arg
Arg Glu Lys Asp Gly Gln Ile Tyr Leu Asp Ala Thr Leu Ile
165 170 175Gln Arg Ser Asn Asp Met Leu
Val Ala His His Ile Asn Ala Met Gln 180 185
190Tyr Val Ala Leu Gln Met Met Ile Ala Lys His Phe Ser Trp
Lys Val 195 200 205Gly Lys Phe Phe
Tyr Phe Val Asn Asn Leu His Ile Tyr Asp Asn Gln 210
215 220Phe Glu Gln Ala Asn Glu Leu Met Lys Arg Thr Ala
Ser Glu Lys Glu225 230 235
240Pro Arg Leu Val Leu Asn Val Pro Asp Gly Thr Asn Phe Phe Asp Ile
245 250 255Lys Pro Glu Asp Phe
Glu Leu Val Asp Tyr Glu Pro Val Lys Pro Gln 260
265 270Leu Lys Phe Asp Leu Ala Ile
27557094DNALactococcus lactisCDS(4469)..(5305) 5ggttttccca gtccgacgtt
gtaaaacgac ggccagtgaa ttcattaaca gccttttgag 60cagctagctc attattttga
aataaatcat aaatttcttt cccactatct gatttatgat 120tgctagcata tttgttgtat
aatcgaacga gtccattttg aacagatcca tatagattga 180gtgaactata aaatacatct
atatcatagt tgagtttgtt cacaatcatg agaccaaatt 240ctccagcatt tcgtgtagaa
ccacgataaa gctgtttatt tagcaaaatg gcacctccga 300cacctgtacc taaagtcatg
caaataaaat tttggctttc ttgtccattc cctagccaaa 360gttcagctag acctgcacaa
ttggcatcat tttcaacata aaccggaaga tttaaatgtt 420tttgtagttc tgtccccaat
ggatagccat aaagatcagt tagagctcct gccagtaata 480atgttccctt tttgtcagaa
gttccgggaa cacttacacc aattgcagat actgaatgat 540gagcttttaa ctgatgaata
tttgtgagca agctatccat aattttttct ttttttaatg 600gggttggaac ttgtaaatgt
tgtatgatcg ttccatcact agttacaaga ccaaatttta 660taaatgtacc accgatatca
attcctattg aataatgcat cttttattac ctctttctct 720aatttgtttt agtatagcaa
aatcaaaaaa ttaattatgg tatgcattat agatatgttg 780tataattttc acaaaaacgg
agaaaactat gaaaacaata gaacagctca tgatagattc 840agcagattta atgtcagatt
ttattcaatt gacaattttt atattccgca aggaggattt 900tcaacttttt tataggagtg
atgaagaaga gcaagctttt tcaaggtaat gactccaact 960tattgatagt gttttatgtt
cagataatgc ccgatgactt tgtcatgcag ctccaccgat 1020tttgagaacg acagcgactt
ccgtcccagc cgtgccaggt gctgcctcag attcaggtta 1080tgccgctcaa ttcgctgcgt
atatcgcttg ctgattacgt gcagctttcc cttcaggcgg 1140gattcataca gcggccagcc
atccgtcatc catatcacca cgtcaaaggg tgacagcagg 1200ctcataagac gccccagcgt
cgccatagtg cgttcaccga atacgtgcgc aacaaccgtc 1260ttccggagac tgtcatacgc
gtaaaacagc cagcgctggc gcgatttagc cccgacatag 1320ccccactgtt cgtccatttc
cgcgcagacg atgacgtcac tgcccggctg tatgcgcgag 1380gttaccgact gcggcctgag
ttttttaagt gacgtaaaat cgtgttgagg ccaacgccca 1440taatgcgggc tgttgcccgg
catccaacgc cattcatggc catatcaatg attttctggt 1500gcgtaccggg ttgagaagcg
gtgtaagtga actgcagttg ccatgtttta cggcagtgag 1560agcagagata gcgctgatgt
ccggcggtgc ttttgccgtt acgcaccacc ccgtcagtag 1620ctgaacagga gggacagctg
atagaaacag aagccactgg agcacctcaa aaacaccatc 1680atacactaaa tcagtaagtt
ggcagcatca ccctttttca aaagaaatca tcgctcattt 1740atctcagttg cccttgaagg
aagaggtgaa tttattttat atgcctaaga taaaaggata 1800tattacttat ttttctgtat
ttggtaaaga ggagtatctt ctacttattt ttaaaggaca 1860agaaaaactt gcaaataatc
ctttccccgt tgaagtaaaa caattattaa aaagtggtat 1920tttactctat caaatgattt
ttcaagaaaa attagattat gaagaattat ttgagaaaaa 1980tcagcatatt atttctccat
tgcttgctgc taaaccaatt gaatggaatg attccaatac 2040gtgaggaaag taaattccca
taaaacatat ctttttgaaa aatatttggg ggaatgtgtt 2100attcgtggag atgttgcaga
gttaaaaaaa gctttttcaa attatatgaa taaaggaact 2160gctggaaaat tatctaataa
ttcaatgcga cataagaaaa acattttgat ttcagtcatc 2220actatgacta ctcgttcggc
tatacaggga ggattacctg aagaagaagc ttttttgatg 2280agtgatttat atattcaaga
gcttgaagaa ttaacggaat tagaagaaat tagaacgctt 2340gcctataatg tgatgatcga
ttttgcagat aaagtgaaac agcatcgata ttgtcaggtt 2400tcttataaaa tattatcttg
tcaaaagtat attgttaatc atttatacga aaaactaagt 2460gtgagtgaaa ttgcagaaga
gctacacatg aatatttctt atttatcttc acaattcaaa 2520aaagagacag ggcaaacaat
tacaaacttt attcaggaga agcgaataga agaagctaga 2580gaattaatcc ttttctcaga
ctatcctttt tcaagaattt ataccttgtt ggttttactg 2640ccaaagtcat tttataaaaa
tatttaaaaa atatactgga ataactccca aaaagtttca 2700agatcagtat atttatcatg
cctctacatc aatatatgat tgaaattaaa aaaagaccta 2760gaatttcaaa attgataaaa
tacataccta aaatattaat tctgtactat tacgggtgga 2820gtatctactg tataatgagg
gtataaatta tggaagaagg gagtaaaact aaatttattg 2880atggttttac gaattaatta
ggatattttt tttaaaaacc aaagaaaacg cttacaaacg 2940ttaaaggagt gaatctaaag
atggacaaat ttgaaaaatg gctaaataag accttgatgc 3000cacttgcctc aaaaatgaat
aaaaatcatt tcatttcggc attaagtgaa gcatttatga 3060gatgtatgcc cttaacatta
gggattgcat tattgacaat tataggatac tttccagttc 3120ctgcctgggt agatttctta
aactctattg gactggctca gcatttttca gcagttattg 3180gtgcagttac cagtgcgcta
gcaatttatg taacttataa ttttgcttat tcttatgtaa 3240atcgtcatga atataatggc
catacggccg gtttattatc aatcgcaagt ttgttaatgc 3300taatgccaca aattattact
gtccctgtag taaaaaacat tccaaccgaa tttccgaaat 3360ccgcggtagt tgacagtgtg
tcaaatgttg aagcatttca aacggtatac acgggtagca 3420caggattaat tgtagcaatc
ataattggtt ttattgtttc attagtctat atacaattga 3480gcaaaagaaa tttagttatt
aaattaccag ctggagttcc tccaatggtt gtagattcac 3540taagtccagc aattatttca
atggtgattt tctgtttgat gttcgggatt cgtgtgggat 3600tctcttatac gccattccat
gatattttca atttctcaac acaactaatt caagcaccgt 3660tgactggtgc tgtggcaaat
ccatgggttc ttatgggcat ctttaccttt ggtaatttct 3720tatggttctt tggtatccac
cctaatttaa ttgggggaat tttaaatcca ttgttattaa 3780caatgtcata tgctaatatt
gatgcctatg ctgccggaaa acctgtacca tacttacaaa 3840tgatgattgt gtttgctgtg
ggtgcgaacg catggggcgg aagtggaaat acttatgggt 3900tagttatttc aatgtttacg
gcaaaatctg aacgctataa acaattatta aaattaggtg 3960caattcctag tattttcaat
atcagtgaac cattactttt tggtcttcca atgatgttaa 4020atcctctttt ctttattcct
ttggttttcc aaccagcaat tttaggaact gtagcattgg 4080gcttggcaaa gatattatat
attacaaatc tgaatccaat gacggcactt cttccttgga 4140cgacaccagc acctgtgaga
atggccattt caggtggact tccatttttg attatttttg 4200caatctgttt agtcttgaat
gttcttattt actacccatt ctttaaggtg gcgtataata 4260aagctttaga agaagaaaaa
gcagctgttg aattagaggg ttcagaaact gcctgatgga 4320tattttttat aaatctggtt
tgaacaaatt atattgacat ctctttttct atcctgataa 4380ttctgagagg ttattttggg
aaatactatt gaaccatatc gaggtggtgt ggtataatga 4440agggaattaa aaaagatagg
aaaatttc atg act tac gca gat caa gtt ttt 4492
Met Thr Tyr Ala Asp Gln Val Phe 1
5aaa caa aat atc caa aat atc cta gat aat ggt gtt ttt tca gaa
aat 4540Lys Gln Asn Ile Gln Asn Ile Leu Asp Asn Gly Val Phe Ser Glu
Asn 10 15 20gca aga cca aag tat aag
gat ggt caa atg gcg aat agc aaa tat gtc 4588Ala Arg Pro Lys Tyr Lys
Asp Gly Gln Met Ala Asn Ser Lys Tyr Val25 30
35 40act ggt tca ttc gtt act tat gat ttg caa aag
ggg gag ttt cca att 4636Thr Gly Ser Phe Val Thr Tyr Asp Leu Gln Lys
Gly Glu Phe Pro Ile 45 50
55acc act ttg cgt cca att cca atc aaa tct gct att aaa gaa ttg atg
4684Thr Thr Leu Arg Pro Ile Pro Ile Lys Ser Ala Ile Lys Glu Leu Met
60 65 70tgg ata tac caa gac caa
aca agt gaa ctt tct gtt ctc gaa gag aag 4732Trp Ile Tyr Gln Asp Gln
Thr Ser Glu Leu Ser Val Leu Glu Glu Lys 75 80
85tat gga gtc aaa tac tgg gga gaa tgg gga att ggt gat ggt
acg att 4780Tyr Gly Val Lys Tyr Trp Gly Glu Trp Gly Ile Gly Asp Gly
Thr Ile 90 95 100ggg caa cgt tat ggt
gca aca gtc aaa aaa tat aat atc att ggt aaa 4828Gly Gln Arg Tyr Gly
Ala Thr Val Lys Lys Tyr Asn Ile Ile Gly Lys105 110
115 120tta tta gaa ggc ttg gcc aaa aat cca tgg
aat cgt cgt aat atc atc 4876Leu Leu Glu Gly Leu Ala Lys Asn Pro Trp
Asn Arg Arg Asn Ile Ile 125 130
135aac ctt tgg cag tat gaa gat ttt gag gaa aca gaa ggt ctt tta cca
4924Asn Leu Trp Gln Tyr Glu Asp Phe Glu Glu Thr Glu Gly Leu Leu Pro
140 145 150tgt gct ttc caa acg atg
ttt gat gtc cgt cga gaa aaa gat ggt cag 4972Cys Ala Phe Gln Thr Met
Phe Asp Val Arg Arg Glu Lys Asp Gly Gln 155 160
165att tat ttg gat gcc aca ctg att caa cgt tca aac gat atg
ctt gta 5020Ile Tyr Leu Asp Ala Thr Leu Ile Gln Arg Ser Asn Asp Met
Leu Val 170 175 180gcc cac cat atc aat
gcg atg caa tat gtt gct ttg caa atg atg att 5068Ala His His Ile Asn
Ala Met Gln Tyr Val Ala Leu Gln Met Met Ile185 190
195 200gca aaa cat ttt tct tgg aaa gtt ggg aaa
ttc ttt tat ttt gta aat 5116Ala Lys His Phe Ser Trp Lys Val Gly Lys
Phe Phe Tyr Phe Val Asn 205 210
215aat tta cat att tat gat aat cag ttt gag cag gca aat gaa tta atg
5164Asn Leu His Ile Tyr Asp Asn Gln Phe Glu Gln Ala Asn Glu Leu Met
220 225 230aag cga aca gct tct gaa
aaa gaa cct cgt ttg gtc ctt aat gtt cct 5212Lys Arg Thr Ala Ser Glu
Lys Glu Pro Arg Leu Val Leu Asn Val Pro 235 240
245gat ggt aca aac ttt ttc gat att aaa cct gaa gat ttt gaa
ctt gtg 5260Asp Gly Thr Asn Phe Phe Asp Ile Lys Pro Glu Asp Phe Glu
Leu Val 250 255 260gac tat gag cca gta
aaa cct caa ttg aaa ttt gat tta gca att 5305Asp Tyr Glu Pro Val
Lys Pro Gln Leu Lys Phe Asp Leu Ala Ile265 270
275taaattaatc tataagttac tgacaaaact gtcagtaact ttttttgtgg gaaaaatgta
5365tttttatgac cgtaaagaat ctgtcagtag aagtctgaaa ttcgtttaaa aatcgactag
5425aataggcttt aacgacaaga tgttttaaag agtacgctct aaatgtattt ttgtattttt
5485gtttgattac gaagtttaaa tttaattgac aaatgtttta aaatgagtat aataggactt
5545gtaaccgatt ttatttttat aaaggagaaa gaaagatgaa caaactttta cttggaacag
5605cctttatagg ggctagctta ctgattggtg ggggtgctca tgcagatcaa atgtttatcg
5665tttgtataat cataatactg gtgagcactc tatacaacta gtgggacacc aaaagaatgc
5725taatgtaagt gcgggttgga cttatgaagg tgtcggttgg atcgcaccaa caacaagttc
5785aagcccagtt taccgtgtgt acaatccaaa tgcattatta cacaaaaagc aagtatgaag
5845cccaaagttt agtaaataag ggttggaaat gggataataa cggaaaggcg gtcttctatt
5905ctggaggttc tcaagccgta tatgtcgctt ataatcccaa tgcacaatct ggcgctcaca
5965attacacgga aagtagcttt gagcaaaata gcttattgaa tactggttgg aaatatgggg
6025cagtagcttg gtacgggatt ggagtaaaaa acgaaatgtt aaacattgct caaattgtta
6085gtggtaattt ttctagtatt gttggaactt ggaaagatac ttctggaaat atgcttgaaa
6145ttaatgcaat gggaaatctt actttaatat ggaaaggggc aaagaatcaa acctttgaac
6205ttggcgcagg tcaacaattt aatggaactg cagatattgc cttaaaaaat ggagagattt
6265cccctggtag tccacttaac atttttgttg taccaacaga agttgctttc cctaataata
6325aaaaagtaga cgattcaact gggcaacaac gaatttttgt gaattattct ggtacaagcc
6385ctcaaatggc gaatagtatg gcagcggtgg ctttttttag agttattcca tgattatatt
6445aaagttagaa ttgaataaaa tgtattatta aaaagataat attatatcac gacaaggcga
6505catctatcaa ctttaccact ggtatggaag tgaccattat tacatcagga aacgctaaaa
6565cggttgtttt tacacccgta aaataaataa taaaataatg tgaaattact gacagcattt
6625tgtcagtaat tttttttatc aaaatcacac aaaaatgttc gttgacgaac aaaaaaaact
6685atgttataat aattcgtatg cgaactaaaa aagaagcgat tggccgactt ttaaaagtag
6745ccagcaacca aatgtctcga gaatttgata attttgcagc tcaacttgat ttgacaggtc
6805agcaaatgtc aattttagat tttcttggaa atcaaagcga agaaggttca ggaaaagaaa
6865ttagtcagac gatgattgaa ttagaattta atatccgacg ttcaacaacg acggaaattt
6925tacagcgcat ggaaaagcgg cttttaatta atcgaagaac aagcctgacc gatgcccgcc
6985aaaaatcagt tgaattaact gaagaaggga aaagatattt acctgaaatc agggcttata
7045tccaagcaca taataaaaaa gcttggcgta atcatggtca tagctgttt
70946279PRTLactococcus lactis 6Met Thr Tyr Ala Asp Gln Val Phe Lys Gln
Asn Ile Gln Asn Ile Leu1 5 10
15Asp Asn Gly Val Phe Ser Glu Asn Ala Arg Pro Lys Tyr Lys Asp Gly
20 25 30Gln Met Ala Asn Ser Lys
Tyr Val Thr Gly Ser Phe Val Thr Tyr Asp 35 40
45Leu Gln Lys Gly Glu Phe Pro Ile Thr Thr Leu Arg Pro Ile
Pro Ile 50 55 60Lys Ser Ala Ile Lys
Glu Leu Met Trp Ile Tyr Gln Asp Gln Thr Ser65 70
75 80Glu Leu Ser Val Leu Glu Glu Lys Tyr Gly
Val Lys Tyr Trp Gly Glu 85 90
95Trp Gly Ile Gly Asp Gly Thr Ile Gly Gln Arg Tyr Gly Ala Thr Val
100 105 110Lys Lys Tyr Asn Ile
Ile Gly Lys Leu Leu Glu Gly Leu Ala Lys Asn 115
120 125Pro Trp Asn Arg Arg Asn Ile Ile Asn Leu Trp Gln
Tyr Glu Asp Phe 130 135 140Glu Glu Thr
Glu Gly Leu Leu Pro Cys Ala Phe Gln Thr Met Phe Asp145
150 155 160Val Arg Arg Glu Lys Asp Gly
Gln Ile Tyr Leu Asp Ala Thr Leu Ile 165
170 175Gln Arg Ser Asn Asp Met Leu Val Ala His His Ile
Asn Ala Met Gln 180 185 190Tyr
Val Ala Leu Gln Met Met Ile Ala Lys His Phe Ser Trp Lys Val 195
200 205Gly Lys Phe Phe Tyr Phe Val Asn Asn
Leu His Ile Tyr Asp Asn Gln 210 215
220Phe Glu Gln Ala Asn Glu Leu Met Lys Arg Thr Ala Ser Glu Lys Glu225
230 235 240Pro Arg Leu Val
Leu Asn Val Pro Asp Gly Thr Asn Phe Phe Asp Ile 245
250 255Lys Pro Glu Asp Phe Glu Leu Val Asp Tyr
Glu Pro Val Lys Pro Gln 260 265
270Leu Lys Phe Asp Leu Ala Ile 27571000DNALactococcus lactis
7atatacaatt gagcaaaaga aatttagtta ttaaattacc agctggagtt cctccaatgg
60ttgtagattc actaagtcca gcaattattt caatggtgat tttctgtttg atgttcggga
120ttcgtgtggg attctcttat acgccattcc atgatatttt caatttctca acacaactaa
180ttcaagcacc gttgactggt gctgtggcaa atccatgggt tcttatgggc atctttacct
240ttggtaattt cttatggttc tttggtatcc accctaattt aattggggga attttaaatc
300cattgttatt aacaatgtca tatgctaata ttgatgccta tgctgccgga aaacctgtac
360catacttaca aatgatgatt gtgtttgctg tgggtgcgaa cgcatggggc ggaagtggaa
420atacttatgg gttagttatt tcaatgttta cggcaaaatc tgaacgctat aaacaattat
480taaaattagg tgcaattcct agtattttca atatcagtga accattactt tttggtcttc
540caatgatgtt aaatcctctt ttctttattc ctttggtttt ccaaccagca attttaggaa
600ctgtagcatt gggcttggca aagatattat atattacaaa tctgaatcca atgacggcac
660ttcttccttg gacgacacca gcacctgtga gaatggccat ttcaggtgga cttccatttt
720tgattatttt tgcaatctgt ttagtcttga atgttcttat ttactaccca ttctttaagg
780tggcgtataa taaagcttta gaagaagaaa aagcagctgt tgaattagag ggttcagaaa
840ctgcctgatg gatatttttt ataaatctgg tttgaacaaa ttatattgac atctcttttt
900ctatcctgat aattctgaga ggttattttg ggaaatacta ttgaaccata tcgaggtggt
960gtggtataat gaagggaatt aaaaaagata ggaaaatttc
1000824DNAArtificial Sequenceoligonucleotide primer 8atgacttacg
cagatcaagt tttt
24927DNAArtificial Sequenceoligonucleotide primer 9ttaaattgct aaatcaaatt
tcaattg 271020DNAArtificial
Sequenceoligonucleotide primer 10tctgattgag taccttgacc
201122DNAArtificial Sequenceoligonucleotide
primer 11gcaatcataa ttggttttat tg
221222DNAArtificial Sequenceoligonucleotide primer 12cttacatgac
tatgaaaatc cg
221323DNAArtificial Sequenceoligonucleotide primer 13cttttttatt
attagggaaa gca
231421DNAArtificial Sequenceexpression unit comprising the lactococcal P1
promoter, the E.col i bacteriophage T7 expression signals,
putative RNA stabilisingsequence and modified gene10 ribosomal
binding site 14gattaagtca tcttacctct t
211539DNAArtificial SequencethyA-, P1-T7-usp45-hIL10
15agataggaaa atttcatgga ttaagtcatc ttacctctt
391636DNAArtificial SequenceATG not included, thyA-,P1-T7-usp45-hIL10
16agataggaaa atttcgatta agtcatctta cctctt
361748DNAArtificial SequencethyA promoter not included, theA-,
P1-T7-usp45-hIL10 17tctgagaggt tattttggga aatactagat taagtcatct tacctctt
481840DNAArtificial SequencethyA-, usp45-hIL10
18aaaatccgta actaactaga attaatctat aagttactga
40196967DNALactococcus lactismisc_featureThy11 19attaacagcc ttttgagcag
ctagctcatt attttgaaat aaatcataaa tttctttccc 60actatctgat ttatgattgc
tagcatattt gttgtataat cgaacgagtc cattttgaac 120agatccatat agattgagtg
aactataaaa tacatctata tcatagttga gtttgttcac 180aatcatgaga ccaaattctc
cagcatttcg tgtagaacca cgataaagct gtttatttag 240caaaatggca cctccgacac
ctgtacctaa agtcatgcaa ataaaatttt ggctttcttg 300tccattccct agccaaagtt
cagctagacc tgcacaattg gcatcatttt caacataaac 360cggaagattt aaatgttttt
gtagttctgt ccccaatgga tagccataaa gatcagttag 420agctcctgcc agtaataatg
ttcccttttt gtcagaagtt ccgggaacac ttacaccaat 480tgcagatact gaatgatgag
cttttaactg atgaatattt gtgagcaagc tatccataat 540tttttctttt tttaatgggg
ttggaacttg taaatgttgt atgatcgttc catcactagt 600tacaagacca aattttataa
atgtaccacc gatatcaatt cctattgaat aatgcatctt 660ttattacctc tttctctaat
ttgttttagt atagcaaaat caaaaaatta attatggtat 720gcattataga tatgttgtat
aattttcaca aaaacggaga aaactatgaa aacaatagaa 780cagctcatga tagattcagc
agatttaatg tcagatttta ttcaattgac aatttttata 840ttccgcaagg aggattttca
acttttttat aggagtgatg aagaagagca agctttttca 900aggtaatgac tccaacttat
tgatagtgtt ttatgttcag ataatgcccg atgactttgt 960catgcagctc caccgatttt
gagaacgaca gcgacttccg tcccagccgt gccaggtgct 1020gcctcagatt caggttatgc
cgctcaattc gctgcgtata tcgcttgctg attacgtgca 1080gctttccctt caggcgggat
tcatacagcg gccagccatc cgtcatccat atcaccacgt 1140caaagggtga cagcaggctc
ataagacgcc ccagcgtcgc catagtgcgt tcaccgaata 1200cgtgcgcaac aaccgtcttc
cggagactgt catacgcgta aaacagccag cgctggcgcg 1260atttagcccc gacatagccc
cactgttcgt ccatttccgc gcagacgatg acgtcactgc 1320ccggctgtat gcgcgaggtt
accgactgcg gcctgagttt tttaagtgac gtaaaatcgt 1380gttgaggcca acgcccataa
tgcgggctgt tgcccggcat ccaacgccat tcatggccat 1440atcaatgatt ttctggtgcg
taccgggttg agaagcggtg taagtgaact gcagttgcca 1500tgttttacgg cagtgagagc
agagatagcg ctgatgtccg gcggtgcttt tgccgttacg 1560caccaccccg tcagtagctg
aacaggaggg acagctgata gaaacagaag ccactggagc 1620acctcaaaaa caccatcata
cactaaatca gtaagttggc agcatcaccc tttttcaaaa 1680gaaatcatcg ctcatttatc
tcagttgccc ttgaaggaag aggtgaattt attttatatg 1740cctaagataa aaggatatat
tacttatttt tctgtatttg gtaaagagga gtatcttcta 1800cttattttta aaggacaaga
aaaacttgca aataatcctt tccccgttga agtaaaacaa 1860ttattaaaaa gtggtatttt
actctatcaa atgatttttc aagaaaaatt agattatgaa 1920gaattatttg agaaaaatca
gcatattatt tctccattgc ttgctgctaa accaattgaa 1980tggaatgatt ccaatacgtg
aggaaagtaa attcccataa aacatatctt tttgaaaaat 2040atttggggga atgtgttatt
cgtggagatg ttgcagagtt aaaaaaagct ttttcaaatt 2100atatgaataa aggaactgct
ggaaaattat ctaataattc aatgcgacat aagaaaaaca 2160ttttgatttc agtcatcact
atgactactc gttcggctat acagggagga ttacctgaag 2220aagaagcttt tttgatgagt
gatttatata ttcaagagct tgaagaatta acggaattag 2280aagaaattag aacgcttgcc
tataatgtga tgatcgattt tgcagataaa gtgaaacagc 2340atcgatattg tcaggtttct
tataaaatat tatcttgtca aaagtatatt gttaatcatt 2400tatacgaaaa actaagtgtg
agtgaaattg cagaagagct acacatgaat atttcttatt 2460tatcttcaca attcaaaaaa
gagacagggc aaacaattac aaactttatt caggagaagc 2520gaatagaaga agctagagaa
ttaatccttt tctcagacta tcctttttca agaatttata 2580ccttgttggt tttactgcca
aagtcatttt ataaaaatat ttaaaaaata tactggaata 2640actcccaaaa agtttcaaga
tcagtatatt tatcatgcct ctacatcaat atatgattga 2700aattaaaaaa agacctagaa
tttcaaaatt gataaaatac atacctaaaa tattaattct 2760gtactattac gggtggagta
tctactgtat aatgagggta taaattatgg aagaagggag 2820taaaactaaa tttattgatg
gttttacgaa ttaattagga tatttttttt aaaaaccaaa 2880gaaaacgctt acaaacgtta
aaggagtgaa tctaaagatg gacaaatttg aaaaatggct 2940aaataagacc ttgatgccac
ttgcctcaaa aatgaataaa aatcatttca tttcggcatt 3000aagtgaagca tttatgagat
gtatgccctt aacattaggg attgcattat tgacaattat 3060aggatacttt ccagttcctg
cctgggtaga tttcttaaac tctattggac tggctcagca 3120tttttcagca gttattggtg
cagttaccag tgcgctagca atttatgtaa cttataattt 3180tgcttattct tatgtaaatc
gtcatgaata taatggccat acggccggtt tattatcaat 3240cgcaagtttg ttaatgctaa
tgccacaaat tattactgtc cctgtagtaa aaaacattcc 3300aaccgaattt ccgaaatccg
cggtagttga cagtgtgtca aatgttgaag catttcaaac 3360ggtatacacg ggtagcacag
gattaattgt agcaatcata attggtttta ttgtttcatt 3420agtctatata caattgagca
aaagaaattt agttattaaa ttaccagctg gagttcctcc 3480aatggttgta gattcactaa
gtccagcaat tatttcaatg gtgattttct gtttgatgtt 3540cgggattcgt gtgggattct
cttatacgcc attccatgat attttcaatt tctcaacaca 3600actaattcaa gcaccgttga
ctggtgctgt ggcaaatcca tgggttctta tgggcatctt 3660tacctttggt aatttcttat
ggttctttgg tatccaccct aatttaattg ggggaatttt 3720aaatccattg ttattaacaa
tgtcatatgc taatattgat gcctatgctg ccggaaaacc 3780tgtaccatac ttacaaatga
tgattgtgtt tgctgtgggt gcgaacgcat ggggcggaag 3840tggaaatact tatgggttag
ttatttcaat gtttacggca aaatctgaac gctataaaca 3900attattaaaa ttaggtgcaa
ttcctagtat tttcaatatc agtgaaccat tactttttgg 3960tcttccaatg atgttaaatc
ctcttttctt tattcctttg gttttccaac cagcaatttt 4020aggaactgta gcattgggct
tggcaaagat attatatatt acaaatctga atccaatgac 4080ggcacttctt ccttggacga
caccagcacc tgtgagaatg gccatttcag gtggacttcc 4140atttttgatt atttttgcaa
tctgtttagt cttgaatgtt cttatttact acccattctt 4200taaggtggcg tataataaag
ctttagaaga agaaaaagca gctgttgaat tagagggttc 4260agaaactgcc tgatggatat
tttttataaa tctggtttga acaaattata ttgacatctc 4320tttttctatc ctgataattc
tgagaggtta ttttgggaaa tactattgaa ccatatcgag 4380gtggtgtggt ataatgaagg
gaattaaaaa agataggaaa atttcatgga ttaagtcatc 4440ttacctcttt tattagtttt
ttcttataat ctaatgataa catttttata attaatctat 4500aaaccatatc cctctttgga
atcaaaattt attatctact cctttgtaga tatgttataa 4560tacaagtatc agatctggga
gaccacaacg gtttcccact agaaataatt ttgtttaact 4620ttagaaagga gatatacgca
tgaaaaaaaa gattatctca gctattttaa tgtctacagt 4680catactttct gctgcagccc
cgttgtcagg tgtttacgcc tcagctggtc aaggtactca 4740atcagaaaac tcatgtactc
actttccagg taacttgcca aacatgcttc gtgatttgcg 4800tgatgctttt tcacgtgtta
aaactttttt tcaaatgaaa gatcaacttg ataacttgct 4860tttgaaagaa tcacttttgg
aagattttaa aggttacctt ggttgtcaag ctttgtcaga 4920aatgatccaa ttttaccttg
aagaagttat gccacaagct gaaaaccaag atccagatat 4980caaagctcac gttaactcat
tgggtgaaaa ccttaaaact ttgcgtcttc gtttgcgtcg 5040ttgtcaccgt tttcttccat
gtgaaaacaa atcaaaagct gttgaacaag ttaaaaacgc 5100ttttaacaaa ttgcaagaaa
aaggtatcta caaagctatg tcagaatttg atatctttat 5160caactacatc gaagcttaca
tgactatgaa aatccgtaac taactagaat taatctataa 5220gttactgaca aaactgtcag
taactttttt tgtgggaaaa atgtattttt atgaccgtaa 5280agaatctgtc agtagaagtc
tgaaattcgt ttaaaaatcg actagaatag gctttaacga 5340caagatgttt taaagagtac
gctctaaatg tatttttgta tttttgtttg attacgaagt 5400ttaaatttaa ttgacaaatg
ttttaaaatg agtataatag gacttgtaac cgattttatt 5460tttataaagg agaaagaaag
atgaacaaac ttttacttgg aacagccttt ataggggcta 5520gcttactgat tggtgggggt
gctcatgcag atcaaatgtt tatcgtttgt ataatcataa 5580tactggtgag cactctatac
aactagtggg acaccaaaag aatgctaatg taagtgcggg 5640ttggacttat gaaggtgtcg
gttggatcgc accaacaaca agttcaagcc cagtttaccg 5700tgtgtacaat ccaaatgcat
tattacacaa aaagcaagta tgaagcccaa agtttagtaa 5760ataagggttg gaaatgggat
aataacggaa aggcggtctt ctattctgga ggttctcaag 5820ccgtatatgt cgcttataat
cccaatgcac aatctggcgc tcacaattac acggaaagta 5880gctttgagca aaatagctta
ttgaatactg gttggaaata tggggcagta gcttggtacg 5940ggattggagt aaaaaacgaa
atgttaaaca ttgctcaaat tgttagtggt aatttttcta 6000gtattgttgg aacttggaaa
gatacttctg gaaatatgct tgaaattaat gcaatgggaa 6060atcttacttt aatatggaaa
ggggcaaaga atcaaacctt tgaacttggc gcaggtcaac 6120aatttaatgg aactgcagat
attgccttaa aaaatggaga gatttcccct ggtagtccac 6180ttaacatttt tgttgtacca
acagaagttg ctttccctaa taataaaaaa gtagacgatt 6240caactgggca acaacgaatt
tttgtgaatt attctggtac aagccctcaa atggcgaata 6300gtatggcagc ggtggctttt
tttagagtta ttccatgatt atattaaagt tagaattgaa 6360taaaatgtat tattaaaaag
ataatattat atcacgacaa ggcgacatct atcaacttta 6420ccactggtat ggaagtgacc
attattacat caggaaacgc taaaacggtt gtttttacac 6480ccgtaaaata aataataaaa
taatgtgaaa ttactgacag cattttgtca gtaatttttt 6540ttatcaaaat cacacaaaaa
tgttcgttga cgaacaaaaa aaactatgtt ataataattc 6600gtatgcgaac taaaaaagaa
gcgattggcc gacttttaaa agtagccagc aaccaaatgt 6660ctcgagaatt tgataatttt
gcagctcaac ttgatttgac aggtcagcaa atgtcaattt 6720tagattttct tggaaatcaa
agcgaagaag gttcaggaaa agaaattagt cagacgatga 6780ttgaattaga atttaatatc
cgacgttcaa caacgacgga aattttacag cgcatggaaa 6840agcggctttt aattaatcga
agaacaagcc tgaccgatgc ccgccaaaaa tcagttgaat 6900taactgaaga agggaaaaga
tatttacctg aaatcagggc ttatatccaa gcacataata 6960aaaaagc
6967206753DNALactococcus
lactismisc_featureThy12 20attaacagcc ttttgagcag ctagctcatt attttgaaat
aaatcataaa tttctttccc 60actatctgat ttatgattgc tagcatattt gttgtataat
cgaacgagtc cattttgaac 120agatccatat agattgagtg aactataaaa tacatctata
tcatagttga gtttgttcac 180aatcatgaga ccaaattctc cagcatttcg tgtagaacca
cgataaagct gtttatttag 240caaaatggca cctccgacac ctgtacctaa agtcatgcaa
ataaaatttt ggctttcttg 300tccattccct agccaaagtt cagctagacc tgcacaattg
gcatcatttt caacataaac 360cggaagattt aaatgttttt gtagttctgt ccccaatgga
tagccataaa gatcagttag 420agctcctgcc agtaataatg ttcccttttt gtcagaagtt
ccgggaacac ttacaccaat 480tgcagatact gaatgatgag cttttaactg atgaatattt
gtgagcaagc tatccataat 540tttttctttt tttaatgggg ttggaacttg taaatgttgt
atgatcgttc catcactagt 600tacaagacca aattttataa atgtaccacc gatatcaatt
cctattgaat aatgcatctt 660ttattacctc tttctctaat ttgttttagt atagcaaaat
caaaaaatta attatggtat 720gcattataga tatgttgtat aattttcaca aaaacggaga
aaactatgaa aacaatagaa 780cagctcatga tagattcagc agatttaatg tcagatttta
ttcaattgac aatttttata 840ttccgcaagg aggattttca acttttttat aggagtgatg
aagaagagca agctttttca 900aggtaatgac tccaacttat tgatagtgtt ttatgttcag
ataatgcccg atgactttgt 960catgcagctc caccgatttt gagaacgaca gcgacttccg
tcccagccgt gccaggtgct 1020gcctcagatt caggttatgc cgctcaattc gctgcgtata
tcgcttgctg attacgtgca 1080gctttccctt caggcgggat tcatacagcg gccagccatc
cgtcatccat atcaccacgt 1140caaagggtga cagcaggctc ataagacgcc ccagcgtcgc
catagtgcgt tcaccgaata 1200cgtgcgcaac aaccgtcttc cggagactgt catacgcgta
aaacagccag cgctggcgcg 1260atttagcccc gacatagccc cactgttcgt ccatttccgc
gcagacgatg acgtcactgc 1320ccggctgtat gcgcgaggtt accgactgcg gcctgagttt
tttaagtgac gtaaaatcgt 1380gttgaggcca acgcccataa tgcgggctgt tgcccggcat
ccaacgccat tcatggccat 1440atcaatgatt ttctggtgcg taccgggttg agaagcggtg
taagtgaact gcagttgcca 1500tgttttacgg cagtgagagc agagatagcg ctgatgtccg
gcggtgcttt tgccgttacg 1560caccaccccg tcagtagctg aacaggaggg acagctgata
gaaacagaag ccactggagc 1620acctcaaaaa caccatcata cactaaatca gtaagttggc
agcatcaccc tttttcaaaa 1680gaaatcatcg ctcatttatc tcagttgccc ttgaaggaag
aggtgaattt attttatatg 1740cctaagataa aaggatatat tacttatttt tctgtatttg
gtaaagagga gtatcttcta 1800cttattttta aaggacaaga aaaacttgca aataatcctt
tccccgttga agtaaaacaa 1860ttattaaaaa gtggtatttt actctatcaa atgatttttc
aagaaaaatt agattatgaa 1920gaattatttg agaaaaatca gcatattatt tctccattgc
ttgctgctaa accaattgaa 1980tggaatgatt ccaatacgtg aggaaagtaa attcccataa
aacatatctt tttgaaaaat 2040atttggggga atgtgttatt cgtggagatg ttgcagagtt
aaaaaaagct ttttcaaatt 2100atatgaataa aggaactgct ggaaaattat ctaataattc
aatgcgacat aagaaaaaca 2160ttttgatttc agtcatcact atgactactc gttcggctat
acagggagga ttacctgaag 2220aagaagcttt tttgatgagt gatttatata ttcaagagct
tgaagaatta acggaattag 2280aagaaattag aacgcttgcc tataatgtga tgatcgattt
tgcagataaa gtgaaacagc 2340atcgatattg tcaggtttct tataaaatat tatcttgtca
aaagtatatt gttaatcatt 2400tatacgaaaa actaagtgtg agtgaaattg cagaagagct
acacatgaat atttcttatt 2460tatcttcaca attcaaaaaa gagacagggc aaacaattac
aaactttatt caggagaagc 2520gaatagaaga agctagagaa ttaatccttt tctcagacta
tcctttttca agaatttata 2580ccttgttggt tttactgcca aagtcatttt ataaaaatat
ttaaaaaata tactggaata 2640actcccaaaa agtttcaaga tcagtatatt tatcatgcct
ctacatcaat atatgattga 2700aattaaaaaa agacctagaa tttcaaaatt gataaaatac
atacctaaaa tattaattct 2760gtactattac gggtggagta tctactgtat aatgagggta
taaattatgg aagaagggag 2820taaaactaaa tttattgatg gttttacgaa ttaattagga
tatttttttt aaaaaccaaa 2880gaaaacgctt acaaacgtta aaggagtgaa tctaaagatg
gacaaatttg aaaaatggct 2940aaataagacc ttgatgccac ttgcctcaaa aatgaataaa
aatcatttca tttcggcatt 3000aagtgaagca tttatgagat gtatgccctt aacattaggg
attgcattat tgacaattat 3060aggatacttt ccagttcctg cctgggtaga tttcttaaac
tctattggac tggctcagca 3120tttttcagca gttattggtg cagttaccag tgcgctagca
atttatgtaa cttataattt 3180tgcttattct tatgtaaatc gtcatgaata taatggccat
acggccggtt tattatcaat 3240cgcaagtttg ttaatgctaa tgccacaaat tattactgtc
cctgtagtaa aaaacattcc 3300aaccgaattt ccgaaatccg cggtagttga cagtgtgtca
aatgttgaag catttcaaac 3360ggtatacacg ggtagcacag gattaattgt agcaatcata
attggtttta ttgtttcatt 3420agtctatata caattgagca aaagaaattt agttattaaa
ttaccagctg gagttcctcc 3480aatggttgta gattcactaa gtccagcaat tatttcaatg
gtgattttct gtttgatgtt 3540cgggattcgt gtgggattct cttatacgcc attccatgat
attttcaatt tctcaacaca 3600actaattcaa gcaccgttga ctggtgctgt ggcaaatcca
tgggttctta tgggcatctt 3660tacctttggt aatttcttat ggttctttgg tatccaccct
aatttaattg ggggaatttt 3720aaatccattg ttattaacaa tgtcatatgc taatattgat
gcctatgctg ccggaaaacc 3780tgtaccatac ttacaaatga tgattgtgtt tgctgtgggt
gcgaacgcat ggggcggaag 3840tggaaatact tatgggttag ttatttcaat gtttacggca
aaatctgaac gctataaaca 3900attattaaaa ttaggtgcaa ttcctagtat tttcaatatc
agtgaaccat tactttttgg 3960tcttccaatg atgttaaatc ctcttttctt tattcctttg
gttttccaac cagcaatttt 4020aggaactgta gcattgggct tggcaaagat attatatatt
acaaatctga atccaatgac 4080ggcacttctt ccttggacga caccagcacc tgtgagaatg
gccatttcag gtggacttcc 4140atttttgatt atttttgcaa tctgtttagt cttgaatgtt
cttatttact acccattctt 4200taaggtggcg tataataaag ctttagaaga agaaaaagca
gctgttgaat tagagggttc 4260agaaactgcc tgatggatat tttttataaa tctggtttga
acaaattata ttgacatctc 4320tttttctatc ctgataattc tgagaggtta ttttgggaaa
tactattgaa ccatatcgag 4380gtggtgtggt ataatgaagg gaattaaaaa agataggaaa
atttcatgaa aaaaaagatt 4440atctcagcta ttttaatgtc tacagtcata ctttctgctg
cagccccgtt gtcaggtgtt 4500tacgcctcag ctggtcaagg tactcaatca gaaaactcat
gtactcactt tccaggtaac 4560ttgccaaaca tgcttcgtga tttgcgtgat gctttttcac
gtgttaaaac tttttttcaa 4620atgaaagatc aacttgataa cttgcttttg aaagaatcac
ttttggaaga ttttaaaggt 4680taccttggtt gtcaagcttt gtcagaaatg atccaatttt
accttgaaga agttatgcca 4740caagctgaaa accaagatcc agatatcaaa gctcacgtta
actcattggg tgaaaacctt 4800aaaactttgc gtcttcgttt gcgtcgttgt caccgttttc
ttccatgtga aaacaaatca 4860aaagctgttg aacaagttaa aaacgctttt aacaaattgc
aagaaaaagg tatctacaaa 4920gctatgtcag aatttgatat ctttatcaac tacatcgaag
cttacatgac tatgaaaatc 4980cgtaactaac tagaattaat ctataagtta ctgacaaaac
tgtcagtaac tttttttgtg 5040ggaaaaatgt atttttatga ccgtaaagaa tctgtcagta
gaagtctgaa attcgtttaa 5100aaatcgacta gaataggctt taacgacaag atgttttaaa
gagtacgctc taaatgtatt 5160tttgtatttt tgtttgatta cgaagtttaa atttaattga
caaatgtttt aaaatgagta 5220taataggact tgtaaccgat tttattttta taaaggagaa
agaaagatga acaaactttt 5280acttggaaca gcctttatag gggctagctt actgattggt
gggggtgctc atgcagatca 5340aatgtttatc gtttgtataa tcataatact ggtgagcact
ctatacaact agtgggacac 5400caaaagaatg ctaatgtaag tgcgggttgg acttatgaag
gtgtcggttg gatcgcacca 5460acaacaagtt caagcccagt ttaccgtgtg tacaatccaa
atgcattatt acacaaaaag 5520caagtatgaa gcccaaagtt tagtaaataa gggttggaaa
tgggataata acggaaaggc 5580ggtcttctat tctggaggtt ctcaagccgt atatgtcgct
tataatccca atgcacaatc 5640tggcgctcac aattacacgg aaagtagctt tgagcaaaat
agcttattga atactggttg 5700gaaatatggg gcagtagctt ggtacgggat tggagtaaaa
aacgaaatgt taaacattgc 5760tcaaattgtt agtggtaatt tttctagtat tgttggaact
tggaaagata cttctggaaa 5820tatgcttgaa attaatgcaa tgggaaatct tactttaata
tggaaagggg caaagaatca 5880aacctttgaa cttggcgcag gtcaacaatt taatggaact
gcagatattg ccttaaaaaa 5940tggagagatt tcccctggta gtccacttaa catttttgtt
gtaccaacag aagttgcttt 6000ccctaataat aaaaaagtag acgattcaac tgggcaacaa
cgaatttttg tgaattattc 6060tggtacaagc cctcaaatgg cgaatagtat ggcagcggtg
gcttttttta gagttattcc 6120atgattatat taaagttaga attgaataaa atgtattatt
aaaaagataa tattatatca 6180cgacaaggcg acatctatca actttaccac tggtatggaa
gtgaccatta ttacatcagg 6240aaacgctaaa acggttgttt ttacacccgt aaaataaata
ataaaataat gtgaaattac 6300tgacagcatt ttgtcagtaa ttttttttat caaaatcaca
caaaaatgtt cgttgacgaa 6360caaaaaaaac tatgttataa taattcgtat gcgaactaaa
aaagaagcga ttggccgact 6420tttaaaagta gccagcaacc aaatgtctcg agaatttgat
aattttgcag ctcaacttga 6480tttgacaggt cagcaaatgt caattttaga ttttcttgga
aatcaaagcg aagaaggttc 6540aggaaaagaa attagtcaga cgatgattga attagaattt
aatatccgac gttcaacaac 6600gacggaaatt ttacagcgca tggaaaagcg gcttttaatt
aatcgaagaa caagcctgac 6660cgatgcccgc caaaaatcag ttgaattaac tgaagaaggg
aaaagatatt tacctgaaat 6720cagggcttat atccaagcac ataataaaaa agc
6753216904DNALactococcus lactismisc_featureThy15
21attaacagcc ttttgagcag ctagctcatt attttgaaat aaatcataaa tttctttccc
60actatctgat ttatgattgc tagcatattt gttgtataat cgaacgagtc cattttgaac
120agatccatat agattgagtg aactataaaa tacatctata tcatagttga gtttgttcac
180aatcatgaga ccaaattctc cagcatttcg tgtagaacca cgataaagct gtttatttag
240caaaatggca cctccgacac ctgtacctaa agtcatgcaa ataaaatttt ggctttcttg
300tccattccct agccaaagtt cagctagacc tgcacaattg gcatcatttt caacataaac
360cggaagattt aaatgttttt gtagttctgt ccccaatgga tagccataaa gatcagttag
420agctcctgcc agtaataatg ttcccttttt gtcagaagtt ccgggaacac ttacaccaat
480tgcagatact gaatgatgag cttttaactg atgaatattt gtgagcaagc tatccataat
540tttttctttt tttaatgggg ttggaacttg taaatgttgt atgatcgttc catcactagt
600tacaagacca aattttataa atgtaccacc gatatcaatt cctattgaat aatgcatctt
660ttattacctc tttctctaat ttgttttagt atagcaaaat caaaaaatta attatggtat
720gcattataga tatgttgtat aattttcaca aaaacggaga aaactatgaa aacaatagaa
780cagctcatga tagattcagc agatttaatg tcagatttta ttcaattgac aatttttata
840ttccgcaagg aggattttca acttttttat aggagtgatg aagaagagca agctttttca
900aggtaatgac tccaacttat tgatagtgtt ttatgttcag ataatgcccg atgactttgt
960catgcagctc caccgatttt gagaacgaca gcgacttccg tcccagccgt gccaggtgct
1020gcctcagatt caggttatgc cgctcaattc gctgcgtata tcgcttgctg attacgtgca
1080gctttccctt caggcgggat tcatacagcg gccagccatc cgtcatccat atcaccacgt
1140caaagggtga cagcaggctc ataagacgcc ccagcgtcgc catagtgcgt tcaccgaata
1200cgtgcgcaac aaccgtcttc cggagactgt catacgcgta aaacagccag cgctggcgcg
1260atttagcccc gacatagccc cactgttcgt ccatttccgc gcagacgatg acgtcactgc
1320ccggctgtat gcgcgaggtt accgactgcg gcctgagttt tttaagtgac gtaaaatcgt
1380gttgaggcca acgcccataa tgcgggctgt tgcccggcat ccaacgccat tcatggccat
1440atcaatgatt ttctggtgcg taccgggttg agaagcggtg taagtgaact gcagttgcca
1500tgttttacgg cagtgagagc agagatagcg ctgatgtccg gcggtgcttt tgccgttacg
1560caccaccccg tcagtagctg aacaggaggg acagctgata gaaacagaag ccactggagc
1620acctcaaaaa caccatcata cactaaatca gtaagttggc agcatcaccc tttttcaaaa
1680gaaatcatcg ctcatttatc tcagttgccc ttgaaggaag aggtgaattt attttatatg
1740cctaagataa aaggatatat tacttatttt tctgtatttg gtaaagagga gtatcttcta
1800cttattttta aaggacaaga aaaacttgca aataatcctt tccccgttga agtaaaacaa
1860ttattaaaaa gtggtatttt actctatcaa atgatttttc aagaaaaatt agattatgaa
1920gaattatttg agaaaaatca gcatattatt tctccattgc ttgctgctaa accaattgaa
1980tggaatgatt ccaatacgtg aggaaagtaa attcccataa aacatatctt tttgaaaaat
2040atttggggga atgtgttatt cgtggagatg ttgcagagtt aaaaaaagct ttttcaaatt
2100atatgaataa aggaactgct ggaaaattat ctaataattc aatgcgacat aagaaaaaca
2160ttttgatttc agtcatcact atgactactc gttcggctat acagggagga ttacctgaag
2220aagaagcttt tttgatgagt gatttatata ttcaagagct tgaagaatta acggaattag
2280aagaaattag aacgcttgcc tataatgtga tgatcgattt tgcagataaa gtgaaacagc
2340atcgatattg tcaggtttct tataaaatat tatcttgtca aaagtatatt gttaatcatt
2400tatacgaaaa actaagtgtg agtgaaattg cagaagagct acacatgaat atttcttatt
2460tatcttcaca attcaaaaaa gagacagggc aaacaattac aaactttatt caggagaagc
2520gaatagaaga agctagagaa ttaatccttt tctcagacta tcctttttca agaatttata
2580ccttgttggt tttactgcca aagtcatttt ataaaaatat ttaaaaaata tactggaata
2640actcccaaaa agtttcaaga tcagtatatt tatcatgcct ctacatcaat atatgattga
2700aattaaaaaa agacctagaa tttcaaaatt gataaaatac atacctaaaa tattaattct
2760gtactattac gggtggagta tctactgtat aatgagggta taaattatgg aagaagggag
2820taaaactaaa tttattgatg gttttacgaa ttaattagga tatttttttt aaaaaccaaa
2880gaaaacgctt acaaacgtta aaggagtgaa tctaaagatg gacaaatttg aaaaatggct
2940aaataagacc ttgatgccac ttgcctcaaa aatgaataaa aatcatttca tttcggcatt
3000aagtgaagca tttatgagat gtatgccctt aacattaggg attgcattat tgacaattat
3060aggatacttt ccagttcctg cctgggtaga tttcttaaac tctattggac tggctcagca
3120tttttcagca gttattggtg cagttaccag tgcgctagca atttatgtaa cttataattt
3180tgcttattct tatgtaaatc gtcatgaata taatggccat acggccggtt tattatcaat
3240cgcaagtttg ttaatgctaa tgccacaaat tattactgtc cctgtagtaa aaaacattcc
3300aaccgaattt ccgaaatccg cggtagttga cagtgtgtca aatgttgaag catttcaaac
3360ggtatacacg ggtagcacag gattaattgt agcaatcata attggtttta ttgtttcatt
3420agtctatata caattgagca aaagaaattt agttattaaa ttaccagctg gagttcctcc
3480aatggttgta gattcactaa gtccagcaat tatttcaatg gtgattttct gtttgatgtt
3540cgggattcgt gtgggattct cttatacgcc attccatgat attttcaatt tctcaacaca
3600actaattcaa gcaccgttga ctggtgctgt ggcaaatcca tgggttctta tgggcatctt
3660tacctttggt aatttcttat ggttctttgg tatccaccct aatttaattg ggggaatttt
3720aaatccattg ttattaacaa tgtcatatgc taatattgat gcctatgctg ccggaaaacc
3780tgtaccatac ttacaaatga tgattgtgtt tgctgtgggt gcgaacgcat ggggcggaag
3840tggaaatact tatgggttag ttatttcaat gtttacggca aaatctgaac gctataaaca
3900attattaaaa ttaggtgcaa ttcctagtat tttcaatatc agtgaaccat tactttttgg
3960tcttccaatg atgttaaatc ctcttttctt tattcctttg gttttccaac cagcaatttt
4020aggaactgta gcattgggct tggcaaagat attatatatt acaaatctga atccaatgac
4080ggcacttctt ccttggacga caccagcacc tgtgagaatg gccatttcag gtggacttcc
4140atttttgatt atttttgcaa tctgtttagt cttgaatgtt cttatttact acccattctt
4200taaggtggcg tataataaag ctttagaaga agaaaaagca gctgttgaat tagagggttc
4260agaaactgcc tgatggatat tttttataaa tctggtttga acaaattata ttgacatctc
4320tttttctatc ctgataattc tgagaggtta ttttgggaaa tactagatta agtcatctta
4380cctcttttat tagttttttc ttataatcta atgataacat ttttataatt aatctataaa
4440ccatatccct ctttggaatc aaaatttatt atctactcct ttgtagatat gttataatac
4500aagtatcaga tctgggagac cacaacggtt tcccactaga aataattttg tttaacttta
4560gaaaggagat atacgcatga aaaaaaagat tatctcagct attttaatgt ctacagtcat
4620actttctgct gcagccccgt tgtcaggtgt ttacgcctca gctggtcaag gtactcaatc
4680agaaaactca tgtactcact ttccaggtaa cttgccaaac atgcttcgtg atttgcgtga
4740tgctttttca cgtgttaaaa ctttttttca aatgaaagat caacttgata acttgctttt
4800gaaagaatca cttttggaag attttaaagg ttaccttggt tgtcaagctt tgtcagaaat
4860gatccaattt taccttgaag aagttatgcc acaagctgaa aaccaagatc cagatatcaa
4920agctcacgtt aactcattgg gtgaaaacct taaaactttg cgtcttcgtt tgcgtcgttg
4980tcaccgtttt cttccatgtg aaaacaaatc aaaagctgtt gaacaagtta aaaacgcttt
5040taacaaattg caagaaaaag gtatctacaa agctatgtca gaatttgata tctttatcaa
5100ctacatcgaa gcttacatga ctatgaaaat ccgtaactaa ctagaattaa tctataagtt
5160actgacaaaa ctgtcagtaa ctttttttgt gggaaaaatg tatttttatg accgtaaaga
5220atctgtcagt agaagtctga aattcgttta aaaatcgact agaataggct ttaacgacaa
5280gatgttttaa agagtacgct ctaaatgtat ttttgtattt ttgtttgatt acgaagttta
5340aatttaattg acaaatgttt taaaatgagt ataataggac ttgtaaccga ttttattttt
5400ataaaggaga aagaaagatg aacaaacttt tacttggaac agcctttata ggggctagct
5460tactgattgg tgggggtgct catgcagatc aaatgtttat cgtttgtata atcataatac
5520tggtgagcac tctatacaac tagtgggaca ccaaaagaat gctaatgtaa gtgcgggttg
5580gacttatgaa ggtgtcggtt ggatcgcacc aacaacaagt tcaagcccag tttaccgtgt
5640gtacaatcca aatgcattat tacacaaaaa gcaagtatga agcccaaagt ttagtaaata
5700agggttggaa atgggataat aacggaaagg cggtcttcta ttctggaggt tctcaagccg
5760tatatgtcgc ttataatccc aatgcacaat ctggcgctca caattacacg gaaagtagct
5820ttgagcaaaa tagcttattg aatactggtt ggaaatatgg ggcagtagct tggtacggga
5880ttggagtaaa aaacgaaatg ttaaacattg ctcaaattgt tagtggtaat ttttctagta
5940ttgttggaac ttggaaagat acttctggaa atatgcttga aattaatgca atgggaaatc
6000ttactttaat atggaaaggg gcaaagaatc aaacctttga acttggcgca ggtcaacaat
6060ttaatggaac tgcagatatt gccttaaaaa atggagagat ttcccctggt agtccactta
6120acatttttgt tgtaccaaca gaagttgctt tccctaataa taaaaaagta gacgattcaa
6180ctgggcaaca acgaattttt gtgaattatt ctggtacaag ccctcaaatg gcgaatagta
6240tggcagcggt ggcttttttt agagttattc catgattata ttaaagttag aattgaataa
6300aatgtattat taaaaagata atattatatc acgacaaggc gacatctatc aactttacca
6360ctggtatgga agtgaccatt attacatcag gaaacgctaa aacggttgtt tttacacccg
6420taaaataaat aataaaataa tgtgaaatta ctgacagcat tttgtcagta atttttttta
6480tcaaaatcac acaaaaatgt tcgttgacga acaaaaaaaa ctatgttata ataattcgta
6540tgcgaactaa aaaagaagcg attggccgac ttttaaaagt agccagcaac caaatgtctc
6600gagaatttga taattttgca gctcaacttg atttgacagg tcagcaaatg tcaattttag
6660attttcttgg aaatcaaagc gaagaaggtt caggaaaaga aattagtcag acgatgattg
6720aattagaatt taatatccga cgttcaacaa cgacggaaat tttacagcgc atggaaaagc
6780ggcttttaat taatcgaaga acaagcctga ccgatgcccg ccaaaaatca gttgaattaa
6840ctgaagaagg gaaaagatat ttacctgaaa tcagggctta tatccaagca cataataaaa
6900aagc
6904226964DNALactococcus lactismisc_featureThy16 22attaacagcc ttttgagcag
ctagctcatt attttgaaat aaatcataaa tttctttccc 60actatctgat ttatgattgc
tagcatattt gttgtataat cgaacgagtc cattttgaac 120agatccatat agattgagtg
aactataaaa tacatctata tcatagttga gtttgttcac 180aatcatgaga ccaaattctc
cagcatttcg tgtagaacca cgataaagct gtttatttag 240caaaatggca cctccgacac
ctgtacctaa agtcatgcaa ataaaatttt ggctttcttg 300tccattccct agccaaagtt
cagctagacc tgcacaattg gcatcatttt caacataaac 360cggaagattt aaatgttttt
gtagttctgt ccccaatgga tagccataaa gatcagttag 420agctcctgcc agtaataatg
ttcccttttt gtcagaagtt ccgggaacac ttacaccaat 480tgcagatact gaatgatgag
cttttaactg atgaatattt gtgagcaagc tatccataat 540tttttctttt tttaatgggg
ttggaacttg taaatgttgt atgatcgttc catcactagt 600tacaagacca aattttataa
atgtaccacc gatatcaatt cctattgaat aatgcatctt 660ttattacctc tttctctaat
ttgttttagt atagcaaaat caaaaaatta attatggtat 720gcattataga tatgttgtat
aattttcaca aaaacggaga aaactatgaa aacaatagaa 780cagctcatga tagattcagc
agatttaatg tcagatttta ttcaattgac aatttttata 840ttccgcaagg aggattttca
acttttttat aggagtgatg aagaagagca agctttttca 900aggtaatgac tccaacttat
tgatagtgtt ttatgttcag ataatgcccg atgactttgt 960catgcagctc caccgatttt
gagaacgaca gcgacttccg tcccagccgt gccaggtgct 1020gcctcagatt caggttatgc
cgctcaattc gctgcgtata tcgcttgctg attacgtgca 1080gctttccctt caggcgggat
tcatacagcg gccagccatc cgtcatccat atcaccacgt 1140caaagggtga cagcaggctc
ataagacgcc ccagcgtcgc catagtgcgt tcaccgaata 1200cgtgcgcaac aaccgtcttc
cggagactgt catacgcgta aaacagccag cgctggcgcg 1260atttagcccc gacatagccc
cactgttcgt ccatttccgc gcagacgatg acgtcactgc 1320ccggctgtat gcgcgaggtt
accgactgcg gcctgagttt tttaagtgac gtaaaatcgt 1380gttgaggcca acgcccataa
tgcgggctgt tgcccggcat ccaacgccat tcatggccat 1440atcaatgatt ttctggtgcg
taccgggttg agaagcggtg taagtgaact gcagttgcca 1500tgttttacgg cagtgagagc
agagatagcg ctgatgtccg gcggtgcttt tgccgttacg 1560caccaccccg tcagtagctg
aacaggaggg acagctgata gaaacagaag ccactggagc 1620acctcaaaaa caccatcata
cactaaatca gtaagttggc agcatcaccc tttttcaaaa 1680gaaatcatcg ctcatttatc
tcagttgccc ttgaaggaag aggtgaattt attttatatg 1740cctaagataa aaggatatat
tacttatttt tctgtatttg gtaaagagga gtatcttcta 1800cttattttta aaggacaaga
aaaacttgca aataatcctt tccccgttga agtaaaacaa 1860ttattaaaaa gtggtatttt
actctatcaa atgatttttc aagaaaaatt agattatgaa 1920gaattatttg agaaaaatca
gcatattatt tctccattgc ttgctgctaa accaattgaa 1980tggaatgatt ccaatacgtg
aggaaagtaa attcccataa aacatatctt tttgaaaaat 2040atttggggga atgtgttatt
cgtggagatg ttgcagagtt aaaaaaagct ttttcaaatt 2100atatgaataa aggaactgct
ggaaaattat ctaataattc aatgcgacat aagaaaaaca 2160ttttgatttc agtcatcact
atgactactc gttcggctat acagggagga ttacctgaag 2220aagaagcttt tttgatgagt
gatttatata ttcaagagct tgaagaatta acggaattag 2280aagaaattag aacgcttgcc
tataatgtga tgatcgattt tgcagataaa gtgaaacagc 2340atcgatattg tcaggtttct
tataaaatat tatcttgtca aaagtatatt gttaatcatt 2400tatacgaaaa actaagtgtg
agtgaaattg cagaagagct acacatgaat atttcttatt 2460tatcttcaca attcaaaaaa
gagacagggc aaacaattac aaactttatt caggagaagc 2520gaatagaaga agctagagaa
ttaatccttt tctcagacta tcctttttca agaatttata 2580ccttgttggt tttactgcca
aagtcatttt ataaaaatat ttaaaaaata tactggaata 2640actcccaaaa agtttcaaga
tcagtatatt tatcatgcct ctacatcaat atatgattga 2700aattaaaaaa agacctagaa
tttcaaaatt gataaaatac atacctaaaa tattaattct 2760gtactattac gggtggagta
tctactgtat aatgagggta taaattatgg aagaagggag 2820taaaactaaa tttattgatg
gttttacgaa ttaattagga tatttttttt aaaaaccaaa 2880gaaaacgctt acaaacgtta
aaggagtgaa tctaaagatg gacaaatttg aaaaatggct 2940aaataagacc ttgatgccac
ttgcctcaaa aatgaataaa aatcatttca tttcggcatt 3000aagtgaagca tttatgagat
gtatgccctt aacattaggg attgcattat tgacaattat 3060aggatacttt ccagttcctg
cctgggtaga tttcttaaac tctattggac tggctcagca 3120tttttcagca gttattggtg
cagttaccag tgcgctagca atttatgtaa cttataattt 3180tgcttattct tatgtaaatc
gtcatgaata taatggccat acggccggtt tattatcaat 3240cgcaagtttg ttaatgctaa
tgccacaaat tattactgtc cctgtagtaa aaaacattcc 3300aaccgaattt ccgaaatccg
cggtagttga cagtgtgtca aatgttgaag catttcaaac 3360ggtatacacg ggtagcacag
gattaattgt agcaatcata attggtttta ttgtttcatt 3420agtctatata caattgagca
aaagaaattt agttattaaa ttaccagctg gagttcctcc 3480aatggttgta gattcactaa
gtccagcaat tatttcaatg gtgattttct gtttgatgtt 3540cgggattcgt gtgggattct
cttatacgcc attccatgat attttcaatt tctcaacaca 3600actaattcaa gcaccgttga
ctggtgctgt ggcaaatcca tgggttctta tgggcatctt 3660tacctttggt aatttcttat
ggttctttgg tatccaccct aatttaattg ggggaatttt 3720aaatccattg ttattaacaa
tgtcatatgc taatattgat gcctatgctg ccggaaaacc 3780tgtaccatac ttacaaatga
tgattgtgtt tgctgtgggt gcgaacgcat ggggcggaag 3840tggaaatact tatgggttag
ttatttcaat gtttacggca aaatctgaac gctataaaca 3900attattaaaa ttaggtgcaa
ttcctagtat tttcaatatc agtgaaccat tactttttgg 3960tcttccaatg atgttaaatc
ctcttttctt tattcctttg gttttccaac cagcaatttt 4020aggaactgta gcattgggct
tggcaaagat attatatatt acaaatctga atccaatgac 4080ggcacttctt ccttggacga
caccagcacc tgtgagaatg gccatttcag gtggacttcc 4140atttttgatt atttttgcaa
tctgtttagt cttgaatgtt cttatttact acccattctt 4200taaggtggcg tataataaag
ctttagaaga agaaaaagca gctgttgaat tagagggttc 4260agaaactgcc tgatggatat
tttttataaa tctggtttga acaaattata ttgacatctc 4320tttttctatc ctgataattc
tgagaggtta ttttgggaaa tactattgaa ccatatcgag 4380gtggtgtggt ataatgaagg
gaattaaaaa agataggaaa atttcgatta agtcatctta 4440cctcttttat tagttttttc
ttataatcta atgataacat ttttataatt aatctataaa 4500ccatatccct ctttggaatc
aaaatttatt atctactcct ttgtagatat gttataatac 4560aagtatcaga tctgggagac
cacaacggtt tcccactaga aataattttg tttaacttta 4620gaaaggagat atacgcatga
aaaaaaagat tatctcagct attttaatgt ctacagtcat 4680actttctgct gcagccccgt
tgtcaggtgt ttacgcctca gctggtcaag gtactcaatc 4740agaaaactca tgtactcact
ttccaggtaa cttgccaaac atgcttcgtg atttgcgtga 4800tgctttttca cgtgttaaaa
ctttttttca aatgaaagat caacttgata acttgctttt 4860gaaagaatca cttttggaag
attttaaagg ttaccttggt tgtcaagctt tgtcagaaat 4920gatccaattt taccttgaag
aagttatgcc acaagctgaa aaccaagatc cagatatcaa 4980agctcacgtt aactcattgg
gtgaaaacct taaaactttg cgtcttcgtt tgcgtcgttg 5040tcaccgtttt cttccatgtg
aaaacaaatc aaaagctgtt gaacaagtta aaaacgcttt 5100taacaaattg caagaaaaag
gtatctacaa agctatgtca gaatttgata tctttatcaa 5160ctacatcgaa gcttacatga
ctatgaaaat ccgtaactaa ctagaattaa tctataagtt 5220actgacaaaa ctgtcagtaa
ctttttttgt gggaaaaatg tatttttatg accgtaaaga 5280atctgtcagt agaagtctga
aattcgttta aaaatcgact agaataggct ttaacgacaa 5340gatgttttaa agagtacgct
ctaaatgtat ttttgtattt ttgtttgatt acgaagttta 5400aatttaattg acaaatgttt
taaaatgagt ataataggac ttgtaaccga ttttattttt 5460ataaaggaga aagaaagatg
aacaaacttt tacttggaac agcctttata ggggctagct 5520tactgattgg tgggggtgct
catgcagatc aaatgtttat cgtttgtata atcataatac 5580tggtgagcac tctatacaac
tagtgggaca ccaaaagaat gctaatgtaa gtgcgggttg 5640gacttatgaa ggtgtcggtt
ggatcgcacc aacaacaagt tcaagcccag tttaccgtgt 5700gtacaatcca aatgcattat
tacacaaaaa gcaagtatga agcccaaagt ttagtaaata 5760agggttggaa atgggataat
aacggaaagg cggtcttcta ttctggaggt tctcaagccg 5820tatatgtcgc ttataatccc
aatgcacaat ctggcgctca caattacacg gaaagtagct 5880ttgagcaaaa tagcttattg
aatactggtt ggaaatatgg ggcagtagct tggtacggga 5940ttggagtaaa aaacgaaatg
ttaaacattg ctcaaattgt tagtggtaat ttttctagta 6000ttgttggaac ttggaaagat
acttctggaa atatgcttga aattaatgca atgggaaatc 6060ttactttaat atggaaaggg
gcaaagaatc aaacctttga acttggcgca ggtcaacaat 6120ttaatggaac tgcagatatt
gccttaaaaa atggagagat ttcccctggt agtccactta 6180acatttttgt tgtaccaaca
gaagttgctt tccctaataa taaaaaagta gacgattcaa 6240ctgggcaaca acgaattttt
gtgaattatt ctggtacaag ccctcaaatg gcgaatagta 6300tggcagcggt ggcttttttt
agagttattc catgattata ttaaagttag aattgaataa 6360aatgtattat taaaaagata
atattatatc acgacaaggc gacatctatc aactttacca 6420ctggtatgga agtgaccatt
attacatcag gaaacgctaa aacggttgtt tttacacccg 6480taaaataaat aataaaataa
tgtgaaatta ctgacagcat tttgtcagta atttttttta 6540tcaaaatcac acaaaaatgt
tcgttgacga acaaaaaaaa ctatgttata ataattcgta 6600tgcgaactaa aaaagaagcg
attggccgac ttttaaaagt agccagcaac caaatgtctc 6660gagaatttga taattttgca
gctcaacttg atttgacagg tcagcaaatg tcaattttag 6720attttcttgg aaatcaaagc
gaagaaggtt caggaaaaga aattagtcag acgatgattg 6780aattagaatt taatatccga
cgttcaacaa cgacggaaat tttacagcgc atggaaaagc 6840ggcttttaat taatcgaaga
acaagcctga ccgatgcccg ccaaaaatca gttgaattaa 6900ctgaagaagg gaaaagatat
ttacctgaaa tcagggctta tatccaagca cataataaaa 6960aagc
6964234998DNAArtificial
SequencepOThy11 23aatttcatgg attaagtcat cttacctctt ttattagttt tttcttataa
tctaatgata 60acatttttat aattaatcta taaaccatat ccctctttgg aatcaaaatt
tattatctac 120tcctttgtag atatgttata atacaagtat cagatctggg agaccacaac
ggtttcccac 180tagaaataat tttgtttaac tttagaaagg agatatacgc atgaaaaaaa
agattatctc 240agctatttta atgtctacag tcatactttc tgctgcagcc ccgttgtcag
gtgtttacgc 300ctcagctggt caaggtactc aatcagaaaa ctcatgtact cactttccag
gtaacttgcc 360aaacatgctt cgtgatttgc gtgatgcttt ttcacgtgtt aaaacttttt
ttcaaatgaa 420agatcaactt gataacttgc ttttgaaaga atcacttttg gaagatttta
aaggttacct 480tggttgtcaa gctttgtcag aaatgatcca attttacctt gaagaagtta
tgccacaagc 540tgaaaaccaa gatccagata tcaaagctca cgttaactca ttgggtgaaa
accttaaaac 600tttgcgtctt cgtttgcgtc gttgtcaccg ttttcttcca tgtgaaaaca
aatcaaaagc 660tgttgaacaa gttaaaaacg cttttaacaa attgcaagaa aaaggtatct
acaaagctat 720gtcagaattt gatatcttta tcaactacat cgaagcttac atgactatga
aaatccgtaa 780ctaactagaa ttaatctata agttactgac aaaactgtca gtaacttttt
ttgtgggaaa 840aatgtatttt tatgaccgta aagaatctgt cagtagaagt ctgaaattcg
tttaaaaatc 900gactagaata ggctttaacg acaagatgtt ttaaagagta cgctctaaat
gtatttttgt 960atttttgttt gattacgaag tttaaattta attgacaaat gttttaaaat
gagtataata 1020ggacttgtaa ccgattttat ttttataaag gagaaagaaa gatgaacaaa
cttttacttg 1080gaacagcctt tataggggct agcttactga ttggtggggg tgctcatgca
gatcaaatgt 1140ttatcgtttg tataatcata atactggtga gcactctata caactagtgg
gacaccaaaa 1200gaatgctaat gtaagtgcgg gttggactta tgaaggtgtc ggttggatcg
caccaacaac 1260aagttcaagc ccagtttacc gtgtgtacaa tccaaatgca ttattacaca
aaaagcaagt 1320atgaagccca aagtttagta aataagggtt ggaaatggga taataacgga
aaggcggtct 1380tctattctgg aggttctcaa gccgtatatg tcgcttataa tcccaatgca
caatctggcg 1440ctcacaatta cacggaaagt agctttgagc aaaatagctt attgaatact
ggttggaaat 1500atggggcagt agcttggtac gggattggag taaaaaacga aatgttaaac
attgctcaaa 1560ttgttagtgg taatttttct agtattgttg gaacttggaa agatacttct
ggaaatatgc 1620ttgaaattaa tgcaatggga aatcttactt taatatggaa aggggcaaag
aatcaaacct 1680ttgaacttgg cgcaggtcaa caatttaatg gaactgcaga tattgcctta
aaaaatggag 1740agatttcccc tggtagtcca cttaacattt ttgttgtacc aacagaagtg
aattcactgg 1800ccgtcgtttt acaacgtcgt gactgggaaa accctggcgt tacccaactt
aatcgccttg 1860cagcacatcc ccctttcgcc agctggcgta atagcgaaga ggcccgcacc
gatcgccctt 1920cccaacagtt gcgcagcctg aatggcgaat ggcgcctgat gcggtatttt
ctccttacgc 1980atctgtgcgg tatttcacac cgcatatggt gcactagaac tagcgattct
gaaatcacca 2040tttaaaaaac tccaatcaaa taattttata aagttagtgt atcactttgt
aatcataaaa 2100acaacaataa agctacttaa atatagattt ataaaaaacg ttggcgaaaa
cgttggcgat 2160tcgttggcga ttgaaaaacc ccttaaaccc ttgagccagt tgggatagag
cgtttttggc 2220acaaaaattg gcactcggca cttaatgggg ggtcgtagta cggaagcaaa
attcgcttcc 2280tttcccccca tttttttcca aattccaaat ttttttcaaa aattttccag
cgctaccgct 2340cggcaaaatt gcaagcaatt tttaaaatca aacccatgag ggaatttcat
tccctcatac 2400tcccttgagc ctcctccaac cgaaatagaa gggcgctgcg cttattattt
cattcagtca 2460tcggctttca taatctaaca gacaacatct tcgctgcaaa gccacgctac
gctcaagggc 2520ttttacgcta cgataacgcc tgttttaacg attatgccga taactaaacg
aaataaacgc 2580taaaacgtct cagaaacgat tttgagacgt tttaataaaa aatcgctagt
ccgaggcctc 2640gacccgattc acaaaaaata ggcacacgaa aaacaagtta agggatgcag
tttatgcatc 2700ccttaactta cttattaaat aatttatagc tattgaaaag agataagaat
tgttcaaagc 2760taatattgtt taaatcgtca attcctgcat gttttaagga attgttaaat
tgattttttg 2820taaatatttt cttgtattct ttgttaaccc atttcataac gaaataatta
tacttttgtt 2880tatctttgtg tgatattctt gatttttttc tacttaatct gataagtgag
ctattcactt 2940taggtttagg atgaaaatat tctcttggaa ccatacttaa tatagaaata
tcaacttctg 3000ccattaaaag taatgccaat gagcgttttg tatttaataa tcttttagca
aacccgtatt 3060ccacgattaa ataaatctca ttagctatac tatcaaaaac aattttgcgt
attatatccg 3120tacttatgtt ataaggtata ttaccatata ttttatagga ttggttttta
ggaaatttaa 3180actgcaatat atccttgttt aaaacttgga aattatcgtg atcaacaagt
ttattttctg 3240tagttttgca taatttatgg tctatttcaa tggcagttac gaaattacac
ctctttacta 3300attcaagggt aaaatggcct tttcctgagc cgatttcaaa gatattatca
tgttcattta 3360atcttatatt tgtcattatt ttatctatat tatgttttga agtaataaag
ttttgactgt 3420gttttatatt tttctcgttc attataaccc tctttaattt ggttatatga
attttgctta 3480ttaacgattc attataacca cttatttttt gtttggttga taatgaactg
tgctgattac 3540aaaaatacta aaaatgccca tattttttcc tccttataaa attagtataa
ttatagcacg 3600ggtcgagatc catgttcttt cctgcgttat cccctgattc tgtggataac
cgtattaccg 3660cctttgagtg agctgatacc gctcgccgca gccgaacgac cgagcgcagc
gagtcagtga 3720gcgaggaagc ggaagagcgc ccaatacgca aaccgcctct ccccgcgcgt
tggccgattc 3780attaatgcag ctggcacgac aggtttcccg actggaaagc gggcagtgag
cgcaacgcaa 3840ttaatgtgag ttagctcact cattaggcac cccaggcttt acactttatg
cttccggctc 3900gtatgttgtg tggaattgtg agcggataac aatttcacac aggaaacagc
tatgaccatg 3960attacgccaa gcttgcatgc ctgcaggtcg actctagagg atcctatata
caattgagca 4020aaagaaattt agttattaaa ttaccagctg gagttcctcc aatggttgta
gattcactaa 4080gtccagcaat tatttcaatg gtgattttct gtttgatgtt cgggattcgt
gtgggattct 4140cttatacgcc attccatgat attttcaatt tctcaacaca actaattcaa
gcaccgttga 4200ctggtgctgt ggcaaatcca tgggttctta tgggcatctt tacctttggt
aatttcttat 4260ggttctttgg tatccaccct aatttaattg ggggaatttt aaatccattg
ttattaacaa 4320tgtcatatgc taatattgat gcctatgctg ccggaaaacc tgtaccatac
ttacaaatga 4380tgattgtgtt tgctgtgggt gcgaacgcat ggggcggaag tggaaatact
tatgggttag 4440ttatttcaat gtttacggca aaatctgaac gctataaaca attattaaaa
ttaggtgcaa 4500ttcctagtat tttcaatatc agtgaaccat tactttttgg tcttccaatg
atgttaaatc 4560ctcttttctt tattcctttg gttttccaac cagcaatttt aggaactgta
gcattgggct 4620tggcaaagat attatatatt acaaatctga atccaatgac ggcacttctt
ccttggacga 4680caccagcacc tgtgagaatg gccatttcag gtggacttcc atttttgatt
atttttgcaa 4740tctgtttagt cttgaatgtt cttatttact acccattctt taaggtggcg
tataataaag 4800ctttagaaga agaaaaagca gctgttgaat tagagggttc agaaactgcc
tgatggatat 4860tttttataaa tctggtttga acaaattata ttgacatctc tttttctatc
ctgataattc 4920tgagaggtta ttttgggaaa tactattgaa ccatatcgag gtgtgtggta
taatgaaggg 4980aattaaaaaa gataggaa
4998244784DNAArtificial SequencepOThy12 24gggttcagaa
actgcctgat ggatattttt tataaatctg gtttgaacaa attatattga 60catctctttt
tctatcctga taattctgag aggttatttt gggaaatact attgaaccat 120atcgaggtgt
gtggtataat gaagggaatt aaaaaagata ggaaaatttc atgaaaaaaa 180agattatctc
agctatttta atgtctacag tcatactttc tgctgcagcc ccgttgtcag 240gtgtttacgc
ctcagctggt caaggtactc aatcagaaaa ctcatgtact cactttccag 300gtaacttgcc
aaacatgctt cgtgatttgc gtgatgcttt ttcacgtgtt aaaacttttt 360ttcaaatgaa
agatcaactt gataacttgc ttttgaaaga atcacttttg gaagatttta 420aaggttacct
tggttgtcaa gctttgtcag aaatgatcca attttacctt gaagaagtta 480tgccacaagc
tgaaaaccaa gatccagata tcaaagctca cgttaactca ttgggtgaaa 540accttaaaac
tttgcgtctt cgtttgcgtc gttgtcaccg ttttcttcca tgtgaaaaca 600aatcaaaagc
tgttgaacaa gttaaaaacg cttttaacaa attgcaagaa aaaggtatct 660acaaagctat
gtcagaattt gatatcttta tcaactacat cgaagcttac atgactatga 720aaatccgtaa
ctaactagaa ttaatctata agttactgac aaaactgtca gtaacttttt 780ttgtgggaaa
aatgtatttt tatgaccgta aagaatctgt cagtagaagt ctgaaattcg 840tttaaaaatc
gactagaata ggctttaacg acaagatgtt ttaaagagta cgctctaaat 900gtatttttgt
atttttgttt gattacgaag tttaaattta attgacaaat gttttaaaat 960gagtataata
ggacttgtaa ccgattttat ttttataaag gagaaagaaa gatgaacaaa 1020cttttacttg
gaacagcctt tataggggct agcttactga ttggtggggg tgctcatgca 1080gatcaaatgt
ttatcgtttg tataatcata atactggtga gcactctata caactagtgg 1140gacaccaaaa
gaatgctaat gtaagtgcgg gttggactta tgaaggtgtc ggttggatcg 1200caccaacaac
aagttcaagc ccagtttacc gtgtgtacaa tccaaatgca ttattacaca 1260aaaagcaagt
atgaagccca aagtttagta aataagggtt ggaaatggga taataacgga 1320aaggcggtct
tctattctgg aggttctcaa gccgtatatg tcgcttataa tcccaatgca 1380caatctggcg
ctcacaatta cacggaaagt agctttgagc aaaatagctt attgaatact 1440ggttggaaat
atggggcagt agcttggtac gggattggag taaaaaacga aatgttaaac 1500attgctcaaa
ttgttagtgg taatttttct agtattgttg gaacttggaa agatacttct 1560ggaaatatgc
ttgaaattaa tgcaatggga aatcttactt taatatggaa aggggcaaag 1620aatcaaacct
ttgaacttgg cgcaggtcaa caatttaatg gaactgcaga tattgcctta 1680aaaaatggag
agatttcccc tggtagtcca cttaacattt ttgttgtacc aacagaagtg 1740aattcactgg
ccgtcgtttt acaacgtcgt gactgggaaa accctggcgt tacccaactt 1800aatcgccttg
cagcacatcc ccctttcgcc agctggcgta atagcgaaga ggcccgcacc 1860gatcgccctt
cccaacagtt gcgcagcctg aatggcgaat ggcgcctgat gcggtatttt 1920ctccttacgc
atctgtgcgg tatttcacac cgcatatggt gcactagaac tagcgattct 1980gaaatcacca
tttaaaaaac tccaatcaaa taattttata aagttagtgt atcactttgt 2040aatcataaaa
acaacaataa agctacttaa atatagattt ataaaaaacg ttggcgaaaa 2100cgttggcgat
tcgttggcga ttgaaaaacc ccttaaaccc ttgagccagt tgggatagag 2160cgtttttggc
acaaaaattg gcactcggca cttaatgggg ggtcgtagta cggaagcaaa 2220attcgcttcc
tttcccccca tttttttcca aattccaaat ttttttcaaa aattttccag 2280cgctaccgct
cggcaaaatt gcaagcaatt tttaaaatca aacccatgag ggaatttcat 2340tccctcatac
tcccttgagc ctcctccaac cgaaatagaa gggcgctgcg cttattattt 2400cattcagtca
tcggctttca taatctaaca gacaacatct tcgctgcaaa gccacgctac 2460gctcaagggc
ttttacgcta cgataacgcc tgttttaacg attatgccga taactaaacg 2520aaataaacgc
taaaacgtct cagaaacgat tttgagacgt tttaataaaa aatcgctagt 2580ccgaggcctc
gacccgattc acaaaaaata ggcacacgaa aaacaagtta agggatgcag 2640tttatgcatc
ccttaactta cttattaaat aatttatagc tattgaaaag agataagaat 2700tgttcaaagc
taatattgtt taaatcgtca attcctgcat gttttaagga attgttaaat 2760tgattttttg
taaatatttt cttgtattct ttgttaaccc atttcataac gaaataatta 2820tacttttgtt
tatctttgtg tgatattctt gatttttttc tacttaatct gataagtgag 2880ctattcactt
taggtttagg atgaaaatat tctcttggaa ccatacttaa tatagaaata 2940tcaacttctg
ccattaaaag taatgccaat gagcgttttg tatttaataa tcttttagca 3000aacccgtatt
ccacgattaa ataaatctca ttagctatac tatcaaaaac aattttgcgt 3060attatatccg
tacttatgtt ataaggtata ttaccatata ttttatagga ttggttttta 3120ggaaatttaa
actgcaatat atccttgttt aaaacttgga aattatcgtg atcaacaagt 3180ttattttctg
tagttttgca taatttatgg tctatttcaa tggcagttac gaaattacac 3240ctctttacta
attcaagggt aaaatggcct tttcctgagc cgatttcaaa gatattatca 3300tgttcattta
atcttatatt tgtcattatt ttatctatat tatgttttga agtaataaag 3360ttttgactgt
gttttatatt tttctcgttc attataaccc tctttaattt ggttatatga 3420attttgctta
ttaacgattc attataacca cttatttttt gtttggttga taatgaactg 3480tgctgattac
aaaaatacta aaaatgccca tattttttcc tccttataaa attagtataa 3540ttatagcacg
ggtcgagatc catgttcttt cctgcgttat cccctgattc tgtggataac 3600cgtattaccg
cctttgagtg agctgatacc gctcgccgca gccgaacgac cgagcgcagc 3660gagtcagtga
gcgaggaagc ggaagagcgc ccaatacgca aaccgcctct ccccgcgcgt 3720tggccgattc
attaatgcag ctggcacgac aggtttcccg actggaaagc gggcagtgag 3780cgcaacgcaa
ttaatgtgag ttagctcact cattaggcac cccaggcttt acactttatg 3840cttccggctc
gtatgttgtg tggaattgtg agcggataac aatttcacac aggaaacagc 3900tatgaccatg
attacgccaa gcttgcatgc ctgcaggtcg actctagagg atcctatata 3960caattgagca
aaagaaattt agttattaaa ttaccagctg gagttcctcc aatggttgta 4020gattcactaa
gtccagcaat tatttcaatg gtgattttct gtttgatgtt cgggattcgt 4080gtgggattct
cttatacgcc attccatgat attttcaatt tctcaacaca actaattcaa 4140gcaccgttga
ctggtgctgt ggcaaatcca tgggttctta tgggcatctt tacctttggt 4200aatttcttat
ggttctttgg tatccaccct aatttaattg ggggaatttt aaatccattg 4260ttattaacaa
tgtcatatgc taatattgat gcctatgctg ccggaaaacc tgtaccatac 4320ttacaaatga
tgattgtgtt tgctgtgggt gcgaacgcat ggggcggaag tggaaatact 4380tatgggttag
ttatttcaat gtttacggca aaatctgaac gctataaaca attattaaaa 4440ttaggtgcaa
ttcctagtat tttcaatatc agtgaaccat tactttttgg tcttccaatg 4500atgttaaatc
ctcttttctt tattcctttg gttttccaac cagcaatttt aggaactgta 4560gcattgggct
tggcaaagat attatatatt acaaatctga atccaatgac ggcacttctt 4620ccttggacga
caccagcacc tgtgagaatg gccatttcag gtggacttcc atttttgatt 4680atttttgcaa
tctgtttagt cttgaatgtt cttatttact acccattctt taaggtggcg 4740tataataaag
ctttagaaga agaaaaagca gctgttgaat taga
4784254936DNAArtificial SequencepOThy15 25gattaagtca tcttacctct
tttattagtt ttttcttata atctaatgat aacattttta 60taattaatct ataaaccata
tccctctttg gaatcaaaat ttattatcta ctcctttgta 120gatatgttat aatacaagta
tcagatctgg gagaccacaa cggtttccca ctagaaataa 180ttttgtttaa ctttagaaag
gagatatacg catgaaaaaa aagattatct cagctatttt 240aatgtctaca gtcatacttt
ctgctgcagc cccgttgtca ggtgtttacg cctcagctgg 300tcaaggtact caatcagaaa
actcatgtac tcactttcca ggtaacttgc caaacatgct 360tcgtgatttg cgtgatgctt
tttcacgtgt taaaactttt tttcaaatga aagatcaact 420tgataacttg cttttgaaag
aatcactttt ggaagatttt aaaggttacc ttggttgtca 480agctttgtca gaaatgatcc
aattttacct tgaagaagtt atgccacaag ctgaaaacca 540agatccagat atcaaagctc
acgttaactc attgggtgaa aaccttaaaa ctttgcgtct 600tcgtttgcgt cgttgtcacc
gttttcttcc atgtgaaaac aaatcaaaag ctgttgaaca 660agttaaaaac gcttttaaca
aattgcaaga aaaaggtatc tacaaagcta tgtcagaatt 720tgatatcttt atcaactaca
tcgaagctta catgactatg aaaatccgta actaactaga 780attaatctat aagttactga
caaaactgtc agtaactttt tttgtgggaa aaatgtattt 840ttatgaccgt aaagaatctg
tcagtagaag tctgaaattc gtttaaaaat cgactagaat 900aggctttaac gacaagatgt
tttaaagagt acgctctaaa tgtatttttg tatttttgtt 960tgattacgaa gtttaaattt
aattgacaaa tgttttaaaa tgagtataat aggacttgta 1020accgatttta tttttataaa
ggagaaagaa agatgaacaa acttttactt ggaacagcct 1080ttataggggc tagcttactg
attggtgggg gtgctcatgc agatcaaatg tttatcgttt 1140gtataatcat aatactggtg
agcactctat acaactagtg ggacaccaaa agaatgctaa 1200tgtaagtgcg ggttggactt
atgaaggtgt cggttggatc gcaccaacaa caagttcaag 1260cccagtttac cgtgtgtaca
atccaaatgc attattacac aaaaagcaag tatgaagccc 1320aaagtttagt aaataagggt
tggaaatggg ataataacgg aaaggcggtc ttctattctg 1380gaggttctca agccgtatat
gtcgcttata atcccaatgc acaatctggc gctcacaatt 1440acacggaaag tagctttgag
caaaatagct tattgaatac tggttggaaa tatggggcag 1500tagcttggta cgggattgga
gtaaaaaacg aaatgttaaa cattgctcaa attgttagtg 1560gtaatttttc tagtattgtt
ggaacttgga aagatacttc tggaaatatg cttgaaatta 1620atgcaatggg aaatcttact
ttaatatgga aaggggcaaa gaatcaaacc tttgaacttg 1680gcgcaggtca acaatttaat
ggaactgcag atattgcctt aaaaaatgga gagatttccc 1740ctggtagtcc acttaacatt
tttgttgtac caacagaagt gaattcactg gccgtcgttt 1800tacaacgtcg tgactgggaa
aaccctggcg ttacccaact taatcgcctt gcagcacatc 1860cccctttcgc cagctggcgt
aatagcgaag aggcccgcac cgatcgccct tcccaacagt 1920tgcgcagcct gaatggcgaa
tggcgcctga tgcggtattt tctccttacg catctgtgcg 1980gtatttcaca ccgcatatgg
tgcactagaa ctagcgattc tgaaatcacc atttaaaaaa 2040ctccaatcaa ataattttat
aaagttagtg tatcactttg taatcataaa aacaacaata 2100aagctactta aatatagatt
tataaaaaac gttggcgaaa acgttggcga ttcgttggcg 2160attgaaaaac cccttaaacc
cttgagccag ttgggataga gcgtttttgg cacaaaaatt 2220ggcactcggc acttaatggg
gggtcgtagt acggaagcaa aattcgcttc ctttcccccc 2280atttttttcc aaattccaaa
tttttttcaa aaattttcca gcgctaccgc tcggcaaaat 2340tgcaagcaat ttttaaaatc
aaacccatga gggaatttca ttccctcata ctcccttgag 2400cctcctccaa ccgaaataga
agggcgctgc gcttattatt tcattcagtc atcggctttc 2460ataatctaac agacaacatc
ttcgctgcaa agccacgcta cgctcaaggg cttttacgct 2520acgataacgc ctgttttaac
gattatgccg ataactaaac gaaataaacg ctaaaacgtc 2580tcagaaacga ttttgagacg
ttttaataaa aaatcgctag tccgaggcct cgacccgatt 2640cacaaaaaat aggcacacga
aaaacaagtt aagggatgca gtttatgcat cccttaactt 2700acttattaaa taatttatag
ctattgaaaa gagataagaa ttgttcaaag ctaatattgt 2760ttaaatcgtc aattcctgca
tgttttaagg aattgttaaa ttgatttttt gtaaatattt 2820tcttgtattc tttgttaacc
catttcataa cgaaataatt atacttttgt ttatctttgt 2880gtgatattct tgattttttt
ctacttaatc tgataagtga gctattcact ttaggtttag 2940gatgaaaata ttctcttgga
accatactta atatagaaat atcaacttct gccattaaaa 3000gtaatgccaa tgagcgtttt
gtatttaata atcttttagc aaacccgtat tccacgatta 3060aataaatctc attagctata
ctatcaaaaa caattttgcg tattatatcc gtacttatgt 3120tataaggtat attaccatat
attttatagg attggttttt aggaaattta aactgcaata 3180tatccttgtt taaaacttgg
aaattatcgt gatcaacaag tttattttct gtagttttgc 3240ataatttatg gtctatttca
atggcagtta cgaaattaca cctctttact aattcaaggg 3300taaaatggcc ttttcctgag
ccgatttcaa agatattatc atgttcattt aatcttatat 3360ttgtcattat tttatctata
ttatgttttg aagtaataaa gttttgactg tgttttatat 3420ttttctcgtt cattataacc
ctctttaatt tggttatatg aattttgctt attaacgatt 3480cattataacc acttattttt
tgtttggttg ataatgaact gtgctgatta caaaaatact 3540aaaaatgccc atattttttc
ctccttataa aattagtata attatagcac gggtcgagat 3600ccatgttctt tcctgcgtta
tcccctgatt ctgtggataa ccgtattacc gcctttgagt 3660gagctgatac cgctcgccgc
agccgaacga ccgagcgcag cgagtcagtg agcgaggaag 3720cggaagagcg cccaatacgc
aaaccgcctc tccccgcgcg ttggccgatt cattaatgca 3780gctggcacga caggtttccc
gactggaaag cgggcagtga gcgcaacgca attaatgtga 3840gttagctcac tcattaggca
ccccaggctt tacactttat gcttccggct cgtatgttgt 3900gtggaattgt gagcggataa
caatttcaca caggaaacag ctatgaccat gattacgcca 3960agcttgcatg cctgcaggtc
gactctagag gatcctatat acaattgagc aaaagaaatt 4020tagttattaa attaccagct
ggagttcctc caatggttgt agattcacta agtccagcaa 4080ttatttcaat ggtgattttc
tgtttgatgt tcgggattcg tgtgggattc tcttatacgc 4140cattccatga tattttcaat
ttctcaacac aactaattca agcaccgttg actggtgctg 4200tggcaaatcc atgggttctt
atgggcatct ttacctttgg taatttctta tggttctttg 4260gtatccaccc taatttaatt
gggggaattt taaatccatt gttattaaca atgtcatatg 4320ctaatattga tgcctatgct
gccggaaaac ctgtaccata cttacaaatg atgattgtgt 4380ttgctgtggg tgcgaacgca
tggggcggaa gtggaaatac ttatgggtta gttatttcaa 4440tgtttacggc aaaatctgaa
cgctataaac aattattaaa attaggtgca attcctagta 4500ttttcaatat cagtgaacca
ttactttttg gtcttccaat gatgttaaat cctcttttct 4560ttattccttt ggttttccaa
ccagcaattt taggaactgt agcattgggc ttggcaaaga 4620tattatatat tacaaatctg
aatccaatga cggcacttct tccttggacg acaccagcac 4680ctgtgagaat ggccatttca
ggtggacttc catttttgat tatttttgca atctgtttag 4740tcttgaatgt tcttatttac
tacccattct ttaaggtggc gtataataaa gctttagaag 4800aagaaaaagc agctgttgaa
ttagagggtt cagaaactgc ctgatggata ttttttataa 4860atctggtttg aacaaattat
attgacatct ctttttctat cctgataatt ctgagaggtt 4920attttgggaa atacta
4936264995DNAArtificial
SequencepOThy16 26aatttcgatt aagtcatctt acctctttta ttagtttttt cttataatct
aatgataaca 60tttttataat taatctataa accatatccc tctttggaat caaaatttat
tatctactcc 120tttgtagata tgttataata caagtatcag atctgggaga ccacaacggt
ttcccactag 180aaataatttt gtttaacttt agaaaggaga tatacgcatg aaaaaaaaga
ttatctcagc 240tattttaatg tctacagtca tactttctgc tgcagccccg ttgtcaggtg
tttacgcctc 300agctggtcaa ggtactcaat cagaaaactc atgtactcac tttccaggta
acttgccaaa 360catgcttcgt gatttgcgtg atgctttttc acgtgttaaa actttttttc
aaatgaaaga 420tcaacttgat aacttgcttt tgaaagaatc acttttggaa gattttaaag
gttaccttgg 480ttgtcaagct ttgtcagaaa tgatccaatt ttaccttgaa gaagttatgc
cacaagctga 540aaaccaagat ccagatatca aagctcacgt taactcattg ggtgaaaacc
ttaaaacttt 600gcgtcttcgt ttgcgtcgtt gtcaccgttt tcttccatgt gaaaacaaat
caaaagctgt 660tgaacaagtt aaaaacgctt ttaacaaatt gcaagaaaaa ggtatctaca
aagctatgtc 720agaatttgat atctttatca actacatcga agcttacatg actatgaaaa
tccgtaacta 780actagaatta atctataagt tactgacaaa actgtcagta actttttttg
tgggaaaaat 840gtatttttat gaccgtaaag aatctgtcag tagaagtctg aaattcgttt
aaaaatcgac 900tagaataggc tttaacgaca agatgtttta aagagtacgc tctaaatgta
tttttgtatt 960tttgtttgat tacgaagttt aaatttaatt gacaaatgtt ttaaaatgag
tataatagga 1020cttgtaaccg attttatttt tataaaggag aaagaaagat gaacaaactt
ttacttggaa 1080cagcctttat aggggctagc ttactgattg gtgggggtgc tcatgcagat
caaatgttta 1140tcgtttgtat aatcataata ctggtgagca ctctatacaa ctagtgggac
accaaaagaa 1200tgctaatgta agtgcgggtt ggacttatga aggtgtcggt tggatcgcac
caacaacaag 1260ttcaagccca gtttaccgtg tgtacaatcc aaatgcatta ttacacaaaa
agcaagtatg 1320aagcccaaag tttagtaaat aagggttgga aatgggataa taacggaaag
gcggtcttct 1380attctggagg ttctcaagcc gtatatgtcg cttataatcc caatgcacaa
tctggcgctc 1440acaattacac ggaaagtagc tttgagcaaa atagcttatt gaatactggt
tggaaatatg 1500gggcagtagc ttggtacggg attggagtaa aaaacgaaat gttaaacatt
gctcaaattg 1560ttagtggtaa tttttctagt attgttggaa cttggaaaga tacttctgga
aatatgcttg 1620aaattaatgc aatgggaaat cttactttaa tatggaaagg ggcaaagaat
caaacctttg 1680aacttggcgc aggtcaacaa tttaatggaa ctgcagatat tgccttaaaa
aatggagaga 1740tttcccctgg tagtccactt aacatttttg ttgtaccaac agaagtgaat
tcactggccg 1800tcgttttaca acgtcgtgac tgggaaaacc ctggcgttac ccaacttaat
cgccttgcag 1860cacatccccc tttcgccagc tggcgtaata gcgaagaggc ccgcaccgat
cgcccttccc 1920aacagttgcg cagcctgaat ggcgaatggc gcctgatgcg gtattttctc
cttacgcatc 1980tgtgcggtat ttcacaccgc atatggtgca ctagaactag cgattctgaa
atcaccattt 2040aaaaaactcc aatcaaataa ttttataaag ttagtgtatc actttgtaat
cataaaaaca 2100acaataaagc tacttaaata tagatttata aaaaacgttg gcgaaaacgt
tggcgattcg 2160ttggcgattg aaaaacccct taaacccttg agccagttgg gatagagcgt
ttttggcaca 2220aaaattggca ctcggcactt aatggggggt cgtagtacgg aagcaaaatt
cgcttccttt 2280ccccccattt ttttccaaat tccaaatttt tttcaaaaat tttccagcgc
taccgctcgg 2340caaaattgca agcaattttt aaaatcaaac ccatgaggga atttcattcc
ctcatactcc 2400cttgagcctc ctccaaccga aatagaaggg cgctgcgctt attatttcat
tcagtcatcg 2460gctttcataa tctaacagac aacatcttcg ctgcaaagcc acgctacgct
caagggcttt 2520tacgctacga taacgcctgt tttaacgatt atgccgataa ctaaacgaaa
taaacgctaa 2580aacgtctcag aaacgatttt gagacgtttt aataaaaaat cgctagtccg
aggcctcgac 2640ccgattcaca aaaaataggc acacgaaaaa caagttaagg gatgcagttt
atgcatccct 2700taacttactt attaaataat ttatagctat tgaaaagaga taagaattgt
tcaaagctaa 2760tattgtttaa atcgtcaatt cctgcatgtt ttaaggaatt gttaaattga
ttttttgtaa 2820atattttctt gtattctttg ttaacccatt tcataacgaa ataattatac
ttttgtttat 2880ctttgtgtga tattcttgat ttttttctac ttaatctgat aagtgagcta
ttcactttag 2940gtttaggatg aaaatattct cttggaacca tacttaatat agaaatatca
acttctgcca 3000ttaaaagtaa tgccaatgag cgttttgtat ttaataatct tttagcaaac
ccgtattcca 3060cgattaaata aatctcatta gctatactat caaaaacaat tttgcgtatt
atatccgtac 3120ttatgttata aggtatatta ccatatattt tataggattg gtttttagga
aatttaaact 3180gcaatatatc cttgtttaaa acttggaaat tatcgtgatc aacaagttta
ttttctgtag 3240ttttgcataa tttatggtct atttcaatgg cagttacgaa attacacctc
tttactaatt 3300caagggtaaa atggcctttt cctgagccga tttcaaagat attatcatgt
tcatttaatc 3360ttatatttgt cattatttta tctatattat gttttgaagt aataaagttt
tgactgtgtt 3420ttatattttt ctcgttcatt ataaccctct ttaatttggt tatatgaatt
ttgcttatta 3480acgattcatt ataaccactt attttttgtt tggttgataa tgaactgtgc
tgattacaaa 3540aatactaaaa atgcccatat tttttcctcc ttataaaatt agtataatta
tagcacgggt 3600cgagatccat gttctttcct gcgttatccc ctgattctgt ggataaccgt
attaccgcct 3660ttgagtgagc tgataccgct cgccgcagcc gaacgaccga gcgcagcgag
tcagtgagcg 3720aggaagcgga agagcgccca atacgcaaac cgcctctccc cgcgcgttgg
ccgattcatt 3780aatgcagctg gcacgacagg tttcccgact ggaaagcggg cagtgagcgc
aacgcaatta 3840atgtgagtta gctcactcat taggcacccc aggctttaca ctttatgctt
ccggctcgta 3900tgttgtgtgg aattgtgagc ggataacaat ttcacacagg aaacagctat
gaccatgatt 3960acgccaagct tgcatgcctg caggtcgact ctagaggatc ctatatacaa
ttgagcaaaa 4020gaaatttagt tattaaatta ccagctggag ttcctccaat ggttgtagat
tcactaagtc 4080cagcaattat ttcaatggtg attttctgtt tgatgttcgg gattcgtgtg
ggattctctt 4140atacgccatt ccatgatatt ttcaatttct caacacaact aattcaagca
ccgttgactg 4200gtgctgtggc aaatccatgg gttcttatgg gcatctttac ctttggtaat
ttcttatggt 4260tctttggtat ccaccctaat ttaattgggg gaattttaaa tccattgtta
ttaacaatgt 4320catatgctaa tattgatgcc tatgctgccg gaaaacctgt accatactta
caaatgatga 4380ttgtgtttgc tgtgggtgcg aacgcatggg gcggaagtgg aaatacttat
gggttagtta 4440tttcaatgtt tacggcaaaa tctgaacgct ataaacaatt attaaaatta
ggtgcaattc 4500ctagtatttt caatatcagt gaaccattac tttttggtct tccaatgatg
ttaaatcctc 4560ttttctttat tcctttggtt ttccaaccag caattttagg aactgtagca
ttgggcttgg 4620caaagatatt atatattaca aatctgaatc caatgacggc acttcttcct
tggacgacac 4680cagcacctgt gagaatggcc atttcaggtg gacttccatt tttgattatt
tttgcaatct 4740gtttagtctt gaatgttctt atttactacc cattctttaa ggtggcgtat
aataaagctt 4800tagaagaaga aaaagcagct gttgaattag agggttcaga aactgcctga
tggatatttt 4860ttataaatct ggtttgaaca aattatattg acatctcttt ttctatcctg
ataattctga 4920gaggttattt tgggaaatac tattgaacca tatcgaggtg tgtggtataa
tgaagggaat 4980taaaaaagat aggaa
49952739DNAArtificial Sequencelactococcal P1 promoter
expression unit 27agataggaaa atttcatgac ttacgcagat caagttttt
392836DNAArtificial Sequencelactococcal P1 promoter with no
5' ATG 28agataggaaa atttcactta cgcagatcaa gttttt
362989DNAArtificial SequencethyA promoter not included 29tctgagaggt
tattttggga aatactattg aaccatatcg aggtgtgtgg tataatgaag 60ggaattaaaa
aagataggaa aatttcatg
893020DNAArtificial Sequence3' SpeI restriction site 30aaaatccgta
actaactagt
203135DNAArtificial Sequencestop codon of usp45-hIL-10 sequence
31gatttagcaa tttaaattaa attaatctat aagtt
353226DNAArtificial Sequenceengineered XbaI restriction site 32tctagaatta
atctataagt tactga 26
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